AlfalfaGEDB Alfalfa Gene Editing Database

M. sativa cultivar zhongmu-4 / Msa0558850


Query id Subject id identity % alignment length mismatches gap openings q. start q. end s. start s. end e-value bit score
Msa0558850 MtrunA17_Chr8g0378671 91.714 531 44 0 4 534 1 531 0.0 1027
Msa0558850 MtrunA17_Chr8g0378721 88.805 527 56 2 4 528 1 526 0.0 984
Msa0558850 MtrunA17_Chr8g0378701 88.083 386 43 2 1 384 12 396 0.0 716
Msa0558850 MtrunA17_Chr8g0378691 86.207 145 20 0 384 528 9 153 6.67e-87 268
Msa0558850 MtrunA17_Chr4g0027961 34.461 473 265 14 81 527 89 542 4.39e-82 268
Msa0558850 MtrunA17_Chr3g0136771 27.426 474 267 13 44 467 46 492 4.44e-46 171
Query id Subject id identity % alignment length mismatches gap openings q. start q. end s. start s. end e-value bit score
Msa0558850 AT4G25650.1 58.672 542 201 9 1 528 1 533 0.0 654
Msa0558850 AT4G25650.2 56.560 564 201 10 1 528 1 556 0.0 646
Msa0558850 AT3G44880.1 34.601 526 274 19 46 530 39 535 2.32e-84 274
Msa0558850 AT2G24820.1 27.875 513 283 16 4 467 5 479 4.08e-48 177
Msa0558850 AT1G44446.4 21.898 411 231 20 58 433 79 434 1.32e-12 70.5
Msa0558850 AT1G44446.1 22.384 411 229 21 58 433 181 536 2.28e-12 70.1
Msa0558850 AT1G44446.3 25.225 222 113 9 58 256 181 372 3.51e-11 66.2
Msa0558850 AT1G44446.2 25.225 222 113 9 58 256 181 372 7.00e-11 65.5

Find 132 sgRNAs with CRISPR-Local

Find 238 sgRNAs with CRISPR-GE


CRISPR-Local

CRISPR-Local
sgRNA_sequence on_target_score Position Region
TGAAACTTGGGAACAATTAT+TGG 0.180310 4_1:-57855398 None:intergenic
TCTGAACCTGTTTCAACTTC+TGG 0.199220 4_1:-57855716 None:intergenic
TCCATCATTTGCTAGCTTAA+TGG 0.218538 4_1:+57856472 Msa0558850:CDS
TTGAATCGAGGATCAGTATT+TGG 0.226374 4_1:-57856401 None:intergenic
ACAATTGTTAATTCATATAT+TGG 0.227253 4_1:+57859005 Msa0558850:CDS
TGGTGCTTTCCGAGAAATTT+TGG 0.234178 4_1:+57857451 Msa0558850:CDS
CCATCATTTGCTAGCTTAAT+GGG 0.262213 4_1:+57856473 Msa0558850:CDS
AGAATAATATCTTGTGGTTT+TGG 0.262792 4_1:+57856378 Msa0558850:CDS
CAATGGTTTCACTGCAAATC+TGG 0.263398 4_1:+57857193 Msa0558850:CDS
CACCACATTGAGGCTCTTAT+AGG 0.282231 4_1:-57858498 None:intergenic
ATCATATCAGTTGCTTCAAT+TGG 0.287082 4_1:+57858536 Msa0558850:CDS
AATGATGGATCATCAATTTC+TGG 0.296431 4_1:-57856458 None:intergenic
TGGATGCTGGTCAAGAAAAT+TGG 0.301039 4_1:+57857801 Msa0558850:CDS
TCAATCCTTCCTTCAGATAA+AGG 0.315750 4_1:-57855905 None:intergenic
GGAAACAGAGATATTCCTTA+TGG 0.335690 4_1:+57856494 Msa0558850:CDS
TGGGAATTGATGTTGTTATA+TGG 0.344667 4_1:+57855822 Msa0558850:CDS
GAAGTGTTCCCACGGATTAA+TGG 0.348211 4_1:-57855614 None:intergenic
CTACTACTAGAATCTGTTAA+TGG 0.354981 4_1:-57855671 None:intergenic
AACTTCGTTTCCCTAGGAAT+TGG 0.355059 4_1:-57855361 None:intergenic
GTGAAACCTGTGAAGGTTCT+TGG 0.363259 4_1:+57858966 Msa0558850:CDS
ACCTCCTAGAGAACAGCTTA+TGG 0.373079 4_1:+57857949 Msa0558850:CDS
TGCCTTTGTTGGCACAAAAC+AGG 0.379469 4_1:-57857831 None:intergenic
ACAGAAGATGCAAGTTCATC+TGG 0.381857 4_1:-57857269 None:intergenic
AAGGCAGATGCTCTTGTGAT+TGG 0.399532 4_1:+57857848 Msa0558850:CDS
CTGGTTCATCATCCACTTCA+AGG 0.399812 4_1:-57855697 None:intergenic
TGCATCTTCTGTTGAAACTA+AGG 0.404424 4_1:+57857280 Msa0558850:CDS
TGTTTAGCACTCCAATTCCT+AGG 0.411435 4_1:+57855350 Msa0558850:five_prime_UTR
GTTAATCCATAGTGTGCATA+TGG 0.414358 4_1:-57857024 None:intergenic
TGAAGGAAGGATTGATCAAT+GGG 0.415631 4_1:+57855913 Msa0558850:CDS
CCCATTAAGCTAGCAAATGA+TGG 0.416361 4_1:-57856473 None:intergenic
ACAAGAGCATCTGCCTTTGT+TGG 0.416937 4_1:-57857842 None:intergenic
ATATTATTCTGCACAATGCT+TGG 0.417838 4_1:-57856365 None:intergenic
ATTGAAGAGTTAGATATCAA+TGG 0.427054 4_1:+57857176 Msa0558850:CDS
CATCAATTTCTGGTATGAAT+GGG 0.432152 4_1:-57856448 None:intergenic
TCATCAATTTCTGGTATGAA+TGG 0.435029 4_1:-57856449 None:intergenic
CTGGTAATAGTAGACTGATT+TGG 0.436210 4_1:+57857431 Msa0558850:CDS
ACCCACAGTCCAAAATTTCT+CGG 0.439221 4_1:-57857460 None:intergenic
AAGAAATTCTATAGTTGTGC+TGG 0.439574 4_1:+57858601 Msa0558850:CDS
CATGTTCCATATGCACACTA+TGG 0.450961 4_1:+57857018 Msa0558850:CDS
GATTGGAGAGGAAAATATAG+TGG 0.451279 4_1:+57857911 Msa0558850:CDS
ATTTGTATTCCTGTGAGTCC+TGG 0.453411 4_1:+57857412 Msa0558850:CDS
GATGAACCAGAAGTTGAAAC+AGG 0.463226 4_1:+57855710 Msa0558850:CDS
ATTTAAGAGAAGTTGAAACT+TGG 0.464459 4_1:-57855411 None:intergenic
TCATATCAGTTGCTTCAATT+GGG 0.473164 4_1:+57858537 Msa0558850:CDS
CTGAAGGAAGGATTGATCAA+TGG 0.475748 4_1:+57855912 Msa0558850:CDS
GAAACAGAGATATTCCTTAT+GGG 0.476962 4_1:+57856495 Msa0558850:CDS
GATTGTTGCCGCAATAAAGC+AGG 0.480412 4_1:+57858559 Msa0558850:CDS
ATGCAGGTGATCAAGTTGAT+TGG 0.490731 4_1:+57857894 Msa0558850:CDS
AACGAAGTTCGGTCAGGAGC+TGG 0.491198 4_1:+57855375 Msa0558850:five_prime_UTR
CATAGAAAATTTCTTTCGAA+CGG 0.491844 4_1:-57857383 None:intergenic
TGATTGCAAGTTCATTCCTC+AGG 0.492594 4_1:+57855982 Msa0558850:CDS
AATAATGCTGATAGAGAAGG+AGG 0.493895 4_1:+57857134 Msa0558850:CDS
AATGGTTTCACTGCAAATCT+GGG 0.503553 4_1:+57857194 Msa0558850:CDS
TTTAAGAGAAGTTGAAACTT+GGG 0.510025 4_1:-57855410 None:intergenic
ATTTCTCCAAGAACCTTCAC+AGG 0.510553 4_1:-57858972 None:intergenic
GTTTCACTGCAAATCTGGGT+TGG 0.513366 4_1:+57857198 Msa0558850:CDS
ACCTCGATGGATTCTTCATG+TGG 0.513689 4_1:+57857495 Msa0558850:CDS
GGCACCTCGTGAAGGACCTC+CGG 0.516187 4_1:+57856003 Msa0558850:CDS
ATTGGAGAGGAAAATATAGT+GGG 0.516950 4_1:+57857912 Msa0558850:CDS
AAATTAAAATCATACCCATA+AGG 0.517619 4_1:-57856509 None:intergenic
GATAAAGGTGCTAATCTATG+AGG 0.517916 4_1:-57855890 None:intergenic
AGGTTGCAGTGTGTGTATCA+TGG 0.520375 4_1:+57855938 Msa0558850:CDS
AACTCTTGCAATTCACCGTA+TGG 0.523296 4_1:-57858466 None:intergenic
AAATGGTTAAAGAAGTATGC+AGG 0.524010 4_1:+57857878 Msa0558850:CDS
ATTCCTAGGGAAACGAAGTT+CGG 0.526687 4_1:+57855364 Msa0558850:five_prime_UTR
CTAGAATCTGTTAATGGAGA+AGG 0.526969 4_1:-57855665 None:intergenic
TAGGGAAACGAAGTTCGGTC+AGG 0.527930 4_1:+57855369 Msa0558850:five_prime_UTR
AGATCACATATTGGCATCAA+AGG 0.530584 4_1:-57855767 None:intergenic
TTTATATCTTCTCCATGTTG+AGG 0.531042 4_1:+57857543 Msa0558850:CDS
CTGTCCATAAGCTGTTCTCT+AGG 0.535255 4_1:-57857953 None:intergenic
TAGCACCTTTATCTGAAGGA+AGG 0.536409 4_1:+57855900 Msa0558850:CDS
TGGTCAAGAAAATTGGCATA+AGG 0.536911 4_1:+57857808 Msa0558850:CDS
CCCATCACTTTCTTAGCATG+AGG 0.538954 4_1:-57855803 None:intergenic
TGCCGCAATAAAGCAGGGAA+TGG 0.543982 4_1:+57858565 Msa0558850:CDS
AGATTAGCACCTTTATCTGA+AGG 0.544881 4_1:+57855896 Msa0558850:CDS
CAAATCAGTCTACTATTACC+AGG 0.545513 4_1:-57857430 None:intergenic
GTTTAGCACTCCAATTCCTA+GGG 0.547633 4_1:+57855351 Msa0558850:five_prime_UTR
CTACTATTACCAGGACTCAC+AGG 0.551379 4_1:-57857421 None:intergenic
TATATATAAAAGATGCTTGG+TGG 0.554393 4_1:-57857239 None:intergenic
AACCATTCCCTGCTTTATTG+CGG 0.555375 4_1:-57858567 None:intergenic
CTATATATATAAAAGATGCT+TGG 0.556013 4_1:-57857242 None:intergenic
TGCAGTGTGTGTATCATGGT+TGG 0.557915 4_1:+57855942 Msa0558850:CDS
GGATTAACTCCAGACCCAAA+AGG 0.558427 4_1:+57857039 Msa0558850:CDS
TAGTAGTAGTAACCTTGAAG+TGG 0.559062 4_1:+57855685 Msa0558850:CDS
CTAGAGAACAGCTTATGGAC+AGG 0.559328 4_1:+57857954 Msa0558850:CDS
ATCAATTTCTGGTATGAATG+GGG 0.563979 4_1:-57856447 None:intergenic
GATTCAAAGATATTATTACA+AGG 0.564688 4_1:+57856417 Msa0558850:CDS
ACCTCATGCTAAGAAAGTGA+TGG 0.565040 4_1:+57855802 Msa0558850:CDS
GTGAATAATGCTGATAGAGA+AGG 0.565634 4_1:+57857131 Msa0558850:intron
CAACACTTCCATTAATCCGT+GGG 0.573800 4_1:+57855606 Msa0558850:CDS
AACAAGCAAAATCATCATTG+AGG 0.576161 4_1:-57859100 None:intergenic
TGTTCTCTAGGAGGTGTAGG+AGG 0.578002 4_1:-57857941 None:intergenic
AGCTGTTCTCTAGGAGGTGT+AGG 0.578889 4_1:-57857944 None:intergenic
TACTTTCATTCGCATTGTCG+CGG 0.580974 4_1:+57858627 Msa0558850:CDS
CCTCATGCTAAGAAAGTGAT+GGG 0.581206 4_1:+57855803 Msa0558850:CDS
TCAACACTTCCATTAATCCG+TGG 0.582388 4_1:+57855605 Msa0558850:CDS
AATTGATGTTGTTATATGGT+GGG 0.583888 4_1:+57855826 Msa0558850:CDS
CACTTGTGAGTTGAAGAACA+TGG 0.584686 4_1:-57855579 None:intergenic
TGACCGAACTTCGTTTCCCT+AGG 0.584987 4_1:-57855367 None:intergenic
GAATTGATGTTGTTATATGG+TGG 0.587435 4_1:+57855825 Msa0558850:CDS
TCGACAAAATTGTACCTCGA+TGG 0.594278 4_1:+57857482 Msa0558850:CDS
CAGGTTCAGAGAAATTTGAC+TGG 0.594416 4_1:+57855729 Msa0558850:CDS
ATTCCTCAGGCACCTCGTGA+AGG 0.595702 4_1:+57855995 Msa0558850:CDS
GTAATAATATCTTTGAATCG+AGG 0.598480 4_1:-57856413 None:intergenic
TCCATAAGCTGTTCTCTAGG+AGG 0.599001 4_1:-57857950 None:intergenic
TTGTGCAGAATAATATCTTG+TGG 0.604851 4_1:+57856372 Msa0558850:CDS
GGTACTGATTGAAAACCTCA+TGG 0.605597 4_1:+57856987 Msa0558850:CDS
TCTTCAATTGAGAAATCAAG+TGG 0.606160 4_1:-57857161 None:intergenic
GAAGGATTGATCAATGGGGT+AGG 0.612476 4_1:+57855918 Msa0558850:CDS
GTCTGTTGTGAAACCTGTGA+AGG 0.615871 4_1:+57858959 Msa0558850:CDS
GGGATAGAAATGAGAATGCA+TGG 0.630522 4_1:+57855846 Msa0558850:CDS
CTATAAGAGCCTCAATGTGG+TGG 0.632112 4_1:+57858499 Msa0558850:CDS
TGTGCATATGGAACATGTGA+AGG 0.634120 4_1:-57857012 None:intergenic
GGTCCTTCACGAGGTGCCTG+AGG 0.637367 4_1:-57855998 None:intergenic
GAACAGGTACTGGAGCCATA+CGG 0.641416 4_1:+57858451 Msa0558850:intron
GCATCACTTCCACCACATTG+AGG 0.645928 4_1:-57858508 None:intergenic
TAAAAGGAATTACCTCAACA+TGG 0.650469 4_1:-57857555 None:intergenic
TCAATTTCTGGTATGAATGG+GGG 0.651927 4_1:-57856446 None:intergenic
GGTGATCAAGTTGATTGGAG+AGG 0.656464 4_1:+57857899 Msa0558850:CDS
AACATGCAATTTCAGGTACG+AGG 0.660550 4_1:+57856966 Msa0558850:intron
ATTGTTGCCGCAATAAAGCA+GGG 0.660696 4_1:+57858560 Msa0558850:CDS
GCTAGTGGGATGTGAAGTGA+AGG 0.662430 4_1:-57855527 None:intergenic
GTGCATATGGAACATGTGAA+GGG 0.665250 4_1:-57857011 None:intergenic
TGTTAATGGAGAAGGTGACA+AGG 0.682450 4_1:-57855657 None:intergenic
CCTCGATGGATTCTTCATGT+GGG 0.689671 4_1:+57857496 Msa0558850:CDS
GAACATGTGAAGGGTCCATG+AGG 0.693173 4_1:-57857002 None:intergenic
AATTTGACTGGTACTCACAG+TGG 0.710936 4_1:+57855741 Msa0558850:CDS
AGCCTATAAGAGCCTCAATG+TGG 0.719694 4_1:+57858496 Msa0558850:CDS
GTTACCGGAGGTCCTTCACG+AGG 0.730118 4_1:-57856007 None:intergenic
TTGGAGAGGAAAATATAGTG+GGG 0.734428 4_1:+57857913 Msa0558850:CDS
CCCACATGAAGAATCCATCG+AGG 0.768798 4_1:-57857496 None:intergenic
GAAGGAAGGATTGATCAATG+GGG 0.799393 4_1:+57855914 Msa0558850:CDS

CRISPR-GE

badsite warning sgRNA_sequence Strand Position Region GC_content
!!! TTTTTTTTGACAAAATTATA+CGG + chr4_1:57856882-57856901 Msa0558850:intron 10.0%
!!! AAAAATGTTTGTTACTTAAA+GGG + chr4_1:57856067-57856086 Msa0558850:intron 15.0%
!! ATAATTAAAATGTAGTTGTT+TGG - chr4_1:57856848-57856867 None:intergenic 15.0%
!!! ACAACTACATTTTAATTATA+CGG + chr4_1:57856849-57856868 Msa0558850:intron 15.0%
!!! GTATTTTTTTTCAATAGATT+AGG + chr4_1:57857726-57857745 Msa0558850:intron 15.0%
!!! TAATGTTACTAACTTTTTTT+AGG + chr4_1:57857766-57857785 Msa0558850:intron 15.0%
!!! TTTTTAGGAACAAAAAATAA+TGG + chr4_1:57857781-57857800 Msa0558850:intron 15.0%
!! AAAAACTTCACATATATTAA+AGG - chr4_1:57858055-57858074 None:intergenic 15.0%
!! AGAAATTATTAAATTTGAAC+AGG + chr4_1:57858435-57858454 Msa0558850:intron 15.0%
!! AAATGTCTCTTATAAATATA+GGG - chr4_1:57858775-57858794 None:intergenic 15.0%
!! ACAATTGTTAATTCATATAT+TGG + chr4_1:57859005-57859024 Msa0558850:CDS 15.0%
!!! AAGAACATGGATTTTTTTAA+TGG - chr4_1:57855569-57855588 None:intergenic 20.0%
!!! GAAAAATGTTTGTTACTTAA+AGG + chr4_1:57856066-57856085 Msa0558850:intron 20.0%
!!! TTAACACTAAATTGCATTTT+TGG - chr4_1:57856153-57856172 None:intergenic 20.0%
!! TGCAATTTAGTGTTAAAAAA+TGG + chr4_1:57856157-57856176 Msa0558850:intron 20.0%
!! GATTCAAAGATATTATTACA+AGG + chr4_1:57856417-57856436 Msa0558850:CDS 20.0%
!! AAATTAAAATCATACCCATA+AGG - chr4_1:57856512-57856531 None:intergenic 20.0%
!!! CTTAATGTAATTGTTTTTAG+TGG + chr4_1:57856591-57856610 Msa0558850:intron 20.0%
!!! TGATATAATTATTGATGATC+TGG + chr4_1:57856622-57856641 Msa0558850:intron 20.0%
!! GAAAGATATACTATTATGTT+AGG - chr4_1:57856936-57856955 None:intergenic 20.0%
!! CTATATATATAAAAGATGCT+TGG - chr4_1:57857245-57857264 None:intergenic 20.0%
!! ACTAATCTGTGAATTATAAA+AGG - chr4_1:57857574-57857593 None:intergenic 20.0%
!! AAAGTTAGTAACATTATTTG+AGG - chr4_1:57857762-57857781 None:intergenic 20.0%
!!! TTTTACACTTGAAAATCTAT+TGG - chr4_1:57858110-57858129 None:intergenic 20.0%
!!! AATATGCTGAAAACATATTT+TGG - chr4_1:57858260-57858279 None:intergenic 20.0%
!! TATAATAAGTTATCCAAGAA+AGG - chr4_1:57858290-57858309 None:intergenic 20.0%
!! ATAATTTCTAATCAAGAACA+TGG - chr4_1:57858424-57858443 None:intergenic 20.0%
!! CAAATGTCTCTTATAAATAT+AGG - chr4_1:57858776-57858795 None:intergenic 20.0%
!!! CAACTTCTCTCTTTTATTTT+TGG + chr4_1:57855320-57855339 Msa0558850:five_prime_UTR 25.0%
! TTTAAGAGAAGTTGAAACTT+GGG - chr4_1:57855413-57855432 None:intergenic 25.0%
! ATTTAAGAGAAGTTGAAACT+TGG - chr4_1:57855414-57855433 None:intergenic 25.0%
! AATTGATGTTGTTATATGGT+GGG + chr4_1:57855826-57855845 Msa0558850:CDS 25.0%
!! CAAACATTTTTCTTCAAAGA+CGG - chr4_1:57856058-57856077 None:intergenic 25.0%
!! AATGTGTAACAATTTGCTTT+AGG + chr4_1:57856196-57856215 Msa0558850:intron 25.0%
!! ATGTGTAACAATTTGCTTTA+GGG + chr4_1:57856197-57856216 Msa0558850:intron 25.0%
! CATGATAACAAAACAAACAA+TGG - chr4_1:57856270-57856289 None:intergenic 25.0%
! AGTTTATGCAAAAGTAAATG+AGG - chr4_1:57856297-57856316 None:intergenic 25.0%
!! AGAATAATATCTTGTGGTTT+TGG + chr4_1:57856378-57856397 Msa0558850:CDS 25.0%
! GTAATAATATCTTTGAATCG+AGG - chr4_1:57856416-57856435 None:intergenic 25.0%
!!! AATTATTGATGATCTGGTTT+TGG + chr4_1:57856628-57856647 Msa0558850:intron 25.0%
! AAAAATGCTATAAACTCATG+AGG + chr4_1:57856811-57856830 Msa0558850:intron 25.0%
! TTAATTGAACATGCAATTTC+AGG + chr4_1:57856959-57856978 Msa0558850:intron 25.0%
!! TGTATATATGTCTACCTTTT+GGG - chr4_1:57857056-57857075 None:intergenic 25.0%
!! ATGTATATATGTCTACCTTT+TGG - chr4_1:57857057-57857076 None:intergenic 25.0%
! GTGTCATATATGAAACAAAT+AGG - chr4_1:57857090-57857109 None:intergenic 25.0%
! ATTGAAGAGTTAGATATCAA+TGG + chr4_1:57857176-57857195 Msa0558850:CDS 25.0%
! TATATATAAAAGATGCTTGG+TGG - chr4_1:57857242-57857261 None:intergenic 25.0%
!!! ATTTGCACTCAGTTTTATAT+AGG + chr4_1:57857327-57857346 Msa0558850:intron 25.0%
! CATAGAAAATTTCTTTCGAA+CGG - chr4_1:57857386-57857405 None:intergenic 25.0%
!! GTTTACTTTATTTGATCAAC+GGG - chr4_1:57857600-57857619 None:intergenic 25.0%
!! GGTTTACTTTATTTGATCAA+CGG - chr4_1:57857601-57857620 None:intergenic 25.0%
! ACAATATCAAATTCAATCAC+TGG + chr4_1:57857704-57857723 Msa0558850:intron 25.0%
! TAGTAACATTATTTGAGGAA+TGG - chr4_1:57857757-57857776 None:intergenic 25.0%
!!! TTGTGATTGGTTTTAGAAAA+TGG + chr4_1:57857861-57857880 Msa0558850:CDS 25.0%
! TAACTCACATAAGATTGAAT+TGG + chr4_1:57857981-57858000 Msa0558850:intron 25.0%
!! TGCTAAAAATTTGTTCTATC+TGG + chr4_1:57858146-57858165 Msa0558850:intron 25.0%
!! ACTTATTTGAGTTTGTTTAG+TGG + chr4_1:57858173-57858192 Msa0558850:intron 25.0%
! TATTAAATTTGAACAGGTAC+TGG + chr4_1:57858441-57858460 Msa0558850:intron 25.0%
! AACTTGGAGAAATATAATGA+AGG - chr4_1:57858729-57858748 None:intergenic 25.0%
! TTCATTATATTTCTCCAAGT+TGG + chr4_1:57858728-57858747 Msa0558850:intron 25.0%
! TCTCTTATAAATAAGATCAG+AGG + chr4_1:57858865-57858884 Msa0558850:intron 25.0%
! CTCTTATAAATAAGATCAGA+GGG + chr4_1:57858866-57858885 Msa0558850:intron 25.0%
!!! TTGTTACTTAAAAAGTGCTT+TGG + chr4_1:57858929-57858948 Msa0558850:CDS 25.0%
!! ATGATGATTTTGCTTGTTTA+TGG + chr4_1:57859105-57859124 Msa0558850:CDS 25.0%
TGAAACTTGGGAACAATTAT+TGG - chr4_1:57855401-57855420 None:intergenic 30.0%
! TCACTTTCTTCTTTTGTACA+AGG + chr4_1:57855472-57855491 Msa0558850:five_prime_UTR 30.0%
! CACTTTCTTCTTTTGTACAA+GGG + chr4_1:57855473-57855492 Msa0558850:five_prime_UTR 30.0%
! TTTGTGTTTTATGTGCTAGT+GGG - chr4_1:57855544-57855563 None:intergenic 30.0%
CTACTACTAGAATCTGTTAA+TGG - chr4_1:57855674-57855693 None:intergenic 30.0%
! CTTTTGTCAAGATCACATAT+TGG - chr4_1:57855779-57855798 None:intergenic 30.0%
TGGGAATTGATGTTGTTATA+TGG + chr4_1:57855822-57855841 Msa0558850:CDS 30.0%
GAATTGATGTTGTTATATGG+TGG + chr4_1:57855825-57855844 Msa0558850:CDS 30.0%
!! TATCATGGTTGGTGTTTTAA+TGG + chr4_1:57855953-57855972 Msa0558850:CDS 30.0%
CGAAACCCAAAATTAGTTAA+GGG + chr4_1:57856126-57856145 Msa0558850:intron 30.0%
! TTGGTCCCTTAACTAATTTT+GGG - chr4_1:57856134-57856153 None:intergenic 30.0%
! TTTGGTCCCTTAACTAATTT+TGG - chr4_1:57856135-57856154 None:intergenic 30.0%
ATATTATTCTGCACAATGCT+TGG - chr4_1:57856368-57856387 None:intergenic 30.0%
TTGTGCAGAATAATATCTTG+TGG + chr4_1:57856372-57856391 Msa0558850:CDS 30.0%
!! ATCAATTTCTGGTATGAATG+GGG - chr4_1:57856450-57856469 None:intergenic 30.0%
!! CATCAATTTCTGGTATGAAT+GGG - chr4_1:57856451-57856470 None:intergenic 30.0%
!! TCATCAATTTCTGGTATGAA+TGG - chr4_1:57856452-57856471 None:intergenic 30.0%
!! AATGATGGATCATCAATTTC+TGG - chr4_1:57856461-57856480 None:intergenic 30.0%
GAAACAGAGATATTCCTTAT+GGG + chr4_1:57856495-57856514 Msa0558850:CDS 30.0%
AAATCCAACACATATGCATA+TGG + chr4_1:57856563-57856582 Msa0558850:intron 30.0%
AGCATGCAAATTATGCTATA+GGG - chr4_1:57856702-57856721 None:intergenic 30.0%
TAGCATGCAAATTATGCTAT+AGG - chr4_1:57856703-57856722 None:intergenic 30.0%
AGTCATATAAGCTAACTGTT+TGG + chr4_1:57856905-57856924 Msa0558850:intron 30.0%
TCTTCAATTGAGAAATCAAG+TGG - chr4_1:57857164-57857183 None:intergenic 30.0%
TTTATATCTTCTCCATGTTG+AGG + chr4_1:57857543-57857562 Msa0558850:CDS 30.0%
TAAAAGGAATTACCTCAACA+TGG - chr4_1:57857558-57857577 None:intergenic 30.0%
AGTTATGCTGTCATAGATAA+TGG + chr4_1:57857641-57857660 Msa0558850:intron 30.0%
!! GAACAAAAAATAATGGATGC+TGG + chr4_1:57857788-57857807 Msa0558850:CDS 30.0%
! AAATGGTTAAAGAAGTATGC+AGG + chr4_1:57857878-57857897 Msa0558850:CDS 30.0%
ATTGGAGAGGAAAATATAGT+GGG + chr4_1:57857912-57857931 Msa0558850:CDS 30.0%
CATAAGATTGAATTGGAACA+TGG + chr4_1:57857988-57858007 Msa0558850:intron 30.0%
TGTTGCATTTAGACAATGTT+TGG - chr4_1:57858391-57858410 None:intergenic 30.0%
AAACATTGTCTAAATGCAAC+AGG + chr4_1:57858390-57858409 Msa0558850:intron 30.0%
ATCATATCAGTTGCTTCAAT+TGG + chr4_1:57858536-57858555 Msa0558850:CDS 30.0%
TCATATCAGTTGCTTCAATT+GGG + chr4_1:57858537-57858556 Msa0558850:CDS 30.0%
AAGAAATTCTATAGTTGTGC+TGG + chr4_1:57858601-57858620 Msa0558850:CDS 30.0%
TTTATAAGAGACATTTGAGC+CGG + chr4_1:57858779-57858798 Msa0558850:intron 30.0%
TCATACACATCAATTTATGC+CGG - chr4_1:57858801-57858820 None:intergenic 30.0%
AACAAGCAAAATCATCATTG+AGG - chr4_1:57859103-57859122 None:intergenic 30.0%
! ATGATTTTGCTTGTTTATGG+TGG + chr4_1:57859108-57859127 Msa0558850:CDS 30.0%
! TCTTTTGTACAAGGGAACAA+TGG + chr4_1:57855481-57855500 Msa0558850:exon 35.0%
! GTTTGTGTTTTATGTGCTAG+TGG - chr4_1:57855545-57855564 None:intergenic 35.0%
!!! TGAATTTTGAAGTGTTCCCA+CGG - chr4_1:57855625-57855644 None:intergenic 35.0%
CTAGAATCTGTTAATGGAGA+AGG - chr4_1:57855668-57855687 None:intergenic 35.0%
TAGTAGTAGTAACCTTGAAG+TGG + chr4_1:57855685-57855704 Msa0558850:CDS 35.0%
AGATCACATATTGGCATCAA+AGG - chr4_1:57855770-57855789 None:intergenic 35.0%
!! GATAAAGGTGCTAATCTATG+AGG - chr4_1:57855893-57855912 None:intergenic 35.0%
AGATTAGCACCTTTATCTGA+AGG + chr4_1:57855896-57855915 Msa0558850:CDS 35.0%
TCAATCCTTCCTTCAGATAA+AGG - chr4_1:57855908-57855927 None:intergenic 35.0%
TGAAGGAAGGATTGATCAAT+GGG + chr4_1:57855913-57855932 Msa0558850:CDS 35.0%
! ACATTTTTCTTCAAAGACGG+CGG - chr4_1:57856055-57856074 None:intergenic 35.0%
ACATCTGTTTCGTTTCACTT+TGG - chr4_1:57856094-57856113 None:intergenic 35.0%
GTGAAACGAAACAGATGTAA+AGG + chr4_1:57856096-57856115 Msa0558850:intron 35.0%
!!! ACTAATTTTGGGTTTCGCTT+TGG - chr4_1:57856123-57856142 None:intergenic 35.0%
GCGAAACCCAAAATTAGTTA+AGG + chr4_1:57856125-57856144 Msa0558850:intron 35.0%
TTTACACTGCAACACATCTA+TGG - chr4_1:57856238-57856257 None:intergenic 35.0%
TTGAATCGAGGATCAGTATT+TGG - chr4_1:57856404-57856423 None:intergenic 35.0%
!! TCAATTTCTGGTATGAATGG+GGG - chr4_1:57856449-57856468 None:intergenic 35.0%
! TCCATCATTTGCTAGCTTAA+TGG + chr4_1:57856472-57856491 Msa0558850:CDS 35.0%
! CCATCATTTGCTAGCTTAAT+GGG + chr4_1:57856473-57856492 Msa0558850:CDS 35.0%
GGAAACAGAGATATTCCTTA+TGG + chr4_1:57856494-57856513 Msa0558850:CDS 35.0%
TATGCCATATGCATATGTGT+TGG - chr4_1:57856570-57856589 None:intergenic 35.0%
GTTAATCCATAGTGTGCATA+TGG - chr4_1:57857027-57857046 None:intergenic 35.0%
GTGAATAATGCTGATAGAGA+AGG + chr4_1:57857131-57857150 Msa0558850:intron 35.0%
AATAATGCTGATAGAGAAGG+AGG + chr4_1:57857134-57857153 Msa0558850:CDS 35.0%
AATGGTTTCACTGCAAATCT+GGG + chr4_1:57857194-57857213 Msa0558850:CDS 35.0%
TGCATCTTCTGTTGAAACTA+AGG + chr4_1:57857280-57857299 Msa0558850:CDS 35.0%
CAAATCAGTCTACTATTACC+AGG - chr4_1:57857433-57857452 None:intergenic 35.0%
CTGGTAATAGTAGACTGATT+TGG + chr4_1:57857431-57857450 Msa0558850:CDS 35.0%
TGGTCAAGAAAATTGGCATA+AGG + chr4_1:57857808-57857827 Msa0558850:CDS 35.0%
GATTGGAGAGGAAAATATAG+TGG + chr4_1:57857911-57857930 Msa0558850:CDS 35.0%
TTGGAGAGGAAAATATAGTG+GGG + chr4_1:57857913-57857932 Msa0558850:CDS 35.0%
TTAGTGGCATAAACACTTGT+AGG + chr4_1:57858189-57858208 Msa0558850:intron 35.0%
CATATTTCCACAACCTTTCT+TGG + chr4_1:57858274-57858293 Msa0558850:intron 35.0%
AAGTTATCCAAGAAAGGTTG+TGG - chr4_1:57858284-57858303 None:intergenic 35.0%
GAGTATATACGTAACCAACT+TGG - chr4_1:57858745-57858764 None:intergenic 35.0%
GTCTCTTATAAATATAGGGC+CGG - chr4_1:57858771-57858790 None:intergenic 35.0%
TGTTTAGCACTCCAATTCCT+AGG + chr4_1:57855350-57855369 Msa0558850:five_prime_UTR 40.0%
GTTTAGCACTCCAATTCCTA+GGG + chr4_1:57855351-57855370 Msa0558850:five_prime_UTR 40.0%
AACTTCGTTTCCCTAGGAAT+TGG - chr4_1:57855364-57855383 None:intergenic 40.0%
ATTCCTAGGGAAACGAAGTT+CGG + chr4_1:57855364-57855383 Msa0558850:five_prime_UTR 40.0%
! CACTTGTGAGTTGAAGAACA+TGG - chr4_1:57855582-57855601 None:intergenic 40.0%
TCAACACTTCCATTAATCCG+TGG + chr4_1:57855605-57855624 Msa0558850:CDS 40.0%
CAACACTTCCATTAATCCGT+GGG + chr4_1:57855606-57855625 Msa0558850:CDS 40.0%
TGTTAATGGAGAAGGTGACA+AGG - chr4_1:57855660-57855679 None:intergenic 40.0%
GATGAACCAGAAGTTGAAAC+AGG + chr4_1:57855710-57855729 Msa0558850:CDS 40.0%
TCTGAACCTGTTTCAACTTC+TGG - chr4_1:57855719-57855738 None:intergenic 40.0%
CAGGTTCAGAGAAATTTGAC+TGG + chr4_1:57855729-57855748 Msa0558850:CDS 40.0%
AATTTGACTGGTACTCACAG+TGG + chr4_1:57855741-57855760 Msa0558850:CDS 40.0%
ACCTCATGCTAAGAAAGTGA+TGG + chr4_1:57855802-57855821 Msa0558850:CDS 40.0%
CCTCATGCTAAGAAAGTGAT+GGG + chr4_1:57855803-57855822 Msa0558850:CDS 40.0%
GGGATAGAAATGAGAATGCA+TGG + chr4_1:57855846-57855865 Msa0558850:CDS 40.0%
TAGCACCTTTATCTGAAGGA+AGG + chr4_1:57855900-57855919 Msa0558850:CDS 40.0%
CTGAAGGAAGGATTGATCAA+TGG + chr4_1:57855912-57855931 Msa0558850:CDS 40.0%
GAAGGAAGGATTGATCAATG+GGG + chr4_1:57855914-57855933 Msa0558850:CDS 40.0%
!!! GGTTGGTGTTTTAATGGATC+AGG + chr4_1:57855959-57855978 Msa0558850:CDS 40.0%
TGATTGCAAGTTCATTCCTC+AGG + chr4_1:57855982-57856001 Msa0558850:CDS 40.0%
!! GTATCAGAAGGACTAGTTAC+CGG - chr4_1:57856025-57856044 None:intergenic 40.0%
!! GGCGGTTAAAAAGTATCAGA+AGG - chr4_1:57856037-57856056 None:intergenic 40.0%
!!! AGCAGCTACACATGCTTTTT+TGG - chr4_1:57856342-57856361 None:intergenic 40.0%
CCCATTAAGCTAGCAAATGA+TGG - chr4_1:57856476-57856495 None:intergenic 40.0%
GCATGCTATGCTACTATTCT+AGG + chr4_1:57856715-57856734 Msa0558850:intron 40.0%
! AACATGCAATTTCAGGTACG+AGG + chr4_1:57856966-57856985 Msa0558850:intron 40.0%
!! GGTACTGATTGAAAACCTCA+TGG + chr4_1:57856987-57857006 Msa0558850:CDS 40.0%
GTGCATATGGAACATGTGAA+GGG - chr4_1:57857014-57857033 None:intergenic 40.0%
TGTGCATATGGAACATGTGA+AGG - chr4_1:57857015-57857034 None:intergenic 40.0%
CATGTTCCATATGCACACTA+TGG + chr4_1:57857018-57857037 Msa0558850:CDS 40.0%
!! ATATGTCTACCTTTTGGGTC+TGG - chr4_1:57857051-57857070 None:intergenic 40.0%
CAATGGTTTCACTGCAAATC+TGG + chr4_1:57857193-57857212 Msa0558850:CDS 40.0%
ACAGAAGATGCAAGTTCATC+TGG - chr4_1:57857272-57857291 None:intergenic 40.0%
ATTTGTATTCCTGTGAGTCC+TGG + chr4_1:57857412-57857431 Msa0558850:CDS 40.0%
! TGGTGCTTTCCGAGAAATTT+TGG + chr4_1:57857451-57857470 Msa0558850:CDS 40.0%
! TTCCGAGAAATTTTGGACTG+TGG + chr4_1:57857458-57857477 Msa0558850:CDS 40.0%
! TCCGAGAAATTTTGGACTGT+GGG + chr4_1:57857459-57857478 Msa0558850:CDS 40.0%
ACCCACAGTCCAAAATTTCT+CGG - chr4_1:57857463-57857482 None:intergenic 40.0%
TCGACAAAATTGTACCTCGA+TGG + chr4_1:57857482-57857501 Msa0558850:CDS 40.0%
AACCATCACACTTGCAGATT+TGG + chr4_1:57857617-57857636 Msa0558850:intron 40.0%
ACCATCACACTTGCAGATTT+GGG + chr4_1:57857618-57857637 Msa0558850:intron 40.0%
TGGATGCTGGTCAAGAAAAT+TGG + chr4_1:57857801-57857820 Msa0558850:CDS 40.0%
!! ATGCAGGTGATCAAGTTGAT+TGG + chr4_1:57857894-57857913 Msa0558850:CDS 40.0%
! TGTAGGTTGTGAGACTGTTT+TGG + chr4_1:57858206-57858225 Msa0558850:intron 40.0%
AACTCTTGCAATTCACCGTA+TGG - chr4_1:57858469-57858488 None:intergenic 40.0%
ATTGTTGCCGCAATAAAGCA+GGG + chr4_1:57858560-57858579 Msa0558850:CDS 40.0%
! AACCATTCCCTGCTTTATTG+CGG - chr4_1:57858570-57858589 None:intergenic 40.0%
TACTTTCATTCGCATTGTCG+CGG + chr4_1:57858627-57858646 Msa0558850:CDS 40.0%
CTTATAAATATAGGGCCGGA+GGG - chr4_1:57858767-57858786 None:intergenic 40.0%
TCTTATAAATATAGGGCCGG+AGG - chr4_1:57858768-57858787 None:intergenic 40.0%
ATTTCTCCAAGAACCTTCAC+AGG - chr4_1:57858975-57858994 None:intergenic 40.0%
! GAAGTGTTCCCACGGATTAA+TGG - chr4_1:57855617-57855636 None:intergenic 45.0%
CTGGTTCATCATCCACTTCA+AGG - chr4_1:57855700-57855719 None:intergenic 45.0%
CCCATCACTTTCTTAGCATG+AGG - chr4_1:57855806-57855825 None:intergenic 45.0%
GAAGGATTGATCAATGGGGT+AGG + chr4_1:57855918-57855937 Msa0558850:CDS 45.0%
AGGTTGCAGTGTGTGTATCA+TGG + chr4_1:57855938-57855957 Msa0558850:CDS 45.0%
TGCAGTGTGTGTATCATGGT+TGG + chr4_1:57855942-57855961 Msa0558850:CDS 45.0%
GGATTAACTCCAGACCCAAA+AGG + chr4_1:57857039-57857058 Msa0558850:CDS 45.0%
GTTTCACTGCAAATCTGGGT+TGG + chr4_1:57857198-57857217 Msa0558850:CDS 45.0%
CTACTATTACCAGGACTCAC+AGG - chr4_1:57857424-57857443 None:intergenic 45.0%
! ACCTCGATGGATTCTTCATG+TGG + chr4_1:57857495-57857514 Msa0558850:CDS 45.0%
! CCTCGATGGATTCTTCATGT+GGG + chr4_1:57857496-57857515 Msa0558850:CDS 45.0%
TCCCAAATCTGCAAGTGTGA+TGG - chr4_1:57857622-57857641 None:intergenic 45.0%
TGCCTTTGTTGGCACAAAAC+AGG - chr4_1:57857834-57857853 None:intergenic 45.0%
!! ACAAGAGCATCTGCCTTTGT+TGG - chr4_1:57857845-57857864 None:intergenic 45.0%
AAGGCAGATGCTCTTGTGAT+TGG + chr4_1:57857848-57857867 Msa0558850:CDS 45.0%
!! GGTGATCAAGTTGATTGGAG+AGG + chr4_1:57857899-57857918 Msa0558850:CDS 45.0%
ACCTCCTAGAGAACAGCTTA+TGG + chr4_1:57857949-57857968 Msa0558850:CDS 45.0%
TCCATAAGCTGTTCTCTAGG+AGG - chr4_1:57857953-57857972 None:intergenic 45.0%
CTGTCCATAAGCTGTTCTCT+AGG - chr4_1:57857956-57857975 None:intergenic 45.0%
CTAGAGAACAGCTTATGGAC+AGG + chr4_1:57857954-57857973 Msa0558850:CDS 45.0%
AGAACAGCTTATGGACAGGT+AGG + chr4_1:57857958-57857977 Msa0558850:intron 45.0%
AGCCTATAAGAGCCTCAATG+TGG + chr4_1:57858496-57858515 Msa0558850:CDS 45.0%
CACCACATTGAGGCTCTTAT+AGG - chr4_1:57858501-57858520 None:intergenic 45.0%
CTATAAGAGCCTCAATGTGG+TGG + chr4_1:57858499-57858518 Msa0558850:CDS 45.0%
GATTGTTGCCGCAATAAAGC+AGG + chr4_1:57858559-57858578 Msa0558850:CDS 45.0%
! ATTTCATCGAAGAGCGTACG+TGG - chr4_1:57858700-57858719 None:intergenic 45.0%
GGTTACGTATATACTCCCTC+CGG + chr4_1:57858749-57858768 Msa0558850:intron 45.0%
GTCTGTTGTGAAACCTGTGA+AGG + chr4_1:57858959-57858978 Msa0558850:CDS 45.0%
GTGAAACCTGTGAAGGTTCT+TGG + chr4_1:57858966-57858985 Msa0558850:CDS 45.0%
TGACCGAACTTCGTTTCCCT+AGG - chr4_1:57855370-57855389 None:intergenic 50.0%
TAGGGAAACGAAGTTCGGTC+AGG + chr4_1:57855369-57855388 Msa0558850:five_prime_UTR 50.0%
GCTAGTGGGATGTGAAGTGA+AGG - chr4_1:57855530-57855549 None:intergenic 50.0%
!! TCAGAAGGACTAGTTACCGG+AGG - chr4_1:57856022-57856041 None:intergenic 50.0%
GAACATGTGAAGGGTCCATG+AGG - chr4_1:57857005-57857024 None:intergenic 50.0%
CCCACATGAAGAATCCATCG+AGG - chr4_1:57857499-57857518 None:intergenic 50.0%
! GGCCTGTTTTGTGCCAACAA+AGG + chr4_1:57857829-57857848 Msa0558850:CDS 50.0%
! TGTTCTCTAGGAGGTGTAGG+AGG - chr4_1:57857944-57857963 None:intergenic 50.0%
! AGCTGTTCTCTAGGAGGTGT+AGG - chr4_1:57857947-57857966 None:intergenic 50.0%
!! GAACAGGTACTGGAGCCATA+CGG + chr4_1:57858451-57858470 Msa0558850:intron 50.0%
GCATCACTTCCACCACATTG+AGG - chr4_1:57858511-57858530 None:intergenic 50.0%
TGCCGCAATAAAGCAGGGAA+TGG + chr4_1:57858565-57858584 Msa0558850:CDS 50.0%
AACGAAGTTCGGTCAGGAGC+TGG + chr4_1:57855375-57855394 Msa0558850:five_prime_UTR 55.0%
ATTCCTCAGGCACCTCGTGA+AGG + chr4_1:57855995-57856014 Msa0558850:CDS 55.0%
GTTACCGGAGGTCCTTCACG+AGG - chr4_1:57856010-57856029 None:intergenic 60.0%
! GGTCCTTCACGAGGTGCCTG+AGG - chr4_1:57856001-57856020 None:intergenic 65.0%
GGCACCTCGTGAAGGACCTC+CGG + chr4_1:57856003-57856022 Msa0558850:CDS 65.0%
Chromosome Type Strat End Strand Name
chr4_1 gene 57855296 57859145 57855296 ID=Msa0558850;Name=Msa0558850
chr4_1 mRNA 57855296 57859145 57855296 ID=Msa0558850-mRNA-1;Parent=Msa0558850;Name=Msa0558850-mRNA-1;_AED=0.09;_eAED=0.17;_QI=204|0.85|0.75|1|1|1|8|0|614
chr4_1 exon 57855296 57856024 57855296 ID=Msa0558850-mRNA-1:exon:17538;Parent=Msa0558850-mRNA-1
chr4_1 exon 57856329 57856516 57856329 ID=Msa0558850-mRNA-1:exon:17539;Parent=Msa0558850-mRNA-1
chr4_1 exon 57856981 57857060 57856981 ID=Msa0558850-mRNA-1:exon:17540;Parent=Msa0558850-mRNA-1
chr4_1 exon 57857132 57857301 57857132 ID=Msa0558850-mRNA-1:exon:17541;Parent=Msa0558850-mRNA-1
chr4_1 exon 57857376 57857564 57857376 ID=Msa0558850-mRNA-1:exon:17542;Parent=Msa0558850-mRNA-1
chr4_1 exon 57857788 57857975 57857788 ID=Msa0558850-mRNA-1:exon:17543;Parent=Msa0558850-mRNA-1
chr4_1 exon 57858457 57858700 57858457 ID=Msa0558850-mRNA-1:exon:17544;Parent=Msa0558850-mRNA-1
chr4_1 exon 57858885 57859145 57858885 ID=Msa0558850-mRNA-1:exon:17545;Parent=Msa0558850-mRNA-1
chr4_1 five_prime_UTR 57855296 57855499 57855296 ID=Msa0558850-mRNA-1:five_prime_utr;Parent=Msa0558850-mRNA-1
chr4_1 CDS 57855500 57856024 57855500 ID=Msa0558850-mRNA-1:cds;Parent=Msa0558850-mRNA-1
chr4_1 CDS 57856329 57856516 57856329 ID=Msa0558850-mRNA-1:cds;Parent=Msa0558850-mRNA-1
chr4_1 CDS 57856981 57857060 57856981 ID=Msa0558850-mRNA-1:cds;Parent=Msa0558850-mRNA-1
chr4_1 CDS 57857132 57857301 57857132 ID=Msa0558850-mRNA-1:cds;Parent=Msa0558850-mRNA-1
chr4_1 CDS 57857376 57857564 57857376 ID=Msa0558850-mRNA-1:cds;Parent=Msa0558850-mRNA-1
chr4_1 CDS 57857788 57857975 57857788 ID=Msa0558850-mRNA-1:cds;Parent=Msa0558850-mRNA-1
chr4_1 CDS 57858457 57858700 57858457 ID=Msa0558850-mRNA-1:cds;Parent=Msa0558850-mRNA-1
chr4_1 CDS 57858885 57859145 57858885 ID=Msa0558850-mRNA-1:cds;Parent=Msa0558850-mRNA-1
Gene Sequence

>Msa0558850

ATGGAAGTTATGTTAGCTTCTTCTCTTCCTTCACTTCACATCCCACTAGCACATAAAACACAAACTCCATTAAAAAAATCCATGTTCTTCAACTCACAAGTGTATTCAACACTTCCATTAATCCGTGGGAACACTTCAAAATTCAAGCTTTTCACTGCCTTGTCACCTTCTCCATTAACAGATTCTAGTAGTAGTAACCTTGAAGTGGATGATGAACCAGAAGTTGAAACAGGTTCAGAGAAATTTGACTGGTACTCACAGTGGTATCCTTTGATGCCAATATGTGATCTTGACAAAAGAGCACCTCATGCTAAGAAAGTGATGGGAATTGATGTTGTTATATGGTGGGATAGAAATGAGAATGCATGGCAAGTTTTTGATGATGCTTGTCCTCATAGATTAGCACCTTTATCTGAAGGAAGGATTGATCAATGGGGTAGGTTGCAGTGTGTGTATCATGGTTGGTGTTTTAATGGATCAGGTGATTGCAAGTTCATTCCTCAGGCACCTCGTGAAGGACCTCCGATTCATACATCCAAAAAAGCATGTGTAGCTGCTTATCCAAGCATTGTGCAGAATAATATCTTGTGGTTTTGGCCAAATACTGATCCTCGATTCAAAGATATTATTACAAGGAAAACACCCCCATTCATACCAGAAATTGATGATCCATCATTTGCTAGCTTAATGGGAAACAGAGATATTCCTTATGGGTACGAGGTACTGATTGAAAACCTCATGGACCCTTCACATGTTCCATATGCACACTATGGATTAACTCCAGACCCAAAAGTGAATAATGCTGATAGAGAAGGAGGAAGACCACTTGATTTCTCAATTGAAGAGTTAGATATCAATGGTTTCACTGCAAATCTGGGTTGGAGCAAAAGCAAATTTATACCACCAAGCATCTTTTATATATATAGTGATCCAGATGAACTTGCATCTTCTGTTGAAACTAAGAAATCATCCGTTCGAAAGAAATTTTCTATGATCTTTATTTGTATTCCTGTGAGTCCTGGTAATAGTAGACTGATTTGGTGCTTTCCGAGAAATTTTGGACTGTGGGTCGACAAAATTGTACCTCGATGGATTCTTCATGTGGGACAAAACTTGATTCTAGATTCAGATTTATATCTTCTCCATGTTGAGGAACAAAAAATAATGGATGCTGGTCAAGAAAATTGGCATAAGGCCTGTTTTGTGCCAACAAAGGCAGATGCTCTTGTGATTGGTTTTAGAAAATGGTTAAAGAAGTATGCAGGTGATCAAGTTGATTGGAGAGGAAAATATAGTGGGGCTCTGCCTCCTACACCTCCTAGAGAACAGCTTATGGACAGGTACTGGAGCCATACGGTGAATTGCAAGAGTTGCAATTTAGCCTATAAGAGCCTCAATGTGGTGGAAGTGATGCTGCAGATCATATCAGTTGCTTCAATTGGGATTGTTGCCGCAATAAAGCAGGGAATGGTTTCAGCTGCAACAAGAAATTCTATAGTTGTGCTGGCTATACTTTCATTCGCATTGTCGCGGTTGTTAGCTCACTTCATTTACAAAAACTTTCGATATCATGACTTCAACCACAGGGAGTATGTAGTGAAGTTCTGTAAAAACAAAGCTTGTAGTTATTGTTACTTAAAAAGTGCTTTGGAACATTTGTCTGTTGTGAAACCTGTGAAGGTTCTTGGAGAAATCATTCAGATGACAATTGTTAATTCATATATTGGTTTTGTGATGTGCAACATCAATGTTTTCTTCTCTATGCAATACAATCGTGTTCGTGTGACTATTGCATTATGCCTCAATGATGATTTTGCTTGTTTATGGTGGTTGATACTTGATTGA

Protein sequence

>Msa0558850

MEVMLASSLPSLHIPLAHKTQTPLKKSMFFNSQVYSTLPLIRGNTSKFKLFTALSPSPLTDSSSSNLEVDDEPEVETGSEKFDWYSQWYPLMPICDLDKRAPHAKKVMGIDVVIWWDRNENAWQVFDDACPHRLAPLSEGRIDQWGRLQCVYHGWCFNGSGDCKFIPQAPREGPPIHTSKKACVAAYPSIVQNNILWFWPNTDPRFKDIITRKTPPFIPEIDDPSFASLMGNRDIPYGYEVLIENLMDPSHVPYAHYGLTPDPKVNNADREGGRPLDFSIEELDINGFTANLGWSKSKFIPPSIFYIYSDPDELASSVETKKSSVRKKFSMIFICIPVSPGNSRLIWCFPRNFGLWVDKIVPRWILHVGQNLILDSDLYLLHVEEQKIMDAGQENWHKACFVPTKADALVIGFRKWLKKYAGDQVDWRGKYSGALPPTPPREQLMDRYWSHTVNCKSCNLAYKSLNVVEVMLQIISVASIGIVAAIKQGMVSAATRNSIVVLAILSFALSRLLAHFIYKNFRYHDFNHREYVVKFCKNKACSYCYLKSALEHLSVVKPVKVLGEIIQMTIVNSYIGFVMCNINVFFSMQYNRVRVTIALCLNDDFACLWWLILD*