AlfalfaGEDB Alfalfa Gene Editing Database

M. sativa cultivar zhongmu-4 / Msa0072910

Query id Subject id identity % alignment length mismatches gap openings q. start q. end s. start s. end e-value bit score
Msa0072910 MtrunA17_Chr1g0179811 96.494 542 5 2 1 540 1 530 0.0 1070
Msa0072910 MtrunA17_Chr0c19g0493771 50.658 456 208 6 87 540 199 639 8.40e-155 458
Msa0072910 MtrunA17_Chr5g0396521 43.504 508 234 13 75 545 75 566 7.20e-132 395
Msa0072910 MtrunA17_Chr7g0248991 49.326 371 171 6 118 487 13 367 1.72e-118 354
Msa0072910 MtrunA17_Chr7g0215181 29.867 452 273 15 80 522 66 482 1.85e-44 164
Msa0072910 MtrunA17_Chr6g0457421 28.279 488 268 18 64 522 46 480 2.19e-42 159
Msa0072910 MtrunA17_Chr2g0313821 27.356 435 268 11 105 524 90 491 1.41e-38 148
Msa0072910 MtrunA17_Chr2g0313831 26.869 428 259 13 115 524 100 491 1.51e-37 145
Msa0072910 MtrunA17_Chr2g0307291 28.571 413 266 12 115 522 103 491 1.68e-37 145
Msa0072910 MtrunA17_Chr2g0313771 27.311 476 303 14 73 537 68 511 2.55e-37 144
Msa0072910 MtrunA17_Chr8g0351401 25.597 461 296 11 100 537 62 498 6.92e-37 143
Msa0072910 MtrunA17_Chr5g0446131 25.000 424 271 12 115 524 99 489 2.73e-36 141
Msa0072910 MtrunA17_Chr2g0313761 27.177 379 247 9 150 522 129 484 4.66e-36 140
Msa0072910 MtrunA17_Chr2g0313751 27.830 424 259 13 115 524 128 518 5.20e-36 141
Msa0072910 MtrunA17_Chr1g0193811 26.376 436 289 13 97 525 82 492 5.67e-36 140
Msa0072910 MtrunA17_Chr8g0351311 27.293 447 282 12 110 537 78 500 1.06e-35 140
Msa0072910 MtrunA17_Chr8g0354511 25.948 501 309 13 54 525 33 500 1.54e-35 139
Msa0072910 MtrunA17_Chr8g0354531 26.682 446 279 11 94 525 210 621 1.65e-35 140
Msa0072910 MtrunA17_Chr8g0351421 26.362 459 290 12 103 537 64 498 2.40e-35 139
Msa0072910 MtrunA17_Chr8g0351441 25.386 453 291 11 108 537 69 497 2.51e-35 139
Msa0072910 MtrunA17_Chr2g0313801 28.670 436 241 16 115 524 100 491 4.19e-35 138
Msa0072910 MtrunA17_Chr2g0307301 28.193 415 265 12 115 522 103 491 2.88e-34 135
Msa0072910 MtrunA17_Chr2g0288661 27.313 454 287 16 106 543 94 520 3.52e-34 135
Msa0072910 MtrunA17_Chr4g0067191 27.097 465 281 12 102 528 50 494 3.60e-34 135
Msa0072910 MtrunA17_Chr8g0351391 26.398 447 285 12 110 537 78 499 3.82e-34 135
Msa0072910 MtrunA17_Chr8g0354571 24.950 501 314 13 54 525 33 500 3.89e-34 135
Msa0072910 MtrunA17_Chr8g0351461 26.049 453 288 12 108 537 69 497 3.92e-34 135
Msa0072910 MtrunA17_Chr1g0204271 28.995 438 264 17 110 527 72 482 9.82e-34 134
Msa0072910 MtrunA17_Chr2g0313791 26.923 416 269 14 115 524 100 486 1.44e-33 134
Msa0072910 MtrunA17_Chr2g0313781 25.702 463 302 14 80 524 65 503 8.07e-33 132
Msa0072910 MtrunA17_Chr5g0403351 24.453 503 321 15 59 533 20 491 3.40e-32 129
Msa0072910 MtrunA17_Chr5g0445441 27.477 444 285 11 99 531 104 521 7.97e-32 129
Msa0072910 MtrunA17_Chr2g0313811 26.651 439 258 15 115 524 100 503 2.59e-31 127
Msa0072910 MtrunA17_Chr5g0446151 27.309 498 302 15 63 536 27 488 2.69e-30 124
Msa0072910 MtrunA17_Chr3g0101691 26.316 475 298 16 69 522 30 473 8.12e-30 122
Msa0072910 MtrunA17_Chr4g0063221 25.747 435 281 15 102 524 90 494 2.70e-29 121
Msa0072910 MtrunA17_Chr7g0255131 25.641 429 270 14 115 523 80 479 3.68e-29 120
Msa0072910 MtrunA17_Chr3g0101571 26.115 471 290 14 74 522 33 467 7.82e-29 119
Msa0072910 MtrunA17_Chr4g0058281 25.427 468 310 11 76 529 45 487 8.74e-29 120
Msa0072910 MtrunA17_Chr4g0014051 27.021 433 271 14 105 524 103 503 1.05e-28 119
Msa0072910 MtrunA17_Chr5g0445381 26.786 448 291 11 100 536 95 516 1.24e-28 119
Msa0072910 MtrunA17_Chr3g0119681 24.249 433 282 13 115 524 81 490 1.79e-28 119
Msa0072910 MtrunA17_Chr3g0101711 24.746 493 310 14 72 536 32 491 1.86e-28 119
Msa0072910 MtrunA17_Chr1g0184421 26.517 445 275 19 115 541 82 492 2.08e-28 118
Msa0072910 MtrunA17_Chr5g0446161 25.859 495 308 16 65 536 29 487 2.15e-28 118
Msa0072910 MtrunA17_Chr5g0445461 26.608 451 280 13 99 531 63 480 4.84e-28 117
Msa0072910 MtrunA17_Chr1g0184461 25.835 449 285 18 109 541 76 492 7.73e-28 117
Msa0072910 MtrunA17_Chr4g0038271 24.116 481 295 18 99 540 102 551 1.44e-27 116
Msa0072910 MtrunA17_Chr4g0058231 22.961 466 289 13 105 537 58 486 1.54e-27 115
Msa0072910 MtrunA17_Chr1g0164321 23.516 455 304 12 118 544 110 548 2.42e-27 115
Msa0072910 MtrunA17_Chr4g0076161 26.096 479 311 14 60 522 20 471 3.20e-27 115
Msa0072910 MtrunA17_Chr8g0339331 23.894 452 302 14 104 536 70 498 7.63e-27 114
Msa0072910 MtrunA17_Chr5g0403321 25.261 479 322 17 74 537 31 488 9.25e-27 114
Msa0072910 MtrunA17_Chr7g0227291 24.719 445 279 16 118 540 75 485 9.48e-27 113
Msa0072910 MtrunA17_Chr1g0154731 23.356 441 276 14 101 524 83 478 1.13e-26 113
Msa0072910 MtrunA17_Chr6g0458561 31.771 192 128 3 347 536 321 511 1.22e-26 113
Msa0072910 MtrunA17_Chr5g0445451 26.709 468 298 14 84 536 48 485 1.39e-26 113
Msa0072910 MtrunA17_Chr5g0431671 26.588 425 279 12 105 522 71 469 2.08e-26 112
Msa0072910 MtrunA17_Chr5g0431511 25.055 455 298 10 84 522 43 470 2.47e-26 112
Msa0072910 MtrunA17_Chr6g0463801 23.926 489 320 15 62 531 22 477 2.48e-26 112
Msa0072910 MtrunA17_Chr4g0058191 25.383 457 282 15 105 537 55 476 2.50e-26 112
Msa0072910 MtrunA17_Chr3g0116741 26.711 453 285 17 104 537 80 504 3.69e-26 112
Msa0072910 MtrunA17_Chr7g0227281 24.717 441 284 17 118 540 75 485 3.84e-26 112
Msa0072910 MtrunA17_Chr3g0101731 24.249 466 309 14 73 522 32 469 4.17e-26 112
Msa0072910 MtrunA17_Chr5g0403331 26.247 461 284 16 99 533 62 492 4.76e-26 111
Msa0072910 MtrunA17_Chr4g0058211 34.536 194 109 5 354 537 19 204 6.89e-26 105
Msa0072910 MtrunA17_Chr4g0058201 24.066 482 302 15 76 532 27 469 7.01e-26 110
Msa0072910 MtrunA17_Chr5g0431641 25.951 447 297 11 84 522 48 468 8.89e-26 110
Msa0072910 MtrunA17_Chr1g0163351 24.385 447 291 14 120 539 77 503 1.42e-25 110
Msa0072910 MtrunA17_Chr8g0364081 25.380 461 308 15 82 525 76 517 1.98e-25 110
Msa0072910 MtrunA17_Chr6g0449341 24.545 440 297 15 107 528 120 542 2.01e-25 110
Msa0072910 MtrunA17_Chr1g0183611 24.880 418 260 14 133 523 9 399 2.49e-25 108
Msa0072910 MtrunA17_Chr1g0176831 23.413 504 342 14 36 522 19 495 2.50e-25 109
Msa0072910 MtrunA17_Chr2g0310381 25.442 452 289 15 91 525 44 464 2.91e-25 109
Msa0072910 MtrunA17_Chr4g0024771 24.834 451 297 11 104 540 69 491 3.29e-25 108
Msa0072910 MtrunA17_Chr3g0101661 25.106 470 309 16 69 522 30 472 3.69e-25 108
Msa0072910 MtrunA17_Chr3g0101651 24.540 489 316 15 72 536 33 492 3.89e-25 108
Msa0072910 MtrunA17_Chr5g0431501 23.747 459 299 13 84 522 43 470 4.62e-25 108
Msa0072910 MtrunA17_Chr5g0431461 23.747 459 299 13 84 522 43 470 4.62e-25 108
Msa0072910 MtrunA17_Chr5g0445421 24.413 426 268 9 104 522 143 521 4.93e-25 108
Msa0072910 MtrunA17_Chr7g0262111 26.802 444 266 16 97 524 80 480 6.01e-25 108
Msa0072910 MtrunA17_Chr1g0163391 24.885 434 275 16 118 528 76 481 7.07e-25 108
Msa0072910 MtrunA17_Chr2g0304871 25.439 456 316 11 96 542 62 502 1.13e-24 107
Msa0072910 MtrunA17_Chr6g0449381 23.990 421 266 16 118 513 79 470 1.26e-24 107
Msa0072910 MtrunA17_Chr4g0004481 24.545 440 282 15 120 540 75 483 1.79e-24 106
Msa0072910 MtrunA17_Chr6g0449331 23.380 432 290 11 120 528 81 494 1.92e-24 107
Msa0072910 MtrunA17_Chr1g0163491 24.146 439 294 14 118 537 91 509 2.04e-24 107
Msa0072910 MtrunA17_Chr6g0472311 30.769 260 148 8 295 537 261 505 2.49e-24 106
Msa0072910 MtrunA17_Chr2g0310391 24.554 448 298 13 91 525 44 464 2.52e-24 106
Msa0072910 MtrunA17_Chr5g0445531 27.438 441 266 16 99 522 64 467 2.98e-24 106
Msa0072910 MtrunA17_Chr4g0047691 25.287 435 282 13 104 525 81 485 3.22e-24 106
Msa0072910 MtrunA17_Chr4g0047631 26.087 437 276 14 104 525 78 482 3.42e-24 106
Msa0072910 MtrunA17_Chr8g0361471 24.946 465 311 14 72 522 29 469 4.38e-24 105
Msa0072910 MtrunA17_Chr4g0004601 25.056 443 280 16 96 522 98 504 4.39e-24 105
Msa0072910 MtrunA17_Chr1g0174481 23.926 489 332 17 59 530 13 478 4.55e-24 105
Msa0072910 MtrunA17_Chr4g0047641 28.102 274 176 7 276 537 240 504 6.51e-24 105
Msa0072910 MtrunA17_Chr4g0030701 24.667 450 303 16 104 536 64 494 6.61e-24 105
Msa0072910 MtrunA17_Chr7g0225531 23.310 429 290 13 115 527 84 489 7.08e-24 105
Msa0072910 MtrunA17_Chr3g0101701 24.846 487 309 18 76 536 37 492 7.59e-24 105
Msa0072910 MtrunA17_Chr6g0472221 22.374 438 290 12 102 524 99 501 1.38e-23 104
Msa0072910 MtrunA17_Chr7g0235261 24.717 441 287 12 94 522 76 483 1.50e-23 104
Msa0072910 MtrunA17_Chr6g0451641 23.956 455 296 14 104 531 70 501 1.76e-23 103
Msa0072910 MtrunA17_Chr2g0321171 25.641 429 278 13 118 535 86 484 1.81e-23 103
Msa0072910 MtrunA17_Chr1g0174471 23.874 444 304 12 101 530 76 499 1.82e-23 103
Msa0072910 MtrunA17_Chr1g0162811 24.194 434 278 12 106 522 69 468 1.83e-23 103
Msa0072910 MtrunA17_Chr6g0465511 24.731 465 312 13 72 522 29 469 2.06e-23 103
Msa0072910 MtrunA17_Chr3g0101621 25.105 474 302 19 67 522 21 459 2.29e-23 103
Msa0072910 MtrunA17_Chr8g0387001 23.326 433 292 12 121 536 83 492 2.74e-23 103
Msa0072910 MtrunA17_Chr8g0348751 24.490 441 290 15 121 540 83 501 3.08e-23 103
Msa0072910 MtrunA17_Chr6g0466331 25.161 465 310 14 72 522 29 469 3.22e-23 103
Msa0072910 MtrunA17_Chr4g0035921 25.227 440 282 13 105 522 67 481 5.54e-23 102
Msa0072910 MtrunA17_Chr8g0354541 34.884 172 108 4 370 540 1 169 5.81e-23 96.3
Msa0072910 MtrunA17_Chr6g0484811 26.027 438 280 16 104 525 66 475 6.01e-23 102
Msa0072910 MtrunA17_Chr6g0463791 24.781 456 292 16 104 540 67 490 7.74e-23 102
Msa0072910 MtrunA17_Chr3g0101631 24.635 479 308 19 63 522 20 464 8.00e-23 102
Msa0072910 MtrunA17_Chr5g0395321 25.059 427 276 13 106 522 73 465 8.51e-23 102
Msa0072910 MtrunA17_Chr1g0163211 22.646 446 289 15 103 523 61 475 1.16e-22 101
Msa0072910 MtrunA17_Chr3g0101581 24.370 476 315 16 68 527 28 474 1.36e-22 101
Msa0072910 MtrunA17_Chr3g0101601 24.123 456 305 15 78 522 40 465 1.48e-22 100
Msa0072910 MtrunA17_Chr8g0380501 26.353 425 253 18 118 517 71 460 1.58e-22 100
Msa0072910 MtrunA17_Chr3g0116681 25.000 488 323 15 67 537 30 491 1.59e-22 100
Msa0072910 MtrunA17_Chr7g0258211 23.491 464 287 15 104 536 68 494 1.95e-22 100
Msa0072910 MtrunA17_Chr1g0203141 21.477 447 292 14 97 524 84 490 2.04e-22 100
Msa0072910 MtrunA17_Chr2g0314721 23.125 480 317 14 70 529 37 484 2.41e-22 100
Msa0072910 MtrunA17_Chr1g0163281 21.581 468 307 15 102 540 74 510 2.53e-22 100
Msa0072910 MtrunA17_Chr5g0419691 24.675 462 294 14 84 525 39 466 2.54e-22 100
Msa0072910 MtrunA17_Chr5g0446101 30.093 216 137 6 327 531 81 293 2.99e-22 97.8
Msa0072910 MtrunA17_Chr3g0101611 25.159 473 302 18 71 523 32 472 3.20e-22 100
Msa0072910 MtrunA17_Chr4g0011901 25.435 460 285 17 106 540 61 487 4.35e-22 99.8
Msa0072910 MtrunA17_Chr8g0362701 24.537 432 279 15 105 516 65 469 4.89e-22 99.8
Msa0072910 MtrunA17_Chr5g0405001 25.917 436 282 15 105 525 74 483 7.33e-22 99.0
Msa0072910 MtrunA17_Chr4g0011981 26.022 465 276 16 106 540 61 487 8.34e-22 98.6
Msa0072910 MtrunA17_Chr3g0101721 24.736 473 301 16 72 522 32 471 8.81e-22 98.6
Msa0072910 MtrunA17_Chr1g0174441 22.603 438 309 9 105 530 86 505 8.90e-22 99.0
Msa0072910 MtrunA17_Chr6g0463621 30.769 195 126 6 354 540 1 194 9.33e-22 93.6
Msa0072910 MtrunA17_Chr1g0163421 23.765 425 286 14 118 523 109 514 1.14e-21 98.6
Msa0072910 MtrunA17_Chr1g0171041 23.529 425 285 14 120 523 76 481 1.69e-21 97.8
Msa0072910 MtrunA17_Chr5g0419451 25.058 431 264 15 112 523 97 487 2.48e-21 97.4
Msa0072910 MtrunA17_Chr6g0449351 23.832 428 275 15 118 523 39 437 2.65e-21 97.1
Msa0072910 MtrunA17_Chr4g0011921 25.738 474 288 18 95 540 50 487 2.70e-21 97.1
Msa0072910 MtrunA17_Chr4g0011851 33.143 175 113 4 352 525 14 185 2.78e-21 92.4
Msa0072910 MtrunA17_Chr6g0451751 23.624 436 290 12 104 516 72 487 2.90e-21 97.4
Msa0072910 MtrunA17_Chr8g0382901 24.711 433 276 14 99 522 52 443 3.04e-21 98.2
Msa0072910 MtrunA17_Chr8g0382901 24.385 447 265 17 104 522 521 922 3.95e-20 94.7
Msa0072910 MtrunA17_Chr1g0174461 22.889 450 315 13 105 543 66 494 3.13e-21 97.1
Msa0072910 MtrunA17_Chr6g0449361 23.239 426 280 13 118 523 79 477 3.47e-21 97.1
Msa0072910 MtrunA17_Chr7g0254641 23.667 469 310 15 68 512 28 472 3.95e-21 96.7
Msa0072910 MtrunA17_Chr5g0431591 28.679 265 171 5 265 522 33 286 4.28e-21 94.4
Msa0072910 MtrunA17_Chr3g0101671 25.163 461 307 16 76 522 37 473 4.51e-21 96.7
Msa0072910 MtrunA17_Chr4g0011871 24.520 469 287 16 84 525 39 467 4.80e-21 96.3
Msa0072910 MtrunA17_Chr1g0203151 21.348 445 295 13 97 524 80 486 5.19e-21 96.3
Msa0072910 MtrunA17_Chr4g0011961 22.532 466 308 12 97 540 52 486 5.39e-21 96.3
Msa0072910 MtrunA17_Chr6g0451681 30.102 196 136 1 347 541 270 465 6.15e-21 95.9
Msa0072910 MtrunA17_Chr2g0280261 26.230 488 314 17 70 540 27 485 7.08e-21 95.9
Msa0072910 MtrunA17_Chr1g0163451 23.516 438 304 15 103 523 75 498 7.16e-21 95.9
Msa0072910 MtrunA17_Chr4g0056951 25.000 424 264 15 106 509 75 464 7.17e-21 95.9
Msa0072910 MtrunA17_Chr7g0235551 23.326 433 297 11 99 516 58 470 7.44e-21 95.9
Msa0072910 MtrunA17_Chr1g0163501 23.799 437 289 18 119 536 75 486 8.37e-21 95.9
Msa0072910 MtrunA17_Chr3g0128461 24.124 485 305 19 57 524 61 499 8.43e-21 95.9
Msa0072910 MtrunA17_Chr5g0429651 23.788 433 279 12 108 517 73 477 9.56e-21 95.5
Msa0072910 MtrunA17_Chr5g0402981 31.351 185 113 5 366 543 4 181 9.66e-21 90.5
Msa0072910 MtrunA17_Chr1g0210091 23.628 419 273 15 106 504 97 488 1.02e-20 95.5
Msa0072910 MtrunA17_Chr6g0451741 23.476 443 285 10 104 516 91 509 1.20e-20 95.5
Msa0072910 MtrunA17_Chr5g0403451 29.204 226 128 4 333 528 35 258 1.28e-20 92.0
Msa0072910 MtrunA17_Chr4g0058261 23.502 434 290 12 105 522 92 499 1.32e-20 95.1
Msa0072910 MtrunA17_Chr4g0008101 24.318 440 284 11 104 516 70 487 1.56e-20 95.1
Msa0072910 MtrunA17_Chr4g0052861 31.492 181 116 2 352 531 297 470 1.63e-20 94.7
Msa0072910 MtrunA17_Chr1g0164211 32.203 177 109 5 352 523 293 463 1.65e-20 94.7
Msa0072910 MtrunA17_Chr1g0174451 23.820 445 299 12 106 534 68 488 1.74e-20 94.7
Msa0072910 MtrunA17_Chr8g0380471 28.400 250 154 6 288 528 224 457 2.46e-20 94.0
Msa0072910 MtrunA17_Chr8g0356001 24.750 501 307 17 57 528 21 480 2.65e-20 94.4
Msa0072910 MtrunA17_Chr4g0047661 23.400 453 304 12 104 537 77 505 2.74e-20 94.4
Msa0072910 MtrunA17_Chr1g0205361 23.908 435 293 13 99 522 58 465 2.92e-20 94.0
Msa0072910 MtrunA17_Chr7g0246121 23.095 433 292 14 104 523 63 467 3.59e-20 94.0
Msa0072910 MtrunA17_Chr5g0432751 23.918 439 298 14 99 524 58 473 3.78e-20 93.6
Msa0072910 MtrunA17_Chr4g0057001 22.402 433 291 13 106 522 81 484 4.07e-20 93.6
Msa0072910 MtrunA17_Chr2g0310351 29.534 193 128 4 354 540 1 191 5.67e-20 88.2
Msa0072910 MtrunA17_Chr5g0406651 25.758 462 284 17 84 522 40 465 6.53e-20 92.8
Msa0072910 MtrunA17_Chr6g0451781 25.400 437 293 15 104 523 105 525 7.19e-20 93.2
Msa0072910 MtrunA17_Chr3g0082701 24.145 468 303 14 104 543 70 513 7.39e-20 92.8
Msa0072910 MtrunA17_Chr8g0390871 30.457 197 127 6 328 522 6 194 7.44e-20 89.0
Msa0072910 MtrunA17_Chr7g0255531 25.114 438 277 15 101 518 54 460 7.57e-20 92.8
Msa0072910 MtrunA17_Chr2g0314731 21.605 486 332 14 53 522 13 465 8.98e-20 92.4
Msa0072910 MtrunA17_Chr1g0163461 22.819 447 288 15 107 523 74 493 9.26e-20 92.4
Msa0072910 MtrunA17_Chr7g0218611 21.862 494 319 18 61 531 24 473 1.03e-19 92.4
Msa0072910 MtrunA17_Chr1g0162801 24.161 447 298 13 106 536 69 490 1.09e-19 92.4
Msa0072910 MtrunA17_Chr4g0039901 22.738 409 271 13 106 499 66 444 2.39e-19 91.3
Msa0072910 MtrunA17_Chr4g0026941 24.828 435 283 13 121 535 115 525 2.42e-19 91.3
Msa0072910 MtrunA17_Chr6g0484841 22.197 437 288 12 106 522 68 472 2.48e-19 91.3
Msa0072910 MtrunA17_Chr4g0020041 27.341 267 178 9 264 522 212 470 2.49e-19 91.3
Msa0072910 MtrunA17_Chr5g0430091 24.480 433 285 14 105 522 67 472 2.51e-19 91.3
Msa0072910 MtrunA17_Chr5g0430131 30.055 183 124 4 342 522 291 471 3.10e-19 90.9
Msa0072910 MtrunA17_Chr6g0479681 21.258 461 292 14 97 524 82 504 3.17e-19 90.9
Msa0072910 MtrunA17_Chr8g0372251 23.445 418 269 13 105 501 65 452 3.45e-19 90.9
Msa0072910 MtrunA17_Chr3g0101811 23.265 490 320 16 63 522 21 484 3.55e-19 90.9
Msa0072910 MtrunA17_Chr2g0334021 28.017 232 157 5 308 537 263 486 4.33e-19 90.5
Msa0072910 MtrunA17_Chr8g0339311 29.412 187 130 2 352 536 320 506 4.49e-19 90.5
Msa0072910 MtrunA17_Chr6g0451811 29.381 194 134 2 351 543 2 193 4.53e-19 85.9
Msa0072910 MtrunA17_Chr3g0086691 22.624 442 287 11 106 522 63 474 6.54e-19 90.1
Msa0072910 MtrunA17_Chr5g0430101 31.609 174 115 4 351 522 298 469 6.69e-19 89.7
Msa0072910 MtrunA17_Chr4g0046681 29.016 193 134 2 332 523 9 199 6.85e-19 86.3
Msa0072910 MtrunA17_Chr8g0388921 26.400 250 159 6 288 528 225 458 7.56e-19 89.7
Msa0072910 MtrunA17_Chr8g0362731 24.802 379 250 10 150 522 32 381 7.57e-19 89.0
Msa0072910 MtrunA17_Chr5g0395331 23.502 434 292 12 106 525 68 475 7.83e-19 89.7
Msa0072910 MtrunA17_Chr7g0258221 23.044 473 331 12 59 516 14 468 8.17e-19 89.7
Msa0072910 MtrunA17_Chr4g0011881 24.524 473 316 14 84 540 40 487 8.21e-19 89.7
Msa0072910 MtrunA17_Chr4g0011941 31.443 194 123 5 354 540 1 191 8.46e-19 85.1
Msa0072910 MtrunA17_Chr3g0101591 34.286 175 109 6 355 527 40 210 1.12e-18 85.5
Msa0072910 MtrunA17_Chr1g0167321 26.269 453 281 19 106 536 66 487 1.20e-18 89.0
Msa0072910 MtrunA17_Chr6g0466901 29.064 203 140 2 343 543 305 505 1.22e-18 89.0
Msa0072910 MtrunA17_Chr3g0086661 24.664 446 287 14 106 529 63 481 1.25e-18 89.0
Msa0072910 MtrunA17_Chr5g0430081 30.601 183 123 4 342 522 290 470 1.28e-18 89.0
Msa0072910 MtrunA17_Chr1g0160851 23.963 434 294 11 99 522 58 465 1.35e-18 89.0
Msa0072910 MtrunA17_Chr4g0039391 22.511 462 292 14 99 533 59 481 1.40e-18 89.0
Msa0072910 MtrunA17_Chr7g0224561 22.458 472 319 10 90 542 47 490 1.75e-18 88.6
Msa0072910 MtrunA17_Chr1g0178971 23.833 407 270 13 127 522 104 481 2.46e-18 88.2
Msa0072910 MtrunA17_Chr5g0401681 23.556 450 290 13 105 536 62 475 2.77e-18 87.8
Msa0072910 MtrunA17_Chr3g0104351 24.368 435 276 15 108 517 79 485 3.20e-18 87.8
Msa0072910 MtrunA17_Chr8g0344151 24.276 449 299 13 89 522 50 472 3.54e-18 87.8
Msa0072910 MtrunA17_Chr2g0293411 26.840 231 129 6 298 522 263 459 4.13e-18 87.4
Msa0072910 MtrunA17_Chr6g0466941 26.250 240 167 3 312 543 269 506 4.23e-18 87.4
Msa0072910 MtrunA17_Chr8g0390881 35.366 164 99 6 352 513 303 461 4.80e-18 87.4
Msa0072910 MtrunA17_Chr2g0293421 29.282 181 109 5 349 522 292 460 5.32e-18 87.0
Msa0072910 MtrunA17_Chr1g0163511 23.529 459 290 20 105 528 66 498 5.34e-18 87.0
Msa0072910 MtrunA17_Chr1g0174431 31.429 175 113 3 354 522 1 174 5.51e-18 82.8
Msa0072910 MtrunA17_Chr5g0395381 24.885 434 249 15 106 525 73 443 9.88e-18 85.9
Msa0072910 MtrunA17_Chr4g0061381 23.394 436 291 11 105 522 61 471 9.96e-18 86.3
Msa0072910 MtrunA17_Chr7g0218601 21.364 440 299 14 106 531 66 472 1.10e-17 85.9
Msa0072910 MtrunA17_Chr3g0101801 24.390 492 312 20 76 540 41 499 1.18e-17 85.9
Msa0072910 MtrunA17_Chr4g0030711 20.495 444 326 13 106 536 68 497 1.48e-17 85.9
Msa0072910 MtrunA17_Chr8g0344181 23.894 452 303 12 89 525 52 477 1.78e-17 85.5
Msa0072910 MtrunA17_Chr1g0197891 22.171 433 287 13 106 522 65 463 1.86e-17 85.1
Msa0072910 MtrunA17_Chr4g0046321 22.321 448 291 12 99 522 60 474 2.41e-17 85.1
Msa0072910 MtrunA17_Chr4g0053621 27.128 188 129 2 347 533 296 476 2.57e-17 85.1
Msa0072910 MtrunA17_Chr8g0346261 29.536 237 158 5 293 524 283 515 2.68e-17 85.1
Msa0072910 MtrunA17_Chr1g0197881 22.402 433 286 13 106 522 64 462 2.75e-17 84.7
Msa0072910 MtrunA17_Chr2g0296661 23.094 446 300 10 106 536 63 480 3.43e-17 84.7
Msa0072910 MtrunA17_Chr5g0401691 23.129 441 295 13 105 533 81 489 3.45e-17 84.7
Msa0072910 MtrunA17_Chr1g0197851 22.402 433 286 13 106 522 65 463 3.56e-17 84.3
Msa0072910 MtrunA17_Chr3g0101741 26.639 244 159 7 293 525 159 393 3.76e-17 84.0
Msa0072910 MtrunA17_Chr3g0084921 23.516 438 300 14 106 527 66 484 3.86e-17 84.3
Msa0072910 MtrunA17_Chr8g0344191 23.025 443 287 12 105 525 99 509 3.92e-17 84.7
Msa0072910 MtrunA17_Chr4g0076171 33.146 178 88 6 373 540 4 160 4.19e-17 79.3
Msa0072910 MtrunA17_Chr6g0451691 22.883 437 296 12 104 516 72 491 4.38e-17 84.3
Msa0072910 MtrunA17_Chr5g0445351 35.172 145 89 5 381 523 51 192 4.71e-17 80.1
Msa0072910 MtrunA17_Chr5g0430071 30.460 174 117 3 351 522 154 325 4.72e-17 83.2
Msa0072910 MtrunA17_Chr8g0369791 29.524 210 128 6 335 533 249 449 6.14e-17 83.6
Msa0072910 MtrunA17_Chr1g0197871 28.452 239 156 7 291 525 239 466 6.60e-17 83.6
Msa0072910 MtrunA17_Chr4g0052881 24.198 343 233 7 191 530 152 470 7.34e-17 83.6
Msa0072910 MtrunA17_Chr3g0094231 27.397 219 144 5 327 531 268 485 8.22e-17 83.2
Msa0072910 MtrunA17_Chr7g0214931 22.222 351 235 7 121 453 103 433 1.02e-16 82.8
Msa0072910 MtrunA17_Chr5g0430031 27.586 203 138 6 342 537 292 492 1.06e-16 83.2
Msa0072910 MtrunA17_Chr3g0086651 23.991 446 290 14 106 529 63 481 1.11e-16 83.2
Msa0072910 MtrunA17_Chr4g0046351 27.459 244 164 7 300 533 244 484 1.11e-16 83.2
Msa0072910 MtrunA17_Chr5g0443401 25.311 241 162 7 297 530 231 460 1.36e-16 82.4
Msa0072910 MtrunA17_Chr5g0403931 26.761 213 137 6 325 527 256 459 1.41e-16 82.4
Msa0072910 MtrunA17_Chr5g0443731 22.248 436 290 12 101 527 56 451 1.82e-16 82.0
Msa0072910 MtrunA17_Chr6g0451771 30.000 180 125 1 353 531 21 200 1.95e-16 79.0
Msa0072910 MtrunA17_Chr8g0351801 25.962 208 141 5 341 536 297 503 2.09e-16 82.0
Msa0072910 MtrunA17_Chr1g0164351 24.348 345 206 12 118 436 110 425 2.20e-16 81.6
Msa0072910 MtrunA17_Chr1g0163371 28.646 192 112 5 347 523 15 196 2.75e-16 78.2
Msa0072910 MtrunA17_Chr7g0224551 21.875 448 313 9 90 523 47 471 3.77e-16 81.3
Msa0072910 MtrunA17_Chr8g0362481 23.904 251 175 7 296 536 176 420 3.90e-16 80.9
Msa0072910 MtrunA17_Chr3g0094171 28.293 205 138 6 340 537 293 495 4.02e-16 81.3
Msa0072910 MtrunA17_Chr4g0046331 27.542 236 155 7 300 522 244 476 4.75e-16 80.9
Msa0072910 MtrunA17_Chr7g0265611 27.350 234 162 3 298 528 261 489 5.22e-16 80.9
Msa0072910 MtrunA17_Chr3g0113321 28.502 207 138 4 316 518 235 435 5.29e-16 80.9
Msa0072910 MtrunA17_Chr7g0260821 21.362 426 287 15 120 529 86 479 6.52e-16 80.5
Msa0072910 MtrunA17_Chr3g0101831 25.052 483 309 18 60 522 21 470 8.44e-16 80.1
Msa0072910 MtrunA17_Chr3g0101751 22.622 473 329 13 78 536 46 495 1.07e-15 80.1
Msa0072910 MtrunA17_Chr1g0204241 30.500 200 118 7 337 527 86 273 1.31e-15 77.8
Msa0072910 MtrunA17_Chr1g0156101 22.426 437 312 11 99 522 57 479 1.62e-15 79.3
Msa0072910 MtrunA17_Chr2g0296651 25.521 192 135 2 351 541 296 480 1.73e-15 79.3
Msa0072910 MtrunA17_Chr3g0101821 22.845 464 313 14 76 522 34 469 2.37e-15 79.0
Msa0072910 MtrunA17_Chr8g0355961 23.838 495 307 17 63 528 27 480 2.49e-15 78.6
Msa0072910 MtrunA17_Chr5g0445761 32.164 171 111 5 354 522 1 168 2.74e-15 75.1
Msa0072910 MtrunA17_Chr7g0246151 23.148 432 291 15 104 521 63 467 3.36e-15 78.2
Msa0072910 MtrunA17_Chr3g0107541 22.353 425 298 9 115 525 93 499 3.40e-15 78.6
Msa0072910 MtrunA17_Chr3g0101761 22.661 481 326 16 76 536 34 488 5.83e-15 77.4
Msa0072910 MtrunA17_Chr1g0200961 23.598 428 295 13 106 522 59 465 1.05e-14 76.6
Msa0072910 MtrunA17_Chr4g0017411 22.646 446 286 13 105 535 61 462 1.48e-14 76.3
Msa0072910 MtrunA17_Chr4g0046631 22.958 453 304 14 90 523 61 487 3.13e-14 75.5
Msa0072910 MtrunA17_Chr8g0377341 24.769 432 270 16 112 526 106 499 3.22e-14 75.5
Msa0072910 MtrunA17_Chr5g0408181 27.602 221 138 6 298 511 221 426 3.26e-14 75.1
Msa0072910 MtrunA17_Chr1g0198191 22.096 439 294 13 105 524 78 487 3.31e-14 75.1
Msa0072910 MtrunA17_Chr1g0213671 24.070 457 293 12 105 536 65 492 3.42e-14 75.1
Msa0072910 MtrunA17_Chr1g0207841 26.738 187 134 3 351 536 312 496 3.65e-14 75.1
Msa0072910 MtrunA17_Chr3g0107511 24.664 223 151 6 317 528 242 458 3.85e-14 75.1
Msa0072910 MtrunA17_Chr5g0430151 32.624 141 91 4 384 522 5 143 5.42e-14 70.5
Msa0072910 MtrunA17_Chr1g0160861 26.749 243 165 6 284 522 73 306 7.89e-14 72.8
Msa0072910 MtrunA17_Chr1g0205371 23.601 411 272 11 106 503 66 447 8.44e-14 73.9
Msa0072910 MtrunA17_Chr7g0248981 56.364 55 23 1 486 539 16 70 1.06e-13 67.8
Msa0072910 MtrunA17_Chr3g0117301 35.185 108 67 2 409 515 5 110 1.64e-13 67.4
Msa0072910 MtrunA17_Chr3g0105761 27.273 176 116 4 355 524 1 170 2.27e-13 69.3
Msa0072910 MtrunA17_Chr1g0164371 29.167 168 106 5 341 503 272 431 3.99e-13 71.6
Msa0072910 MtrunA17_Chr5g0430111 31.061 132 89 2 342 471 292 423 4.07e-13 71.6
Msa0072910 MtrunA17_Chr4g0052851 27.778 180 122 3 353 531 289 461 6.19e-13 71.2
Msa0072910 MtrunA17_Chr3g0116731 26.154 130 89 2 409 537 5 128 6.74e-13 66.2
Msa0072910 MtrunA17_Chr2g0314781 28.947 152 103 4 373 522 4 152 8.67e-13 66.6
Msa0072910 MtrunA17_Chr8g0370641 20.553 506 324 18 62 526 25 493 1.16e-12 70.5
Msa0072910 MtrunA17_Chr5g0400421 26.776 183 121 4 349 525 293 468 1.22e-12 70.1
Msa0072910 MtrunA17_Chr4g0046661 29.016 193 134 2 352 543 23 213 1.27e-12 67.8
Msa0072910 MtrunA17_Chr8g0357421 23.207 474 305 14 72 522 32 469 2.13e-12 69.7
Msa0072910 MtrunA17_Chr8g0357431 21.842 467 321 12 72 522 32 470 2.33e-12 69.3
Msa0072910 MtrunA17_Chr3g0141801 26.860 242 137 12 297 521 236 454 7.98e-12 67.8
Msa0072910 MtrunA17_Chr8g0370651 21.030 466 300 17 98 527 65 498 1.09e-11 67.4
Msa0072910 MtrunA17_Chr5g0423621 30.636 173 102 8 378 540 9 173 1.30e-11 63.5
Msa0072910 MtrunA17_Chr1g0184471 23.662 355 216 14 120 464 81 390 3.32e-11 65.5
Msa0072910 MtrunA17_Chr8g0387101 25.000 236 169 2 296 523 242 477 9.47e-11 64.3
Msa0072910 MtrunA17_Chr1g0153371 25.322 233 155 7 301 526 227 447 9.66e-11 64.3
Msa0072910 MtrunA17_Chr3g0107551 25.287 174 128 2 354 525 5 178 9.87e-11 61.6
Query id Subject id identity % alignment length mismatches gap openings q. start q. end s. start s. end e-value bit score
Msa0072910 AT3G53130.1 78.698 507 88 2 34 540 44 530 0.0 842
Msa0072910 AT1G31800.1 50.211 474 216 7 68 539 104 559 7.62e-156 458
Msa0072910 AT4G15110.1 43.750 496 228 11 87 544 91 573 1.57e-130 393
Msa0072910 AT3G14630.1 29.705 441 268 13 94 524 75 483 8.42e-41 154
Msa0072910 AT3G14630.2 29.705 441 268 13 94 524 130 538 1.05e-40 155
Msa0072910 AT2G26710.1 29.792 433 261 16 102 524 91 490 3.24e-39 150
Msa0072910 AT2G44890.1 27.376 442 273 12 108 527 69 484 5.52e-39 149
Msa0072910 AT3G14620.1 27.602 442 282 14 103 537 93 503 1.14e-37 145
Msa0072910 AT2G45510.1 26.651 439 280 10 108 527 69 484 2.20e-36 142
Msa0072910 AT3G14610.1 28.043 460 279 15 80 524 65 487 5.99e-36 141
Msa0072910 AT3G14680.1 28.193 415 265 13 115 524 101 487 1.04e-35 140
Msa0072910 AT3G14690.1 27.473 455 276 13 97 537 86 500 4.15e-34 135
Msa0072910 AT3G14690.2 27.394 449 284 12 97 537 121 535 5.41e-34 135
Msa0072910 AT2G44890.2 26.244 442 260 12 108 527 69 466 2.06e-33 133
Msa0072910 AT1G57750.1 25.776 419 282 11 118 528 78 475 4.62e-33 132
Msa0072910 AT5G52320.2 26.044 407 272 13 118 513 79 467 1.31e-32 131
Msa0072910 AT4G39490.1 26.116 448 282 12 118 537 78 504 1.31e-32 131
Msa0072910 AT5G52320.1 26.044 407 272 13 118 513 79 467 1.44e-32 131
Msa0072910 AT3G14640.1 27.938 451 278 15 100 537 86 502 1.95e-32 130
Msa0072910 AT3G14640.2 27.938 451 278 15 100 537 108 524 3.02e-32 130
Msa0072910 AT3G14660.1 25.893 448 283 11 103 537 89 500 1.40e-31 128
Msa0072910 AT1G65340.1 24.700 417 285 10 118 523 79 477 2.09e-31 127
Msa0072910 AT2G46960.2 25.167 449 259 13 101 520 87 487 2.67e-31 127
Msa0072910 AT5G38450.1 29.333 450 284 16 80 522 67 489 2.77e-31 127
Msa0072910 AT1G24540.1 24.661 442 292 12 120 540 90 511 9.64e-31 126
Msa0072910 AT2G23180.1 25.314 478 300 15 85 537 55 500 1.37e-30 125
Msa0072910 AT3G14650.1 27.570 428 267 12 120 537 106 500 1.62e-30 125
Msa0072910 AT2G21910.1 24.368 435 297 12 118 537 77 494 5.37e-30 124
Msa0072910 AT1G75130.1 26.606 436 267 13 101 524 84 478 7.98e-30 123
Msa0072910 AT4G27710.1 24.729 461 289 14 84 525 72 493 2.00e-29 122
Msa0072910 AT4G39480.1 24.615 455 283 12 115 537 75 501 5.98e-29 120
Msa0072910 AT4G39500.1 25.909 440 293 15 107 533 31 450 6.45e-29 120
Msa0072910 AT3G48310.1 26.392 485 306 17 71 537 26 477 8.38e-29 120
Msa0072910 AT4G32170.1 25.057 435 283 15 115 528 70 482 1.08e-28 120
Msa0072910 AT4G39500.2 25.909 440 293 15 107 533 81 500 1.11e-28 120
Msa0072910 AT3G25180.1 25.600 500 307 15 63 533 25 488 1.63e-28 119
Msa0072910 AT5G52400.1 25.566 442 277 15 97 524 91 494 2.35e-28 119
Msa0072910 AT1G47620.1 27.103 428 282 15 124 537 92 503 5.23e-28 118
Msa0072910 AT5G57260.1 26.477 457 296 15 99 537 54 488 1.27e-27 116
Msa0072910 AT5G23190.1 23.043 447 297 11 118 540 108 531 1.50e-27 117
Msa0072910 AT1G69500.1 24.758 517 319 16 52 526 12 500 2.38e-27 116
Msa0072910 AT3G56630.1 26.218 431 263 16 115 522 72 470 3.06e-27 115
Msa0072910 AT1G34540.1 24.706 425 277 13 115 522 72 470 3.12e-27 115
Msa0072910 AT3G14660.2 35.533 197 123 4 342 537 161 354 3.39e-27 113
Msa0072910 AT5G02900.1 25.476 420 258 15 124 526 74 455 4.16e-26 112
Msa0072910 AT3G26300.1 24.561 456 308 13 99 540 55 488 5.88e-26 111
Msa0072910 AT5G25140.1 25.546 458 296 15 69 509 21 450 8.41e-26 111
Msa0072910 AT2G46950.1 25.285 439 282 14 99 525 142 546 1.02e-25 111
Msa0072910 AT1G67110.1 27.083 432 266 14 102 522 90 483 1.04e-25 111
Msa0072910 AT1G57750.2 26.064 376 247 10 118 481 78 434 1.79e-25 109
Msa0072910 AT3G26310.1 23.427 461 307 14 99 540 54 487 1.90e-25 110
Msa0072910 AT3G48520.1 25.352 426 272 15 115 524 77 472 2.19e-25 110
Msa0072910 AT4G39510.1 24.480 433 292 14 124 540 83 496 2.42e-25 110
Msa0072910 AT5G24900.1 23.077 442 305 13 94 524 85 502 3.25e-25 109
Msa0072910 AT2G46960.1 24.318 403 230 11 145 520 17 371 4.25e-25 107
Msa0072910 AT5G24910.1 24.777 448 291 14 94 524 89 507 8.06e-25 108
Msa0072910 AT5G63450.1 22.611 429 283 13 117 527 81 478 1.56e-24 107
Msa0072910 AT3G48320.1 26.186 485 307 16 71 537 26 477 1.67e-24 107
Msa0072910 AT5G63450.2 23.095 433 276 14 117 527 139 536 2.37e-24 107
Msa0072910 AT5G25120.1 25.159 473 301 15 70 522 22 461 2.88e-24 106
Msa0072910 AT4G12320.1 25.112 446 289 13 101 528 68 486 3.23e-24 106
Msa0072910 AT4G31970.1 31.839 223 140 5 325 536 282 503 5.20e-24 106
Msa0072910 AT4G37400.1 28.511 235 166 2 298 531 236 469 6.37e-24 105
Msa0072910 AT1G13140.1 22.844 429 291 12 121 528 94 503 7.31e-24 105
Msa0072910 AT3G48290.1 25.615 488 308 18 70 537 26 478 1.04e-23 104
Msa0072910 AT4G37430.1 23.956 455 290 17 99 531 52 472 2.58e-23 103
Msa0072910 AT4G31950.1 31.390 223 141 5 325 536 271 492 3.21e-23 103
Msa0072910 AT1G13140.2 21.986 423 276 11 121 528 94 477 3.69e-23 103
Msa0072910 AT3G26320.1 24.099 444 284 15 99 522 55 465 4.54e-23 103
Msa0072910 AT1G13150.1 24.661 442 269 15 121 529 87 497 4.66e-23 103
Msa0072910 AT2G45560.1 24.169 451 305 11 106 540 69 498 6.12e-23 102
Msa0072910 AT5G08250.1 22.695 423 280 14 118 517 47 445 6.58e-23 102
Msa0072910 AT4G31940.1 30.942 223 142 5 325 536 283 504 1.04e-22 102
Msa0072910 AT5G08250.2 22.695 423 280 14 118 517 109 507 1.10e-22 102
Msa0072910 AT2G45970.1 24.396 414 279 10 121 517 83 479 1.37e-22 102
Msa0072910 AT2G45550.1 24.834 451 302 11 106 540 69 498 1.49e-22 101
Msa0072910 AT3G01900.1 23.503 451 282 14 109 537 69 478 1.66e-22 101
Msa0072910 AT2G25160.1 24.494 445 298 12 106 531 67 492 1.94e-22 101
Msa0072910 AT4G12310.1 23.649 444 298 12 101 528 70 488 1.98e-22 101
Msa0072910 AT3G26330.1 23.394 436 285 14 105 522 61 465 4.78e-22 100
Msa0072910 AT2G45580.1 24.945 453 294 14 106 537 69 496 5.61e-22 99.8
Msa0072910 AT4G37410.1 24.890 454 275 16 104 533 60 471 8.35e-22 99.4
Msa0072910 AT5G57220.1 24.390 451 278 16 101 531 56 463 8.87e-22 99.0
Msa0072910 AT1G01600.1 25.111 450 279 16 121 540 83 504 9.55e-22 99.4
Msa0072910 AT5G24950.1 25.747 435 276 15 104 522 61 464 1.02e-21 99.0
Msa0072910 AT3G26280.1 24.348 460 308 14 71 514 26 461 1.55e-21 98.6
Msa0072910 AT3G26280.2 24.512 461 306 15 71 514 43 478 1.66e-21 98.6
Msa0072910 AT3G26230.1 24.524 473 311 14 71 522 20 467 1.69e-21 98.2
Msa0072910 AT4G13770.1 25.602 457 298 16 102 540 58 490 2.33e-21 97.8
Msa0072910 AT1G66540.2 26.033 242 169 4 296 536 69 301 2.44e-21 95.5
Msa0072910 AT4G31500.1 24.017 458 304 15 99 537 54 486 2.56e-21 97.8
Msa0072910 AT3G48270.1 23.947 451 292 16 104 537 60 476 2.70e-21 97.4
Msa0072910 AT3G48280.1 24.612 451 286 18 106 537 61 476 2.81e-21 97.4
Msa0072910 AT4G37360.1 28.934 197 132 2 347 542 290 479 4.13e-21 97.1
Msa0072910 AT5G24900.2 23.238 383 263 11 150 524 26 385 5.45e-21 95.9
Msa0072910 AT1G66540.1 26.033 242 169 4 296 536 128 360 6.51e-21 95.5
Msa0072910 AT4G37340.1 29.630 189 125 2 347 534 290 471 6.94e-21 96.3
Msa0072910 AT3G26125.1 22.973 444 276 13 121 527 94 508 1.09e-20 95.9
Msa0072910 AT5G25180.1 24.116 481 308 12 70 528 22 467 1.48e-20 95.5
Msa0072910 AT3G26270.1 24.033 491 319 15 71 536 26 487 1.50e-20 95.5
Msa0072910 AT5G58860.1 24.775 444 284 16 119 540 84 499 1.82e-20 95.1
Msa0072910 AT1G63710.1 23.005 426 293 13 108 517 70 476 2.04e-20 95.1
Msa0072910 AT1G01280.1 23.380 432 282 14 104 512 61 466 3.15e-20 94.4
Msa0072910 AT1G50560.1 27.751 209 145 4 341 544 299 506 3.93e-20 94.4
Msa0072910 AT5G25130.1 24.359 468 309 14 71 522 23 461 4.71e-20 94.0
Msa0072910 AT3G20950.1 22.062 485 324 13 76 538 48 500 9.62e-20 93.2
Msa0072910 AT3G48290.2 25.049 515 303 19 70 537 26 504 1.12e-19 92.8
Msa0072910 AT2G45580.2 30.415 217 136 6 330 537 132 342 1.28e-19 91.3
Msa0072910 AT3G28740.1 29.630 189 125 2 343 530 294 475 1.52e-19 92.4
Msa0072910 AT3G48300.1 23.884 448 290 16 104 536 58 469 1.54e-19 92.0
Msa0072910 AT3G48300.2 23.884 448 290 16 104 536 60 471 1.56e-19 92.0
Msa0072910 AT4G12300.1 23.256 430 294 10 106 522 73 479 1.78e-19 92.0
Msa0072910 AT1G33720.1 22.247 454 310 12 106 540 69 498 2.28e-19 91.7
Msa0072910 AT1G74110.1 23.767 446 309 12 112 544 104 531 2.77e-19 91.7
Msa0072910 AT4G00360.1 23.918 439 296 14 121 540 83 502 3.71e-19 91.3
Msa0072910 AT4G13290.1 24.942 429 276 15 106 522 64 458 4.06e-19 90.9
Msa0072910 AT4G15360.1 25.524 286 201 7 270 545 218 501 4.18e-19 90.9
Msa0072910 AT5G25900.1 26.582 237 157 3 286 522 260 479 7.42e-19 90.1
Msa0072910 AT3G26160.1 25.734 443 285 17 76 499 29 446 1.40e-18 89.4
Msa0072910 AT2G40890.1 25.000 456 281 13 96 527 48 466 1.43e-18 89.4
Msa0072910 AT1G13100.1 23.371 445 282 13 104 522 54 465 1.53e-18 89.0
Msa0072910 AT3G26210.1 23.832 428 276 16 106 514 62 458 1.66e-18 89.0
Msa0072910 AT1G33730.1 28.436 211 142 4 341 544 159 367 1.79e-18 87.8
Msa0072910 AT1G33730.2 28.436 211 142 4 341 544 159 367 1.79e-18 87.8
Msa0072910 AT2G42250.1 23.923 209 151 3 341 542 294 501 2.02e-18 89.0
Msa0072910 AT5G35715.1 25.837 418 271 14 120 522 11 404 2.15e-18 88.2
Msa0072910 AT1G33720.4 26.778 239 163 7 310 540 132 366 3.01e-18 87.0
Msa0072910 AT1G33720.3 26.778 239 163 7 310 540 132 366 3.01e-18 87.0
Msa0072910 AT1G33720.5 26.778 239 163 7 310 540 132 366 3.01e-18 87.0
Msa0072910 AT3G20935.1 29.843 191 128 4 351 536 131 320 3.44e-18 86.7
Msa0072910 AT1G13710.1 25.701 428 278 16 108 523 84 483 3.91e-18 87.8
Msa0072910 AT4G37320.1 21.719 442 300 9 107 536 66 473 4.00e-18 87.8
Msa0072910 AT3G61040.1 29.730 222 143 7 325 537 267 484 4.01e-18 87.8
Msa0072910 AT4G37370.1 23.377 462 288 16 96 536 55 471 6.08e-18 87.4
Msa0072910 AT5G44620.1 21.882 425 307 10 105 522 76 482 7.09e-18 87.0
Msa0072910 AT1G74550.1 23.831 449 283 15 101 531 53 460 8.19e-18 86.7
Msa0072910 AT3G20140.1 21.847 444 292 14 99 522 67 475 8.20e-18 87.0
Msa0072910 AT2G24180.1 28.426 197 138 3 342 537 292 486 1.02e-17 86.7
Msa0072910 AT1G13080.1 23.711 485 318 13 67 529 21 475 1.22e-17 86.3
Msa0072910 AT1G11610.1 23.394 436 290 14 106 527 64 469 1.50e-17 85.9
Msa0072910 AT5G04330.1 24.115 452 284 16 106 533 63 479 1.50e-17 86.3
Msa0072910 AT4G36220.1 23.864 440 294 14 104 525 69 485 1.82e-17 85.9
Msa0072910 AT4G13310.1 23.448 435 283 14 106 522 63 465 1.87e-17 85.9
Msa0072910 AT5G36220.2 28.108 185 125 2 351 534 154 331 1.88e-17 84.3
Msa0072910 AT2G30770.1 23.077 429 290 13 106 522 64 464 2.03e-17 85.5
Msa0072910 AT1G11610.2 23.394 436 290 14 106 527 64 469 2.33e-17 85.5
Msa0072910 AT4G37330.1 28.934 197 130 3 343 536 283 472 2.40e-17 85.5
Msa0072910 AT2G29090.2 23.799 437 277 12 104 533 79 466 2.47e-17 85.5
Msa0072910 AT2G29090.1 23.799 437 277 12 104 533 79 466 2.47e-17 85.5
Msa0072910 AT5G47990.1 27.094 203 141 5 341 539 296 495 2.94e-17 85.1
Msa0072910 AT3G26290.1 22.174 460 289 13 91 522 47 465 3.34e-17 85.1
Msa0072910 AT1G74540.1 29.064 203 134 4 334 531 269 466 3.40e-17 85.1
Msa0072910 AT2G26170.1 23.598 428 287 17 104 511 74 481 3.61e-17 85.1
Msa0072910 AT3G26290.2 22.174 460 289 13 91 522 60 478 4.95e-17 84.3
Msa0072910 AT1G13080.2 24.425 348 225 10 194 529 36 357 6.23e-17 83.2
Msa0072910 AT2G45570.1 29.208 202 123 6 351 540 306 499 6.38e-17 84.3
Msa0072910 AT3G19270.1 29.075 227 141 8 305 523 225 439 7.04e-17 83.6
Msa0072910 AT5G36220.1 28.108 185 125 2 351 534 300 477 7.17e-17 84.0
Msa0072910 AT1G13110.1 22.022 445 299 14 104 528 61 477 9.77e-17 83.6
Msa0072910 AT4G19230.2 26.570 207 140 4 331 533 249 447 1.00e-16 83.6
Msa0072910 AT5G05690.3 30.049 203 128 5 331 527 133 327 1.15e-16 82.0
Msa0072910 AT1G33720.2 28.718 195 127 7 354 540 201 391 1.54e-16 82.4
Msa0072910 AT5G06900.1 21.818 495 355 15 60 545 17 488 1.71e-16 82.8
Msa0072910 AT3G19270.2 28.636 220 139 7 305 518 225 432 1.89e-16 82.4
Msa0072910 AT5G10600.1 23.128 454 290 17 104 536 76 491 2.08e-16 82.4
Msa0072910 AT3G26180.1 24.270 445 287 14 106 531 61 474 2.51e-16 82.4
Msa0072910 AT5G05690.1 30.049 203 128 5 331 527 252 446 2.56e-16 82.0
Msa0072910 AT5G67310.1 30.978 184 119 3 354 536 308 484 3.97e-16 81.6
Msa0072910 AT2G30490.1 22.768 448 291 16 99 524 58 472 4.31e-16 81.6
Msa0072910 AT1G50520.1 21.505 465 317 13 101 545 70 506 4.56e-16 81.6
Msa0072910 AT4G19230.1 28.108 185 121 4 331 511 249 425 4.81e-16 81.3
Msa0072910 AT3G20960.1 25.342 292 195 10 270 545 116 400 4.83e-16 80.9
Msa0072910 AT2G23190.1 23.767 446 270 14 107 528 110 509 5.79e-16 81.3
Msa0072910 AT3G20960.2 25.342 292 195 10 270 545 219 503 5.96e-16 81.3
Msa0072910 AT5G05260.1 26.203 187 137 1 342 527 279 465 1.02e-15 80.5
Msa0072910 AT5G07990.1 30.481 187 121 5 342 522 287 470 1.04e-15 80.5
Msa0072910 AT3G20130.2 25.616 203 145 4 341 538 267 468 1.05e-15 80.1
Msa0072910 AT2G29090.3 23.571 420 265 12 121 533 1 371 1.12e-15 79.3
Msa0072910 AT3G20130.1 25.616 203 145 4 341 538 295 496 1.17e-15 80.1
Msa0072910 AT5G05260.2 26.203 187 137 1 342 527 311 497 1.23e-15 80.1
Msa0072910 AT3G20940.1 21.930 456 295 16 104 534 72 491 1.26e-15 80.1
Msa0072910 AT3G53300.1 25.111 450 292 14 91 522 44 466 1.50e-15 79.7
Msa0072910 AT3G26830.1 27.322 183 129 3 346 526 289 469 1.95e-15 79.3
Msa0072910 AT4G22710.1 22.434 419 272 13 105 503 84 469 1.99e-15 79.7
Msa0072910 AT2G42850.1 27.692 195 126 6 342 530 281 466 3.05e-15 79.0
Msa0072910 AT2G27000.1 20.542 443 304 10 99 522 64 477 3.25e-15 79.0
Msa0072910 AT3G26170.1 23.266 447 289 14 106 531 61 474 3.58e-15 78.6
Msa0072910 AT1G16400.1 25.794 252 160 7 288 525 262 500 4.04e-15 78.6
Msa0072910 AT4G22690.1 21.749 423 270 11 105 503 115 500 4.54e-15 78.6
Msa0072910 AT4G15350.1 25.758 198 141 4 341 534 289 484 6.05e-15 77.8
Msa0072910 AT5G45340.2 28.571 203 127 6 331 527 249 439 6.91e-15 77.4
Msa0072910 AT2G23220.1 22.800 250 175 4 288 536 256 488 7.47e-15 77.8
Msa0072910 AT5G10610.1 27.528 178 124 3 354 530 296 469 8.32e-15 77.4
Msa0072910 AT4G12330.1 21.212 429 304 10 105 522 76 481 9.39e-15 77.4
Msa0072910 AT3G20110.1 20.993 443 292 13 104 526 69 473 9.52e-15 77.4
Msa0072910 AT1G79370.1 27.686 242 164 5 292 524 265 504 9.53e-15 77.4
Msa0072910 AT3G20090.1 25.592 211 149 6 341 545 159 367 1.19e-14 76.3
Msa0072910 AT1G13090.2 27.933 179 125 3 346 522 289 465 1.23e-14 77.0
Msa0072910 AT3G20090.2 25.592 211 149 6 341 545 297 505 1.66e-14 76.6
Msa0072910 AT5G45340.1 27.979 193 123 5 331 519 249 429 2.71e-14 75.9
Msa0072910 AT2G14100.1 23.922 255 185 8 296 545 253 503 3.11e-14 75.9
Msa0072910 AT2G22330.1 26.203 187 137 1 337 522 318 504 3.27e-14 75.9
Msa0072910 AT2G22330.2 26.203 187 137 1 337 522 341 527 3.40e-14 75.9
Msa0072910 AT1G01190.1 29.534 193 130 5 336 524 311 501 3.93e-14 75.5
Msa0072910 AT1G01190.2 29.534 193 130 5 336 524 316 506 4.16e-14 75.5
Msa0072910 AT1G28430.1 21.776 473 308 17 93 536 51 490 4.35e-14 75.5
Msa0072910 AT2G26170.2 26.837 313 200 12 214 511 100 398 5.15e-14 74.7
Msa0072910 AT4G37310.1 23.810 252 166 6 301 533 238 482 5.19e-14 75.1
Msa0072910 AT3G20120.4 22.180 266 192 7 292 545 240 502 5.97e-14 74.7
Msa0072910 AT2G02580.1 25.175 429 289 14 106 525 62 467 8.33e-14 74.3
Msa0072910 AT3G20120.2 22.180 266 192 7 292 545 104 366 9.34e-14 73.6
Msa0072910 AT3G20120.3 22.180 266 192 7 292 545 104 366 9.34e-14 73.6
Msa0072910 AT3G20120.1 22.180 266 192 7 292 545 104 366 9.34e-14 73.6
Msa0072910 AT2G32440.2 28.161 174 114 4 346 515 288 454 9.47e-14 74.3
Msa0072910 AT2G32440.1 28.161 174 114 4 346 515 288 454 9.47e-14 74.3
Msa0072910 AT3G52970.1 25.891 421 265 16 99 497 61 456 9.56e-14 74.3
Msa0072910 AT5G24960.1 25.229 436 277 13 104 522 62 465 1.03e-13 73.9
Msa0072910 AT3G44250.1 25.112 446 296 13 91 522 44 465 1.24e-13 73.9
Msa0072910 AT4G39950.1 26.404 178 130 1 346 522 325 502 1.40e-13 73.9
Msa0072910 AT4G39950.2 26.404 178 130 1 346 522 365 542 1.41e-13 73.9
Msa0072910 AT5G36110.1 25.591 254 150 8 288 527 227 455 1.46e-13 73.6
Msa0072910 AT3G26180.2 28.191 188 127 5 346 531 159 340 1.46e-13 72.8
Msa0072910 AT3G26150.1 27.128 188 129 5 346 531 293 474 1.58e-13 73.6
Msa0072910 AT1G16410.1 27.660 188 132 3 342 525 314 501 2.20e-13 73.2
Msa0072910 AT3G61880.1 28.736 174 120 4 351 520 324 497 2.28e-13 73.2
Msa0072910 AT3G61880.2 28.736 174 120 4 351 520 324 497 2.46e-13 73.2
Msa0072910 AT3G20080.2 23.922 255 177 6 293 531 242 495 2.70e-13 72.8
Msa0072910 AT3G20080.1 23.922 255 177 6 293 531 242 495 2.70e-13 72.8
Msa0072910 AT3G26220.1 24.587 484 314 15 71 530 23 479 3.30e-13 72.4
Msa0072910 AT3G26190.1 24.279 416 292 10 91 499 44 443 3.65e-13 72.4
Msa0072910 AT5G42580.1 22.222 234 167 7 325 545 258 489 4.17e-13 72.0
Msa0072910 AT3G32047.1 22.059 272 199 8 278 541 228 494 4.67e-13 72.0
Msa0072910 AT3G20080.4 23.922 255 177 6 293 531 105 358 4.99e-13 71.2
Msa0072910 AT3G20080.5 23.922 255 177 6 293 531 105 358 4.99e-13 71.2
Msa0072910 AT3G20080.6 23.922 255 177 6 293 531 105 358 4.99e-13 71.2
Msa0072910 AT3G20080.3 23.922 255 177 6 293 531 105 358 4.99e-13 71.2
Msa0072910 AT5G04660.1 20.957 439 309 12 98 520 63 479 5.41e-13 72.0
Msa0072910 AT2G30750.1 31.977 172 106 6 348 510 285 454 5.59e-13 71.6
Msa0072910 AT1G64930.1 26.316 190 133 3 349 531 299 488 6.38e-13 71.6
Msa0072910 AT3G53280.1 25.541 462 289 18 91 532 44 470 8.41e-13 71.2
Msa0072910 AT4G15300.1 29.714 175 105 6 351 518 287 450 1.58e-12 70.5
Msa0072910 AT4G15300.3 29.714 175 105 6 351 518 265 428 1.87e-12 70.1
Msa0072910 AT3G52970.2 25.467 428 272 16 99 497 61 470 1.97e-12 70.1
Msa0072910 AT4G15300.2 29.714 175 105 6 351 518 275 438 2.05e-12 70.1
Msa0072910 AT1G12740.1 28.421 190 126 3 349 533 272 456 2.14e-12 69.7
Msa0072910 AT1G12740.2 28.421 190 126 3 349 533 278 462 2.16e-12 69.7
Msa0072910 AT1G64940.1 24.583 240 166 5 303 531 253 488 4.44e-12 68.9
Msa0072910 AT3G50660.1 25.234 214 138 6 328 525 283 490 7.81e-12 68.2
Msa0072910 AT1G58260.1 26.230 183 128 3 346 522 309 490 1.08e-11 67.8
Msa0072910 AT3G44970.1 26.374 273 163 9 262 525 211 454 2.17e-11 66.6
Msa0072910 AT1G73340.1 26.818 220 152 6 298 515 236 448 3.09e-11 66.2
Msa0072910 AT1G64950.1 25.000 240 165 5 303 531 252 487 6.19e-11 65.5
Msa0072910 AT3G25180.2 24.495 396 236 14 63 429 25 386 6.79e-11 64.7

Find 113 sgRNAs with CRISPR-Local

Find 392 sgRNAs with CRISPR-GE


CRISPR-Local

CRISPR-Local
sgRNA_sequence on_target_score Position Region
TTCCACCTATATTTAATTTA+AGG 0.119965 1_2:-46040015 Msa0072910:three_prime_UTR
CAGTTAACCCTTGATGTTAT+TGG 0.144739 1_2:-46044523 Msa0072910:CDS
AAACATGTGCTTAAGAATTA+TGG 0.145542 1_2:-46046060 Msa0072910:CDS
ACATAGGCTGCAAAATTTAT+TGG 0.166999 1_2:-46040249 Msa0072910:three_prime_UTR
GAAGCATGAGTAATGATTTA+TGG 0.171712 1_2:+46046573 None:intergenic
TGATGATGTTTCTGATCTTT+TGG 0.179106 1_2:-46046193 Msa0072910:CDS
AGGTTTCTAGTGTGCAATTA+AGG 0.192192 1_2:-46043399 Msa0072910:CDS
CCATCCAAATCAAATCTTTC+TGG 0.220944 1_2:+46041358 None:intergenic
CGGTGATCAGTTTGCGTTAT+TGG 0.234335 1_2:-46040700 Msa0072910:CDS
CTACAGTCTGATGCAATTAA+TGG 0.238703 1_2:-46044577 Msa0072910:CDS
TTTCGAGGCCCTCCGCTAAA+TGG 0.276020 1_2:+46040729 None:intergenic
CTTAAGAATTATGGGAAATA+TGG 0.296840 1_2:-46046051 Msa0072910:CDS
ATGAAACAAATACAGATTTC+AGG 0.305953 1_2:-46041324 Msa0072910:intron
TCCACCTATATTTAATTTAA+GGG 0.307696 1_2:-46040014 Msa0072910:three_prime_UTR
CTAACAACAACAAAGTTTCT+AGG 0.312841 1_2:+46046099 None:intergenic
CAAATTCCTGATGAGCTTCC+GGG 0.319466 1_2:-46041985 Msa0072910:CDS
TCAAATTCCTGATGAGCTTC+CGG 0.322057 1_2:-46041986 Msa0072910:CDS
TTTGCCAGAAAGATTTGATT+TGG 0.322482 1_2:-46041362 Msa0072910:CDS
CCAGCAGCTAAACGATAAAT+AGG 0.324490 1_2:+46046123 None:intergenic
TCTCTTTACATTGTTCAATA+AGG 0.330261 1_2:+46044204 None:intergenic
AAATCTGTATTTGTTTCATT+TGG 0.333904 1_2:+46041328 None:intergenic
CAACATACATCATTCTTCTA+AGG 0.341540 1_2:-46041917 Msa0072910:intron
AAGATCTTTCATATCTTCAT+AGG 0.350743 1_2:+46042681 None:intergenic
AAAATGCTGTTAGTGTTATC+AGG 0.357270 1_2:-46044241 Msa0072910:CDS
GAACTTCCACCGAACAAATA+TGG 0.360432 1_2:-46046540 Msa0072910:five_prime_UTR
GTGTAAACGGCTTCAATAAC+AGG 0.366085 1_2:+46044454 None:intergenic
AACATGTGCTTAAGAATTAT+GGG 0.366653 1_2:-46046059 Msa0072910:CDS
CAGAATATTGGCATGACTAC+TGG 0.370279 1_2:-46040618 Msa0072910:CDS
TCCAAACTTCATATAACAAA+TGG 0.372246 1_2:+46044359 None:intergenic
CCTATTTATCGTTTAGCTGC+TGG 0.374778 1_2:-46046123 Msa0072910:CDS
GATAATTCCAAGACAAATAA+AGG 0.378686 1_2:-46044267 Msa0072910:CDS
CTATTGCTGAAGGACCTCTT+TGG 0.379152 1_2:-46045978 Msa0072910:CDS
GAAAGTGATGTGAGCCAATC+TGG 0.379298 1_2:+46046276 None:intergenic
GTATTTGTTTCATTTGGTAC+TGG 0.386111 1_2:+46041334 None:intergenic
AAAAGAACTTGCCTTCCAAT+AGG 0.389288 1_2:+46044390 None:intergenic
AAACAACAAAATCCACTTCA+TGG 0.391502 1_2:-46046305 Msa0072910:CDS
GACACTTTATCTTCTAAGTA+AGG 0.393597 1_2:-46043317 Msa0072910:intron
CTCTTTCAGTGCAGTGTAAA+CGG 0.400526 1_2:+46044441 None:intergenic
AATGCAGGATTCTTCCTCAT+TGG 0.409622 1_2:-46042752 Msa0072910:intron
GCAATATTAAATTCTTATGA+TGG 0.414444 1_2:-46040185 Msa0072910:three_prime_UTR
TTTAAATGGATGAATGAGTA+TGG 0.418254 1_2:-46046147 Msa0072910:CDS
GGTTTCTAGTGTGCAATTAA+GGG 0.420397 1_2:-46043398 Msa0072910:CDS
TAATCACCCGGAAGCTCATC+AGG 0.421914 1_2:+46041979 None:intergenic
CTTGTCTATCATGGTGGATA+GGG 0.422197 1_2:-46044635 Msa0072910:CDS
CCACTGGTTCGGTGCTGACT+TGG 0.422337 1_2:-46043339 Msa0072910:CDS
GTCATGCCAATATTCTGATC+AGG 0.425542 1_2:+46040624 None:intergenic
TCAAGCTTAGCACTTGCTAT+AGG 0.432116 1_2:+46046213 None:intergenic
ATAACTTGTGGTATACGAAA+TGG 0.444447 1_2:+46040152 None:intergenic
GAATCCCTTAAATTAAATAT+AGG 0.445458 1_2:+46040010 None:intergenic
TTAGGCAAGGCGCAGGGCTG+TGG 0.452377 1_2:-46044680 Msa0072910:intron
AAAGAACTTGCCTTCCAATA+GGG 0.461153 1_2:+46044391 None:intergenic
ACTTGTCTATCATGGTGGAT+AGG 0.464502 1_2:-46044636 Msa0072910:CDS
CTGGTCCCTGATCAGAATAT+TGG 0.464771 1_2:-46040630 Msa0072910:CDS
CCAGAAAGATTTGATTTGGA+TGG 0.465872 1_2:-46041358 Msa0072910:CDS
GAGAGAGAAAGATGAGAGAG+AGG 0.469391 1_2:+46046414 None:intergenic
ATATTTGTTCGGTGGAAGTT+CGG 0.472758 1_2:+46046542 None:intergenic
AGCATCAATTCTTTCACCCT+CGG 0.474371 1_2:+46044172 None:intergenic
TACAGATTCATTCCATTTAG+CGG 0.482324 1_2:-46040741 Msa0072910:intron
AGCACATGTTTAGCAATAGC+AGG 0.484173 1_2:+46046072 None:intergenic
AGTATAGAGCCATATTTGTT+CGG 0.485018 1_2:+46046531 None:intergenic
AGCACTTGCTATAGGAATGT+TGG 0.493712 1_2:+46046221 None:intergenic
CGTTTACACTGCACTGAAAG+AGG 0.494516 1_2:-46044440 Msa0072910:CDS
CCAAACTTCATATAACAAAT+GGG 0.496868 1_2:+46044360 None:intergenic
CGGATAAACCAATAACATCA+AGG 0.504053 1_2:+46044515 None:intergenic
AAACTGTTTGGGTAAAGAGC+AGG 0.520408 1_2:-46046603 None:intergenic
TGATCACCGACACACTTTCG+AGG 0.520502 1_2:+46040714 None:intergenic
ACATCATACCTCTTCTCTGC+TGG 0.521858 1_2:+46044100 None:intergenic
CAATACATACTACAAATGTA+AGG 0.522728 1_2:-46040590 Msa0072910:intron
CAAACGGTACTTGTCTATCA+TGG 0.529711 1_2:-46044644 Msa0072910:CDS
ATATGTATTAGGCAAGGCGC+AGG 0.532896 1_2:-46044687 Msa0072910:intron
TGGTTCCATCTCTTCACAAA+CGG 0.534442 1_2:-46044660 Msa0072910:CDS
TAATGGAACTGCTGTTAACA+TGG 0.536851 1_2:-46044560 Msa0072910:CDS
CACTGAAAGAGGCAGAGGCT+CGG 0.537519 1_2:-46044429 Msa0072910:CDS
CTTCATGGGTAAGTCCAGAT+TGG 0.538000 1_2:-46046290 Msa0072910:CDS
CACTGCACTGAAAGAGGCAG+AGG 0.540987 1_2:-46044434 Msa0072910:CDS
TCCCTTAAATTAAATATAGG+TGG 0.548489 1_2:+46040013 None:intergenic
AGAAATCATAATATCTTGAC+CGG 0.549490 1_2:+46041945 None:intergenic
TCTTTCATATCTTCATAGGT+AGG 0.550296 1_2:+46042685 None:intergenic
AAGTAACCTACAGGAGGATG+TGG 0.552427 1_2:+46042616 None:intergenic
TGGTAAAGGTCTTGTTGCTG+AGG 0.552693 1_2:-46046031 Msa0072910:CDS
AACAACAAAATCCACTTCAT+GGG 0.557988 1_2:-46046304 Msa0072910:CDS
TGGTCATGAGACCACTGGTT+CGG 0.558645 1_2:-46043350 Msa0072910:CDS
GATTCATTCCATTTAGCGGA+GGG 0.558681 1_2:-46040737 Msa0072910:CDS
ACAGCACATGAACTTTGAGC+TGG 0.559657 1_2:-46040649 Msa0072910:CDS
GTTGCTGGTCATGAGACCAC+TGG 0.562971 1_2:-46043355 Msa0072910:CDS
GTTGAGATACGAGGATGAAG+TGG 0.568135 1_2:+46046354 None:intergenic
TTTGCTTGCCAGCAGAGAAG+AGG 0.570271 1_2:-46044108 Msa0072910:intron
ATCTGGACTTACCCATGAAG+TGG 0.570944 1_2:+46046293 None:intergenic
AATTATGGGAAATATGGTAA+AGG 0.572332 1_2:-46046045 Msa0072910:CDS
AAGTACCGTTTGTGAAGAGA+TGG 0.575024 1_2:+46044655 None:intergenic
CATATTTACTGCATAACTTG+TGG 0.577946 1_2:+46040140 None:intergenic
ATGTCAACTATTTCAACCGT+TGG 0.584852 1_2:+46040285 None:intergenic
CTTCCAATAGGGCAAAAGAT+CGG 0.596924 1_2:+46044402 None:intergenic
ATAGAGCCATATTTGTTCGG+TGG 0.598575 1_2:+46046534 None:intergenic
TAAAGAGATTGTAGAGTCCG+AGG 0.599235 1_2:-46044189 Msa0072910:CDS
TCATGCCAATATTCTGATCA+GGG 0.603426 1_2:+46040625 None:intergenic
CAGGAGGATGTGGATAAAGT+CGG 0.603592 1_2:+46042626 None:intergenic
TGCTGAAGGACCTCTTTGGA+CGG 0.606944 1_2:-46045974 Msa0072910:intron
TCATTCATCCATTTAAACAA+AGG 0.610701 1_2:+46046153 None:intergenic
CCAAGTCAGCACCGAACCAG+TGG 0.613802 1_2:+46043339 None:intergenic
GGATAAACCAATAACATCAA+GGG 0.614357 1_2:+46044516 None:intergenic
GGTGATTACAAAATCGATGC+CGG 0.617396 1_2:-46041964 Msa0072910:CDS
TTAAAGAATACCGTCCAAAG+AGG 0.632761 1_2:+46045964 None:intergenic
AGATTCATTCCATTTAGCGG+AGG 0.637825 1_2:-46040738 Msa0072910:CDS
GAACATGAACATGAACATGA+TGG 0.642390 1_2:+46046441 None:intergenic
TGTACATGAAACTGAGCCAA+CGG 0.644283 1_2:-46040301 Msa0072910:exon
AAAGAGATTGTAGAGTCCGA+GGG 0.656460 1_2:-46044188 Msa0072910:CDS
ATTGGCAAAAGCTCAAGAAG+AGG 0.656759 1_2:-46042734 Msa0072910:CDS
GTCAAAGTTGTAGTTGAACA+CGG 0.667485 1_2:+46044495 None:intergenic
GGAGGGCCTCGAAAGTGTGT+CGG 0.669867 1_2:-46040720 Msa0072910:CDS
ACGGTACTTGTCTATCATGG+TGG 0.676757 1_2:-46044641 Msa0072910:CDS
TATGTATTAGGCAAGGCGCA+GGG 0.677976 1_2:-46044686 Msa0072910:intron
TGGAACTGCTGTTAACATGG+AGG 0.731652 1_2:-46044557 Msa0072910:CDS

CRISPR-GE

badsite warning sgRNA_sequence Strand Position Region GC_content
!! GAATTATTATTGAATAAATA+AGG - chr1_2:46040767-46040786 Msa0072910:intron 10.0%
!!! TACATTAAATTTTTTAAAAG+GGG - chr1_2:46042862-46042881 Msa0072910:intron 10.0%
!!! TGTTGTATAATTTTTTTTTA+TGG - chr1_2:46043468-46043487 Msa0072910:intron 10.0%
!! TAAAAATAATATAAGTGTAA+AGG + chr1_2:46044390-46044409 None:intergenic 10.0%
!! TTTACAAAAAAGAGATATTT+CGG + chr1_2:46040899-46040918 None:intergenic 15.0%
!! AAAATTACATATCGAATTAT+TGG + chr1_2:46041512-46041531 None:intergenic 15.0%
!!! ATAATTCGATATGTAATTTT+AGG - chr1_2:46041512-46041531 Msa0072910:intron 15.0%
!!! AAGTTTGTAAATTTTAAAAC+TGG + chr1_2:46041668-46041687 None:intergenic 15.0%
!!! TTAAAATTTACAAACTTTTG+CGG - chr1_2:46041671-46041690 Msa0072910:intron 15.0%
!!! AATGGTTTTATAGATTATTT+TGG - chr1_2:46041859-46041878 Msa0072910:intron 15.0%
!!! ATGGTTTTATAGATTATTTT+GGG - chr1_2:46041860-46041879 Msa0072910:intron 15.0%
!!! GTTATTTTCTTATATGTATT+AGG - chr1_2:46041903-46041922 Msa0072910:intron 15.0%
!! ATTGAAATATGAAATTTACA+TGG + chr1_2:46042798-46042817 None:intergenic 15.0%
!! ATATAAACTAAAAATCAGAA+TGG + chr1_2:46043728-46043747 None:intergenic 15.0%
!!! TTTAATCTTTTATACTTTGT+TGG - chr1_2:46044502-46044521 Msa0072910:CDS 15.0%
!!! ACTAATTTTATATTTTCTGA+TGG - chr1_2:46044548-46044567 Msa0072910:CDS 15.0%
!!! TTTTTTATTTTAATCACCTA+CGG + chr1_2:46045108-46045127 None:intergenic 15.0%
!!! TTTTTCTTCCTTTGTTTAAA+TGG - chr1_2:46040440-46040459 Msa0072910:intron 20.0%
!! AACATAAAACATAATCAGAA+TGG + chr1_2:46040679-46040698 None:intergenic 20.0%
!!! TTATGTTTTTTATAGCAATG+TGG - chr1_2:46040692-46040711 Msa0072910:CDS 20.0%
!!! TATGTTTTTTATAGCAATGT+GGG - chr1_2:46040693-46040712 Msa0072910:CDS 20.0%
!!! TGATGAGTTTATTTTTTGAA+TGG - chr1_2:46041036-46041055 Msa0072910:intron 20.0%
!! GTAACATAGTATTAATTGAA+GGG + chr1_2:46041194-46041213 None:intergenic 20.0%
!! TGTAACATAGTATTAATTGA+AGG + chr1_2:46041195-46041214 None:intergenic 20.0%
!! AAATTATCCTAATCAACTAT+TGG + chr1_2:46041258-46041277 None:intergenic 20.0%
!! AATAGTTGATTAGGATAATT+TGG - chr1_2:46041257-46041276 Msa0072910:intron 20.0%
!! AATATAAATCTACTAACTAC+TGG - chr1_2:46041809-46041828 Msa0072910:intron 20.0%
!! ATATAAATCTACTAACTACT+GGG - chr1_2:46041810-46041829 Msa0072910:intron 20.0%
!!! TTACTTTTTTGTTTTTGGAA+TGG + chr1_2:46041841-46041860 None:intergenic 20.0%
!! TTCCAAAAACAAAAAAGTAA+TGG - chr1_2:46041841-46041860 Msa0072910:intron 20.0%
!!! AACCATTACTTTTTTGTTTT+TGG + chr1_2:46041846-46041865 None:intergenic 20.0%
!!! ATAAAAGCAAAGTATACTTT+TGG + chr1_2:46042536-46042555 None:intergenic 20.0%
!!! CATTTTTCCATTTTTTTTCT+TGG - chr1_2:46042835-46042854 Msa0072910:intron 20.0%
!! TAAGTTAATCACAAATATGA+AGG - chr1_2:46043031-46043050 Msa0072910:intron 20.0%
!! AAGAATATAAACATGTAGAA+CGG + chr1_2:46043162-46043181 None:intergenic 20.0%
!! ATGTTTATATTCTTACTTAG+TGG - chr1_2:46043168-46043187 Msa0072910:intron 20.0%
!! GATTAATTAAGAGTTCAAAA+GGG + chr1_2:46043555-46043574 None:intergenic 20.0%
!! AATAGAGATAATAATTCACA+GGG + chr1_2:46043829-46043848 None:intergenic 20.0%
!! TAATAGAGATAATAATTCAC+AGG + chr1_2:46043830-46043849 None:intergenic 20.0%
!! ATTATTATCTCTATTAATGC+AGG - chr1_2:46043834-46043853 Msa0072910:intron 20.0%
!!! AAAGTTCTAAACTTATGTAT+AGG - chr1_2:46044069-46044088 Msa0072910:intron 20.0%
!! AATTAAACTGTTTGTCATAT+CGG + chr1_2:46044117-46044136 None:intergenic 20.0%
!!! AGTAATATTTGCTGATATAA+TGG - chr1_2:46044158-46044177 Msa0072910:CDS 20.0%
!! GTAATCAAAGAATATCAAAA+AGG + chr1_2:46044234-46044253 None:intergenic 20.0%
!! CAATTTGCAATTTAGTATAT+GGG - chr1_2:46044364-46044383 Msa0072910:intron 20.0%
!!! TTTCCTTGATTTTTTTTCAA+AGG - chr1_2:46044848-46044867 Msa0072910:intron 20.0%
!!! TATTTCATTATGATTTTTCC+AGG - chr1_2:46045194-46045213 Msa0072910:intron 20.0%
!! AAATCTGTATTTGTTTCATT+TGG + chr1_2:46045276-46045295 None:intergenic 20.0%
!! AATAAGCTGAAAACAATTTA+TGG - chr1_2:46045578-46045597 Msa0072910:intron 20.0%
!! AGTATAAAATATGCCAATTA+GGG + chr1_2:46045695-46045714 None:intergenic 20.0%
!!! TCTTTTCTTTGTTATCTTTT+TGG - chr1_2:46045751-46045770 Msa0072910:intron 20.0%
!! TACAAATAAAAATACTCCAT+AGG + chr1_2:46045801-46045820 None:intergenic 20.0%
!! GCAATATTAAATTCTTATGA+TGG - chr1_2:46046416-46046435 Msa0072910:CDS 20.0%
!!! TTCCACCTATATTTAATTTA+AGG - chr1_2:46046586-46046605 Msa0072910:five_prime_UTR 20.0%
!!! TCCACCTATATTTAATTTAA+GGG - chr1_2:46046587-46046606 Msa0072910:five_prime_UTR 20.0%
!! GAATCCCTTAAATTAAATAT+AGG + chr1_2:46046594-46046613 None:intergenic 20.0%
!! TTTTGATGTTGTTAAGGATT+TGG + chr1_2:46040350-46040369 None:intergenic 25.0%
!! ATCATCTTTTGATGTTGTTA+AGG + chr1_2:46040356-46040375 None:intergenic 25.0%
! TCATTCATCCATTTAAACAA+AGG + chr1_2:46040451-46040470 None:intergenic 25.0%
! TTTAAATGGATGAATGAGTA+TGG - chr1_2:46040454-46040473 Msa0072910:intron 25.0%
! AAACATGTGCTTAAGAATTA+TGG - chr1_2:46040541-46040560 Msa0072910:intron 25.0%
! AACATGTGCTTAAGAATTAT+GGG - chr1_2:46040542-46040561 Msa0072910:intron 25.0%
! CTTAAGAATTATGGGAAATA+TGG - chr1_2:46040550-46040569 Msa0072910:intron 25.0%
! AATTATGGGAAATATGGTAA+AGG - chr1_2:46040556-46040575 Msa0072910:intron 25.0%
! CAATTTAGTCTCTCAAATAT+AGG - chr1_2:46040820-46040839 Msa0072910:intron 25.0%
!!! TTCAAAATGAATGTCACTTT+CGG - chr1_2:46041131-46041150 Msa0072910:intron 25.0%
! AAACAAACCAATAGTTGATT+AGG - chr1_2:46041248-46041267 Msa0072910:intron 25.0%
! TTAACTCATCAATAACTTGA+GGG + chr1_2:46041458-46041477 None:intergenic 25.0%
! ATTAACTCATCAATAACTTG+AGG + chr1_2:46041459-46041478 None:intergenic 25.0%
!!! TTTGCTGTGATGTAATTTTA+TGG - chr1_2:46041576-46041595 Msa0072910:intron 25.0%
! CAGTAAGAACTTTAATTCAA+TGG - chr1_2:46041706-46041725 Msa0072910:intron 25.0%
! AAGAACTTTAATTCAATGGT+TGG - chr1_2:46041710-46041729 Msa0072910:intron 25.0%
! AGAACTCATTGTATACATTA+AGG + chr1_2:46041744-46041763 None:intergenic 25.0%
! TTTCTTATATGTATTAGGCA+AGG - chr1_2:46041908-46041927 Msa0072910:intron 25.0%
! CCAAACTTCATATAACAAAT+GGG + chr1_2:46042244-46042263 None:intergenic 25.0%
! TCCAAACTTCATATAACAAA+TGG + chr1_2:46042245-46042264 None:intergenic 25.0%
! AATTAAAACAAGGACAGAAA+AGG + chr1_2:46042288-46042307 None:intergenic 25.0%
! GATAATTCCAAGACAAATAA+AGG - chr1_2:46042334-46042353 Msa0072910:intron 25.0%
! TCTCTTTACATTGTTCAATA+AGG + chr1_2:46042400-46042419 None:intergenic 25.0%
! ACTCATAATCTAACAGAAAA+GGG + chr1_2:46042638-46042657 None:intergenic 25.0%
! GTAATGACCAAGAAAAAAAA+TGG + chr1_2:46042845-46042864 None:intergenic 25.0%
!! ACCTTCTAATTTTCTGATTT+TGG - chr1_2:46042888-46042907 Msa0072910:intron 25.0%
! TCCAAAATCAGAAAATTAGA+AGG + chr1_2:46042892-46042911 None:intergenic 25.0%
! ATTGTCATTGTATACTGATA+TGG + chr1_2:46043090-46043109 None:intergenic 25.0%
! ACAATACTTTGATTCATCTT+CGG - chr1_2:46043105-46043124 Msa0072910:intron 25.0%
! AACGTTATTGAAAAATTGAG+AGG + chr1_2:46043438-46043457 None:intergenic 25.0%
!!! TTTTTTTTTATGGCGTAACA+TGG - chr1_2:46043478-46043497 Msa0072910:intron 25.0%
! CGATTAATTAAGAGTTCAAA+AGG + chr1_2:46043556-46043575 None:intergenic 25.0%
! ATCTAGCTATGAATATAGAA+AGG - chr1_2:46043615-46043634 Msa0072910:intron 25.0%
! AATGAAATTAGAAGGTTATG+AGG + chr1_2:46043667-46043686 None:intergenic 25.0%
! ATAGAGATAATAATTCACAG+GGG + chr1_2:46043828-46043847 None:intergenic 25.0%
! AAGATCTTTCATATCTTCAT+AGG + chr1_2:46043923-46043942 None:intergenic 25.0%
! TATGTTACTATCTTCATAAC+TGG - chr1_2:46044255-46044274 Msa0072910:CDS 25.0%
! GCAATTTGCAATTTAGTATA+TGG - chr1_2:46044363-46044382 Msa0072910:intron 25.0%
!! GTTTGACATTGGTTAATAAA+AGG + chr1_2:46044418-46044437 None:intergenic 25.0%
! ATCTTCTTATCAATACCTTA+AGG + chr1_2:46044594-46044613 None:intergenic 25.0%
! AGAAATCATAATATCTTGAC+CGG + chr1_2:46044659-46044678 None:intergenic 25.0%
!! AAAGAGAAGCATAATATCAA+AGG + chr1_2:46044760-46044779 None:intergenic 25.0%
!!! ACAGAAGATTCATTTTGAAA+TGG + chr1_2:46044829-46044848 None:intergenic 25.0%
!! TGTCCTTTGAAAAAAAATCA+AGG + chr1_2:46044854-46044873 None:intergenic 25.0%
!!! TTGATTTTTTTTCAAAGGAC+AGG - chr1_2:46044853-46044872 Msa0072910:intron 25.0%
!!! TGATTAGTTTTTCAAATCAG+TGG - chr1_2:46045023-46045042 Msa0072910:intron 25.0%
!! ATTATGATTTTTCCAGGTTT+GGG - chr1_2:46045200-46045219 Msa0072910:intron 25.0%
! ATGAAACAAATACAGATTTC+AGG - chr1_2:46045277-46045296 Msa0072910:intron 25.0%
! TTACACAATAAGATTCTGTT+TGG - chr1_2:46045380-46045399 Msa0072910:intron 25.0%
! AAACAAATGTATGTCTGTTT+GGG + chr1_2:46045633-46045652 None:intergenic 25.0%
! TAAACAAATGTATGTCTGTT+TGG + chr1_2:46045634-46045653 None:intergenic 25.0%
! GAGTATAAAATATGCCAATT+AGG + chr1_2:46045696-46045715 None:intergenic 25.0%
!!! TTTCTTTGTTATCTTTTTGG+AGG - chr1_2:46045754-46045773 Msa0072910:intron 25.0%
!!! TTCTTTGTTATCTTTTTGGA+GGG - chr1_2:46045755-46045774 Msa0072910:intron 25.0%
!!! CATTTTTGTTATCAATCCTA+TGG - chr1_2:46045782-46045801 Msa0072910:intron 25.0%
! CAATACATACTACAAATGTA+AGG - chr1_2:46046011-46046030 Msa0072910:CDS 25.0%
!! ATTTTCCGACTATAAATGAA+AGG - chr1_2:46046216-46046235 Msa0072910:CDS 25.0%
!! CTTTTCCTTTCATTTATAGT+CGG + chr1_2:46046224-46046243 None:intergenic 25.0%
!! ACATTTTATTGTGACCTAAT+AGG - chr1_2:46046258-46046277 Msa0072910:CDS 25.0%
! TGCAAAAACAAAATCCTATT+AGG + chr1_2:46046275-46046294 None:intergenic 25.0%
!!! TAATAGGATTTTGTTTTTGC+AGG - chr1_2:46046274-46046293 Msa0072910:CDS 25.0%
!!! AATAGGATTTTGTTTTTGCA+GGG - chr1_2:46046275-46046294 Msa0072910:CDS 25.0%
! TCCCTTAAATTAAATATAGG+TGG + chr1_2:46046591-46046610 None:intergenic 25.0%
GAAGCATGAGTAATGATTTA+TGG + chr1_2:46040031-46040050 None:intergenic 30.0%
AGTATAGAGCCATATTTGTT+CGG + chr1_2:46040073-46040092 None:intergenic 30.0%
!! AACATGATGGCATTGTTTTT+GGG + chr1_2:46040150-46040169 None:intergenic 30.0%
!!! AAGTGGATTTTGTTGTTTCA+GGG + chr1_2:46040294-46040313 None:intergenic 30.0%
AAACAACAAAATCCACTTCA+TGG - chr1_2:46040296-46040315 Msa0072910:exon 30.0%
AACAACAAAATCCACTTCAT+GGG - chr1_2:46040297-46040316 Msa0072910:exon 30.0%
!! TGATGATGTTTCTGATCTTT+TGG - chr1_2:46040408-46040427 Msa0072910:intron 30.0%
!! GATGATGTTTCTGATCTTTT+GGG - chr1_2:46040409-46040428 Msa0072910:intron 30.0%
CTAACAACAACAAAGTTTCT+AGG + chr1_2:46040505-46040524 None:intergenic 30.0%
!! AGGTTTCTGAGTTTTTGTTT+GGG - chr1_2:46040590-46040609 Msa0072910:intron 30.0%
! TTTTGCTCCTCGAAATTTTA+AGG - chr1_2:46040791-46040810 Msa0072910:intron 30.0%
! TTTGCTCCTCGAAATTTTAA+GGG - chr1_2:46040792-46040811 Msa0072910:intron 30.0%
CAATTTCGTCGCTTAAATTA+AGG - chr1_2:46040849-46040868 Msa0072910:intron 30.0%
AAAAGAGATATTTCGGTTGA+GGG + chr1_2:46040892-46040911 None:intergenic 30.0%
AAAAAGAGATATTTCGGTTG+AGG + chr1_2:46040893-46040912 None:intergenic 30.0%
! TTAATTTTTCCTCCTTTGTC+CGG - chr1_2:46041371-46041390 Msa0072910:CDS 30.0%
TAACTCATCAATAACTTGAG+GGG + chr1_2:46041457-46041476 None:intergenic 30.0%
ACTTTAATTCAATGGTTGGA+TGG - chr1_2:46041714-46041733 Msa0072910:intron 30.0%
TTTATATTTACTCCTTCGTC+CGG + chr1_2:46041797-46041816 None:intergenic 30.0%
!!! TATAGATTATTTTGGGCATC+CGG - chr1_2:46041867-46041886 Msa0072910:intron 30.0%
GGATAAACCAATAACATCAA+GGG + chr1_2:46042088-46042107 None:intergenic 30.0%
!! CCCATTTGTTATATGAAGTT+TGG - chr1_2:46042241-46042260 Msa0072910:intron 30.0%
TCTGCAGCAAAATTAAAACA+AGG + chr1_2:46042298-46042317 None:intergenic 30.0%
!! TTTTCAGCCTTTATTTGTCT+TGG + chr1_2:46042344-46042363 None:intergenic 30.0%
AAAATGCTGTTAGTGTTATC+AGG - chr1_2:46042360-46042379 Msa0072910:intron 30.0%
AGCAAAAATCGAAGAATACT+AGG + chr1_2:46042479-46042498 None:intergenic 30.0%
GACTCATAATCTAACAGAAA+AGG + chr1_2:46042639-46042658 None:intergenic 30.0%
!! TACCATTTCTGAATTTTGAC+AGG - chr1_2:46042662-46042681 Msa0072910:CDS 30.0%
GACACTTTATCTTCTAAGTA+AGG - chr1_2:46043284-46043303 Msa0072910:intron 30.0%
TACACTGAAGAAGAGTAAAA+TGG + chr1_2:46043312-46043331 None:intergenic 30.0%
TAGCTATGAATATAGAAAGG+TGG - chr1_2:46043618-46043637 Msa0072910:intron 30.0%
AGGTTATGAGGTCATTAAAT+TGG + chr1_2:46043655-46043674 None:intergenic 30.0%
TAGAGATAATAATTCACAGG+GGG + chr1_2:46043827-46043846 None:intergenic 30.0%
TCTTTCATATCTTCATAGGT+AGG + chr1_2:46043919-46043938 None:intergenic 30.0%
AAGACATTCATACTGGAAAT+TGG + chr1_2:46044014-46044033 None:intergenic 30.0%
AAACTCAAAGACATTCATAC+TGG + chr1_2:46044021-46044040 None:intergenic 30.0%
ATGTATAGGTTATGCTTGAT+AGG - chr1_2:46044083-46044102 Msa0072910:intron 30.0%
CTAAATTGCAAATTGCCTTA+AGG + chr1_2:46044359-46044378 None:intergenic 30.0%
TAAGTGATGAAGTTTGACAT+TGG + chr1_2:46044429-46044448 None:intergenic 30.0%
CAACATACATCATTCTTCTA+AGG - chr1_2:46044684-46044703 Msa0072910:intron 30.0%
!!! ATTTTGAAATGGAATCGAAC+AGG + chr1_2:46044818-46044837 None:intergenic 30.0%
CAGAAAGAAGAATAATACTC+TGG - chr1_2:46044883-46044902 Msa0072910:intron 30.0%
!!! AAGTTACCTTGTCTCTTTTT+TGG - chr1_2:46044943-46044962 Msa0072910:intron 30.0%
TGAAAACCAAAAAAGAGACA+AGG + chr1_2:46044952-46044971 None:intergenic 30.0%
!! AATTTGCTGTTATCAGTGTT+CGG - chr1_2:46044999-46045018 Msa0072910:intron 30.0%
!! TACACACCTTATTTCTATCT+CGG - chr1_2:46045133-46045152 Msa0072910:intron 30.0%
TCAAAACCGAGATAGAAATA+AGG + chr1_2:46045142-46045161 None:intergenic 30.0%
! CATTATGATTTTTCCAGGTT+TGG - chr1_2:46045199-46045218 Msa0072910:intron 30.0%
TTTGCCAGAAAGATTTGATT+TGG - chr1_2:46045239-46045258 Msa0072910:intron 30.0%
GTATTTGTTTCATTTGGTAC+TGG + chr1_2:46045270-46045289 None:intergenic 30.0%
!! TGTAATTTACACCACTTTTG+TGG + chr1_2:46045337-46045356 None:intergenic 30.0%
!! GTTGTTTTCATAAGCTATCA+TGG - chr1_2:46045543-46045562 Msa0072910:intron 30.0%
! AAAGAAAAGATAAGAGTGCA+TGG + chr1_2:46045741-46045760 None:intergenic 30.0%
TACAGATTCATTCCATTTAG+CGG - chr1_2:46045860-46045879 Msa0072910:intron 30.0%
ACTTGCAATGCATAGAAAAT+CGG + chr1_2:46046108-46046127 None:intergenic 30.0%
ACATAGGCTGCAAAATTTAT+TGG - chr1_2:46046352-46046371 Msa0072910:CDS 30.0%
! ATAACTTGTGGTATACGAAA+TGG + chr1_2:46046452-46046471 None:intergenic 30.0%
CATATTTACTGCATAACTTG+TGG + chr1_2:46046464-46046483 None:intergenic 30.0%
! ATATTTGTTCGGTGGAAGTT+CGG + chr1_2:46040062-46040081 None:intergenic 35.0%
!!! CATTGTTTTTGGGTTTACGT+TGG + chr1_2:46040140-46040159 None:intergenic 35.0%
! GAACATGATGGCATTGTTTT+TGG + chr1_2:46040151-46040170 None:intergenic 35.0%
GAACATGAACATGAACATGA+TGG + chr1_2:46040163-46040182 None:intergenic 35.0%
! GAAGTGGATAACGTTTTTGT+GGG + chr1_2:46040234-46040253 None:intergenic 35.0%
! TGAAGTGGATAACGTTTTTG+TGG + chr1_2:46040235-46040254 None:intergenic 35.0%
!!! TGTTGTTTCAGGGTTTTTGT+TGG + chr1_2:46040284-46040303 None:intergenic 35.0%
!!! GAAGTGGATTTTGTTGTTTC+AGG + chr1_2:46040295-46040314 None:intergenic 35.0%
! GAGGTTTCTGAGTTTTTGTT+TGG - chr1_2:46040589-46040608 Msa0072910:intron 35.0%
!! GGTTTCTGAGTTTTTGTTTG+GGG - chr1_2:46040591-46040610 Msa0072910:CDS 35.0%
TTAAAGAATACCGTCCAAAG+AGG + chr1_2:46040640-46040659 None:intergenic 35.0%
! TATAGCAATGTGGGATGTTT+TGG - chr1_2:46040702-46040721 Msa0072910:CDS 35.0%
! TTTTGTAAATTGACCAACCC+TGG - chr1_2:46040910-46040929 Msa0072910:intron 35.0%
TTTAGTCCTTGAAATTGCCA+GGG + chr1_2:46040961-46040980 None:intergenic 35.0%
! TTTTAGTCCTTGAAATTGCC+AGG + chr1_2:46040962-46040981 None:intergenic 35.0%
!! AAGCGACACTCATTTTGAAA+CGG + chr1_2:46041340-46041359 None:intergenic 35.0%
!! AAGCGACACTCATTTTGAAA+CGG - chr1_2:46041340-46041359 Msa0072910:CDS 35.0%
! TAATTTTTCCTCCTTTGTCC+GGG - chr1_2:46041372-46041391 Msa0072910:CDS 35.0%
AACTCATCAATAACTTGAGG+GGG + chr1_2:46041456-46041475 None:intergenic 35.0%
GTATACAATGAGTTCTTGCA+TGG - chr1_2:46041748-46041767 Msa0072910:intron 35.0%
TTATATTTACTCCTTCGTCC+GGG + chr1_2:46041796-46041815 None:intergenic 35.0%
AATAACTGTAACAAGATCGC+CGG + chr1_2:46041889-46041908 None:intergenic 35.0%
CTACAGTCTGATGCAATTAA+TGG - chr1_2:46042024-46042043 Msa0072910:intron 35.0%
TAATGGAACTGCTGTTAACA+TGG - chr1_2:46042041-46042060 Msa0072910:intron 35.0%
CAGTTAACCCTTGATGTTAT+TGG - chr1_2:46042078-46042097 Msa0072910:intron 35.0%
CGGATAAACCAATAACATCA+AGG + chr1_2:46042089-46042108 None:intergenic 35.0%
GTCAAAGTTGTAGTTGAACA+CGG + chr1_2:46042109-46042128 None:intergenic 35.0%
AAAGAACTTGCCTTCCAATA+GGG + chr1_2:46042213-46042232 None:intergenic 35.0%
AAAAGAACTTGCCTTCCAAT+AGG + chr1_2:46042214-46042233 None:intergenic 35.0%
TGCCTGTCAAAATTCAGAAA+TGG + chr1_2:46042667-46042686 None:intergenic 35.0%
! ACATTCTGTTCAAGTTACTC+AGG - chr1_2:46042749-46042768 Msa0072910:intron 35.0%
TTTCCTCAATTGTTGAGCTT+TGG - chr1_2:46042985-46043004 Msa0072910:intron 35.0%
!! AGGTTTCTAGTGTGCAATTA+AGG - chr1_2:46043202-46043221 Msa0072910:intron 35.0%
!! GGTTTCTAGTGTGCAATTAA+GGG - chr1_2:46043203-46043222 Msa0072910:intron 35.0%
! CTTTTGTCAATGTTAGTTGC+TGG - chr1_2:46043231-46043250 Msa0072910:intron 35.0%
CCAACAAATCGTAAAGAAGA+GGG + chr1_2:46043376-46043395 None:intergenic 35.0%
TCCAACAAATCGTAAAGAAG+AGG + chr1_2:46043377-46043396 None:intergenic 35.0%
! TTTTGCAGTCAAATCGTGTT+GGG + chr1_2:46043415-46043434 None:intergenic 35.0%
ATTAGCTATGAGGACAAAAG+GGG + chr1_2:46043597-46043616 None:intergenic 35.0%
! GATTAGCTATGAGGACAAAA+GGG + chr1_2:46043598-46043617 None:intergenic 35.0%
! AGATTAGCTATGAGGACAAA+AGG + chr1_2:46043599-46043618 None:intergenic 35.0%
! TCATAGCTAGATTAGCTATG+AGG + chr1_2:46043607-46043626 None:intergenic 35.0%
CAGAGCTGAATGAAATTAGA+AGG + chr1_2:46043675-46043694 None:intergenic 35.0%
TTTCAGAAATTCCAGCAATC+AGG + chr1_2:46044188-46044207 None:intergenic 35.0%
CTTCATAACTGGTACTGTTT+AGG - chr1_2:46044266-46044285 Msa0072910:CDS 35.0%
! GTTTAGGAGAAGCATATCAT+TGG - chr1_2:46044282-46044301 Msa0072910:CDS 35.0%
TTGCAAATTGCCTTAAGGTT+TGG + chr1_2:46044354-46044373 None:intergenic 35.0%
!! GGTTTTGTGTAAGACTTTGT+TGG + chr1_2:46044461-46044480 None:intergenic 35.0%
ATGTACAGCTATATCTAGAG+AGG + chr1_2:46044482-46044501 None:intergenic 35.0%
TATGACTCTATGCATCCTTA+AGG - chr1_2:46044576-46044595 Msa0072910:CDS 35.0%
CTTGATGTTCTTAAGTGAGA+AGG - chr1_2:46044712-46044731 Msa0072910:intron 35.0%
CCATCCAAATCAAATCTTTC+TGG + chr1_2:46045246-46045265 None:intergenic 35.0%
!! CCAGAAAGATTTGATTTGGA+TGG - chr1_2:46045243-46045262 Msa0072910:intron 35.0%
ATTATTGCACTCCACAAAAG+TGG - chr1_2:46045323-46045342 Msa0072910:intron 35.0%
TCAAATAAGCCAATCTACAC+AGG - chr1_2:46045669-46045688 Msa0072910:intron 35.0%
ATGAAACTTAGTAGGACTGT+AGG + chr1_2:46045718-46045737 None:intergenic 35.0%
TAAAAAGACTGCAAGAGCAA+CGG + chr1_2:46045933-46045952 None:intergenic 35.0%
TCATGCCAATATTCTGATCA+GGG + chr1_2:46045979-46045998 None:intergenic 35.0%
! TGATATGTGTTTTCTGCAAG+TGG - chr1_2:46046054-46046073 Msa0072910:CDS 35.0%
ATGTCAACTATTTCAACCGT+TGG + chr1_2:46046319-46046338 None:intergenic 35.0%
!!! CATCCACTTTTTCTTCACAT+AGG - chr1_2:46046336-46046355 Msa0072910:CDS 35.0%
GAACTTCCACCGAACAAATA+TGG - chr1_2:46040061-46040080 Msa0072910:three_prime_UTR 40.0%
ATAGAGCCATATTTGTTCGG+TGG + chr1_2:46040070-46040089 None:intergenic 40.0%
! TTTTTGTGGGAGTGGTGTTT+TGG + chr1_2:46040221-46040240 None:intergenic 40.0%
! GAGGATTTTGTTGAGATACG+AGG + chr1_2:46040259-46040278 None:intergenic 40.0%
!! TTCAGGGTTTTTGTTGGTTG+AGG + chr1_2:46040278-46040297 None:intergenic 40.0%
!! AGCACTTGCTATAGGAATGT+TGG + chr1_2:46040383-46040402 None:intergenic 40.0%
!! TCAAGCTTAGCACTTGCTAT+AGG + chr1_2:46040391-46040410 None:intergenic 40.0%
!! GATGTTTCTGATCTTTTGGG+TGG - chr1_2:46040412-46040431 Msa0072910:intron 40.0%
CCAGCAGCTAAACGATAAAT+AGG + chr1_2:46040481-46040500 None:intergenic 40.0%
CCTATTTATCGTTTAGCTGC+TGG - chr1_2:46040478-46040497 Msa0072910:intron 40.0%
AGCACATGTTTAGCAATAGC+AGG + chr1_2:46040532-46040551 None:intergenic 40.0%
!! TCTGAGTTTTTGTTTGGGGA+TGG - chr1_2:46040595-46040614 Msa0072910:CDS 40.0%
!!! GATGGTTTTGCTATTGCTGA+AGG - chr1_2:46040613-46040632 Msa0072910:CDS 40.0%
TTTAGTCCCTCAAATTGCCA+GGG + chr1_2:46040930-46040949 None:intergenic 40.0%
ATTTAGTCCCTCAAATTGCC+AGG + chr1_2:46040931-46040950 None:intergenic 40.0%
!!! GACACTCATTTTGAAACGGA+GGG + chr1_2:46041344-46041363 None:intergenic 40.0%
ATTGCACACAGGTTAAGGAA+TGG + chr1_2:46041314-46041333 None:intergenic 40.0%
TTCCTTAACCTGTGTGCAAT+TGG - chr1_2:46041314-46041333 Msa0072910:intron 40.0%
!!! GACACTCATTTTGAAACGGA+GGG - chr1_2:46041344-46041363 Msa0072910:CDS 40.0%
CTAGTTTGAGCTAAGGGATA+AGG + chr1_2:46041420-46041439 None:intergenic 40.0%
! GCTCAACTAGTTTGAGCTAA+GGG + chr1_2:46041426-46041445 None:intergenic 40.0%
! AGCTCAACTAGTTTGAGCTA+AGG + chr1_2:46041427-46041446 None:intergenic 40.0%
ATCAATAACTTGAGGGGGTT+GGG + chr1_2:46041451-46041470 None:intergenic 40.0%
GAGCATGCACACAAAAGTTT+AGG - chr1_2:46041549-46041568 Msa0072910:intron 40.0%
! TTTACAAACTTTTGCGGACC+TGG - chr1_2:46041677-46041696 Msa0072910:intron 40.0%
AAGTTCTTACTGAGTAGACC+AGG + chr1_2:46041698-46041717 None:intergenic 40.0%
AATGAGTTCTTGCATGGAGT+TGG - chr1_2:46041754-46041773 Msa0072910:intron 40.0%
TGGTTCCATCTCTTCACAAA+CGG - chr1_2:46041941-46041960 Msa0072910:CDS 40.0%
! AAGTACCGTTTGTGAAGAGA+TGG + chr1_2:46041949-46041968 None:intergenic 40.0%
CAAACGGTACTTGTCTATCA+TGG - chr1_2:46041957-46041976 Msa0072910:CDS 40.0%
!! ACTTGTCTATCATGGTGGAT+AGG - chr1_2:46041965-46041984 Msa0072910:CDS 40.0%
!! CTTGTCTATCATGGTGGATA+GGG - chr1_2:46041966-46041985 Msa0072910:CDS 40.0%
GTGTAAACGGCTTCAATAAC+AGG + chr1_2:46042150-46042169 None:intergenic 40.0%
CTCTTTCAGTGCAGTGTAAA+CGG + chr1_2:46042163-46042182 None:intergenic 40.0%
CTTCCAATAGGGCAAAAGAT+CGG + chr1_2:46042202-46042221 None:intergenic 40.0%
TAAAGAGATTGTAGAGTCCG+AGG - chr1_2:46042412-46042431 Msa0072910:intron 40.0%
AAAGAGATTGTAGAGTCCGA+GGG - chr1_2:46042413-46042432 Msa0072910:intron 40.0%
AGCATCAATTCTTTCACCCT+CGG + chr1_2:46042432-46042451 None:intergenic 40.0%
!! TTCTGAATTTTGACAGGCAG+TGG - chr1_2:46042668-46042687 Msa0072910:CDS 40.0%
TTCCACAATGACACGAATTG+TGG - chr1_2:46042931-46042950 Msa0072910:intron 40.0%
GAACCAAAGCTCAACAATTG+AGG + chr1_2:46042991-46043010 None:intergenic 40.0%
ATGTTCCAGGATGGAAGTTA+TGG + chr1_2:46043066-46043085 None:intergenic 40.0%
ATACTGATATGGCATGTTCC+AGG + chr1_2:46043079-46043098 None:intergenic 40.0%
! ACTTAGTGGTTCTACATGTC+AGG - chr1_2:46043182-46043201 Msa0072910:intron 40.0%
CCCTCTTCTTTACGATTTGT+TGG - chr1_2:46043373-46043392 Msa0072910:CDS 40.0%
! GTTTTGCAGTCAAATCGTGT+TGG + chr1_2:46043416-46043435 None:intergenic 40.0%
ATGGAAACTGATTATGCGTC+TGG - chr1_2:46043497-46043516 Msa0072910:intron 40.0%
TGGAAACTGATTATGCGTCT+GGG - chr1_2:46043498-46043517 Msa0072910:intron 40.0%
TTAGCTATGAGGACAAAAGG+GGG + chr1_2:46043596-46043615 None:intergenic 40.0%
ACAGAACAAGAGCTCCATTA+TGG - chr1_2:46043797-46043816 Msa0072910:intron 40.0%
AATGCAGGATTCTTCCTCAT+TGG - chr1_2:46043849-46043868 Msa0072910:intron 40.0%
! TTCTTGAGCTTTTGCCAATG+AGG + chr1_2:46043866-46043885 None:intergenic 40.0%
ATTGGCAAAAGCTCAAGAAG+AGG - chr1_2:46043867-46043886 Msa0072910:intron 40.0%
! AGAGGTAGACAGAGTTTTAC+AGG - chr1_2:46043885-46043904 Msa0072910:intron 40.0%
! GAGGTAGACAGAGTTTTACA+GGG - chr1_2:46043886-46043905 Msa0072910:intron 40.0%
! TAGACAGAGTTTTACAGGGA+AGG - chr1_2:46043890-46043909 Msa0072910:intron 40.0%
TAAGGTTTGGAGACAAGCTA+TGG + chr1_2:46044341-46044360 None:intergenic 40.0%
! TAGCTTGTCTCCAAACCTTA+AGG - chr1_2:46044341-46044360 Msa0072910:intron 40.0%
TCAAATTCCTGATGAGCTTC+CGG - chr1_2:46044615-46044634 Msa0072910:CDS 40.0%
!!! GCATCGATTTTGTAATCACC+CGG + chr1_2:46044637-46044656 None:intergenic 40.0%
GGTGATTACAAAATCGATGC+CGG - chr1_2:46044637-46044656 Msa0072910:CDS 40.0%
GGACAAGCATAAAGATAGGA+CGG + chr1_2:46045087-46045106 None:intergenic 40.0%
CTACGGACAAGCATAAAGAT+AGG + chr1_2:46045091-46045110 None:intergenic 40.0%
CTATCTTTATGCTTGTCCGT+AGG - chr1_2:46045089-46045108 Msa0072910:intron 40.0%
TGTCTGTTTGGGAGAGTTTA+AGG + chr1_2:46045622-46045641 None:intergenic 40.0%
GTGCATGGATGAAACTTAGT+AGG + chr1_2:46045726-46045745 None:intergenic 40.0%
AGATTCATTCCATTTAGCGG+AGG - chr1_2:46045863-46045882 Msa0072910:intron 40.0%
GATTCATTCCATTTAGCGGA+GGG - chr1_2:46045864-46045883 Msa0072910:intron 40.0%
GTCATGCCAATATTCTGATC+AGG + chr1_2:46045980-46045999 None:intergenic 40.0%
CAGAATATTGGCATGACTAC+TGG - chr1_2:46045983-46046002 Msa0072910:CDS 40.0%
TGTACATGAAACTGAGCCAA+CGG - chr1_2:46046300-46046319 Msa0072910:CDS 40.0%
CAGCCTATGTGAAGAAAAAG+TGG + chr1_2:46046342-46046361 None:intergenic 40.0%
GAGAGAGAAAGATGAGAGAG+AGG + chr1_2:46040190-46040209 None:intergenic 45.0%
! GGATAACGTTTTTGTGGGAG+TGG + chr1_2:46040229-46040248 None:intergenic 45.0%
GTTGAGATACGAGGATGAAG+TGG + chr1_2:46040250-46040269 None:intergenic 45.0%
ATCTGGACTTACCCATGAAG+TGG + chr1_2:46040311-46040330 None:intergenic 45.0%
CTTCATGGGTAAGTCCAGAT+TGG - chr1_2:46040311-46040330 Msa0072910:intron 45.0%
GAAAGTGATGTGAGCCAATC+TGG + chr1_2:46040328-46040347 None:intergenic 45.0%
!! TGGTAAAGGTCTTGTTGCTG+AGG - chr1_2:46040570-46040589 Msa0072910:intron 45.0%
CTATTGCTGAAGGACCTCTT+TGG - chr1_2:46040623-46040642 Msa0072910:CDS 45.0%
GCTCGACCCTTAAAATTTCG+AGG + chr1_2:46040801-46040820 None:intergenic 45.0%
!!! CGACACTCATTTTGAAACGG+AGG + chr1_2:46041343-46041362 None:intergenic 45.0%
AGCCAATTGCACACAGGTTA+AGG + chr1_2:46041319-46041338 None:intergenic 45.0%
!!! CGACACTCATTTTGAAACGG+AGG - chr1_2:46041343-46041362 Msa0072910:CDS 45.0%
CATCAATAACTTGAGGGGGT+TGG + chr1_2:46041452-46041471 None:intergenic 45.0%
ATATGTATTAGGCAAGGCGC+AGG - chr1_2:46041914-46041933 Msa0072910:intron 45.0%
TATGTATTAGGCAAGGCGCA+GGG - chr1_2:46041915-46041934 Msa0072910:intron 45.0%
ACGGTACTTGTCTATCATGG+TGG - chr1_2:46041960-46041979 Msa0072910:CDS 45.0%
TGGAACTGCTGTTAACATGG+AGG - chr1_2:46042044-46042063 Msa0072910:intron 45.0%
CGTTTACACTGCACTGAAAG+AGG - chr1_2:46042161-46042180 Msa0072910:intron 45.0%
! CAACCGATCTTTTGCCCTAT+TGG - chr1_2:46042196-46042215 Msa0072910:intron 45.0%
! CGATCTTTTGCCCTATTGGA+AGG - chr1_2:46042200-46042219 Msa0072910:intron 45.0%
ACATCATACCTCTTCTCTGC+TGG + chr1_2:46042504-46042523 None:intergenic 45.0%
! GCTTTTATCGTCGTGTTCTC+TGG - chr1_2:46042548-46042567 Msa0072910:intron 45.0%
! AGCCACAATTCGTGTCATTG+TGG + chr1_2:46042936-46042955 None:intergenic 45.0%
TTCCAGGATGGAAGTTATGG+TGG + chr1_2:46043063-46043082 None:intergenic 45.0%
TGATATGGCATGTTCCAGGA+TGG + chr1_2:46043075-46043094 None:intergenic 45.0%
TAGCTATGAGGACAAAAGGG+GGG + chr1_2:46043595-46043614 None:intergenic 45.0%
!! TCAGCTCTGAGAATGATTCG+AGG - chr1_2:46043686-46043705 Msa0072910:intron 45.0%
ATGGAGCTCTTGTTCTGTGT+TGG + chr1_2:46043795-46043814 None:intergenic 45.0%
CAGGAGGATGTGGATAAAGT+CGG + chr1_2:46043978-46043997 None:intergenic 45.0%
CTTTATCCACATCCTCCTGT+AGG - chr1_2:46043979-46043998 Msa0072910:intron 45.0%
ATAATGGTCCTCCTGATTGC+TGG - chr1_2:46044174-46044193 Msa0072910:CDS 45.0%
CAGAAATTCCAGCAATCAGG+AGG + chr1_2:46044185-46044204 None:intergenic 45.0%
CAAATTCCTGATGAGCTTCC+GGG - chr1_2:46044616-46044635 Msa0072910:CDS 45.0%
! CAGATTTCAGGTGCGCAATT+TGG - chr1_2:46045289-46045308 Msa0072910:intron 45.0%
GTAACTAGCTACAAGAGCAG+AGG + chr1_2:46045360-46045379 None:intergenic 45.0%
CAATTAGGGCCTGTGTAGAT+TGG + chr1_2:46045681-46045700 None:intergenic 45.0%
CAATCTACACAGGCCCTAAT+TGG - chr1_2:46045679-46045698 Msa0072910:intron 45.0%
CGGTGATCAGTTTGCGTTAT+TGG - chr1_2:46045901-46045920 Msa0072910:intron 45.0%
ACAGCACATGAACTTTGAGC+TGG - chr1_2:46045952-46045971 Msa0072910:intron 45.0%
CTGGTCCCTGATCAGAATAT+TGG - chr1_2:46045971-46045990 Msa0072910:intron 45.0%
!! TTAAAGTAAAAATAATAATT+TGG + chr1_2:46041224-46041243 None:intergenic 5.0%
!!! ATTACATTAAATTTTTTAAA+AGG - chr1_2:46042860-46042879 Msa0072910:intron 5.0%
!!! TTACATTAAATTTTTTAAAA+GGG - chr1_2:46042861-46042880 Msa0072910:intron 5.0%
!!! TTTAATTGAATATTTTAAAA+TGG - chr1_2:46044786-46044805 Msa0072910:intron 5.0%
!!! TGGGAGTGGTGTTTTGGAGA+AGG + chr1_2:46040215-46040234 None:intergenic 50.0%
TGCTGAAGGACCTCTTTGGA+CGG - chr1_2:46040627-46040646 Msa0072910:CDS 50.0%
TGACCAACCCTGGCAATTTG+AGG - chr1_2:46040920-46040939 Msa0072910:intron 50.0%
GACCAACCCTGGCAATTTGA+GGG - chr1_2:46040921-46040940 Msa0072910:intron 50.0%
GTCCTTGAAATTGCCAGGGT+CGG + chr1_2:46040957-46040976 None:intergenic 50.0%
CGCTTTAGCCAATTGCACAC+AGG + chr1_2:46041325-46041344 None:intergenic 50.0%
GATAAGGAGTCGAAGGTCCT+GGG + chr1_2:46041404-46041423 None:intergenic 50.0%
GCTAAGGGATAAGGAGTCGA+AGG + chr1_2:46041411-46041430 None:intergenic 50.0%
GAGTTCTTGCATGGAGTTGG+AGG - chr1_2:46041757-46041776 Msa0072910:intron 50.0%
TTTGCTTGCCAGCAGAGAAG+AGG - chr1_2:46042493-46042512 Msa0072910:intron 50.0%
CACCACCATAACTTCCATCC+TGG - chr1_2:46043058-46043077 Msa0072910:intron 50.0%
! TGGTCATGAGACCACTGGTT+CGG - chr1_2:46043251-46043270 Msa0072910:intron 50.0%
TCACAGGGGGAAGACCATAA+TGG + chr1_2:46043814-46043833 None:intergenic 50.0%
TAATCACCCGGAAGCTCATC+AGG + chr1_2:46044625-46044644 None:intergenic 50.0%
CTTCAGCTCTATCCCAAACC+TGG + chr1_2:46045215-46045234 None:intergenic 50.0%
TGATCACCGACACACTTTCG+AGG + chr1_2:46045890-46045909 None:intergenic 50.0%
GTCCCTCAAATTGCCAGGGT+TGG + chr1_2:46040926-46040945 None:intergenic 55.0%
GGGACTAAATTGACCGACCC+TGG - chr1_2:46040941-46040960 Msa0072910:intron 55.0%
GACCGACCCTGGCAATTTCA+AGG - chr1_2:46040952-46040971 Msa0072910:intron 55.0%
GGATAAGGAGTCGAAGGTCC+TGG + chr1_2:46041405-46041424 None:intergenic 55.0%
TTGCATGGAGTTGGAGGTCC+AGG - chr1_2:46041763-46041782 Msa0072910:intron 55.0%
TGCATGGAGTTGGAGGTCCA+GGG - chr1_2:46041764-46041783 Msa0072910:intron 55.0%
CACTGCACTGAAAGAGGCAG+AGG - chr1_2:46042167-46042186 Msa0072910:intron 55.0%
CACTGAAAGAGGCAGAGGCT+CGG - chr1_2:46042172-46042191 Msa0072910:intron 55.0%
GTTGCTGGTCATGAGACCAC+TGG - chr1_2:46043246-46043265 Msa0072910:intron 55.0%
TTTCGAGGCCCTCCGCTAAA+TGG + chr1_2:46045875-46045894 None:intergenic 55.0%
GGCTCAAACCCGGACAAAGG+AGG + chr1_2:46041383-46041402 None:intergenic 60.0%
CTGGGCTCAAACCCGGACAA+AGG + chr1_2:46041386-46041405 None:intergenic 60.0%
CTTTGTCCGGGTTTGAGCCC+AGG - chr1_2:46041384-46041403 Msa0072910:CDS 60.0%
GAAGGTCCTGGGCTCAAACC+CGG + chr1_2:46041393-46041412 None:intergenic 60.0%
GGAGGTCCAGGGTTCAAACC+CGG - chr1_2:46041775-46041794 Msa0072910:intron 60.0%
CTTCGTCCGGGTTTGAACCC+TGG + chr1_2:46041784-46041803 None:intergenic 60.0%
CAGGGTTCAAACCCGGACGA+AGG - chr1_2:46041782-46041801 Msa0072910:intron 60.0%
TCGTCGTGTTCTCTGGCGAC+TGG - chr1_2:46042555-46042574 Msa0072910:intron 60.0%
! CCAAGTCAGCACCGAACCAG+TGG + chr1_2:46043265-46043284 None:intergenic 60.0%
!! CCACTGGTTCGGTGCTGACT+TGG - chr1_2:46043262-46043281 Msa0072910:intron 60.0%
! GGAGGGCCTCGAAAGTGTGT+CGG - chr1_2:46045881-46045900 Msa0072910:intron 60.0%
TTAGGCAAGGCGCAGGGCTG+TGG - chr1_2:46041921-46041940 Msa0072910:CDS 65.0%
Chromosome Type Strat End Strand Name
chr1_2 gene 46040007 46046616 46040007 ID=Msa0072910;Name=Msa0072910
chr1_2 mRNA 46040007 46046616 46040007 ID=Msa0072910-mRNA-1;Parent=Msa0072910;Name=Msa0072910-mRNA-1;_AED=0.07;_eAED=0.07;_QI=150|0.75|0.77|1|1|1|9|308|545
chr1_2 exon 46040007 46040327 46040007 ID=Msa0072910-mRNA-1:exon:13987;Parent=Msa0072910-mRNA-1
chr1_2 exon 46040591 46040758 46040591 ID=Msa0072910-mRNA-1:exon:13986;Parent=Msa0072910-mRNA-1
chr1_2 exon 46041325 46041407 46041325 ID=Msa0072910-mRNA-1:exon:13985;Parent=Msa0072910-mRNA-1
chr1_2 exon 46041918 46042025 46041918 ID=Msa0072910-mRNA-1:exon:13984;Parent=Msa0072910-mRNA-1
chr1_2 exon 46042627 46042767 46042627 ID=Msa0072910-mRNA-1:exon:13983;Parent=Msa0072910-mRNA-1
chr1_2 exon 46043318 46043419 46043318 ID=Msa0072910-mRNA-1:exon:13982;Parent=Msa0072910-mRNA-1
chr1_2 exon 46044109 46044306 46044109 ID=Msa0072910-mRNA-1:exon:13981;Parent=Msa0072910-mRNA-1
chr1_2 exon 46044366 46044698 46044366 ID=Msa0072910-mRNA-1:exon:13980;Parent=Msa0072910-mRNA-1
chr1_2 exon 46045975 46046616 46045975 ID=Msa0072910-mRNA-1:exon:13979;Parent=Msa0072910-mRNA-1
chr1_2 five_prime_UTR 46046467 46046616 46046467 ID=Msa0072910-mRNA-1:five_prime_utr;Parent=Msa0072910-mRNA-1
chr1_2 CDS 46045975 46046466 46045975 ID=Msa0072910-mRNA-1:cds;Parent=Msa0072910-mRNA-1
chr1_2 CDS 46044366 46044698 46044366 ID=Msa0072910-mRNA-1:cds;Parent=Msa0072910-mRNA-1
chr1_2 CDS 46044109 46044306 46044109 ID=Msa0072910-mRNA-1:cds;Parent=Msa0072910-mRNA-1
chr1_2 CDS 46043318 46043419 46043318 ID=Msa0072910-mRNA-1:cds;Parent=Msa0072910-mRNA-1
chr1_2 CDS 46042627 46042767 46042627 ID=Msa0072910-mRNA-1:cds;Parent=Msa0072910-mRNA-1
chr1_2 CDS 46041918 46042025 46041918 ID=Msa0072910-mRNA-1:cds;Parent=Msa0072910-mRNA-1
chr1_2 CDS 46041325 46041407 46041325 ID=Msa0072910-mRNA-1:cds;Parent=Msa0072910-mRNA-1
chr1_2 CDS 46040591 46040758 46040591 ID=Msa0072910-mRNA-1:cds;Parent=Msa0072910-mRNA-1
chr1_2 CDS 46040315 46040327 46040315 ID=Msa0072910-mRNA-1:cds;Parent=Msa0072910-mRNA-1
chr1_2 three_prime_UTR 46040007 46040314 46040007 ID=Msa0072910-mRNA-1:three_prime_utr;Parent=Msa0072910-mRNA-1
Gene Sequence

>Msa0072910

ATGCCATCATGTTCATGTTCATGTTCACTTCCTCTCTCTCATCTTTCTCTCTCTTCCTTCTCCAAAACACCACTCCCACAAAAACGTTATCCACTTCATCCTCGTATCTCAACAAAATCCTCAACCAACAAAAACCCTGAAACAACAAAATCCACTTCATGGGTAAGTCCAGATTGGCTCACATCACTTTCCAAATCCTTAACAACATCAAAAGATGATGATTCCAACATTCCTATAGCAAGTGCTAAGCTTGATGATGTTTCTGATCTTTTGGGTGGTGCTCTTTTTCTTCCTTTGTTTAAATGGATGAATGAGTATGGTCCTATTTATCGTTTAGCTGCTGGTCCTAGAAACTTTGTTGTTGTTAGTGATCCTGCTATTGCTAAACATGTGCTTAAGAATTATGGGAAATATGGTAAAGGTCTTGTTGCTGAGGTTTCTGAGTTTTTGTTTGGGGATGGTTTTGCTATTGCTGAAGGACCTCTTTGGACGGCAAGGCGCAGGGCTGTGGTTCCATCTCTTCACAAACGGTACTTGTCTATCATGGTGGATAGGGTGTTTTGTAAATGTGCAGAGAGATTAGTAGAGAAGCTACAGTCTGATGCAATTAATGGAACTGCTGTTAACATGGAGGACAAGTTTTCTCAGTTAACCCTTGATGTTATTGGTTTATCCGTGTTCAACTACAACTTTGACGCACTGAATTCAGACAGTCCTGTTATTGAAGCCGTTTACACTGCACTGAAAGAGGCAGAGGCTCGGTCAACCGATCTTTTGCCCTATTGGAAGGCAAGTTCTTTTCTCATATCCCATTTGTTATATGAAATTGATTTTCTTTGTAAGATAATTCCAAGACAAATAAAGGCTGAAAATGCTGTTAGTGTTATCAGGAAAACTGTAGAAGACCTTATTGAACAATGTAAAGAGATTGTAGAGTCCGAGGGTGAAAGAATTGATGCTGATGAGTATGTGAATGATGCTGATCCTAGTATTCTTCGATTTTTGCTTGCCAGCAGAGAAGAGGTTTCTAGTGTGCAATTAAGGGATGATCTTTTGTCAATGTTAGTTGCTGGTCATGAGACCACTGGTTCGGTGCTGACTTGGACACTTTATCTTCTAAGTAAGGATTCTTCCTCATTGGCAAAAGCTCAAGAAGAGGTAGACAGAGTTTTACAGGGAAGGCGTCCTACCTATGAAGATATGAAAGATCTTAAGTTCTTGAATCGCTGTATTATCGAGTCACTCCGACTTTATCCACATCCTCCTGTATTGATAAGAAGATCTCAAATTCCTGATGAGCTTCCGGGTGATTACAAAATCGATGCCGGTCAAGATATTATGATTTCTGTGTACAACATACATCATTCTTCTAAGGTTTGGGATAGAGCTGAAGAGTTTTTGCCAGAAAGATTTGATTTGGATGGTCCAGTACCAAATGAAACAAATACAGATTTCAGATTCATTCCATTTAGCGGAGGGCCTCGAAAGTGTGTCGGTGATCAGTTTGCGTTATTGGAAGCTACCGTTGCTCTTGCAGTCTTTTTACAGCACATGAACTTTGAGCTGGTCCCTGATCAGAATATTGGCATGACTACTGGAGCAACAATACATACTACAAATGTAAGGGCTTGTACATGA
Protein sequence

>Msa0072910

MPSCSCSCSLPLSHLSLSSFSKTPLPQKRYPLHPRISTKSSTNKNPETTKSTSWVSPDWLTSLSKSLTTSKDDDSNIPIASAKLDDVSDLLGGALFLPLFKWMNEYGPIYRLAAGPRNFVVVSDPAIAKHVLKNYGKYGKGLVAEVSEFLFGDGFAIAEGPLWTARRRAVVPSLHKRYLSIMVDRVFCKCAERLVEKLQSDAINGTAVNMEDKFSQLTLDVIGLSVFNYNFDALNSDSPVIEAVYTALKEAEARSTDLLPYWKASSFLISHLLYEIDFLCKIIPRQIKAENAVSVIRKTVEDLIEQCKEIVESEGERIDADEYVNDADPSILRFLLASREEVSSVQLRDDLLSMLVAGHETTGSVLTWTLYLLSKDSSSLAKAQEEVDRVLQGRRPTYEDMKDLKFLNRCIIESLRLYPHPPVLIRRSQIPDELPGDYKIDAGQDIMISVYNIHHSSKVWDRAEEFLPERFDLDGPVPNETNTDFRFIPFSGGPRKCVGDQFALLEATVALAVFLQHMNFELVPDQNIGMTTGATIHTTNVRACT*