AlfalfaGEDB Alfalfa Gene Editing Database

M. sativa cultivar zhongmu-4 / Msa1310620


Query id Subject id identity % alignment length mismatches gap openings q. start q. end s. start s. end e-value bit score
Msa1310620 MtrunA17_Chr8g0337611 98.177 384 7 0 1 384 49 432 0.0 783
Msa1310620 MtrunA17_Chr4g0003121 35.955 267 160 8 113 372 113 375 4.69e-43 154
Msa1310620 MtrunA17_Chr2g0324141 24.161 298 171 10 129 384 28 312 5.80e-16 78.2
Msa1310620 MtrunA17_Chr5g0423381 21.678 286 176 8 125 382 74 339 7.11e-12 66.2
Query id Subject id identity % alignment length mismatches gap openings q. start q. end s. start s. end e-value bit score
Msa1310620 AT4G12830.1 69.744 390 104 3 5 382 2 389 0.0 562
Msa1310620 AT1G52510.1 35.556 270 157 9 113 372 110 372 1.32e-41 150
Msa1310620 AT1G52510.2 36.199 221 127 7 159 372 15 228 9.79e-32 120
Msa1310620 AT5G19850.1 22.917 288 180 8 120 382 88 358 7.15e-15 75.9

Find 110 sgRNAs with CRISPR-Local

Find 286 sgRNAs with CRISPR-GE


CRISPR-Local

CRISPR-Local
sgRNA_sequence on_target_score Position Region
ATGATATTGCATTTAAAATT+AGG 0.149079 8_4:+7216909 Msa1310620:three_prime_UTR
GAACTTGGACAACTTATTTA+TGG 0.150873 8_4:+7216721 Msa1310620:CDS
GACATTTCCCTATCCAAATT+TGG 0.151833 8_4:-7216950 None:intergenic
CAGATATTCAAATCCAAATT+TGG 0.181049 8_4:+7216937 Msa1310620:three_prime_UTR
AAGCTACCGGCGATCGTTTC+AGG 0.185171 8_4:+7213128 Msa1310620:CDS
GATAAGCCTCAACCTAAATA+TGG 0.204931 8_4:+7213965 Msa1310620:CDS
CACCTTTAGGTCTTTCTTCA+TGG 0.215656 8_4:-7214937 None:intergenic
TAGGTCTTTCTTCATGGTTC+TGG 0.240612 8_4:-7214931 None:intergenic
GCTTTGTCACTGGCCCTTAA+TGG 0.256586 8_4:-7214804 None:intergenic
TTGGAACTTCAATAAGCTTA+TGG 0.259244 8_4:-7215249 None:intergenic
AATCTTCTCCTGGTGTTTGC+TGG 0.286979 8_4:-7214340 None:intergenic
GTGTAGTCAAACCCATATTT+AGG 0.295962 8_4:-7213977 None:intergenic
GTTAAAGCTTATTCAATTCC+TGG 0.300530 8_4:+7213049 Msa1310620:CDS
CCACAAAGCGTTTCCTTTCA+AGG 0.305182 8_4:+7212226 Msa1310620:CDS
AAACCATCACCAACAGAAAT+AGG 0.308975 8_4:-7212383 None:intergenic
TTCTTATCGCAAAGTTCTTC+CGG 0.338122 8_4:+7213546 Msa1310620:CDS
CTGGCATACTTAACTACAAC+TGG 0.368426 8_4:-7214321 None:intergenic
GGGTTTGACTACACCCTTGA+TGG 0.373118 8_4:+7213986 Msa1310620:CDS
TGTTCGAACCACCGTATGTT+GGG 0.374180 8_4:+7215168 Msa1310620:CDS
AGAAGACCCTATCTCATATC+TGG 0.388030 8_4:+7214879 Msa1310620:CDS
GCTTATTCAATTCCTGGAAC+TGG 0.388136 8_4:+7213055 Msa1310620:CDS
TGAGTGTTTAGGATCCATTA+AGG 0.388171 8_4:+7214790 Msa1310620:intron
GAAAGAAGTGGTAGTTTGTT+TGG 0.395699 8_4:-7212134 None:intergenic
AGACAATGTAGGTGGAAGTT+TGG 0.397564 8_4:-7214652 None:intergenic
CTGAACTGTAGTACTTCAAA+TGG 0.399768 8_4:+7212261 Msa1310620:CDS
TGGTAGTTTGTTTGGTTGGT+TGG 0.402147 8_4:-7212126 None:intergenic
TGAGGAGCCAGATATGAGAT+AGG 0.403625 8_4:-7214886 None:intergenic
ATGGTTTAAGCAAGGGAAAA+TGG 0.404912 8_4:+7212566 Msa1310620:CDS
ACAACATAAACAAATATGTT+TGG 0.406958 8_4:-7216871 None:intergenic
GCTTGTCAGTGCTTTGTCAC+TGG 0.410366 8_4:-7214814 None:intergenic
CTGGATGCTCCTATTTCTGT+TGG 0.413992 8_4:+7212374 Msa1310620:CDS
TGCTTAAACCATTCATCACT+TGG 0.420796 8_4:-7212555 None:intergenic
CCTTGAAAGGAAACGCTTTG+TGG 0.424241 8_4:-7212226 None:intergenic
AGGTGGAAGTTTGGCATGTT+GGG 0.427743 8_4:-7214643 None:intergenic
TTGCACAACAAGTGAGACTT+TGG 0.432432 8_4:-7214198 None:intergenic
GAAGTGGTAGTTTGTTTGGT+TGG 0.434708 8_4:-7212130 None:intergenic
TATCTCATATCTGGCTCCTC+AGG 0.436139 8_4:+7214888 Msa1310620:CDS
AATCCATGGTTTCCCTTCAC+AGG 0.438753 8_4:+7213440 Msa1310620:CDS
TGTTACGGCGCGATAGTCCT+TGG 0.439215 8_4:-7213575 None:intergenic
GCTTCAGAGTCTTCCTTGAA+AGG 0.446245 8_4:-7212239 None:intergenic
ATCGCGCCGTAACATTTGAT+TGG 0.446745 8_4:+7213584 Msa1310620:CDS
GCTCCTATTTCTGTTGGTGA+TGG 0.453847 8_4:+7212380 Msa1310620:CDS
AACCATTCATCACTTGGATT+AGG 0.456785 8_4:-7212549 None:intergenic
AACTTCAATAAGCTTATGGT+TGG 0.461173 8_4:-7215245 None:intergenic
GCTGCAGGATGATTATCTTC+TGG 0.462577 8_4:+7212355 Msa1310620:intron
ATTCAAATCCAAATTTGGAT+AGG 0.466262 8_4:+7216942 Msa1310620:three_prime_UTR
TTAAGTTGTTAATCTTCTCC+TGG 0.467916 8_4:-7214350 None:intergenic
GAAGATTGCGGCGAAGAACT+TGG 0.471562 8_4:+7216706 Msa1310620:CDS
ATTGTGTTTGAATATATACT+TGG 0.474533 8_4:-7216843 None:intergenic
GAGTGTTTAGGATCCATTAA+GGG 0.475394 8_4:+7214791 Msa1310620:intron
TCAAACCCATATTTAGGTTG+AGG 0.477709 8_4:-7213971 None:intergenic
TTCAAATCCAAATTTGGATA+GGG 0.488406 8_4:+7216943 Msa1310620:three_prime_UTR
AGAACCATGAAAAGCTTGAA+TGG 0.488443 8_4:-7212166 None:intergenic
ATAAGCCTCAACCTAAATAT+GGG 0.489599 8_4:+7213966 Msa1310620:CDS
GGTTGGTTGGAGAGTGAAGA+GGG 0.490676 8_4:-7212113 None:intergenic
ATCTCTCTGGCCCCAACATA+CGG 0.494352 8_4:-7215179 None:intergenic
CAATACTAAAGGACAAAAGT+TGG 0.502637 8_4:+7215143 Msa1310620:CDS
AAGAAGATTGAAGGTGGGGA+TGG 0.505862 8_4:-7212203 None:intergenic
ATATTTCCTTCAGAGGTATG+TGG 0.509867 8_4:+7215108 Msa1310620:intron
CAAATGAAACTCACCTGTGA+AGG 0.512957 8_4:-7213453 None:intergenic
AGCTCAACCAGCGATCTCTC+TGG 0.519566 8_4:-7215192 None:intergenic
ACCTAGCCAATCAAATGTTA+CGG 0.522106 8_4:-7213590 None:intergenic
TAAACAGGAAAATATTCAGA+TGG 0.522423 8_4:+7212525 Msa1310620:intron
CACACAAGCAATTACCATCA+AGG 0.528864 8_4:-7214000 None:intergenic
AACCATGAAGAAAGACCTAA+AGG 0.534883 8_4:+7214935 Msa1310620:CDS
TGTGGAAGAAGATTGAAGGT+GGG 0.535711 8_4:-7212208 None:intergenic
GGCCTAATCCAAGTGATGAA+TGG 0.538010 8_4:+7212547 Msa1310620:CDS
GTGATGAATGGTTTAAGCAA+GGG 0.543761 8_4:+7212559 Msa1310620:CDS
TAGGTGGAAGTTTGGCATGT+TGG 0.548269 8_4:-7214644 None:intergenic
GGATATGCAAACAATACTAA+AGG 0.550936 8_4:+7215132 Msa1310620:CDS
CCTTCAGTGATATTAATCCA+TGG 0.554816 8_4:+7213426 Msa1310620:CDS
AATATATACTTGGCCTACAC+AGG 0.555459 8_4:-7216833 None:intergenic
GGTGATGGTTTCTCTTTCAG+TGG 0.555932 8_4:+7212395 Msa1310620:CDS
GCTTTGTGGAAGAAGATTGA+AGG 0.557911 8_4:-7212212 None:intergenic
ATATTCAGCAACTTTCTGCT+AGG 0.558095 8_4:+7214675 Msa1310620:CDS
CGATAGTCCTTGGAGAGTAC+CGG 0.562349 8_4:-7213565 None:intergenic
ATGTTCGAACCACCGTATGT+TGG 0.565122 8_4:+7215167 Msa1310620:CDS
AAACAGGAAAATATTCAGAT+GGG 0.565601 8_4:+7212526 Msa1310620:intron
GATGGTTTCTCTTTCAGTGG+AGG 0.567845 8_4:+7212398 Msa1310620:CDS
TAAGTATGCCAGCAAACACC+AGG 0.570359 8_4:+7214332 Msa1310620:CDS
TAAGCTTATTGAAGTTCCAA+AGG 0.573364 8_4:+7215252 Msa1310620:CDS
CCATGGATTAATATCACTGA+AGG 0.576210 8_4:-7213426 None:intergenic
GGAGTGGAAGATTTCTGCAA+AGG 0.578345 8_4:+7215220 Msa1310620:CDS
AGTTCTTCCGGTACTCTCCA+AGG 0.579849 8_4:+7213558 Msa1310620:CDS
AATGAAAGAAGAAGATGCAA+TGG 0.582732 8_4:+7214851 Msa1310620:CDS
GACAAAGCACTGACAAGCTG+TGG 0.588914 8_4:+7214819 Msa1310620:CDS
CTGGTTGAGCTACGATGGAG+TGG 0.595244 8_4:+7215204 Msa1310620:CDS
AGTGATGAATGGTTTAAGCA+AGG 0.595928 8_4:+7212558 Msa1310620:CDS
AAATGAAACTCACCTGTGAA+GGG 0.596087 8_4:-7213452 None:intergenic
TTGTGGAAGAAGATTGAAGG+TGG 0.598706 8_4:-7212209 None:intergenic
TTAGGCTGGACATCATGCAC+AGG 0.598886 8_4:+7216684 Msa1310620:intron
ATCTGAAATTTAACCTGTGT+AGG 0.599125 8_4:+7216820 Msa1310620:three_prime_UTR
GGTACTAGCTCTCAAGCTAC+CGG 0.606037 8_4:+7213115 Msa1310620:CDS
GATCGCTGGTTGAGCTACGA+TGG 0.607809 8_4:+7215199 Msa1310620:CDS
GAGGAGCCAGATATGAGATA+GGG 0.609039 8_4:-7214885 None:intergenic
TTGCTGAATATAGACAATGT+AGG 0.611532 8_4:-7214663 None:intergenic
GTTCGAACCACCGTATGTTG+GGG 0.616165 8_4:+7215169 Msa1310620:CDS
CTGAATATAGACAATGTAGG+TGG 0.618276 8_4:-7214660 None:intergenic
ACACAAGCAATTACCATCAA+GGG 0.620118 8_4:-7213999 None:intergenic
GCCGTAACATTTGATTGGCT+AGG 0.627082 8_4:+7213589 Msa1310620:CDS
TCACCTGTGAAGGGAAACCA+TGG 0.629688 8_4:-7213443 None:intergenic
GTGGAAGAAGATTGAAGGTG+GGG 0.630096 8_4:-7212207 None:intergenic
GTTGGGGCCAGAGAGATCGC+TGG 0.642573 8_4:+7215185 Msa1310620:CDS
CATCATGCACAGGAAGATTG+CGG 0.645709 8_4:+7216694 Msa1310620:CDS
TTTCCTTCAGAGGTATGTGG+AGG 0.652255 8_4:+7215111 Msa1310620:intron
TAATTACCTGAAACGATCGC+CGG 0.653802 8_4:-7213134 None:intergenic
TGCATTCAATGCAAAGCCTG+AGG 0.657773 8_4:-7214904 None:intergenic
TGGTTGGTTGGAGAGTGAAG+AGG 0.671538 8_4:-7212114 None:intergenic
TGGTCATTGCATGAAAGAAG+TGG 0.676371 8_4:-7212146 None:intergenic
TCTCTGGCCCCAACATACGG+TGG 0.693967 8_4:-7215176 None:intergenic

CRISPR-GE

badsite warning sgRNA_sequence Strand Position Region GC_content
!! TAATATAAAAATTGAGTTAA+AGG + chr8_4:7215768-7215787 Msa1310620:intron 10.0%
!! ATGAAGTTCAAATAATAAAA+GGG - chr8_4:7212953-7212972 None:intergenic 15.0%
!! AATGAAGTTCAAATAATAAA+AGG - chr8_4:7212954-7212973 None:intergenic 15.0%
!! AATTAAGAAAAATATGACAT+AGG + chr8_4:7213214-7213233 Msa1310620:intron 15.0%
!!! ATATGATTTTATTCAATAGA+TGG + chr8_4:7213373-7213392 Msa1310620:intron 15.0%
!! ATTGATATAAACCAAATTAA+TGG + chr8_4:7213711-7213730 Msa1310620:intron 15.0%
!!! AGTTTGTTAATGTTATTTTT+CGG + chr8_4:7213813-7213832 Msa1310620:intron 15.0%
!! TAGTTAATCACATATTTAAA+CGG - chr8_4:7214471-7214490 None:intergenic 15.0%
!!! AGTGAATTTCTATATATTTT+GGG - chr8_4:7214978-7214997 None:intergenic 15.0%
!! TTCATACTAAAAAAACATTT+CGG - chr8_4:7216555-7216574 None:intergenic 15.0%
!!! CTCTTTTTCATTTTCTTTTT+TGG + chr8_4:7212443-7212462 Msa1310620:intron 20.0%
!!! TAACAAATTTTTGTCACATA+GGG - chr8_4:7212871-7212890 None:intergenic 20.0%
!! AATCATATCAACAACAAAAT+TGG - chr8_4:7213027-7213046 None:intergenic 20.0%
!!! ATTTTGTTGTTGATATGATT+AGG + chr8_4:7213027-7213046 Msa1310620:intron 20.0%
!!! TATAGTTTCTTCTATTTTGT+TGG + chr8_4:7213626-7213645 Msa1310620:intron 20.0%
!!! ATTTTTCAGAACAAATATTG+AGG + chr8_4:7213781-7213800 Msa1310620:intron 20.0%
!!! TTTTTCAGAACAAATATTGA+GGG + chr8_4:7213782-7213801 Msa1310620:intron 20.0%
!! TAACATTAACAAACTAAAGT+TGG - chr8_4:7213808-7213827 None:intergenic 20.0%
!! AATTTGTGATTAATGAGTTA+TGG - chr8_4:7214528-7214547 None:intergenic 20.0%
!! AAAGATAAATATTCACCTTT+AGG - chr8_4:7214953-7214972 None:intergenic 20.0%
!!! CAGTGAATTTCTATATATTT+TGG - chr8_4:7214979-7214998 None:intergenic 20.0%
!!! GTTAATTGCATACTTTATTT+TGG - chr8_4:7215031-7215050 None:intergenic 20.0%
!!! TTTTATTTAAGCAAAGTAAC+AGG - chr8_4:7215435-7215454 None:intergenic 20.0%
!! ACATATACTAATAGAAACTA+TGG + chr8_4:7215507-7215526 Msa1310620:intron 20.0%
!!! TCAGATTTTTAAAAATAGAG+AGG + chr8_4:7215794-7215813 Msa1310620:intron 20.0%
!!! CAGATTTTTAAAAATAGAGA+GGG + chr8_4:7215795-7215814 Msa1310620:intron 20.0%
!!! TGAATGTAGTTTTTAATGAA+AGG + chr8_4:7216314-7216333 Msa1310620:intron 20.0%
!! ATTGTGTTTGAATATATACT+TGG - chr8_4:7216846-7216865 None:intergenic 20.0%
!! ACAACATAAACAAATATGTT+TGG - chr8_4:7216874-7216893 None:intergenic 20.0%
!! ATATGTTTCTTTTCCTAAGT+TGG + chr8_4:7212035-7212054 Msa1310620:five_prime_UTR 25.0%
! GCACAAAAAATACTAACTAA+CGG + chr8_4:7212057-7212076 Msa1310620:five_prime_UTR 25.0%
!!! CTGTAATTCTGAGATATTAT+TGG + chr8_4:7212495-7212514 Msa1310620:intron 25.0%
! ATTATTGGAATCTTCTAAAC+AGG + chr8_4:7212510-7212529 Msa1310620:intron 25.0%
! TAAACAGGAAAATATTCAGA+TGG + chr8_4:7212525-7212544 Msa1310620:intron 25.0%
! AAACAGGAAAATATTCAGAT+GGG + chr8_4:7212526-7212545 Msa1310620:intron 25.0%
! TTTCGACAACAAATAAGAAA+TGG - chr8_4:7212618-7212637 None:intergenic 25.0%
!!! TGGACAAACTTTATTTTTTC+CGG - chr8_4:7212697-7212716 None:intergenic 25.0%
!! CTAACAAATTTTTGTCACAT+AGG - chr8_4:7212872-7212891 None:intergenic 25.0%
! TAAATTGATTGTGAAGTGTA+AGG + chr8_4:7212898-7212917 Msa1310620:intron 25.0%
!! ATTTGAACTTCATTAAGTTG+AGG + chr8_4:7212960-7212979 Msa1310620:intron 25.0%
!! AAAGCAAAAGATCCAATTTT+TGG + chr8_4:7213082-7213101 Msa1310620:CDS 25.0%
!! AAGCAAAAGATCCAATTTTT+GGG + chr8_4:7213083-7213102 Msa1310620:CDS 25.0%
! ATATGACATAGGAAAAATTG+CGG + chr8_4:7213225-7213244 Msa1310620:intron 25.0%
! TATGATTCAATTAGTAACGT+AGG - chr8_4:7213345-7213364 None:intergenic 25.0%
!!! TCTAAAAGCATCCATTAATT+TGG - chr8_4:7213725-7213744 None:intergenic 25.0%
! CCTGAAATAGAAAAAGAAAA+TGG - chr8_4:7213932-7213951 None:intergenic 25.0%
!! CCATTTTCTTTTTCTATTTC+AGG + chr8_4:7213929-7213948 Msa1310620:intron 25.0%
!! TCTTTTTCTATTTCAGGATT+TGG + chr8_4:7213935-7213954 Msa1310620:intron 25.0%
!! CTTTTTCTATTTCAGGATTT+GGG + chr8_4:7213936-7213955 Msa1310620:intron 25.0%
! CAACTCAAAAATAAACTTAC+AGG - chr8_4:7214390-7214409 None:intergenic 25.0%
! TCACATTAAATGGAATCTTT+AGG - chr8_4:7214758-7214777 None:intergenic 25.0%
! AGAGAATCAATCACATTAAA+TGG - chr8_4:7214768-7214787 None:intergenic 25.0%
!! TCTTCTTCTTTCATTTTGTA+TGG - chr8_4:7214846-7214865 None:intergenic 25.0%
! TATCTGTGATTTGAGAAATT+TGG + chr8_4:7215071-7215090 Msa1310620:intron 25.0%
! TTAATTCATATTTCCTTCAG+AGG + chr8_4:7215101-7215120 Msa1310620:intron 25.0%
! CTTAAGACAAATATGTGAAA+AGG - chr8_4:7215292-7215311 None:intergenic 25.0%
! ACTAATAGAAACTATGGTTA+AGG + chr8_4:7215513-7215532 Msa1310620:intron 25.0%
! CTAATAGAAACTATGGTTAA+GGG + chr8_4:7215514-7215533 Msa1310620:intron 25.0%
! AGTGTTAGAATTAGACATAT+AGG + chr8_4:7216454-7216473 Msa1310620:intron 25.0%
!! ATAAACTTCTTGCTCTTTTT+AGG + chr8_4:7216666-7216685 Msa1310620:intron 25.0%
! CAGATATTCAAATCCAAATT+TGG + chr8_4:7216937-7216956 Msa1310620:three_prime_UTR 25.0%
! ATTCAAATCCAAATTTGGAT+AGG + chr8_4:7216942-7216961 Msa1310620:three_prime_UTR 25.0%
! TTCAAATCCAAATTTGGATA+GGG + chr8_4:7216943-7216962 Msa1310620:three_prime_UTR 25.0%
!!! AGTATTTTTTGTGCCAACTT+AGG - chr8_4:7212051-7212070 None:intergenic 30.0%
AGTTTGTGTCTTTGTGTTAA+TGG + chr8_4:7212290-7212309 Msa1310620:intron 30.0%
ATTGGAAACAAAGTATGAAG+AGG - chr8_4:7212335-7212354 None:intergenic 30.0%
TCTCTTGAACTATTGTTAGA+AGG + chr8_4:7212749-7212768 Msa1310620:intron 30.0%
CTCTTGAACTATTGTTAGAA+GGG + chr8_4:7212750-7212769 Msa1310620:intron 30.0%
TCTTGAACTATTGTTAGAAG+GGG + chr8_4:7212751-7212770 Msa1310620:intron 30.0%
CAGAATTGTTTAGATAACTG+TGG - chr8_4:7212836-7212855 None:intergenic 30.0%
GTTAAAGCTTATTCAATTCC+TGG + chr8_4:7213049-7213068 Msa1310620:CDS 30.0%
CTCATTTAAGAATATGCCTA+GGG - chr8_4:7213484-7213503 None:intergenic 30.0%
!! ATGGATGCTTTTAGAAACAT+AGG + chr8_4:7213730-7213749 Msa1310620:intron 30.0%
AACTGAAAGCTTGATTATCA+AGG - chr8_4:7213851-7213870 None:intergenic 30.0%
ATAAGCCTCAACCTAAATAT+GGG + chr8_4:7213966-7213985 Msa1310620:CDS 30.0%
! CAATTTTTGTCGCTATGAAA+CGG - chr8_4:7214028-7214047 None:intergenic 30.0%
!! ATTAGTCTTGTTTGTTTGCA+GGG + chr8_4:7214288-7214307 Msa1310620:intron 30.0%
! TTAAGTTGTTAATCTTCTCC+TGG - chr8_4:7214353-7214372 None:intergenic 30.0%
CTCAAAAATAAACTTACAGG+TGG - chr8_4:7214387-7214406 None:intergenic 30.0%
AATTTCGACAACAATTTCGA+TGG + chr8_4:7214439-7214458 Msa1310620:intron 30.0%
TTGCTGAATATAGACAATGT+AGG - chr8_4:7214666-7214685 None:intergenic 30.0%
AATGAAAGAAGAAGATGCAA+TGG + chr8_4:7214851-7214870 Msa1310620:CDS 30.0%
GGATATGCAAACAATACTAA+AGG + chr8_4:7215132-7215151 Msa1310620:CDS 30.0%
CAATACTAAAGGACAAAAGT+TGG + chr8_4:7215143-7215162 Msa1310620:CDS 30.0%
AACTTCAATAAGCTTATGGT+TGG - chr8_4:7215248-7215267 None:intergenic 30.0%
TTGGAACTTCAATAAGCTTA+TGG - chr8_4:7215252-7215271 None:intergenic 30.0%
TAAGCTTATTGAAGTTCCAA+AGG + chr8_4:7215252-7215271 Msa1310620:CDS 30.0%
TTCACATATTTGTCTTAAGC+TGG + chr8_4:7215293-7215312 Msa1310620:intron 30.0%
AGGAAAAGAATGATACTCTT+TGG - chr8_4:7215353-7215372 None:intergenic 30.0%
GTTTATGATTGCATACTCAT+TGG - chr8_4:7215459-7215478 None:intergenic 30.0%
AACTCTTCACAATGAAAATG+TGG + chr8_4:7215547-7215566 Msa1310620:intron 30.0%
TGACATTCATTCGTAGTATA+TGG + chr8_4:7215598-7215617 Msa1310620:intron 30.0%
!!! TGACTGTTTTGATGATAGTT+TGG + chr8_4:7215649-7215668 Msa1310620:intron 30.0%
!!! TGTTTTGATGATAGTTTGGT+AGG + chr8_4:7215653-7215672 Msa1310620:intron 30.0%
AAAAGTTGAATTTCCACACA+AGG - chr8_4:7216031-7216050 None:intergenic 30.0%
! TCAACTTTTTGTCAGAAGAA+TGG + chr8_4:7216042-7216061 Msa1310620:intron 30.0%
AGGCAAGAAATATAAATCTC+TGG + chr8_4:7216066-7216085 Msa1310620:intron 30.0%
AGATCTAGTATCTAGTATTG+TGG + chr8_4:7216160-7216179 Msa1310620:intron 30.0%
TGTGATTAAAGCAGTTTCAT+AGG + chr8_4:7216222-7216241 Msa1310620:intron 30.0%
GTGATTAAAGCAGTTTCATA+GGG + chr8_4:7216223-7216242 Msa1310620:intron 30.0%
TTTCATAGGGAGCTTAAATT+GGG + chr8_4:7216236-7216255 Msa1310620:intron 30.0%
TTTAATGAAAGGACCAAATG+CGG + chr8_4:7216325-7216344 Msa1310620:intron 30.0%
GTTCGAATTCTTAAGGAATT+AGG - chr8_4:7216393-7216412 None:intergenic 30.0%
TTAGACAACAAGGAATTCAA+TGG - chr8_4:7216487-7216506 None:intergenic 30.0%
ACATCTTTCTATTCTCCTAA+GGG + chr8_4:7216634-7216653 Msa1310620:intron 30.0%
GTTTATTGTAACATTCCCTT+AGG - chr8_4:7216652-7216671 None:intergenic 30.0%
GAACTTGGACAACTTATTTA+TGG + chr8_4:7216721-7216740 Msa1310620:CDS 30.0%
! ATCTGAAATTTAACCTGTGT+AGG + chr8_4:7216820-7216839 Msa1310620:three_prime_UTR 30.0%
!! GAAAGAAGTGGTAGTTTGTT+TGG - chr8_4:7212137-7212156 None:intergenic 35.0%
! ATGACCATTCAAGCTTTTCA+TGG + chr8_4:7212162-7212181 Msa1310620:CDS 35.0%
AGAACCATGAAAAGCTTGAA+TGG - chr8_4:7212169-7212188 None:intergenic 35.0%
CTGAACTGTAGTACTTCAAA+TGG + chr8_4:7212261-7212280 Msa1310620:CDS 35.0%
AAACCATCACCAACAGAAAT+AGG - chr8_4:7212386-7212405 None:intergenic 35.0%
AAAAGAGTAGCTATGCTACT+AGG - chr8_4:7212430-7212449 None:intergenic 35.0%
AACCATTCATCACTTGGATT+AGG - chr8_4:7212552-7212571 None:intergenic 35.0%
TGCTTAAACCATTCATCACT+TGG - chr8_4:7212558-7212577 None:intergenic 35.0%
AGTGATGAATGGTTTAAGCA+AGG + chr8_4:7212558-7212577 Msa1310620:CDS 35.0%
GTGATGAATGGTTTAAGCAA+GGG + chr8_4:7212559-7212578 Msa1310620:CDS 35.0%
ATGGTTTAAGCAAGGGAAAA+TGG + chr8_4:7212566-7212585 Msa1310620:CDS 35.0%
!!! TTTTTTTTGTCTTACCCCTC+CGG + chr8_4:7212641-7212660 Msa1310620:intron 35.0%
ATTTCCAAATCCTTGGAAAC+CGG - chr8_4:7212663-7212682 None:intergenic 35.0%
ACTCAAGATTTCCAAATCCT+TGG - chr8_4:7212670-7212689 None:intergenic 35.0%
GGATTTGGAAATCTTGAGTT+TGG + chr8_4:7212671-7212690 Msa1310620:intron 35.0%
!! TCCAATTTTTGGGCTAACAA+TGG + chr8_4:7213093-7213112 Msa1310620:CDS 35.0%
!! CCAATTTTTGGGCTAACAAT+GGG + chr8_4:7213094-7213113 Msa1310620:CDS 35.0%
! CCATGGATTAATATCACTGA+AGG - chr8_4:7213429-7213448 None:intergenic 35.0%
CCTTCAGTGATATTAATCCA+TGG + chr8_4:7213426-7213445 Msa1310620:CDS 35.0%
AAATGAAACTCACCTGTGAA+GGG - chr8_4:7213455-7213474 None:intergenic 35.0%
! AGTTTCATTTGTTTCTCCCT+AGG + chr8_4:7213465-7213484 Msa1310620:intron 35.0%
GCTCATTTAAGAATATGCCT+AGG - chr8_4:7213485-7213504 None:intergenic 35.0%
TTTGCGATAAGAATATGCCT+AGG - chr8_4:7213539-7213558 None:intergenic 35.0%
TTCTTATCGCAAAGTTCTTC+CGG + chr8_4:7213546-7213565 Msa1310620:CDS 35.0%
ACCTAGCCAATCAAATGTTA+CGG - chr8_4:7213593-7213612 None:intergenic 35.0%
ACTCAAAGTTAGTAGAGATG+TGG + chr8_4:7213872-7213891 Msa1310620:intron 35.0%
GATAAGCCTCAACCTAAATA+TGG + chr8_4:7213965-7213984 Msa1310620:CDS 35.0%
!! TCAAACCCATATTTAGGTTG+AGG - chr8_4:7213974-7213993 None:intergenic 35.0%
GTGTAGTCAAACCCATATTT+AGG - chr8_4:7213980-7213999 None:intergenic 35.0%
ACACAAGCAATTACCATCAA+GGG - chr8_4:7214002-7214021 None:intergenic 35.0%
ATGATGACACATATTCTGCA+TGG - chr8_4:7214148-7214167 None:intergenic 35.0%
CCATGATTCTTATTAGCCAA+GGG - chr8_4:7214232-7214251 None:intergenic 35.0%
TCCATGATTCTTATTAGCCA+AGG - chr8_4:7214233-7214252 None:intergenic 35.0%
!! CATTAGTCTTGTTTGTTTGC+AGG + chr8_4:7214287-7214306 Msa1310620:intron 35.0%
CTGAATATAGACAATGTAGG+TGG - chr8_4:7214663-7214682 None:intergenic 35.0%
ATATTCAGCAACTTTCTGCT+AGG + chr8_4:7214675-7214694 Msa1310620:CDS 35.0%
! GCTAGGTGAAATATTTTCAC+AGG + chr8_4:7214692-7214711 Msa1310620:CDS 35.0%
TGATTCTCTTGTGAGTGTTT+AGG + chr8_4:7214779-7214798 Msa1310620:intron 35.0%
! TGAGTGTTTAGGATCCATTA+AGG + chr8_4:7214790-7214809 Msa1310620:intron 35.0%
! GAGTGTTTAGGATCCATTAA+GGG + chr8_4:7214791-7214810 Msa1310620:intron 35.0%
AACCATGAAGAAAGACCTAA+AGG + chr8_4:7214935-7214954 Msa1310620:CDS 35.0%
! ATATTTCCTTCAGAGGTATG+TGG + chr8_4:7215108-7215127 Msa1310620:intron 35.0%
GGAATCTAAGCATTTACCTT+TGG - chr8_4:7215271-7215290 None:intergenic 35.0%
AAGCAAAGTAACAGGTAACA+AGG - chr8_4:7215427-7215446 None:intergenic 35.0%
!! TGCAAGGGGCATTTATAAAT+CGG - chr8_4:7215577-7215596 None:intergenic 35.0%
CTAGAAGTAGCTTAATCTCA+TGG + chr8_4:7215709-7215728 Msa1310620:intron 35.0%
! ATATTATGCACTCACTGACT+CGG - chr8_4:7215754-7215773 None:intergenic 35.0%
CAGTCTAAGTTCTTAGGAAT+AGG - chr8_4:7215904-7215923 None:intergenic 35.0%
TCCTAAGAACTTAGACTGTT+AGG + chr8_4:7215906-7215925 Msa1310620:intron 35.0%
ACCTAACAGTCTAAGTTCTT+AGG - chr8_4:7215910-7215929 None:intergenic 35.0%
GTTTCATAGGGAGCTTAAAT+TGG + chr8_4:7216235-7216254 Msa1310620:intron 35.0%
CTAGGAAATACAGGAATATG+TGG + chr8_4:7216265-7216284 Msa1310620:intron 35.0%
! CAAGCTTGTTCGAATTCTTA+AGG - chr8_4:7216400-7216419 None:intergenic 35.0%
CTTAAGAATTCGAACAAGCT+TGG + chr8_4:7216398-7216417 Msa1310620:intron 35.0%
!! TTGCACAAAAGTACTATGCT+TGG + chr8_4:7216576-7216595 Msa1310620:intron 35.0%
AGTACTATGCTTGGAAACTA+TGG + chr8_4:7216585-7216604 Msa1310620:intron 35.0%
CACATCTTTCTATTCTCCTA+AGG + chr8_4:7216633-7216652 Msa1310620:intron 35.0%
AATATATACTTGGCCTACAC+AGG - chr8_4:7216836-7216855 None:intergenic 35.0%
GACATTTCCCTATCCAAATT+TGG - chr8_4:7216953-7216972 None:intergenic 35.0%
!! TGGTAGTTTGTTTGGTTGGT+TGG - chr8_4:7212129-7212148 None:intergenic 40.0%
!! GAAGTGGTAGTTTGTTTGGT+TGG - chr8_4:7212133-7212152 None:intergenic 40.0%
TGGTCATTGCATGAAAGAAG+TGG - chr8_4:7212149-7212168 None:intergenic 40.0%
TGTGGAAGAAGATTGAAGGT+GGG - chr8_4:7212211-7212230 None:intergenic 40.0%
TTGTGGAAGAAGATTGAAGG+TGG - chr8_4:7212212-7212231 None:intergenic 40.0%
GCTTTGTGGAAGAAGATTGA+AGG - chr8_4:7212215-7212234 None:intergenic 40.0%
! TACTTTGTTTCCAATGCTGC+AGG + chr8_4:7212340-7212359 Msa1310620:intron 40.0%
AGATAATCATCCTGCAGCAT+TGG - chr8_4:7212353-7212372 None:intergenic 40.0%
TTGGAAATCTTGAGTTTGGC+CGG + chr8_4:7212675-7212694 Msa1310620:intron 40.0%
ATCCTGGCTAAAACAATCGT+TGG - chr8_4:7212717-7212736 None:intergenic 40.0%
GCTTATTCAATTCCTGGAAC+TGG + chr8_4:7213055-7213074 Msa1310620:CDS 40.0%
!!! TTTGCTTTTTCACCAGTTCC+AGG - chr8_4:7213070-7213089 None:intergenic 40.0%
CCCATTGTTAGCCCAAAAAT+TGG - chr8_4:7213097-7213116 None:intergenic 40.0%
TAATTACCTGAAACGATCGC+CGG - chr8_4:7213137-7213156 None:intergenic 40.0%
!!! AGATGGTTTTGTGTCGAAAG+CGG + chr8_4:7213390-7213409 Msa1310620:intron 40.0%
CAAATGAAACTCACCTGTGA+AGG - chr8_4:7213456-7213475 None:intergenic 40.0%
TGATTTCTATGTTGCTGCCT+AGG + chr8_4:7213519-7213538 Msa1310620:intron 40.0%
! TTGTGTCGATGCTTACTCTA+TGG + chr8_4:7213682-7213701 Msa1310620:intron 40.0%
CACACAAGCAATTACCATCA+AGG - chr8_4:7214003-7214022 None:intergenic 40.0%
TTGCACAACAAGTGAGACTT+TGG - chr8_4:7214201-7214220 None:intergenic 40.0%
TTGTGCAAGTAAGTTTCCCT+TGG + chr8_4:7214213-7214232 Msa1310620:intron 40.0%
CCCTTGGCTAATAAGAATCA+TGG + chr8_4:7214229-7214248 Msa1310620:intron 40.0%
CTGGCATACTTAACTACAAC+TGG - chr8_4:7214324-7214343 None:intergenic 40.0%
AGACAATGTAGGTGGAAGTT+TGG - chr8_4:7214655-7214674 None:intergenic 40.0%
AGAAGACCCTATCTCATATC+TGG + chr8_4:7214879-7214898 Msa1310620:CDS 40.0%
TAGGTCTTTCTTCATGGTTC+TGG - chr8_4:7214934-7214953 None:intergenic 40.0%
CACCTTTAGGTCTTTCTTCA+TGG - chr8_4:7214940-7214959 None:intergenic 40.0%
! ATGCTCATATAGTAGCCTTG+CGG - chr8_4:7215385-7215404 None:intergenic 40.0%
ACGAATGAATGTCACTGCAA+GGG - chr8_4:7215592-7215611 None:intergenic 40.0%
TACGAATGAATGTCACTGCA+AGG - chr8_4:7215593-7215612 None:intergenic 40.0%
TAGGTTTGACGCTAAACTTC+AGG + chr8_4:7215672-7215691 Msa1310620:intron 40.0%
GTAGCTTAATCTCATGGATG+AGG + chr8_4:7215715-7215734 Msa1310620:intron 40.0%
!! TATTATGCACTCACTGACTC+GGG - chr8_4:7215753-7215772 None:intergenic 40.0%
!! ACCTCCTGAGCTTTGAAAAA+TGG + chr8_4:7215985-7216004 Msa1310620:intron 40.0%
!!! TTGGCCATTTTTCAAAGCTC+AGG - chr8_4:7215992-7216011 None:intergenic 40.0%
! CTTTTTGTCAGAAGAATGGC+AGG + chr8_4:7216046-7216065 Msa1310620:intron 40.0%
TTCTAATACCGTGTCAGGAA+TGG + chr8_4:7216107-7216126 Msa1310620:intron 40.0%
AAGATGATCCATTCCTGACA+CGG - chr8_4:7216118-7216137 None:intergenic 40.0%
TAGGGAGCTTAAATTGGGAA+AGG + chr8_4:7216241-7216260 Msa1310620:intron 40.0%
GCTTAAATTGGGAAAGGTCT+AGG + chr8_4:7216247-7216266 Msa1310620:intron 40.0%
! TTGATGATCAATGCCGCATT+TGG - chr8_4:7216341-7216360 None:intergenic 40.0%
CCAAGCTATCTTAGACAACA+AGG - chr8_4:7216497-7216516 None:intergenic 40.0%
! CCTTGTTGTCTAAGATAGCT+TGG + chr8_4:7216494-7216513 Msa1310620:intron 40.0%
!! ACTTCTTGCTCTTTTTAGGC+TGG + chr8_4:7216670-7216689 Msa1310620:intron 40.0%
AAGAAGATTGAAGGTGGGGA+TGG - chr8_4:7212206-7212225 None:intergenic 45.0%
GTGGAAGAAGATTGAAGGTG+GGG - chr8_4:7212210-7212229 None:intergenic 45.0%
CCTTGAAAGGAAACGCTTTG+TGG - chr8_4:7212229-7212248 None:intergenic 45.0%
! CCACAAAGCGTTTCCTTTCA+AGG + chr8_4:7212226-7212245 Msa1310620:CDS 45.0%
GCTTCAGAGTCTTCCTTGAA+AGG - chr8_4:7212242-7212261 None:intergenic 45.0%
GCTGCAGGATGATTATCTTC+TGG + chr8_4:7212355-7212374 Msa1310620:intron 45.0%
!! CTGGATGCTCCTATTTCTGT+TGG + chr8_4:7212374-7212393 Msa1310620:CDS 45.0%
!! GCTCCTATTTCTGTTGGTGA+TGG + chr8_4:7212380-7212399 Msa1310620:CDS 45.0%
! GGTGATGGTTTCTCTTTCAG+TGG + chr8_4:7212395-7212414 Msa1310620:CDS 45.0%
GATGGTTTCTCTTTCAGTGG+AGG + chr8_4:7212398-7212417 Msa1310620:CDS 45.0%
GGCCTAATCCAAGTGATGAA+TGG + chr8_4:7212547-7212566 Msa1310620:CDS 45.0%
!!! GTCCAACGATTGTTTTAGCC+AGG + chr8_4:7212712-7212731 Msa1310620:intron 45.0%
GAGAACTCGAGTTCAAATCC+TGG - chr8_4:7212733-7212752 None:intergenic 45.0%
AATCCATGGTTTCCCTTCAC+AGG + chr8_4:7213440-7213459 Msa1310620:CDS 45.0%
ATCGCGCCGTAACATTTGAT+TGG + chr8_4:7213584-7213603 Msa1310620:CDS 45.0%
! GCCGTAACATTTGATTGGCT+AGG + chr8_4:7213589-7213608 Msa1310620:CDS 45.0%
TAAGTATGCCAGCAAACACC+AGG + chr8_4:7214332-7214351 Msa1310620:CDS 45.0%
AATCTTCTCCTGGTGTTTGC+TGG - chr8_4:7214343-7214362 None:intergenic 45.0%
AGGTGGAAGTTTGGCATGTT+GGG - chr8_4:7214646-7214665 None:intergenic 45.0%
TAGGTGGAAGTTTGGCATGT+TGG - chr8_4:7214647-7214666 None:intergenic 45.0%
GAGGAGCCAGATATGAGATA+GGG - chr8_4:7214888-7214907 None:intergenic 45.0%
TGAGGAGCCAGATATGAGAT+AGG - chr8_4:7214889-7214908 None:intergenic 45.0%
! TATCTCATATCTGGCTCCTC+AGG + chr8_4:7214888-7214907 Msa1310620:CDS 45.0%
TGCATTCAATGCAAAGCCTG+AGG - chr8_4:7214907-7214926 None:intergenic 45.0%
! TTTCCTTCAGAGGTATGTGG+AGG + chr8_4:7215111-7215130 Msa1310620:intron 45.0%
TATCCTCCACATACCTCTGA+AGG - chr8_4:7215117-7215136 None:intergenic 45.0%
ATGTTCGAACCACCGTATGT+TGG + chr8_4:7215167-7215186 Msa1310620:CDS 45.0%
TGTTCGAACCACCGTATGTT+GGG + chr8_4:7215168-7215187 Msa1310620:CDS 45.0%
GGAGTGGAAGATTTCTGCAA+AGG + chr8_4:7215220-7215239 Msa1310620:CDS 45.0%
! TCATATAGTAGCCTTGCGGA+AGG - chr8_4:7215381-7215400 None:intergenic 45.0%
CGAATGAATGTCACTGCAAG+GGG - chr8_4:7215591-7215610 None:intergenic 45.0%
CTCATGGATGAGGAATGTCA+AGG + chr8_4:7215725-7215744 Msa1310620:intron 45.0%
GGTGCATTAGAGAAACGGTA+TGG - chr8_4:7215952-7215971 None:intergenic 45.0%
! GAGGAGGTGCATTAGAGAAA+CGG - chr8_4:7215957-7215976 None:intergenic 45.0%
!!! GCCATTTTTCAAAGCTCAGG+AGG - chr8_4:7215989-7216008 None:intergenic 45.0%
AGGTAGATGAGCTAGTGCAT+TGG - chr8_4:7216011-7216030 None:intergenic 45.0%
ACTAGCTCATCTACCTTGTG+TGG + chr8_4:7216015-7216034 Msa1310620:intron 45.0%
TCTGGCGCACTAGATTATAG+AGG + chr8_4:7216084-7216103 Msa1310620:intron 45.0%
! AGAGGTTCTAATACCGTGTC+AGG + chr8_4:7216102-7216121 Msa1310620:intron 45.0%
TGCTGCTATAGCACAGTACA+GGG - chr8_4:7216186-7216205 None:intergenic 45.0%
ATGCTGCTATAGCACAGTAC+AGG - chr8_4:7216187-7216206 None:intergenic 45.0%
GGGAAAGGTCTAGGAAATAC+AGG + chr8_4:7216256-7216275 Msa1310620:intron 45.0%
TGATCATCAACACTGGTGTC+TGG + chr8_4:7216351-7216370 Msa1310620:intron 45.0%
CATCATGCACAGGAAGATTG+CGG + chr8_4:7216694-7216713 Msa1310620:CDS 45.0%
! GGTTGGTTGGAGAGTGAAGA+GGG - chr8_4:7212116-7212135 None:intergenic 50.0%
! TGGTTGGTTGGAGAGTGAAG+AGG - chr8_4:7212117-7212136 None:intergenic 50.0%
CAAATCCTTGGAAACCGGAG+GGG - chr8_4:7212658-7212677 None:intergenic 50.0%
CCAAATCCTTGGAAACCGGA+GGG - chr8_4:7212659-7212678 None:intergenic 50.0%
TCCAAATCCTTGGAAACCGG+AGG - chr8_4:7212660-7212679 None:intergenic 50.0%
! GGTACTAGCTCTCAAGCTAC+CGG + chr8_4:7213115-7213134 Msa1310620:CDS 50.0%
TCACCTGTGAAGGGAAACCA+TGG - chr8_4:7213446-7213465 None:intergenic 50.0%
AGTTCTTCCGGTACTCTCCA+AGG + chr8_4:7213558-7213577 Msa1310620:CDS 50.0%
! CGATAGTCCTTGGAGAGTAC+CGG - chr8_4:7213568-7213587 None:intergenic 50.0%
GGGTTTGACTACACCCTTGA+TGG + chr8_4:7213986-7214005 Msa1310620:CDS 50.0%
GCTTTGTCACTGGCCCTTAA+TGG - chr8_4:7214807-7214826 None:intergenic 50.0%
GCTTGTCAGTGCTTTGTCAC+TGG - chr8_4:7214817-7214836 None:intergenic 50.0%
!! GACAAAGCACTGACAAGCTG+TGG + chr8_4:7214819-7214838 Msa1310620:CDS 50.0%
GTTCGAACCACCGTATGTTG+GGG + chr8_4:7215169-7215188 Msa1310620:CDS 50.0%
ATCTCTCTGGCCCCAACATA+CGG - chr8_4:7215182-7215201 None:intergenic 50.0%
!! GCGGCATTGATCATCAACAC+TGG + chr8_4:7216344-7216363 Msa1310620:intron 50.0%
TTAGGCTGGACATCATGCAC+AGG + chr8_4:7216684-7216703 Msa1310620:intron 50.0%
GAAGATTGCGGCGAAGAACT+TGG + chr8_4:7216706-7216725 Msa1310620:CDS 50.0%
TCTTACCCCTCCGGTTTCCA+AGG + chr8_4:7212650-7212669 Msa1310620:intron 55.0%
CCCTCCGGTTTCCAAGGATT+TGG + chr8_4:7212656-7212675 Msa1310620:intron 55.0%
AAGCTACCGGCGATCGTTTC+AGG + chr8_4:7213128-7213147 Msa1310620:CDS 55.0%
TGTTACGGCGCGATAGTCCT+TGG - chr8_4:7213578-7213597 None:intergenic 55.0%
AGCTCAACCAGCGATCTCTC+TGG - chr8_4:7215195-7215214 None:intergenic 55.0%
! GATCGCTGGTTGAGCTACGA+TGG + chr8_4:7215199-7215218 Msa1310620:CDS 55.0%
CTGGTTGAGCTACGATGGAG+TGG + chr8_4:7215204-7215223 Msa1310620:CDS 55.0%
TTTCCTGCTTGCCTTCCGCA+AGG + chr8_4:7215367-7215386 Msa1310620:intron 55.0%
TCTCTGGCCCCAACATACGG+TGG - chr8_4:7215179-7215198 None:intergenic 60.0%
! TAGCCTTGCGGAAGGCAAGC+AGG - chr8_4:7215373-7215392 None:intergenic 60.0%
CAGGAGGTTCTCGTGTGAGG+AGG - chr8_4:7215973-7215992 None:intergenic 60.0%
GCTCAGGAGGTTCTCGTGTG+AGG - chr8_4:7215976-7215995 None:intergenic 60.0%
GTTGGGGCCAGAGAGATCGC+TGG + chr8_4:7215185-7215204 Msa1310620:CDS 65.0%
Chromosome Type Strat End Strand Name
chr8_4 gene 7212025 7217028 7212025 ID=Msa1310620;Name=Msa1310620
chr8_4 mRNA 7212025 7217028 7212025 ID=Msa1310620-mRNA-1;Parent=Msa1310620;Name=Msa1310620-mRNA-1;_AED=0.09;_eAED=0.09;_QI=137|1|1|1|1|1|13|263|384
chr8_4 exon 7212025 7212290 7212025 ID=Msa1310620-mRNA-1:exon:2525;Parent=Msa1310620-mRNA-1
chr8_4 exon 7212362 7212419 7212362 ID=Msa1310620-mRNA-1:exon:2526;Parent=Msa1310620-mRNA-1
chr8_4 exon 7212532 7212587 7212532 ID=Msa1310620-mRNA-1:exon:2527;Parent=Msa1310620-mRNA-1
chr8_4 exon 7213049 7213149 7213049 ID=Msa1310620-mRNA-1:exon:2528;Parent=Msa1310620-mRNA-1
chr8_4 exon 7213392 7213461 7213392 ID=Msa1310620-mRNA-1:exon:2529;Parent=Msa1310620-mRNA-1
chr8_4 exon 7213541 7213610 7213541 ID=Msa1310620-mRNA-1:exon:2530;Parent=Msa1310620-mRNA-1
chr8_4 exon 7213951 7214007 7213951 ID=Msa1310620-mRNA-1:exon:2531;Parent=Msa1310620-mRNA-1
chr8_4 exon 7214153 7214220 7214153 ID=Msa1310620-mRNA-1:exon:2532;Parent=Msa1310620-mRNA-1
chr8_4 exon 7214309 7214389 7214309 ID=Msa1310620-mRNA-1:exon:2533;Parent=Msa1310620-mRNA-1
chr8_4 exon 7214636 7214713 7214636 ID=Msa1310620-mRNA-1:exon:2534;Parent=Msa1310620-mRNA-1
chr8_4 exon 7214801 7214956 7214801 ID=Msa1310620-mRNA-1:exon:2535;Parent=Msa1310620-mRNA-1
chr8_4 exon 7215121 7215273 7215121 ID=Msa1310620-mRNA-1:exon:2536;Parent=Msa1310620-mRNA-1
chr8_4 exon 7216688 7217028 7216688 ID=Msa1310620-mRNA-1:exon:2537;Parent=Msa1310620-mRNA-1
chr8_4 five_prime_UTR 7212025 7212161 7212025 ID=Msa1310620-mRNA-1:five_prime_utr;Parent=Msa1310620-mRNA-1
chr8_4 CDS 7212162 7212290 7212162 ID=Msa1310620-mRNA-1:cds;Parent=Msa1310620-mRNA-1
chr8_4 CDS 7212362 7212419 7212362 ID=Msa1310620-mRNA-1:cds;Parent=Msa1310620-mRNA-1
chr8_4 CDS 7212532 7212587 7212532 ID=Msa1310620-mRNA-1:cds;Parent=Msa1310620-mRNA-1
chr8_4 CDS 7213049 7213149 7213049 ID=Msa1310620-mRNA-1:cds;Parent=Msa1310620-mRNA-1
chr8_4 CDS 7213392 7213461 7213392 ID=Msa1310620-mRNA-1:cds;Parent=Msa1310620-mRNA-1
chr8_4 CDS 7213541 7213610 7213541 ID=Msa1310620-mRNA-1:cds;Parent=Msa1310620-mRNA-1
chr8_4 CDS 7213951 7214007 7213951 ID=Msa1310620-mRNA-1:cds;Parent=Msa1310620-mRNA-1
chr8_4 CDS 7214153 7214220 7214153 ID=Msa1310620-mRNA-1:cds;Parent=Msa1310620-mRNA-1
chr8_4 CDS 7214309 7214389 7214309 ID=Msa1310620-mRNA-1:cds;Parent=Msa1310620-mRNA-1
chr8_4 CDS 7214636 7214713 7214636 ID=Msa1310620-mRNA-1:cds;Parent=Msa1310620-mRNA-1
chr8_4 CDS 7214801 7214956 7214801 ID=Msa1310620-mRNA-1:cds;Parent=Msa1310620-mRNA-1
chr8_4 CDS 7215121 7215273 7215121 ID=Msa1310620-mRNA-1:cds;Parent=Msa1310620-mRNA-1
chr8_4 CDS 7216688 7216765 7216688 ID=Msa1310620-mRNA-1:cds;Parent=Msa1310620-mRNA-1
chr8_4 three_prime_UTR 7216766 7217028 7216766 ID=Msa1310620-mRNA-1:three_prime_utr;Parent=Msa1310620-mRNA-1
Gene Sequence

>Msa1310620

ATGACCATTCAAGCTTTTCATGGTTCTTCTTCTTGTTACTTCCATCCCCACCTTCAATCTTCTTCCACAAAGCGTTTCCTTTCAAGGAAGACTCTGAAGCTGAACTGTAGTACTTCAAATGGAGACAAAGATGATTATCTTCTGGATGCTCCTATTTCTGTTGGTGATGGTTTCTCTTTCAGTGGAGGAAAATATTCAGATGGGCCTAATCCAAGTGATGAATGGTTTAAGCAAGGGAAAATGGTTAAAGCTTATTCAATTCCTGGAACTGGTGAAAAAGCAAAAGATCCAATTTTTGGGCTAACAATGGGTACTAGCTCTCAAGCTACCGGCGATCGTTTCAGATGGTTTTGTGTCGAAAGCGGAAGTGTTGATAATCCTTCAGTGATATTAATCCATGGTTTCCCTTCACAGGCATATTCTTATCGCAAAGTTCTTCCGGTACTCTCCAAGGACTATCGCGCCGTAACATTTGATTGGCTAGGATTTGGGTTTTCTGATAAGCCTCAACCTAAATATGGGTTTGACTACACCCTTGATGAATATGTGTCATCATTAGAGTCACTTATTGATGAACTAGCTGTTACCAAAGTCTCACTTGTTGTGCAAGGATATTTTGCACCAGTTGTAGTTAAGTATGCCAGCAAACACCAGGAGAAGATTAACAACTTAATACTCATTAATCCACCTTTAACAGCCCAACATGCCAAACTTCCACCTACATTGTCTATATTCAGCAACTTTCTGCTAGGTGAAATATTTTCACAGGATCCATTAAGGGCCAGTGACAAAGCACTGACAAGCTGTGGACCATACAAAATGAAAGAAGAAGATGCAATGGTCTACAGAAGACCCTATCTCATATCTGGCTCCTCAGGCTTTGCATTGAATGCAATCACCAGAACCATGAAGAAAGACCTAAAGAGGTATGTGGAGGATATGCAAACAATACTAAAGGACAAAAGTTGGAATGTTCGAACCACCGTATGTTGGGGCCAGAGAGATCGCTGGTTGAGCTACGATGGAGTGGAAGATTTCTGCAAAGGTTCCAACCATAAGCTTATTGAAGTTCCAAAGGCTGGACATCATGCACAGGAAGATTGCGGCGAAGAACTTGGACAACTTATTTATGGAATAATAAGAAAAAAGAACTAA

Protein sequence

>Msa1310620

MTIQAFHGSSSCYFHPHLQSSSTKRFLSRKTLKLNCSTSNGDKDDYLLDAPISVGDGFSFSGGKYSDGPNPSDEWFKQGKMVKAYSIPGTGEKAKDPIFGLTMGTSSQATGDRFRWFCVESGSVDNPSVILIHGFPSQAYSYRKVLPVLSKDYRAVTFDWLGFGFSDKPQPKYGFDYTLDEYVSSLESLIDELAVTKVSLVVQGYFAPVVVKYASKHQEKINNLILINPPLTAQHAKLPPTLSIFSNFLLGEIFSQDPLRASDKALTSCGPYKMKEEDAMVYRRPYLISGSSGFALNAITRTMKKDLKRYVEDMQTILKDKSWNVRTTVCWGQRDRWLSYDGVEDFCKGSNHKLIEVPKAGHHAQEDCGEELGQLIYGIIRKKN*