AlfalfaGEDB Alfalfa Gene Editing Database

M. sativa cultivar zhongmu-4 / Msa0249670


Query id Subject id identity % alignment length mismatches gap openings q. start q. end s. start s. end e-value bit score
Msa0249670 MtrunA17_Chr2g0305051 88.339 626 22 3 1 608 1 593 0.0 1109
Msa0249670 MtrunA17_Chr4g0017231 51.600 250 91 1 66 315 78 297 3.10e-80 255
Msa0249670 MtrunA17_Chr4g0057771 38.191 199 108 4 69 256 23 217 9.99e-36 134
Msa0249670 MtrunA17_Chr7g0263541 33.508 191 106 4 82 254 43 230 5.12e-27 110
Msa0249670 MtrunA17_Chr1g0181801 32.984 191 107 4 82 254 118 305 1.86e-24 105
Msa0249670 MtrunA17_Chr8g0337051 27.083 240 111 9 75 309 21 201 1.36e-19 87.8
Msa0249670 MtrunA17_Chr4g0018221 30.882 136 91 2 65 199 44 177 2.28e-17 82.0
Msa0249670 MtrunA17_Chr5g0428971 29.861 144 98 2 57 199 13 154 1.24e-16 79.3
Query id Subject id identity % alignment length mismatches gap openings q. start q. end s. start s. end e-value bit score
Msa0249670 AT5G35170.1 65.591 558 132 3 68 607 72 587 0.0 759
Msa0249670 AT5G35170.2 65.699 551 129 3 68 600 72 580 0.0 751
Msa0249670 AT5G47840.1 56.400 250 79 1 66 315 55 274 4.48e-87 273
Msa0249670 AT5G47840.2 54.400 250 70 1 66 315 55 260 5.70e-82 259
Msa0249670 AT5G63400.1 38.071 197 113 4 68 256 26 221 4.77e-35 133
Msa0249670 AT5G50370.1 37.688 199 109 5 68 255 27 221 2.40e-34 131
Msa0249670 AT5G50370.2 37.696 191 110 4 68 250 27 216 6.03e-34 129
Msa0249670 AT5G63400.2 41.935 155 85 2 68 218 26 179 1.92e-32 124
Msa0249670 AT2G37250.1 34.555 191 104 4 82 254 58 245 2.30e-28 115
Msa0249670 AT2G39270.1 33.862 189 108 3 82 254 71 258 3.08e-26 109
Msa0249670 AT5G26667.3 37.037 135 76 3 69 199 8 137 3.37e-22 95.5
Msa0249670 AT5G26667.2 37.037 135 76 3 69 199 8 137 3.37e-22 95.5
Msa0249670 AT5G26667.4 37.037 135 76 3 69 199 8 137 3.37e-22 95.5
Msa0249670 AT5G26667.1 37.037 135 76 3 69 199 8 137 5.08e-22 95.1
Msa0249670 AT4G25280.1 36.508 126 77 2 75 199 53 176 2.80e-21 94.4
Msa0249670 AT4G25280.2 36.508 126 77 2 75 199 53 176 2.80e-21 94.4
Msa0249670 AT3G60180.1 36.508 126 71 3 78 199 24 144 3.69e-19 86.7
Msa0249670 AT3G60180.2 36.508 126 71 3 78 199 24 144 3.69e-19 86.7

Find 149 sgRNAs with CRISPR-Local

Find 511 sgRNAs with CRISPR-GE


CRISPR-Local

CRISPR-Local
sgRNA_sequence on_target_score Position Region
ATTGCCACTATTAACTTATT+TGG 0.114289 2_2:+37010675 Msa0249670:CDS
ATGTGAATTGATTGTTAATA+AGG 0.168841 2_2:+37007091 Msa0249670:CDS
TCATCCACGGTAGGCCTTTC+AGG 0.177422 2_2:-37014062 None:intergenic
TTTATATTGTAGTGTGTTAT+AGG 0.178691 2_2:-37014755 None:intergenic
CCAAAACCCTGAGGCTTTCT+TGG 0.199207 2_2:-37014248 None:intergenic
GACAATTTGCCAAGTGATTA+TGG 0.208115 2_2:+37014451 Msa0249670:three_prime_UTR
TAACGAACCTTGGGTCTTAA+TGG 0.220622 2_2:-37006895 None:intergenic
ACCGATTCCTGGTATGAAAA+AGG 0.220747 2_2:+37011165 Msa0249670:CDS
TTAGCTTGTTACAGGATAAA+TGG 0.229969 2_2:+37011313 Msa0249670:intron
TGCAAAGATGTTAAGCAAAA+AGG 0.248244 2_2:+37009272 Msa0249670:CDS
ACCATTTCTGGATTCAATTC+AGG 0.255513 2_2:-37011909 None:intergenic
CCAAGAAAGCCTCAGGGTTT+TGG 0.266192 2_2:+37014248 Msa0249670:CDS
GTTGGATATACAGGATTTAA+AGG 0.272534 2_2:+37013093 Msa0249670:intron
TGATAGATCTTGCCAGTTAC+TGG 0.281302 2_2:-37009936 None:intergenic
TCTTTGAAAACTTCTTCTTT+TGG 0.295160 2_2:-37010724 None:intergenic
CTTGGGTCTTAATGGCAAAT+TGG 0.299518 2_2:-37006887 None:intergenic
TTCATGGATTGGGGTGATTA+TGG 0.315840 2_2:+37012286 Msa0249670:CDS
GTAGCAGCTGGGACAGAAAT+AGG 0.318300 2_2:+37009061 Msa0249670:CDS
TTAGCATTGATTAGGATAAC+TGG 0.329268 2_2:-37013142 None:intergenic
GCAAGATGACATGTATTTCT+TGG 0.330998 2_2:+37012887 Msa0249670:CDS
AACTGTATTGATAAATATTA+CGG 0.334827 2_2:+37014591 Msa0249670:three_prime_UTR
CTTTGTTATGTTTGAGTAAG+AGG 0.338487 2_2:-37010593 None:intergenic
CCTTAAGCTTAGCATTGATT+AGG 0.344833 2_2:-37013150 None:intergenic
CCTAATCAATGCTAAGCTTA+AGG 0.348240 2_2:+37013150 Msa0249670:CDS
ATGGGAGAAGGTGCTCTTGC+TGG 0.349850 2_2:+37012223 Msa0249670:CDS
ATTTCCTCATTTCTCGAGAA+TGG 0.354960 2_2:-37011368 None:intergenic
AGAGTGAAAATAGTGAAATC+TGG 0.360626 2_2:+37010781 Msa0249670:CDS
ATACAGGATGTTTATCGAAT+TGG 0.361361 2_2:+37011995 Msa0249670:intron
TTGGCATATTTACAGATTGA+TGG 0.365193 2_2:+37010694 Msa0249670:CDS
GAAATTAATGATTCCTTTGA+AGG 0.373785 2_2:+37014083 Msa0249670:CDS
GTCCTGCAGGTTTGTGTACA+GGG 0.375768 2_2:+37012196 Msa0249670:intron
CCAAGTGATTATGGTAAAAT+CGG 0.379482 2_2:+37014460 Msa0249670:three_prime_UTR
GGATTAGTGCACATATCAAC+TGG 0.382470 2_2:+37009019 Msa0249670:CDS
TGTCCTGCAGGTTTGTGTAC+AGG 0.384124 2_2:+37012195 Msa0249670:intron
GCACTTTCATTTGCCAATGA+TGG 0.388368 2_2:+37012046 Msa0249670:CDS
TTTCCTCATTTCTCGAGAAT+GGG 0.392958 2_2:-37011367 None:intergenic
TGAGGGGATGTAGGAGGAAG+AGG 0.397951 2_2:-37006740 None:intergenic
CGACTTCCAGCAAGCTGTAA+TGG 0.401505 2_2:-37012250 None:intergenic
CCATTGAAGGTGATGATATC+AGG 0.404203 2_2:+37007041 Msa0249670:CDS
AAGAGTTCTTGAGGGGATGT+AGG 0.407056 2_2:-37006749 None:intergenic
GGAATGCCATTACAGCTTGC+TGG 0.407333 2_2:+37012244 Msa0249670:CDS
CTTCTTAATCACTAGACAAT+GGG 0.416346 2_2:+37013641 Msa0249670:intron
ATATCAGGTGCACCTGCATC+TGG 0.416894 2_2:+37007056 Msa0249670:CDS
TCGACAGATGTGTTGGTAGA+AGG 0.421494 2_2:+37009907 Msa0249670:CDS
CGGAGTTTGTAGTGCAACTT+GGG 0.436500 2_2:+37014480 Msa0249670:three_prime_UTR
GCTTTGATTTCTTCTGTCTC+CGG 0.438837 2_2:-37009975 None:intergenic
GGAATGTTATTTAGTCTAGT+AGG 0.438922 2_2:-37011345 None:intergenic
TCGGAGTTTGTAGTGCAACT+TGG 0.441725 2_2:+37014479 Msa0249670:three_prime_UTR
TGAGGAAGAAGAGTTCTTGA+GGG 0.446159 2_2:-37006757 None:intergenic
CTCCACAAGCGAGCCATTGA+AGG 0.448956 2_2:+37007028 Msa0249670:CDS
GGAGTGTGTTAGAACTTAGA+AGG 0.450534 2_2:-37014734 None:intergenic
AACAAGGAGAAATTATCAAC+TGG 0.452608 2_2:-37014666 None:intergenic
GATGTAGGAGGAAGAGGGTG+TGG 0.457226 2_2:-37006734 None:intergenic
GGTTTGTGTACAGGGGTCAA+TGG 0.457274 2_2:+37012204 Msa0249670:intron
TTTCTCTAGACTTTCAGCTT+GGG 0.458159 2_2:-37009327 None:intergenic
AGAAGGTTAGATCCAGTAAC+TGG 0.461130 2_2:+37009924 Msa0249670:CDS
TGAGTTCCCTTGCCAGATGC+AGG 0.462999 2_2:-37007068 None:intergenic
TCCTGAATTGAATCCAGAAA+TGG 0.464437 2_2:+37011908 Msa0249670:CDS
CCTGATATCATCACCTTCAA+TGG 0.464859 2_2:-37007041 None:intergenic
ATGAGCCACATTGCTCTCAA+TGG 0.464885 2_2:-37006686 None:intergenic
TACTAGTATATATATATGTT+AGG 0.468501 2_2:-37014690 None:intergenic
GAAGAAAATAAAAGAGAATG+AGG 0.471223 2_2:-37006775 None:intergenic
CACCTTCAATGGCTCGCTTG+TGG 0.474202 2_2:-37007030 None:intergenic
TTGGTTGCTTGGCTTTAATG+TGG 0.477788 2_2:+37006635 None:intergenic
TGGGGTGATTATGGTGCAAA+AGG 0.479166 2_2:+37012295 Msa0249670:CDS
TGGTTGCTTGGCTTTAATGT+GGG 0.480282 2_2:+37006636 None:intergenic
TAGGATAACTGGTCTGTGTT+CGG 0.482799 2_2:-37013131 None:intergenic
ACTGTATTGATAAATATTAC+GGG 0.483768 2_2:+37014592 Msa0249670:three_prime_UTR
CTAAGAGCAGAAGTAGCAGC+TGG 0.483944 2_2:+37009049 Msa0249670:CDS
AATGAAACCAAGAAAGCCTC+AGG 0.488516 2_2:+37014241 Msa0249670:CDS
TTCTTCAGTGTCATCAGGAC+GGG 0.489322 2_2:-37010009 None:intergenic
ATGAGGAAGAAGAGTTCTTG+AGG 0.491766 2_2:-37006758 None:intergenic
TTATCGAATTGGTACACTGT+TGG 0.491969 2_2:+37012006 Msa0249670:CDS
GTTTGTGTACAGGGGTCAAT+GGG 0.495441 2_2:+37012205 Msa0249670:CDS
TATGCCAAATAAGTTAATAG+TGG 0.502837 2_2:-37010679 None:intergenic
GTTCATGAATGCTGGTCGCT+TGG 0.503110 2_2:+37009099 Msa0249670:CDS
ACACAGAGGGCCATCAATGA+TGG 0.507793 2_2:+37011417 Msa0249670:CDS
GTGGCTCCTCAAAATGCTGT+AGG 0.509632 2_2:+37012909 Msa0249670:CDS
GAGGGGATGTAGGAGGAAGA+GGG 0.512281 2_2:-37006739 None:intergenic
GCAAAAGAGTTCATGAATGC+TGG 0.520094 2_2:+37009091 Msa0249670:CDS
AGTTCTTGAGGGGATGTAGG+AGG 0.522440 2_2:-37006746 None:intergenic
ACAGCTGTCACAATTTCATC+AGG 0.523953 2_2:-37009124 None:intergenic
CAAAAGAGTAGAAGAGTCGC+CGG 0.526347 2_2:+37014007 Msa0249670:CDS
TATATATATGTTAGGTAACA+AGG 0.534425 2_2:-37014682 None:intergenic
GGGGCAAGCATCTTTGATCC+AGG 0.537524 2_2:+37011186 Msa0249670:CDS
CACGGTAGGCCTTTCAGGAA+AGG 0.539847 2_2:-37014057 None:intergenic
TTGTACAGCTCGTAACGGTA+TGG 0.541143 2_2:-37013987 None:intergenic
TTACTCAAACATAACAAAGA+AGG 0.541759 2_2:+37010597 Msa0249670:CDS
AGGTGCACCTGCATCTGGCA+AGG 0.542456 2_2:+37007061 Msa0249670:CDS
AAAGGAACCTTCATCAACAT+TGG 0.543502 2_2:+37012313 Msa0249670:CDS
TGGTCTGTGTTCGGCAGCAG+TGG 0.545359 2_2:-37013122 None:intergenic
ATCTTGAGAATTTCAGAAGA+GGG 0.547915 2_2:+37014546 Msa0249670:three_prime_UTR
TTGTGCAGGGGCTCGTTGAG+TGG 0.548227 2_2:+37014371 Msa0249670:intron
GAGTGTTAAAGTTGTGGTGT+TGG 0.549145 2_2:-37006831 None:intergenic
CAATTTGCCATTAAGACCCA+AGG 0.551534 2_2:+37006888 Msa0249670:CDS
TCTAATACGATATACACATC+AGG 0.552254 2_2:-37009362 None:intergenic
GGAATCATTAATTTCATCCA+CGG 0.552599 2_2:-37014075 None:intergenic
TTTCTTCAGTGTCATCAGGA+CGG 0.557125 2_2:-37010010 None:intergenic
TATGGAACCAATGTTGATGA+AGG 0.558497 2_2:-37012320 None:intergenic
GGTGTGCAACATTGTTGCTA+CGG 0.558759 2_2:-37006713 None:intergenic
TAATAGTGGCAATGTCCCAC+TGG 0.559697 2_2:-37010665 None:intergenic
TCATTAATTTCATCCACGGT+AGG 0.560941 2_2:-37014071 None:intergenic
ATTGGCATGTCTGCTGAAGT+TGG 0.561911 2_2:-37006869 None:intergenic
GAGGAAGAAGAGTTCTTGAG+GGG 0.562077 2_2:-37006756 None:intergenic
TCCTGCAGGTTTGTGTACAG+GGG 0.564656 2_2:+37012197 Msa0249670:intron
TTCATCAACATTGGTTCCAT+AGG 0.570069 2_2:+37012322 Msa0249670:CDS
AAAAGAGTAGAAGAGTCGCC+GGG 0.572875 2_2:+37014008 Msa0249670:CDS
TTCCCCATTCTCGAGAAATG+AGG 0.574307 2_2:+37011364 Msa0249670:CDS
TTCCTCATTTCTCGAGAATG+GGG 0.575872 2_2:-37011366 None:intergenic
ACTGGTTGACATTATTGTCA+TGG 0.577561 2_2:-37010647 None:intergenic
TGCATAATACCACTAGAAGC+AGG 0.583506 2_2:-37013550 None:intergenic
CAGGATTTACCTGCTTCTAG+TGG 0.583806 2_2:+37013541 Msa0249670:intron
GTTTGTAGTGCAACTTGGGG+TGG 0.588002 2_2:+37014484 Msa0249670:three_prime_UTR
TGGCTCCTCAAAATGCTGTA+GGG 0.588324 2_2:+37012910 Msa0249670:CDS
TTGATTTCTTCTGTCTCCGG+CGG 0.588642 2_2:-37009972 None:intergenic
GATCTTGAGAATTTCAGAAG+AGG 0.596054 2_2:+37014545 Msa0249670:three_prime_UTR
AGATGACATGTATTTCTTGG+TGG 0.597196 2_2:+37012890 Msa0249670:CDS
GTGTGCAACATTGTTGCTAC+GGG 0.598580 2_2:-37006712 None:intergenic
GATATTGAGTGTTAAAGTTG+TGG 0.600244 2_2:-37006837 None:intergenic
CAATGATGGAAAACGTGTAA+AGG 0.601926 2_2:+37012060 Msa0249670:CDS
TCTAATCTCAGGTGCAGCGG+AGG 0.603873 2_2:+37012857 Msa0249670:intron
GGTGCACCTGCATCTGGCAA+GGG 0.604640 2_2:+37007062 Msa0249670:CDS
TTGAGAATTTCAGAAGAGGG+TGG 0.606985 2_2:+37014549 Msa0249670:three_prime_UTR
GGTAGGCCTTTCAGGAAAGG+TGG 0.629624 2_2:-37014054 None:intergenic
CTTTCCTGAAAGGCCTACCG+TGG 0.636569 2_2:+37014058 Msa0249670:CDS
GTACAGGGGTCAATGGGAGA+AGG 0.638754 2_2:+37012211 Msa0249670:CDS
CAGCTCGTAACGGTATGGAT+AGG 0.640285 2_2:-37013982 None:intergenic
GATTAGTGCACATATCAACT+GGG 0.641321 2_2:+37009020 Msa0249670:CDS
TAAGAGCAGAAGTAGCAGCT+GGG 0.644749 2_2:+37009050 Msa0249670:CDS
GTGAAAATAGTGAAATCTGG+AGG 0.645858 2_2:+37010784 Msa0249670:CDS
ATTCTGATCGACAGATGTGT+TGG 0.657174 2_2:+37009900 Msa0249670:CDS
TGACAATAATGTCAACCAGT+GGG 0.660936 2_2:+37010650 Msa0249670:CDS
AGACAGAAGAAATCAAAGCA+AGG 0.664626 2_2:+37009979 Msa0249670:CDS
TTGTTACAGGATAAATGGAG+AGG 0.665409 2_2:+37011318 Msa0249670:intron
AATATAACTAGTATCATGTG+AGG 0.665527 2_2:-37014615 None:intergenic
CAGCTTGGGATAAACTACGA+GGG 0.665535 2_2:-37009313 None:intergenic
ATTTCTAATCTCAGGTGCAG+CGG 0.669501 2_2:+37012854 Msa0249670:intron
ATGACAATAATGTCAACCAG+TGG 0.678117 2_2:+37010649 Msa0249670:CDS
TGGTGTTGGAGAAGTAGACA+TGG 0.690792 2_2:-37006817 None:intergenic
ATGAAACCAAGAAAGCCTCA+GGG 0.692901 2_2:+37014242 Msa0249670:CDS
GGAGTTTGTAGTGCAACTTG+GGG 0.696352 2_2:+37014481 Msa0249670:three_prime_UTR
TTCTTAATCACTAGACAATG+GGG 0.702647 2_2:+37013642 Msa0249670:intron
TGTGCTACTAGCTACACAGA+GGG 0.720328 2_2:+37011404 Msa0249670:CDS
ATTCCTTTGAAGGAAAACCG+AGG 0.723762 2_2:+37014093 Msa0249670:CDS
AAAATCCATTGAGAGCAATG+TGG 0.729901 2_2:+37006681 Msa0249670:five_prime_UTR
TGTTTCTAACCAAAACCCTG+AGG 0.736420 2_2:-37014257 None:intergenic
ATTAGTGCACATATCAACTG+GGG 0.754100 2_2:+37009021 Msa0249670:CDS
TCAGCTTGGGATAAACTACG+AGG 0.765007 2_2:-37009314 None:intergenic
ATGTGCTACTAGCTACACAG+AGG 0.775103 2_2:+37011403 Msa0249670:CDS

CRISPR-GE

badsite warning sgRNA_sequence Strand Position Region GC_content
!! TATATATATATATATATATA+GGG - chr2_2:37012628-37012647 None:intergenic 0.0%
!! ATATATATATATATATATAT+AGG - chr2_2:37012629-37012648 None:intergenic 0.0%
!!! TTTTTTTATTCTTTTTGATA+AGG + chr2_2:37006983-37007002 Msa0249670:intron 10.0%
!!! AAACATAGTTAATATATTTT+TGG - chr2_2:37008335-37008354 None:intergenic 10.0%
!!! AATTAACATTTTACTTATAT+GGG + chr2_2:37012534-37012553 Msa0249670:intron 10.0%
!! TTAAATTAAAGAAGATGTAT+AGG + chr2_2:37007245-37007264 Msa0249670:intron 15.0%
!!! AATGATATTAATGGATAATT+GGG - chr2_2:37008153-37008172 None:intergenic 15.0%
!!! CATTGTAAAATAACTATTTT+TGG + chr2_2:37008722-37008741 Msa0249670:intron 15.0%
!! AAAAAGAAAAAGAAAACAAA+CGG - chr2_2:37009222-37009241 None:intergenic 15.0%
!! CTCATTAAATTAAGTTAATT+AGG - chr2_2:37009600-37009619 None:intergenic 15.0%
!! CTAATTAACTTAATTTAATG+AGG + chr2_2:37009598-37009617 Msa0249670:intron 15.0%
!!! ATTAGAAAATTTTAGTAACT+TGG - chr2_2:37009862-37009881 None:intergenic 15.0%
!!! ACTAAAATTTTCTAATATTC+AGG + chr2_2:37009866-37009885 Msa0249670:intron 15.0%
!! AAATAGATGGATAAAATAAA+AGG - chr2_2:37012478-37012497 None:intergenic 15.0%
!!! CAATTAACATTTTACTTATA+TGG + chr2_2:37012533-37012552 Msa0249670:intron 15.0%
!!! CAATTCTTTTTTCTATTTAT+AGG - chr2_2:37012687-37012706 None:intergenic 15.0%
!!! ATTAGTTTTGTATATTACAT+TGG - chr2_2:37013506-37013525 None:intergenic 15.0%
!! AAAAAACTAATAATAGATTG+AGG - chr2_2:37014288-37014307 None:intergenic 15.0%
!!! AACTGTATTGATAAATATTA+CGG + chr2_2:37014591-37014610 Msa0249670:three_prime_UTR 15.0%
!! TACTAGTATATATATATGTT+AGG - chr2_2:37014693-37014712 None:intergenic 15.0%
!!! GATTTTTGTTTACTAGTTAA+TGG + chr2_2:37006946-37006965 Msa0249670:intron 20.0%
!! ATGTGAATTGATTGTTAATA+AGG + chr2_2:37007091-37007110 Msa0249670:CDS 20.0%
!!! AATACTCATTTTATAAGTGA+GGG - chr2_2:37007187-37007206 None:intergenic 20.0%
!!! AAATACTCATTTTATAAGTG+AGG - chr2_2:37007188-37007207 None:intergenic 20.0%
!!! GAATGATATTAATGGATAAT+TGG - chr2_2:37008154-37008173 None:intergenic 20.0%
!!! TTCTAAAGGAATGATATTAA+TGG - chr2_2:37008162-37008181 None:intergenic 20.0%
!! TATGACAAAATTTCTTCTAA+AGG - chr2_2:37008176-37008195 None:intergenic 20.0%
!! TTAAAAAGAAAGAGATCTAT+AGG - chr2_2:37008232-37008251 None:intergenic 20.0%
!! AGAATATAAAACATTCCATT+TGG - chr2_2:37008395-37008414 None:intergenic 20.0%
!! ATATAAGTTGTTCGTTAATT+AGG + chr2_2:37008444-37008463 Msa0249670:intron 20.0%
!! ATGAAAAATAATGACACAAA+GGG - chr2_2:37008654-37008673 None:intergenic 20.0%
!! AATGAAAAATAATGACACAA+AGG - chr2_2:37008655-37008674 None:intergenic 20.0%
!! TTGTCGTTAAATAGAATAAA+AGG + chr2_2:37008751-37008770 Msa0249670:intron 20.0%
!!! TTGATTGTTATTGATAAAAG+TGG + chr2_2:37008917-37008936 Msa0249670:intron 20.0%
!!! GGAAATTTAATAAGATGTTT+TGG - chr2_2:37009496-37009515 None:intergenic 20.0%
!!! TAATCTAAAGTTATAGTAAC+TGG + chr2_2:37010264-37010283 Msa0249670:intron 20.0%
!!! ATTATCACTTGTTTTAGAAA+AGG + chr2_2:37010290-37010309 Msa0249670:intron 20.0%
!!! TTATCACTTGTTTTAGAAAA+GGG + chr2_2:37010291-37010310 Msa0249670:intron 20.0%
!! AAAATATAGACAGAAAGAAA+GGG - chr2_2:37010397-37010416 None:intergenic 20.0%
!!! GTACTTATTTAATCATTTTC+AGG + chr2_2:37010522-37010541 Msa0249670:intron 20.0%
!! AAATAAGAAGTGATATACAA+AGG - chr2_2:37011289-37011308 None:intergenic 20.0%
!!! TAATTTTCTGAAAGTAATAC+TGG - chr2_2:37011589-37011608 None:intergenic 20.0%
!! CTATAACTTATATATAACTG+AGG + chr2_2:37011744-37011763 Msa0249670:intron 20.0%
!!! AACCATATATTTTTGTATAC+AGG + chr2_2:37011979-37011998 Msa0249670:intron 20.0%
!! ATCCTGTATACAAAAATATA+TGG - chr2_2:37011984-37012003 None:intergenic 20.0%
!! TTCTTTATGTAGAGATTAAA+TGG + chr2_2:37012120-37012139 Msa0249670:intron 20.0%
!! AAATAAAAGGTTAGACATTA+AGG - chr2_2:37012465-37012484 None:intergenic 20.0%
!!! ATTTTATCCATCTATTTTCT+TGG + chr2_2:37012481-37012500 Msa0249670:intron 20.0%
!!! TTCTTTTTTCTATTTATAGG+AGG - chr2_2:37012684-37012703 None:intergenic 20.0%
!! ATAAGGAAAATATATCAGTA+TGG - chr2_2:37012798-37012817 None:intergenic 20.0%
!!! ATACTGATATATTTTCCTTA+TGG + chr2_2:37012797-37012816 Msa0249670:intron 20.0%
!! GAATTGTATTATTGATGTAA+GGG + chr2_2:37012932-37012951 Msa0249670:intron 20.0%
!! AATTGTATTATTGATGTAAG+GGG + chr2_2:37012933-37012952 Msa0249670:intron 20.0%
!!! ACATATCTTAATATTTTCTG+AGG + chr2_2:37013071-37013090 Msa0249670:intron 20.0%
!! TACCATGTTACAATATAATT+AGG - chr2_2:37013339-37013358 None:intergenic 20.0%
!! ATTTATTCGAGAGAAAAATA+AGG + chr2_2:37013606-37013625 Msa0249670:intron 20.0%
!!! ATATTTCTGTCATTAAACTA+TGG + chr2_2:37013781-37013800 Msa0249670:intron 20.0%
!! AAGTATAAACTTAGATCAAT+AGG - chr2_2:37013939-37013958 None:intergenic 20.0%
!!! TTCAGAAAATTTAAGACTAA+AGG - chr2_2:37014319-37014338 None:intergenic 20.0%
!!! ACTGTATTGATAAATATTAC+GGG + chr2_2:37014592-37014611 Msa0249670:three_prime_UTR 20.0%
!! TATATATATGTTAGGTAACA+AGG - chr2_2:37014685-37014704 None:intergenic 20.0%
! GAAGAAAATAAAAGAGAATG+AGG - chr2_2:37006778-37006797 None:intergenic 25.0%
! TAAATTCATTAACGAACCTT+GGG - chr2_2:37006907-37006926 None:intergenic 25.0%
! ATAAATTCATTAACGAACCT+TGG - chr2_2:37006908-37006927 None:intergenic 25.0%
!! GTATTTCAAGTGAAAAAAGA+GGG - chr2_2:37007141-37007160 None:intergenic 25.0%
!! AGTATTTCAAGTGAAAAAAG+AGG - chr2_2:37007142-37007161 None:intergenic 25.0%
!!! CTTTTTTCACTTGAAATACT+CGG + chr2_2:37007142-37007161 Msa0249670:intron 25.0%
! TACGAAATTCTGTAATTGAT+AGG - chr2_2:37007476-37007495 None:intergenic 25.0%
! AGTAATTCAAAAACCAATTG+TGG - chr2_2:37007552-37007571 None:intergenic 25.0%
!!! ACAATTGGTTTTTGAATTAC+TGG + chr2_2:37007551-37007570 Msa0249670:intron 25.0%
!! AAATTTTCTAACCCAGTATT+AGG - chr2_2:37007585-37007604 None:intergenic 25.0%
! ATATTGAACACATACAAGAA+GGG - chr2_2:37007830-37007849 None:intergenic 25.0%
!! TTTAGATCAAAACCAAGTTT+TGG - chr2_2:37007973-37007992 None:intergenic 25.0%
!! TATTAATGGATAATTGGGTA+TGG - chr2_2:37008148-37008167 None:intergenic 25.0%
! ATATAAAACATTCCATTTGG+TGG - chr2_2:37008392-37008411 None:intergenic 25.0%
! AATGTGCATTCATAGAAATA+AGG + chr2_2:37008953-37008972 Msa0249670:intron 25.0%
! ATGTGCATTCATAGAAATAA+GGG + chr2_2:37008954-37008973 Msa0249670:intron 25.0%
! TAGTAATTGCATACTATTGA+AGG + chr2_2:37009400-37009419 Msa0249670:intron 25.0%
!!! ACTATTGAAGGATCTTTTTT+CGG + chr2_2:37009412-37009431 Msa0249670:intron 25.0%
! TTCTGTTTGCAAAGAATTAA+TGG - chr2_2:37009448-37009467 None:intergenic 25.0%
!!! TTTTCTGGCTTTAAGAAAAT+TGG - chr2_2:37009517-37009536 None:intergenic 25.0%
!! CCAATATTTGATGAATTTTC+TGG - chr2_2:37009532-37009551 None:intergenic 25.0%
! CCAGAAAATTCATCAAATAT+TGG + chr2_2:37009529-37009548 Msa0249670:intron 25.0%
!!! AAAATTTTAGTAACTTGGCA+AGG - chr2_2:37009857-37009876 None:intergenic 25.0%
! TTCATCATTGCAATAAGAAA+AGG + chr2_2:37010129-37010148 Msa0249670:intron 25.0%
! CAAACTCAAAAAGTTATTCA+TGG - chr2_2:37010193-37010212 None:intergenic 25.0%
!!! TATCACTTGTTTTAGAAAAG+GGG + chr2_2:37010292-37010311 Msa0249670:intron 25.0%
! CAAAATATAGACAGAAAGAA+AGG - chr2_2:37010398-37010417 None:intergenic 25.0%
!! TCTATATTTTGTGTCTCATT+TGG + chr2_2:37010407-37010426 Msa0249670:intron 25.0%
!! CTATATTTTGTGTCTCATTT+GGG + chr2_2:37010408-37010427 Msa0249670:intron 25.0%
!! CATTTTGCTTATAGATGTTT+AGG - chr2_2:37010558-37010577 None:intergenic 25.0%
! TTACTCAAACATAACAAAGA+AGG + chr2_2:37010597-37010616 Msa0249670:CDS 25.0%
! ATTGCCACTATTAACTTATT+TGG + chr2_2:37010675-37010694 Msa0249670:CDS 25.0%
! TATGCCAAATAAGTTAATAG+TGG - chr2_2:37010682-37010701 None:intergenic 25.0%
!!! TCTTTGAAAACTTCTTCTTT+TGG - chr2_2:37010727-37010746 None:intergenic 25.0%
! AATTCCCTACAAATATATCA+TGG - chr2_2:37010845-37010864 None:intergenic 25.0%
! GAAACTTCACTTACATTTAT+TGG + chr2_2:37011043-37011062 Msa0249670:intron 25.0%
! TTTACATTTAGAAGTAGTGT+CGG - chr2_2:37011653-37011672 None:intergenic 25.0%
!! GTTTTCATTCCAAATCTAAT+AGG + chr2_2:37011872-37011891 Msa0249670:intron 25.0%
! AGACAATAAGAGAAAATCAA+AGG - chr2_2:37011953-37011972 None:intergenic 25.0%
!!! TCGAAAGATTTTAGAATTCA+TGG + chr2_2:37012270-37012289 Msa0249670:CDS 25.0%
!!! AGATTTTAGAATTCATGGAT+TGG + chr2_2:37012275-37012294 Msa0249670:CDS 25.0%
!!! GATTTTAGAATTCATGGATT+GGG + chr2_2:37012276-37012295 Msa0249670:CDS 25.0%
!!! ATTTTAGAATTCATGGATTG+GGG + chr2_2:37012277-37012296 Msa0249670:CDS 25.0%
! AACCAGTTAAAATACAAAAG+CGG - chr2_2:37012403-37012422 None:intergenic 25.0%
! TCATATTGTGAGTATCTATA+CGG + chr2_2:37012757-37012776 Msa0249670:intron 25.0%
!!! CTTATGGTTTGTTTTGATAT+CGG + chr2_2:37012813-37012832 Msa0249670:intron 25.0%
! GGAATTGTATTATTGATGTA+AGG + chr2_2:37012931-37012950 Msa0249670:intron 25.0%
!!! ATCTTAATATTTTCTGAGGT+TGG + chr2_2:37013075-37013094 Msa0249670:intron 25.0%
! ATAAACATGAACTACAGTAT+AGG - chr2_2:37013191-37013210 None:intergenic 25.0%
! GACCTAATTATATTGTAACA+TGG + chr2_2:37013334-37013353 Msa0249670:intron 25.0%
!! ATAGAATATCTTTGTTTGCA+TGG + chr2_2:37013411-37013430 Msa0249670:intron 25.0%
! TAATACATTTCTATGAATCC+AGG + chr2_2:37013522-37013541 Msa0249670:intron 25.0%
! GAAAACACGTTGAAATATTT+CGG - chr2_2:37013862-37013881 None:intergenic 25.0%
!! AAATATTTCAACGTGTTTTC+AGG + chr2_2:37013862-37013881 Msa0249670:intron 25.0%
! GAAATTAATGATTCCTTTGA+AGG + chr2_2:37014083-37014102 Msa0249670:CDS 25.0%
!!! TTTTCTGAAGCTATTTTCAT+TGG + chr2_2:37014330-37014349 Msa0249670:intron 25.0%
! AATATAACTAGTATCATGTG+AGG - chr2_2:37014618-37014637 None:intergenic 25.0%
GATATTGAGTGTTAAAGTTG+TGG - chr2_2:37006840-37006859 None:intergenic 30.0%
! TTTTGATAAGGCAACAAGAA+AGG + chr2_2:37006995-37007014 Msa0249670:intron 30.0%
AACTAAACCAGCACAAAATA+AGG - chr2_2:37007341-37007360 None:intergenic 30.0%
! TTGTGTTATTCACAAAGCAA+TGG - chr2_2:37007387-37007406 None:intergenic 30.0%
! GGTTAGAAAATTTTGCATGA+TGG + chr2_2:37007592-37007611 Msa0249670:intron 30.0%
GATATTGAACACATACAAGA+AGG - chr2_2:37007831-37007850 None:intergenic 30.0%
TGCTTATATTTCATTCGAGA+AGG + chr2_2:37008270-37008289 Msa0249670:intron 30.0%
! GTAACATTTTTCTCTGTTCA+AGG - chr2_2:37008545-37008564 None:intergenic 30.0%
CAGTGATAGATATTATGAGA+CGG + chr2_2:37008852-37008871 Msa0249670:intron 30.0%
TGACTTTCAGCATATGAAAA+TGG - chr2_2:37009194-37009213 None:intergenic 30.0%
AAGAAAAAGAAAACAAACGG+AGG - chr2_2:37009219-37009238 None:intergenic 30.0%
! TTTTCTTTTTCCCTTGTAGA+TGG + chr2_2:37009232-37009251 Msa0249670:intron 30.0%
TGCAAAGATGTTAAGCAAAA+AGG + chr2_2:37009272-37009291 Msa0249670:CDS 30.0%
GCAAAGATGTTAAGCAAAAA+GGG + chr2_2:37009273-37009292 Msa0249670:CDS 30.0%
TCTAATACGATATACACATC+AGG - chr2_2:37009365-37009384 None:intergenic 30.0%
! ATGCACATAAAGACTTTTAC+TGG + chr2_2:37009734-37009753 Msa0249670:intron 30.0%
GCAAAAAAGATAAGAAAACG+AGG - chr2_2:37010055-37010074 None:intergenic 30.0%
TGTATCATCTGAAAATGTGT+CGG + chr2_2:37010100-37010119 Msa0249670:intron 30.0%
!!! AACTTTTTGAGTTTGTTGCA+TGG + chr2_2:37010198-37010217 Msa0249670:intron 30.0%
TTCTCTAGTAATAGCACTAA+GGG + chr2_2:37010239-37010258 Msa0249670:intron 30.0%
! TCTAAAGTTATAGTAACTGG+TGG + chr2_2:37010267-37010286 Msa0249670:intron 30.0%
CAGATTATGCATAGTAGAAA+TGG - chr2_2:37010447-37010466 None:intergenic 30.0%
CATTTCTACTATGCATAATC+TGG + chr2_2:37010445-37010464 Msa0249670:intron 30.0%
AGGTAGTCATTAAGTAAATC+TGG + chr2_2:37010476-37010495 Msa0249670:intron 30.0%
! CTTTGTTATGTTTGAGTAAG+AGG - chr2_2:37010596-37010615 None:intergenic 30.0%
TTGGCATATTTACAGATTGA+TGG + chr2_2:37010694-37010713 Msa0249670:CDS 30.0%
! TGAAAACTTCTTCTTTTGGA+CGG - chr2_2:37010723-37010742 None:intergenic 30.0%
AGAGTGAAAATAGTGAAATC+TGG + chr2_2:37010781-37010800 Msa0249670:CDS 30.0%
AATTACATCTTTCTGCGATT+CGG + chr2_2:37010982-37011001 Msa0249670:intron 30.0%
!!! TTCGGTTTTGTTATGATATG+AGG + chr2_2:37011000-37011019 Msa0249670:intron 30.0%
!!! TCGGTTTTGTTATGATATGA+GGG + chr2_2:37011001-37011020 Msa0249670:intron 30.0%
!! TTTATTGGTCTTGATTGACA+TGG + chr2_2:37011058-37011077 Msa0249670:intron 30.0%
!!! ATTTTGCTTTAGCTTGTTAC+AGG + chr2_2:37011305-37011324 Msa0249670:intron 30.0%
!! TTAGCTTGTTACAGGATAAA+TGG + chr2_2:37011313-37011332 Msa0249670:intron 30.0%
! GGAATGTTATTTAGTCTAGT+AGG - chr2_2:37011348-37011367 None:intergenic 30.0%
TGATGGAAAAACTAGGTTAA+AGG + chr2_2:37011434-37011453 Msa0249670:CDS 30.0%
ATTAAAAACAAGACAAGTCC+GGG - chr2_2:37011818-37011837 None:intergenic 30.0%
CATTAAAAACAAGACAAGTC+CGG - chr2_2:37011819-37011838 None:intergenic 30.0%
GAAGAAGATATCATCAGAAT+AGG - chr2_2:37011851-37011870 None:intergenic 30.0%
TGATGTCAACCTATTAGATT+TGG - chr2_2:37011884-37011903 None:intergenic 30.0%
AATTGAATCCAGAAATGGTA+CGG + chr2_2:37011913-37011932 Msa0249670:intron 30.0%
ATACAGGATGTTTATCGAAT+TGG + chr2_2:37011995-37012014 Msa0249670:intron 30.0%
ATGTTAGAACAAAAGGAGTA+AGG - chr2_2:37012092-37012111 None:intergenic 30.0%
GTGTTGTATGTTAGAACAAA+AGG - chr2_2:37012099-37012118 None:intergenic 30.0%
!!! GCTTTTGTATTTTAACTGGT+TGG + chr2_2:37012402-37012421 Msa0249670:intron 30.0%
GATACTCACAATATGATGTT+CGG - chr2_2:37012753-37012772 None:intergenic 30.0%
CATATTGTGAGTATCTATAC+GGG + chr2_2:37012758-37012777 Msa0249670:intron 30.0%
CGATATCAAAACAAACCATA+AGG - chr2_2:37012815-37012834 None:intergenic 30.0%
ACTTGTGAATTTCTAATCTC+AGG + chr2_2:37012846-37012865 Msa0249670:intron 30.0%
AATCCATCAAGCTAAATAGA+AGG - chr2_2:37013005-37013024 None:intergenic 30.0%
GTTGGATATACAGGATTTAA+AGG + chr2_2:37013093-37013112 Msa0249670:intron 30.0%
!! TTAGCATTGATTAGGATAAC+TGG - chr2_2:37013145-37013164 None:intergenic 30.0%
TTACAAGTTGTAATATCCCT+GGG - chr2_2:37013441-37013460 None:intergenic 30.0%
TGAATGAACTGTTCAAAAAG+GGG - chr2_2:37013464-37013483 None:intergenic 30.0%
GTGAATGAACTGTTCAAAAA+GGG - chr2_2:37013465-37013484 None:intergenic 30.0%
TGTGAATGAACTGTTCAAAA+AGG - chr2_2:37013466-37013485 None:intergenic 30.0%
AATTGTTATCTTCAACTTGC+TGG - chr2_2:37013589-37013608 None:intergenic 30.0%
TCTTCTTAATCACTAGACAA+TGG + chr2_2:37013640-37013659 Msa0249670:intron 30.0%
CTTCTTAATCACTAGACAAT+GGG + chr2_2:37013641-37013660 Msa0249670:intron 30.0%
TTCTTAATCACTAGACAATG+GGG + chr2_2:37013642-37013661 Msa0249670:intron 30.0%
! TTGAAAGTTGCTACTTGTTT+CGG + chr2_2:37013696-37013715 Msa0249670:intron 30.0%
GGAATCATTAATTTCATCCA+CGG - chr2_2:37014078-37014097 None:intergenic 30.0%
CCAAGTGATTATGGTAAAAT+CGG + chr2_2:37014460-37014479 Msa0249670:three_prime_UTR 30.0%
ATCTTGAGAATTTCAGAAGA+GGG + chr2_2:37014546-37014565 Msa0249670:three_prime_UTR 30.0%
AACAAGGAGAAATTATCAAC+TGG - chr2_2:37014669-37014688 None:intergenic 30.0%
AAAATCCATTGAGAGCAATG+TGG + chr2_2:37006681-37006700 Msa0249670:five_prime_UTR 35.0%
TTCAAGTGAAAAAAGAGGGA+GGG - chr2_2:37007137-37007156 None:intergenic 35.0%
! TTTCAAGTGAAAAAAGAGGG+AGG - chr2_2:37007138-37007157 None:intergenic 35.0%
TTCCGATGAATGAATTAACG+CGG - chr2_2:37007218-37007237 None:intergenic 35.0%
CACAAAATAAGGAATTCCAG+AGG - chr2_2:37007330-37007349 None:intergenic 35.0%
!!! TGGAATTCCTTATTTTGTGC+TGG + chr2_2:37007331-37007350 Msa0249670:intron 35.0%
AATTCACACACTCTCATGTA+AGG + chr2_2:37007409-37007428 Msa0249670:intron 35.0%
TATACGTCAAATCCTCAATG+AGG - chr2_2:37007452-37007471 None:intergenic 35.0%
!! TGGTTCTAACTCCTAATACT+GGG + chr2_2:37007571-37007590 Msa0249670:intron 35.0%
!! CAGTCTTTGAAGTATAGTGT+TGG - chr2_2:37007638-37007657 None:intergenic 35.0%
CAACACTATACTTCAAAGAC+TGG + chr2_2:37007636-37007655 Msa0249670:intron 35.0%
! AGAATCATAGAAAGCATGAG+TGG - chr2_2:37007700-37007719 None:intergenic 35.0%
GCTTTCTATGATTCTTGCTT+TGG + chr2_2:37007705-37007724 Msa0249670:intron 35.0%
AGGATGTCTTTAACTCGTTA+TGG + chr2_2:37007774-37007793 Msa0249670:intron 35.0%
AACACATACAAGAAGGGAAT+TGG - chr2_2:37007824-37007843 None:intergenic 35.0%
TATGTGTTCAATATCAACCG+TGG + chr2_2:37007836-37007855 Msa0249670:intron 35.0%
!! TTTTGGAAGACTACTAGACA+AGG - chr2_2:37007929-37007948 None:intergenic 35.0%
!!! TGTCTGTACACTCTTGTTTT+TGG - chr2_2:37007946-37007965 None:intergenic 35.0%
TACAGACAATTGCCAAAACT+TGG + chr2_2:37007958-37007977 Msa0249670:intron 35.0%
!! ATCGGCTGTGTTGATTAAAT+CGG + chr2_2:37008025-37008044 Msa0249670:intron 35.0%
AGCTTATTCTATACACTGGA+AGG - chr2_2:37008054-37008073 None:intergenic 35.0%
!! ATGAGCGCTGATTGAAAAAT+GGG - chr2_2:37008106-37008125 None:intergenic 35.0%
!! AATGAGCGCTGATTGAAAAA+TGG - chr2_2:37008107-37008126 None:intergenic 35.0%
TATGGAAACACATAGGTTTG+TGG - chr2_2:37008130-37008149 None:intergenic 35.0%
AATTGGGTATGGAAACACAT+AGG - chr2_2:37008137-37008156 None:intergenic 35.0%
AGATCTATAGGTCAGAATCT+GGG - chr2_2:37008220-37008239 None:intergenic 35.0%
! TAAAACATTCCATTTGGTGG+TGG - chr2_2:37008389-37008408 None:intergenic 35.0%
AGGACAGTTTGAGTAACAAA+TGG + chr2_2:37008464-37008483 Msa0249670:intron 35.0%
GAACAGAGAAAAATGTTACG+AGG + chr2_2:37008546-37008565 Msa0249670:intron 35.0%
GATAGATATTATGAGACGGA+AGG + chr2_2:37008856-37008875 Msa0249670:intron 35.0%
GATTAGTGCACATATCAACT+GGG + chr2_2:37009020-37009039 Msa0249670:CDS 35.0%
ATTAGTGCACATATCAACTG+GGG + chr2_2:37009021-37009040 Msa0249670:CDS 35.0%
AAGATGTTAAGCAAAAAGGG+TGG + chr2_2:37009276-37009295 Msa0249670:CDS 35.0%
TTTCTCTAGACTTTCAGCTT+GGG - chr2_2:37009330-37009349 None:intergenic 35.0%
! TTTTCTCTAGACTTTCAGCT+TGG - chr2_2:37009331-37009350 None:intergenic 35.0%
!!! AAGGATCTTTTTTCGGATGT+TGG + chr2_2:37009419-37009438 Msa0249670:intron 35.0%
AAAGCGCATACATTACTCAA+TGG - chr2_2:37009800-37009819 None:intergenic 35.0%
!!! TCATGAGAAATTTTTTCCGC+CGG + chr2_2:37009956-37009975 Msa0249670:CDS 35.0%
AGACAGAAGAAATCAAAGCA+AGG + chr2_2:37009979-37009998 Msa0249670:CDS 35.0%
!! ACTTTTTCTTCAGTGTCATC+AGG - chr2_2:37010017-37010036 None:intergenic 35.0%
!!! TATCTTTTTTGCTGTCTTCG+TGG + chr2_2:37010063-37010082 Msa0249670:intron 35.0%
! CTTAGTGCTATTACTAGAGA+AGG - chr2_2:37010240-37010259 None:intergenic 35.0%
CTTCTCTAGTAATAGCACTA+AGG + chr2_2:37010238-37010257 Msa0249670:intron 35.0%
!!! CTTGTTTTAGAAAAGGGGAT+TGG + chr2_2:37010297-37010316 Msa0249670:intron 35.0%
! TGCATAATCTGGAAGCATAA+AGG + chr2_2:37010456-37010475 Msa0249670:intron 35.0%
ACTGGTTGACATTATTGTCA+TGG - chr2_2:37010650-37010669 None:intergenic 35.0%
ATGACAATAATGTCAACCAG+TGG + chr2_2:37010649-37010668 Msa0249670:CDS 35.0%
TGACAATAATGTCAACCAGT+GGG + chr2_2:37010650-37010669 Msa0249670:CDS 35.0%
GTGAAAATAGTGAAATCTGG+AGG + chr2_2:37010784-37010803 Msa0249670:CDS 35.0%
ATGGCTGGAGATTGAAAAAT+AGG - chr2_2:37010826-37010845 None:intergenic 35.0%
TCCAGCCATGATATATTTGT+AGG + chr2_2:37010837-37010856 Msa0249670:intron 35.0%
CCAGCCATGATATATTTGTA+GGG + chr2_2:37010838-37010857 Msa0249670:intron 35.0%
! TATTCAGAAAAACCGATTCC+TGG + chr2_2:37011154-37011173 Msa0249670:intron 35.0%
!! GAAGCTTTTCTAGCACATAA+AGG - chr2_2:37011267-37011286 None:intergenic 35.0%
TTGTTACAGGATAAATGGAG+AGG + chr2_2:37011318-37011337 Msa0249670:intron 35.0%
TTTCCTCATTTCTCGAGAAT+GGG - chr2_2:37011370-37011389 None:intergenic 35.0%
ATTTCCTCATTTCTCGAGAA+TGG - chr2_2:37011371-37011390 None:intergenic 35.0%
!! CCTAGTTTTTCCATCATTGA+TGG - chr2_2:37011430-37011449 None:intergenic 35.0%
! CCATCAATGATGGAAAAACT+AGG + chr2_2:37011427-37011446 Msa0249670:CDS 35.0%
TTGCCATTCTTCCTGTTATT+TGG + chr2_2:37011480-37011499 Msa0249670:intron 35.0%
! TGCCATTCTTCCTGTTATTT+GGG + chr2_2:37011481-37011500 Msa0249670:intron 35.0%
AACTGAGGTGAATGAAGTTT+AGG + chr2_2:37011759-37011778 Msa0249670:intron 35.0%
GATGGTCAGATGGAAAAAAT+AGG + chr2_2:37011781-37011800 Msa0249670:intron 35.0%
AAATAGGTTTCACAGTTTCC+CGG + chr2_2:37011797-37011816 Msa0249670:intron 35.0%
TCCTGAATTGAATCCAGAAA+TGG + chr2_2:37011908-37011927 Msa0249670:CDS 35.0%
! ACCATTTCTGGATTCAATTC+AGG - chr2_2:37011912-37011931 None:intergenic 35.0%
AAAAATGTCCGTACCATTTC+TGG - chr2_2:37011924-37011943 None:intergenic 35.0%
TTATCGAATTGGTACACTGT+TGG + chr2_2:37012006-37012025 Msa0249670:CDS 35.0%
! CTTTACACGTTTTCCATCAT+TGG - chr2_2:37012062-37012081 None:intergenic 35.0%
! CAATGATGGAAAACGTGTAA+AGG + chr2_2:37012060-37012079 Msa0249670:CDS 35.0%
AAAGGAACCTTCATCAACAT+TGG + chr2_2:37012313-37012332 Msa0249670:CDS 35.0%
! TATGGAACCAATGTTGATGA+AGG - chr2_2:37012323-37012342 None:intergenic 35.0%
!! TTCATCAACATTGGTTCCAT+AGG + chr2_2:37012322-37012341 Msa0249670:CDS 35.0%
TCAGCTCATTGATATACCTA+TGG - chr2_2:37012341-37012360 None:intergenic 35.0%
TCAATGAGCTGAAACCTTTA+TGG + chr2_2:37012349-37012368 Msa0249670:intron 35.0%
!!! TGCCGCTTTTGTATTTTAAC+TGG + chr2_2:37012398-37012417 Msa0249670:intron 35.0%
!!! GTATTTTAACTGGTTGGAGT+TGG + chr2_2:37012408-37012427 Msa0249670:intron 35.0%
TGGATGACCAAGAAAATAGA+TGG - chr2_2:37012491-37012510 None:intergenic 35.0%
GCAAGATGACATGTATTTCT+TGG + chr2_2:37012887-37012906 Msa0249670:CDS 35.0%
AGATGACATGTATTTCTTGG+TGG + chr2_2:37012890-37012909 Msa0249670:CDS 35.0%
AAGCTAAATAGAAGGTTCAG+AGG - chr2_2:37012997-37013016 None:intergenic 35.0%
!! GAACCTTCTATTTAGCTTGA+TGG + chr2_2:37012999-37013018 Msa0249670:intron 35.0%
TGAAGAAAACAATAGCAGCT+TGG - chr2_2:37013052-37013071 None:intergenic 35.0%
!!! TTTTCTGAGGTTGGATATAC+AGG + chr2_2:37013084-37013103 Msa0249670:intron 35.0%
!! CCTTAAGCTTAGCATTGATT+AGG - chr2_2:37013153-37013172 None:intergenic 35.0%
CCTAATCAATGCTAAGCTTA+AGG + chr2_2:37013150-37013169 Msa0249670:CDS 35.0%
ACAGTATAGGAAACTAGGAA+AGG - chr2_2:37013178-37013197 None:intergenic 35.0%
GAACTACAGTATAGGAAACT+AGG - chr2_2:37013183-37013202 None:intergenic 35.0%
! GGTTATGAGTTCATCAGTTT+TGG - chr2_2:37013281-37013300 None:intergenic 35.0%
GTTACAAGTTGTAATATCCC+TGG - chr2_2:37013442-37013461 None:intergenic 35.0%
!!! CGGATTTTAGAATCCGAATA+GGG - chr2_2:37013842-37013861 None:intergenic 35.0%
!!! TCGGATTTTAGAATCCGAAT+AGG - chr2_2:37013843-37013862 None:intergenic 35.0%
ATGAATTATTCCACCCTATG+AGG - chr2_2:37013898-37013917 None:intergenic 35.0%
ACTTCACTGCTTTATGATGT+AGG + chr2_2:37013955-37013974 Msa0249670:intron 35.0%
! AGTACATACTTCTCTTTTCC+CGG - chr2_2:37014029-37014048 None:intergenic 35.0%
TCATTAATTTCATCCACGGT+AGG - chr2_2:37014074-37014093 None:intergenic 35.0%
GATAAGAAGATCTAGTACCT+CGG - chr2_2:37014113-37014132 None:intergenic 35.0%
! ATGTACCTATTTTCTTGTGC+AGG + chr2_2:37014357-37014376 Msa0249670:intron 35.0%
! TGTACCTATTTTCTTGTGCA+GGG + chr2_2:37014358-37014377 Msa0249670:intron 35.0%
GACAATTTGCCAAGTGATTA+TGG + chr2_2:37014451-37014470 Msa0249670:three_prime_UTR 35.0%
! CCGATTTTACCATAATCACT+TGG - chr2_2:37014463-37014482 None:intergenic 35.0%
GATCTTGAGAATTTCAGAAG+AGG + chr2_2:37014545-37014564 Msa0249670:three_prime_UTR 35.0%
!! TGCTCTCAATGGATTTTCAG+TGG - chr2_2:37006678-37006697 None:intergenic 40.0%
TGAGGAAGAAGAGTTCTTGA+GGG - chr2_2:37006760-37006779 None:intergenic 40.0%
ATGAGGAAGAAGAGTTCTTG+AGG - chr2_2:37006761-37006780 None:intergenic 40.0%
GAGTGTTAAAGTTGTGGTGT+TGG - chr2_2:37006834-37006853 None:intergenic 40.0%
CTTGGGTCTTAATGGCAAAT+TGG - chr2_2:37006890-37006909 None:intergenic 40.0%
CAATTTGCCATTAAGACCCA+AGG + chr2_2:37006888-37006907 Msa0249670:CDS 40.0%
TAACGAACCTTGGGTCTTAA+TGG - chr2_2:37006898-37006917 None:intergenic 40.0%
CCTGATATCATCACCTTCAA+TGG - chr2_2:37007044-37007063 None:intergenic 40.0%
CCATTGAAGGTGATGATATC+AGG + chr2_2:37007041-37007060 Msa0249670:CDS 40.0%
CTCCGCGTTAATTCATTCAT+CGG + chr2_2:37007213-37007232 Msa0249670:intron 40.0%
TTGTTGTATGTCGCATAGTG+TGG + chr2_2:37007293-37007312 Msa0249670:intron 40.0%
TGTTGTATGTCGCATAGTGT+GGG + chr2_2:37007294-37007313 Msa0249670:intron 40.0%
AATGGTTAAGCTCTGCCAAT+CGG - chr2_2:37007369-37007388 None:intergenic 40.0%
ACTTACACCAGTTGTGACTT+GGG - chr2_2:37007505-37007524 None:intergenic 40.0%
GTGGAAGGTCTAAACATCTT+TGG + chr2_2:37007523-37007542 Msa0249670:intron 40.0%
ACATCTTTGGCAACCACAAT+TGG + chr2_2:37007536-37007555 Msa0249670:intron 40.0%
!! CTGGTTCTAACTCCTAATAC+TGG + chr2_2:37007570-37007589 Msa0249670:intron 40.0%
!! CTTTGAAGTATAGTGTTGGC+AGG - chr2_2:37007634-37007653 None:intergenic 40.0%
ACTGGTAAGAAACAGATGTG+AGG + chr2_2:37007654-37007673 Msa0249670:intron 40.0%
!!! CTTTGGTAGTGTTTGCCTTT+TGG + chr2_2:37007722-37007741 Msa0249670:intron 40.0%
GAGATGTTCTTCCTACCAAA+AGG - chr2_2:37007740-37007759 None:intergenic 40.0%
CATCTCTACAAGCTCTTCAT+AGG + chr2_2:37007754-37007773 Msa0249670:intron 40.0%
! AAGGGAATTGGTCTGAAGTT+TGG - chr2_2:37007812-37007831 None:intergenic 40.0%
CCATATTGGTATCAGTTCCA+CGG - chr2_2:37007856-37007875 None:intergenic 40.0%
CGTGGAACTGATACCAATAT+GGG + chr2_2:37007854-37007873 Msa0249670:intron 40.0%
TTAATCAACACAGCCGATAC+AGG - chr2_2:37008023-37008042 None:intergenic 40.0%
CCAGTGTATAGAATAAGCTG+CGG + chr2_2:37008055-37008074 Msa0249670:intron 40.0%
!! TGAGCGCTGATTGAAAAATG+GGG - chr2_2:37008105-37008124 None:intergenic 40.0%
GTCAGAATCTGGGTTATTTG+TGG - chr2_2:37008210-37008229 None:intergenic 40.0%
GAGATCTATAGGTCAGAATC+TGG - chr2_2:37008221-37008240 None:intergenic 40.0%
! TTTCATTCGAGAAGGTGCAT+TGG + chr2_2:37008278-37008297 Msa0249670:intron 40.0%
TCAATTCAACCACCACCAAA+TGG + chr2_2:37008377-37008396 Msa0249670:intron 40.0%
GAAAAATGTTACGAGGCAGA+AGG + chr2_2:37008553-37008572 Msa0249670:intron 40.0%
GCATTCATAGAAATAAGGGC+TGG + chr2_2:37008958-37008977 Msa0249670:intron 40.0%
AGACACAACGCATATGATCA+GGG - chr2_2:37008986-37009005 None:intergenic 40.0%
ATGTGCACTAATCCATACTG+CGG - chr2_2:37009013-37009032 None:intergenic 40.0%
! GGATTAGTGCACATATCAAC+TGG + chr2_2:37009019-37009038 Msa0249670:CDS 40.0%
GCAAAAGAGTTCATGAATGC+TGG + chr2_2:37009091-37009110 Msa0249670:CDS 40.0%
ACAGCTGTCACAATTTCATC+AGG - chr2_2:37009127-37009146 None:intergenic 40.0%
! TCTTTTTCCCTTGTAGATGG+TGG + chr2_2:37009235-37009254 Msa0249670:intron 40.0%
ATTCTGATCGACAGATGTGT+TGG + chr2_2:37009900-37009919 Msa0249670:CDS 40.0%
AGAAGGTTAGATCCAGTAAC+TGG + chr2_2:37009924-37009943 Msa0249670:CDS 40.0%
TGATAGATCTTGCCAGTTAC+TGG - chr2_2:37009939-37009958 None:intergenic 40.0%
! GCTTTGATTTCTTCTGTCTC+CGG - chr2_2:37009978-37009997 None:intergenic 40.0%
TTTCTTCAGTGTCATCAGGA+CGG - chr2_2:37010013-37010032 None:intergenic 40.0%
TGTCTTCGTGGATATATCAC+TGG + chr2_2:37010075-37010094 Msa0249670:intron 40.0%
GTCTTCGTGGATATATCACT+GGG + chr2_2:37010076-37010095 Msa0249670:intron 40.0%
!! GAAAAGGGGATTGGTTCTAA+AGG + chr2_2:37010306-37010325 Msa0249670:intron 40.0%
CCCTACAAATATATCATGGC+TGG - chr2_2:37010841-37010860 None:intergenic 40.0%
! CGATGTCGATTGTTAAACTC+TGG - chr2_2:37010927-37010946 None:intergenic 40.0%
!! ATTGGTCTTGATTGACATGG+TGG + chr2_2:37011061-37011080 Msa0249670:intron 40.0%
!! TTGGTCTTGATTGACATGGT+GGG + chr2_2:37011062-37011081 Msa0249670:intron 40.0%
! ACCGATTCCTGGTATGAAAA+AGG + chr2_2:37011165-37011184 Msa0249670:CDS 40.0%
!! CCCTTTTTCATACCAGGAAT+CGG - chr2_2:37011169-37011188 None:intergenic 40.0%
CCGATTCCTGGTATGAAAAA+GGG + chr2_2:37011166-37011185 Msa0249670:CDS 40.0%
CGATTCCTGGTATGAAAAAG+GGG + chr2_2:37011167-37011186 Msa0249670:CDS 40.0%
AGACGGTAGTACTTAGTAGA+AGG + chr2_2:37011210-37011229 Msa0249670:intron 40.0%
!! GCTTTTCTAGCACATAAAGG+AGG - chr2_2:37011264-37011283 None:intergenic 40.0%
TTCCTCATTTCTCGAGAATG+GGG - chr2_2:37011369-37011388 None:intergenic 40.0%
CACCCAAATAACAGGAAGAA+TGG - chr2_2:37011486-37011505 None:intergenic 40.0%
! TCTAGAGTCACCCAAATAAC+AGG - chr2_2:37011494-37011513 None:intergenic 40.0%
GATGTCAGTGTTCTATAGGT+TGG - chr2_2:37011545-37011564 None:intergenic 40.0%
GTCTGATGTCAGTGTTCTAT+AGG - chr2_2:37011549-37011568 None:intergenic 40.0%
GAGGTGAATGAAGTTTAGGA+TGG + chr2_2:37011763-37011782 Msa0249670:intron 40.0%
! TGAAGTTTAGGATGGTCAGA+TGG + chr2_2:37011771-37011790 Msa0249670:intron 40.0%
!!! TCTTGTTTTTAATGCCCCTG+AGG + chr2_2:37011825-37011844 Msa0249670:intron 40.0%
TATCATCAGAATAGGCCTCA+GGG - chr2_2:37011843-37011862 None:intergenic 40.0%
ATATCATCAGAATAGGCCTC+AGG - chr2_2:37011844-37011863 None:intergenic 40.0%
GCACTTTCATTTGCCAATGA+TGG + chr2_2:37012046-37012065 Msa0249670:CDS 40.0%
TGAAATCAACTTTGTCCTGC+AGG + chr2_2:37012183-37012202 Msa0249670:intron 40.0%
!! TTCATGGATTGGGGTGATTA+TGG + chr2_2:37012286-37012305 Msa0249670:CDS 40.0%
ATTTCTAATCTCAGGTGCAG+CGG + chr2_2:37012854-37012873 Msa0249670:intron 40.0%
! CAATTCCCTACAGCATTTTG+AGG - chr2_2:37012918-37012937 None:intergenic 40.0%
ATTGATGTAAGGGGATAGAG+TGG + chr2_2:37012942-37012961 Msa0249670:intron 40.0%
! TAGGATAACTGGTCTGTGTT+CGG - chr2_2:37013134-37013153 None:intergenic 40.0%
AACTGATGAACTCATAACCG+AGG + chr2_2:37013282-37013301 Msa0249670:intron 40.0%
CCAGTGTACATTCGATAAAC+TGG - chr2_2:37013371-37013390 None:intergenic 40.0%
CCAGTTTATCGAATGTACAC+TGG + chr2_2:37013368-37013387 Msa0249670:intron 40.0%
! TTTGTTTGCATGGTTTTCCC+AGG + chr2_2:37013421-37013440 Msa0249670:intron 40.0%
! TTGTTTGCATGGTTTTCCCA+GGG + chr2_2:37013422-37013441 Msa0249670:intron 40.0%
TGCATAATACCACTAGAAGC+AGG - chr2_2:37013553-37013572 None:intergenic 40.0%
TTTCGGCTTCTCTATTATGC+AGG + chr2_2:37013713-37013732 Msa0249670:intron 40.0%
! CTCTTTTGTACAGCTCGTAA+CGG - chr2_2:37013995-37014014 None:intergenic 40.0%
! TTTTGTCCACCTTTCCTGAA+AGG + chr2_2:37014048-37014067 Msa0249670:CDS 40.0%
! ATTCCTTTGAAGGAAAACCG+AGG + chr2_2:37014093-37014112 Msa0249670:CDS 40.0%
AATGAAACCAAGAAAGCCTC+AGG + chr2_2:37014241-37014260 Msa0249670:CDS 40.0%
ATGAAACCAAGAAAGCCTCA+GGG + chr2_2:37014242-37014261 Msa0249670:CDS 40.0%
! TGTTTCTAACCAAAACCCTG+AGG - chr2_2:37014260-37014279 None:intergenic 40.0%
! GTACCTATTTTCTTGTGCAG+GGG + chr2_2:37014359-37014378 Msa0249670:intron 40.0%
TTGAGAATTTCAGAAGAGGG+TGG + chr2_2:37014549-37014568 Msa0249670:three_prime_UTR 40.0%
GGAGTGTGTTAGAACTTAGA+AGG - chr2_2:37014737-37014756 None:intergenic 40.0%
ATGAGCCACATTGCTCTCAA+TGG - chr2_2:37006689-37006708 None:intergenic 45.0%
GTGTGCAACATTGTTGCTAC+GGG - chr2_2:37006715-37006734 None:intergenic 45.0%
GGTGTGCAACATTGTTGCTA+CGG - chr2_2:37006716-37006735 None:intergenic 45.0%
AAGAGTTCTTGAGGGGATGT+AGG - chr2_2:37006752-37006771 None:intergenic 45.0%
GAGGAAGAAGAGTTCTTGAG+GGG - chr2_2:37006759-37006778 None:intergenic 45.0%
! TGGTGTTGGAGAAGTAGACA+TGG - chr2_2:37006820-37006839 None:intergenic 45.0%
ATTGGCATGTCTGCTGAAGT+TGG - chr2_2:37006872-37006891 None:intergenic 45.0%
GAAAAAAGAGGGAGGGAGTA+GGG - chr2_2:37007130-37007149 None:intergenic 45.0%
TGAAAAAAGAGGGAGGGAGT+AGG - chr2_2:37007131-37007150 None:intergenic 45.0%
TTATAAGTGAGGGCAGACCT+CGG - chr2_2:37007177-37007196 None:intergenic 45.0%
!! TGGTTTAGTTCTTGCCCGAT+TGG + chr2_2:37007351-37007370 Msa0249670:intron 45.0%
ATGGTTAAGCTCTGCCAATC+GGG - chr2_2:37007368-37007387 None:intergenic 45.0%
ACACACTCTCATGTAAGGTC+AGG + chr2_2:37007414-37007433 Msa0249670:intron 45.0%
CACACTCTCATGTAAGGTCA+GGG + chr2_2:37007415-37007434 Msa0249670:intron 45.0%
CAAATCCTCAATGAGGTTGG+TGG - chr2_2:37007445-37007464 None:intergenic 45.0%
CGTCAAATCCTCAATGAGGT+TGG - chr2_2:37007448-37007467 None:intergenic 45.0%
ACTAGAACCCAAGTCACAAC+TGG + chr2_2:37007495-37007514 Msa0249670:intron 45.0%
CACTTACACCAGTTGTGACT+TGG - chr2_2:37007506-37007525 None:intergenic 45.0%
CAAGTCACAACTGGTGTAAG+TGG + chr2_2:37007504-37007523 Msa0249670:intron 45.0%
TCACAACTGGTGTAAGTGGA+AGG + chr2_2:37007508-37007527 Msa0249670:intron 45.0%
!! TATAGTGTTGGCAGGCAATG+AGG - chr2_2:37007626-37007645 None:intergenic 45.0%
! GGTAGTGTTTGCCTTTTGGT+AGG + chr2_2:37007726-37007745 Msa0249670:intron 45.0%
CCGTGGAACTGATACCAATA+TGG + chr2_2:37007853-37007872 Msa0249670:intron 45.0%
GGAACTGATACCAATATGGG+AGG + chr2_2:37007857-37007876 Msa0249670:intron 45.0%
ACCAATATGGGAGGCTGTTT+AGG + chr2_2:37007866-37007885 Msa0249670:intron 45.0%
CTATGGAAGGCTACTAGACA+AGG - chr2_2:37007903-37007922 None:intergenic 45.0%
ACTACTAGACAAGGCGACTA+TGG - chr2_2:37007920-37007939 None:intergenic 45.0%
CTGCATGTTCCAACCTGTAT+CGG + chr2_2:37008007-37008026 Msa0249670:intron 45.0%
CCGCAGCTTATTCTATACAC+TGG - chr2_2:37008058-37008077 None:intergenic 45.0%
CAGACACAACGCATATGATC+AGG - chr2_2:37008987-37009006 None:intergenic 45.0%
TTGTGTCTGTTTCCGCAGTA+TGG + chr2_2:37008998-37009017 Msa0249670:intron 45.0%
TAAGAGCAGAAGTAGCAGCT+GGG + chr2_2:37009050-37009069 Msa0249670:CDS 45.0%
CAAAAAGGGTGGCTTCTTGA+CGG + chr2_2:37009287-37009306 Msa0249670:CDS 45.0%
CAGCTTGGGATAAACTACGA+GGG - chr2_2:37009316-37009335 None:intergenic 45.0%
TCAGCTTGGGATAAACTACG+AGG - chr2_2:37009317-37009336 None:intergenic 45.0%
! TCGACAGATGTGTTGGTAGA+AGG + chr2_2:37009907-37009926 Msa0249670:CDS 45.0%
TTGATTTCTTCTGTCTCCGG+CGG - chr2_2:37009975-37009994 None:intergenic 45.0%
TTCTTCAGTGTCATCAGGAC+GGG - chr2_2:37010012-37010031 None:intergenic 45.0%
!! GGGGATTGGTTCTAAAGGAA+TGG + chr2_2:37010311-37010330 Msa0249670:intron 45.0%
AGGGTCATGTCATGACATTG+CGG - chr2_2:37010378-37010397 None:intergenic 45.0%
TAATAGTGGCAATGTCCCAC+TGG - chr2_2:37010668-37010687 None:intergenic 45.0%
! TGGTCTTGATTGACATGGTG+GGG + chr2_2:37011063-37011082 Msa0249670:intron 45.0%
GCATCTTTGATCCAGGTAGA+CGG + chr2_2:37011193-37011212 Msa0249670:intron 45.0%
ACTAAGTACTACCGTCTACC+TGG - chr2_2:37011207-37011226 None:intergenic 45.0%
TTCCCCATTCTCGAGAAATG+AGG + chr2_2:37011364-37011383 Msa0249670:CDS 45.0%
! ATGTGCTACTAGCTACACAG+AGG + chr2_2:37011403-37011422 Msa0249670:CDS 45.0%
! TGTGCTACTAGCTACACAGA+GGG + chr2_2:37011404-37011423 Msa0249670:CDS 45.0%
ATCATCAGAATAGGCCTCAG+GGG - chr2_2:37011842-37011861 None:intergenic 45.0%
GTTTGTGTACAGGGGTCAAT+GGG + chr2_2:37012205-37012224 Msa0249670:CDS 45.0%
TGGGGTGATTATGGTGCAAA+AGG + chr2_2:37012295-37012314 Msa0249670:CDS 45.0%
CTGCAACAGCAGAACCATAA+AGG - chr2_2:37012366-37012385 None:intergenic 45.0%
TTGAAGCAGCTACGTAGAAG+TGG - chr2_2:37012511-37012530 None:intergenic 45.0%
TGGCTCCTCAAAATGCTGTA+GGG + chr2_2:37012910-37012929 Msa0249670:CDS 45.0%
CACTAGAAGCAGGTAAATCC+TGG - chr2_2:37013543-37013562 None:intergenic 45.0%
CAGGATTTACCTGCTTCTAG+TGG + chr2_2:37013541-37013560 Msa0249670:intron 45.0%
AGGAACCCAGTATCCCATAA+TGG + chr2_2:37013733-37013752 Msa0249670:intron 45.0%
GGAACCCAGTATCCCATAAT+GGG + chr2_2:37013734-37013753 Msa0249670:intron 45.0%
AGCTCCCATTATGGGATACT+GGG - chr2_2:37013741-37013760 None:intergenic 45.0%
TACCTGAGAGCTCCCATTAT+GGG - chr2_2:37013749-37013768 None:intergenic 45.0%
TTACCTGAGAGCTCCCATTA+TGG - chr2_2:37013750-37013769 None:intergenic 45.0%
TTGTACAGCTCGTAACGGTA+TGG - chr2_2:37013990-37014009 None:intergenic 45.0%
CAAAAGAGTAGAAGAGTCGC+CGG + chr2_2:37014007-37014026 Msa0249670:CDS 45.0%
AAAAGAGTAGAAGAGTCGCC+GGG + chr2_2:37014008-37014027 Msa0249670:CDS 45.0%
! GTACCTCGGTTTTCCTTCAA+AGG - chr2_2:37014099-37014118 None:intergenic 45.0%
TCGGAGTTTGTAGTGCAACT+TGG + chr2_2:37014479-37014498 Msa0249670:three_prime_UTR 45.0%
CGGAGTTTGTAGTGCAACTT+GGG + chr2_2:37014480-37014499 Msa0249670:three_prime_UTR 45.0%
GGAGTTTGTAGTGCAACTTG+GGG + chr2_2:37014481-37014500 Msa0249670:three_prime_UTR 45.0%
AGTTCTTGAGGGGATGTAGG+AGG - chr2_2:37006749-37006768 None:intergenic 50.0%
ATATCAGGTGCACCTGCATC+TGG + chr2_2:37007056-37007075 Msa0249670:CDS 50.0%
ATACTCGGTACAATGAGCCG+AGG + chr2_2:37007157-37007176 Msa0249670:intron 50.0%
CGCATAGTGTGGGAGAGAAA+AGG + chr2_2:37007304-37007323 Msa0249670:intron 50.0%
GAGAACCACCAACCTCATTG+AGG + chr2_2:37007437-37007456 Msa0249670:intron 50.0%
GCCTAAACAGCCTCCCATAT+TGG - chr2_2:37007870-37007889 None:intergenic 50.0%
CTAGACAAGGCGACTATGGA+AGG - chr2_2:37007916-37007935 None:intergenic 50.0%
TCAACACAGCCGATACAGGT+TGG - chr2_2:37008019-37008038 None:intergenic 50.0%
AGAATAAGCTGCGGCCATGA+AGG + chr2_2:37008064-37008083 Msa0249670:intron 50.0%
! GAGACTAGTCCCTACCTTCA+TGG - chr2_2:37008081-37008100 None:intergenic 50.0%
CTCTGTTCAAGGTGATGTGC+AGG - chr2_2:37008534-37008553 None:intergenic 50.0%
CTAAGAGCAGAAGTAGCAGC+TGG + chr2_2:37009049-37009068 Msa0249670:CDS 50.0%
GTAGCAGCTGGGACAGAAAT+AGG + chr2_2:37009061-37009080 Msa0249670:CDS 50.0%
GTTCATGAATGCTGGTCGCT+TGG + chr2_2:37009099-37009118 Msa0249670:CDS 50.0%
GGGTCATGTCATGACATTGC+GGG - chr2_2:37010377-37010396 None:intergenic 50.0%
!! GCTTGCCCCTTTTTCATACC+AGG - chr2_2:37011175-37011194 None:intergenic 50.0%
ACACAGAGGGCCATCAATGA+TGG + chr2_2:37011417-37011436 Msa0249670:CDS 50.0%
TGTCCTGCAGGTTTGTGTAC+AGG + chr2_2:37012195-37012214 Msa0249670:intron 50.0%
GTCCTGCAGGTTTGTGTACA+GGG + chr2_2:37012196-37012215 Msa0249670:intron 50.0%
TCCTGCAGGTTTGTGTACAG+GGG + chr2_2:37012197-37012216 Msa0249670:intron 50.0%
GGTTTGTGTACAGGGGTCAA+TGG + chr2_2:37012204-37012223 Msa0249670:intron 50.0%
GGAATGCCATTACAGCTTGC+TGG + chr2_2:37012244-37012263 Msa0249670:CDS 50.0%
CGACTTCCAGCAAGCTGTAA+TGG - chr2_2:37012253-37012272 None:intergenic 50.0%
GTGGCTCCTCAAAATGCTGT+AGG + chr2_2:37012909-37012928 Msa0249670:CDS 50.0%
AGCAGGCATCATGATCTGCA+TGG + chr2_2:37013309-37013328 Msa0249670:intron 50.0%
GAGCTCCCATTATGGGATAC+TGG - chr2_2:37013742-37013761 None:intergenic 50.0%
! ATCCCATAATGGGAGCTCTC+AGG + chr2_2:37013744-37013763 Msa0249670:intron 50.0%
ATGGGAGCTCTCAGGTAAGA+TGG + chr2_2:37013752-37013771 Msa0249670:intron 50.0%
CAGCTCGTAACGGTATGGAT+AGG - chr2_2:37013985-37014004 None:intergenic 50.0%
CCAAAACCCTGAGGCTTTCT+TGG - chr2_2:37014251-37014270 None:intergenic 50.0%
! CCAAGAAAGCCTCAGGGTTT+TGG + chr2_2:37014248-37014267 Msa0249670:CDS 50.0%
GAGCCCCTGCACAAGAAAAT+AGG - chr2_2:37014365-37014384 None:intergenic 50.0%
GTTTGTAGTGCAACTTGGGG+TGG + chr2_2:37014484-37014503 Msa0249670:three_prime_UTR 50.0%
GATGTAGGAGGAAGAGGGTG+TGG - chr2_2:37006737-37006756 None:intergenic 55.0%
GAGGGGATGTAGGAGGAAGA+GGG - chr2_2:37006742-37006761 None:intergenic 55.0%
TGAGGGGATGTAGGAGGAAG+AGG - chr2_2:37006743-37006762 None:intergenic 55.0%
CTCCACAAGCGAGCCATTGA+AGG + chr2_2:37007028-37007047 Msa0249670:CDS 55.0%
CACCTTCAATGGCTCGCTTG+TGG - chr2_2:37007033-37007052 None:intergenic 55.0%
TGAGTTCCCTTGCCAGATGC+AGG - chr2_2:37007071-37007090 None:intergenic 55.0%
TGTGGGAGAGAAAAGGCCTC+TGG + chr2_2:37007311-37007330 Msa0249670:intron 55.0%
TTGGCAGGCAATGAGGCTTG+TGG - chr2_2:37007619-37007638 None:intergenic 55.0%
TAAGCTGCGGCCATGAAGGT+AGG + chr2_2:37008068-37008087 Msa0249670:intron 55.0%
AAGCTGCGGCCATGAAGGTA+GGG + chr2_2:37008069-37008088 Msa0249670:intron 55.0%
CGTGCTGCCACCATCTACAA+GGG - chr2_2:37009245-37009264 None:intergenic 55.0%
TCGTGCTGCCACCATCTACA+AGG - chr2_2:37009246-37009265 None:intergenic 55.0%
GGGGCAAGCATCTTTGATCC+AGG + chr2_2:37011186-37011205 Msa0249670:CDS 55.0%
ACCCCTGTACACAAACCTGC+AGG - chr2_2:37012201-37012220 None:intergenic 55.0%
GTACAGGGGTCAATGGGAGA+AGG + chr2_2:37012211-37012230 Msa0249670:CDS 55.0%
!! ATGGGAGAAGGTGCTCTTGC+TGG + chr2_2:37012223-37012242 Msa0249670:CDS 55.0%
TCTAATCTCAGGTGCAGCGG+AGG + chr2_2:37012857-37012876 Msa0249670:intron 55.0%
CTCATAACCGAGGACTGAGC+AGG + chr2_2:37013292-37013311 Msa0249670:intron 55.0%
CATGATGCCTGCTCAGTCCT+CGG - chr2_2:37013302-37013321 None:intergenic 55.0%
GCGCGAGAAACTCATAGGGT+GGG - chr2_2:37013818-37013837 None:intergenic 55.0%
AGTTTCTCGCGCGCCCTATT+CGG + chr2_2:37013826-37013845 Msa0249670:intron 55.0%
AGGCGCGTGAGAACCTCATA+GGG + chr2_2:37013882-37013901 Msa0249670:intron 55.0%
GGTAGGCCTTTCAGGAAAGG+TGG - chr2_2:37014057-37014076 None:intergenic 55.0%
CACGGTAGGCCTTTCAGGAA+AGG - chr2_2:37014060-37014079 None:intergenic 55.0%
CTTTCCTGAAAGGCCTACCG+TGG + chr2_2:37014058-37014077 Msa0249670:CDS 55.0%
TCATCCACGGTAGGCCTTTC+AGG - chr2_2:37014065-37014084 None:intergenic 55.0%
AGGTGCACCTGCATCTGGCA+AGG + chr2_2:37007061-37007080 Msa0249670:CDS 60.0%
GGTGCACCTGCATCTGGCAA+GGG + chr2_2:37007062-37007081 Msa0249670:CDS 60.0%
TGGTCTGTGTTCGGCAGCAG+TGG - chr2_2:37013125-37013144 None:intergenic 60.0%
CGCGCGAGAAACTCATAGGG+TGG - chr2_2:37013819-37013838 None:intergenic 60.0%
GGGCGCGCGAGAAACTCATA+GGG - chr2_2:37013822-37013841 None:intergenic 60.0%
AGGGCGCGCGAGAAACTCAT+AGG - chr2_2:37013823-37013842 None:intergenic 60.0%
CAGGCGCGTGAGAACCTCAT+AGG + chr2_2:37013881-37013900 Msa0249670:intron 60.0%
CGCGTGAGAACCTCATAGGG+TGG + chr2_2:37013885-37013904 Msa0249670:intron 60.0%
TTGTGCAGGGGCTCGTTGAG+TGG + chr2_2:37014371-37014390 Msa0249670:intron 60.0%
Chromosome Type Strat End Strand Name
chr2_2 gene 37006644 37014762 37006644 ID=Msa0249670;Name=Msa0249670
chr2_2 mRNA 37006644 37014762 37006644 ID=Msa0249670-mRNA-1;Parent=Msa0249670;Name=Msa0249670-mRNA-1;_AED=0.11;_eAED=0.11;_QI=80|0.94|0.94|1|1|1|18|356|608
chr2_2 exon 37006644 37006909 37006644 ID=Msa0249670-mRNA-1:exon:11733;Parent=Msa0249670-mRNA-1
chr2_2 exon 37007005 37007112 37007005 ID=Msa0249670-mRNA-1:exon:11734;Parent=Msa0249670-mRNA-1
chr2_2 exon 37009016 37009144 37009016 ID=Msa0249670-mRNA-1:exon:11735;Parent=Msa0249670-mRNA-1
chr2_2 exon 37009251 37009385 37009251 ID=Msa0249670-mRNA-1:exon:11736;Parent=Msa0249670-mRNA-1
chr2_2 exon 37009888 37010034 37009888 ID=Msa0249670-mRNA-1:exon:11737;Parent=Msa0249670-mRNA-1
chr2_2 exon 37010544 37010805 37010544 ID=Msa0249670-mRNA-1:exon:11738;Parent=Msa0249670-mRNA-1
chr2_2 exon 37011161 37011207 37011161 ID=Msa0249670-mRNA-1:exon:11739;Parent=Msa0249670-mRNA-1
chr2_2 exon 37011327 37011455 37011327 ID=Msa0249670-mRNA-1:exon:11740;Parent=Msa0249670-mRNA-1
chr2_2 exon 37011894 37011929 37011894 ID=Msa0249670-mRNA-1:exon:11741;Parent=Msa0249670-mRNA-1
chr2_2 exon 37012001 37012081 37012001 ID=Msa0249670-mRNA-1:exon:11742;Parent=Msa0249670-mRNA-1
chr2_2 exon 37012205 37012343 37012205 ID=Msa0249670-mRNA-1:exon:11743;Parent=Msa0249670-mRNA-1
chr2_2 exon 37012868 37012947 37012868 ID=Msa0249670-mRNA-1:exon:11744;Parent=Msa0249670-mRNA-1
chr2_2 exon 37013106 37013171 37013106 ID=Msa0249670-mRNA-1:exon:11745;Parent=Msa0249670-mRNA-1
chr2_2 exon 37013544 37013573 37013544 ID=Msa0249670-mRNA-1:exon:11746;Parent=Msa0249670-mRNA-1
chr2_2 exon 37013656 37013711 37013656 ID=Msa0249670-mRNA-1:exon:11747;Parent=Msa0249670-mRNA-1
chr2_2 exon 37013977 37014114 37013977 ID=Msa0249670-mRNA-1:exon:11748;Parent=Msa0249670-mRNA-1
chr2_2 exon 37014240 37014269 37014240 ID=Msa0249670-mRNA-1:exon:11749;Parent=Msa0249670-mRNA-1
chr2_2 exon 37014379 37014762 37014379 ID=Msa0249670-mRNA-1:exon:11750;Parent=Msa0249670-mRNA-1
chr2_2 five_prime_UTR 37006644 37006723 37006644 ID=Msa0249670-mRNA-1:five_prime_utr;Parent=Msa0249670-mRNA-1
chr2_2 CDS 37006724 37006909 37006724 ID=Msa0249670-mRNA-1:cds;Parent=Msa0249670-mRNA-1
chr2_2 CDS 37007005 37007112 37007005 ID=Msa0249670-mRNA-1:cds;Parent=Msa0249670-mRNA-1
chr2_2 CDS 37009016 37009144 37009016 ID=Msa0249670-mRNA-1:cds;Parent=Msa0249670-mRNA-1
chr2_2 CDS 37009251 37009385 37009251 ID=Msa0249670-mRNA-1:cds;Parent=Msa0249670-mRNA-1
chr2_2 CDS 37009888 37010034 37009888 ID=Msa0249670-mRNA-1:cds;Parent=Msa0249670-mRNA-1
chr2_2 CDS 37010544 37010805 37010544 ID=Msa0249670-mRNA-1:cds;Parent=Msa0249670-mRNA-1
chr2_2 CDS 37011161 37011207 37011161 ID=Msa0249670-mRNA-1:cds;Parent=Msa0249670-mRNA-1
chr2_2 CDS 37011327 37011455 37011327 ID=Msa0249670-mRNA-1:cds;Parent=Msa0249670-mRNA-1
chr2_2 CDS 37011894 37011929 37011894 ID=Msa0249670-mRNA-1:cds;Parent=Msa0249670-mRNA-1
chr2_2 CDS 37012001 37012081 37012001 ID=Msa0249670-mRNA-1:cds;Parent=Msa0249670-mRNA-1
chr2_2 CDS 37012205 37012343 37012205 ID=Msa0249670-mRNA-1:cds;Parent=Msa0249670-mRNA-1
chr2_2 CDS 37012868 37012947 37012868 ID=Msa0249670-mRNA-1:cds;Parent=Msa0249670-mRNA-1
chr2_2 CDS 37013106 37013171 37013106 ID=Msa0249670-mRNA-1:cds;Parent=Msa0249670-mRNA-1
chr2_2 CDS 37013544 37013573 37013544 ID=Msa0249670-mRNA-1:cds;Parent=Msa0249670-mRNA-1
chr2_2 CDS 37013656 37013711 37013656 ID=Msa0249670-mRNA-1:cds;Parent=Msa0249670-mRNA-1
chr2_2 CDS 37013977 37014114 37013977 ID=Msa0249670-mRNA-1:cds;Parent=Msa0249670-mRNA-1
chr2_2 CDS 37014240 37014269 37014240 ID=Msa0249670-mRNA-1:cds;Parent=Msa0249670-mRNA-1
chr2_2 CDS 37014379 37014406 37014379 ID=Msa0249670-mRNA-1:cds;Parent=Msa0249670-mRNA-1
chr2_2 three_prime_UTR 37014407 37014762 37014407 ID=Msa0249670-mRNA-1:three_prime_utr;Parent=Msa0249670-mRNA-1
Gene Sequence

>Msa0249670

ATGTTGCACACCACACCCTCTTCCTCCTACATCCCCTCAAGAACTCTTCTTCCTCATTCTCTTTTATTTTCTTCTTCTATTTCTTCTCATCAGCCATGTCTACTTCTCCAACACCACAACTTTAACACTCAATATCTTCACTTAACCAACTTCAGCAGACATGCCAATTTGCCATTAAGACCCAAGGCAACAAGAAAGGTGATAAATTGCTCCACAAGCGAGCCATTGAAGGTGATGATATCAGGTGCACCTGCATCTGGCAAGGGAACTCAATGTGAATTGATTGTTAATAAGTATGGATTAGTGCACATATCAACTGGGGACTTGCTAAGAGCAGAAGTAGCAGCTGGGACAGAAATAGGAAACAAAGCAAAAGAGTTCATGAATGCTGGTCGCTTGGTTCCTGATGAAATTGTGACAGCTATGGTGGCAGCACGATTGTCTTGCAAAGATGTTAAGCAAAAAGGGTGGCTTCTTGACGGTTACCCTCGTAGTTTATCCCAAGCTGAAAGTCTAGAGAAAATGCAGATACGACCTGATGTGTATATCGTATTAGATGTTCATGATGAAATTCTGATCGACAGATGTGTTGGTAGAAGGTTAGATCCAGTAACTGGCAAGATCTATCATGAGAAATTTTTTCCGCCGGAGACAGAAGAAATCAAAGCAAGGCTAGTAACCCGTCCTGATGACACTGAAGAAAAAGTTATGTCACGCCTAAACATCTATAAGCAAAATGCAGAATCAGTATCTTCCTCTTACTCAAACATAACAAAGAAGGTTACTGAAGATTATTCTCTTTTCTGTGCCATGACAATAATGTCAACCAGTGGGACATTGCCACTATTAACTTATTTGGCATATTTACAGATTGATGGAAGCCGTCCAAAAGAAGAAGTTTTCAAAGATATTGAATCTTTATTATCTCAATTGCAACAAGATAGAGTGAAAATAGTGAAATCTGGAGAAAAACCGATTCCTGGTATGAAAAAGGGGCAAGCATCTTTGATCCAGGATAAATGGAGAGGAATACCTACTAGACTAAATAACATTCCCCATTCTCGAGAAATGAGGAAATATTTCTATGATGATGTGCTACTAGCTACACAGAGGGCCATCAATGATGGAAAAACTAGGTTAAAGGTTGACATCAACATTCCTGAATTGAATCCAGAAATGGATGTTTATCGAATTGGTACACTGTTGGAACTTATTCGATCTCTTGCACTTTCATTTGCCAATGATGGAAAACGTGTAAAGGTTTGTGTACAGGGGTCAATGGGAGAAGGTGCTCTTGCTGGAATGCCATTACAGCTTGCTGGAAGTCGAAAGATTTTAGAATTCATGGATTGGGGTGATTATGGTGCAAAAGGAACCTTCATCAACATTGGTTCCATAGGTGCAGCGGAGGTTGAAGAGCAAGATGACATGTATTTCTTGGTGGCTCCTCAAAATGCTGTAGGGAATTGTATTATTGATGATTTAAAGGCAATGACCACTGCTGCCGAACACAGACCAGTTATCCTAATCAATGCTAAGCTTAAGGATTTACCTGCTTCTAGTGGTATTATGCAAACAATGGGGCGAGACAAAAGACTCGAGTATTCAGCATCATTTGAAAGTTGCTACTTGATGTCCTATCCATACCGTTACGAGCTGTACAAAAGAGTAGAAGAGTCGCCGGGAAAAGAGAAGTATGTACTTTTGTCCACCTTTCCTGAAAGGCCTACCGTGGATGAAATTAATGATTCCTTTGAAGGAAAACCGAGAAATGAAACCAAGAAAGCCTCAGGGTTTTGGGGCTCGTTGAGTGGCATGTTTTTTTGA

Protein sequence

>Msa0249670

MLHTTPSSSYIPSRTLLPHSLLFSSSISSHQPCLLLQHHNFNTQYLHLTNFSRHANLPLRPKATRKVINCSTSEPLKVMISGAPASGKGTQCELIVNKYGLVHISTGDLLRAEVAAGTEIGNKAKEFMNAGRLVPDEIVTAMVAARLSCKDVKQKGWLLDGYPRSLSQAESLEKMQIRPDVYIVLDVHDEILIDRCVGRRLDPVTGKIYHEKFFPPETEEIKARLVTRPDDTEEKVMSRLNIYKQNAESVSSSYSNITKKVTEDYSLFCAMTIMSTSGTLPLLTYLAYLQIDGSRPKEEVFKDIESLLSQLQQDRVKIVKSGEKPIPGMKKGQASLIQDKWRGIPTRLNNIPHSREMRKYFYDDVLLATQRAINDGKTRLKVDINIPELNPEMDVYRIGTLLELIRSLALSFANDGKRVKVCVQGSMGEGALAGMPLQLAGSRKILEFMDWGDYGAKGTFINIGSIGAAEVEEQDDMYFLVAPQNAVGNCIIDDLKAMTTAAEHRPVILINAKLKDLPASSGIMQTMGRDKRLEYSASFESCYLMSYPYRYELYKRVEESPGKEKYVLLSTFPERPTVDEINDSFEGKPRNETKKASGFWGSLSGMFF*