Alfalfa Gene Editing Database
Alfalfa Gene Editing Database
| Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa0824590 | XP_024633687.2 | 43.976 | 166 | 87 | 3 | 34 | 194 | 3 | 167 | 1.02e-30 | 120 |
| Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|
| Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa0824590 | A0A2Z6NBL0 | 40.602 | 133 | 72 | 5 | 67 | 194 | 4 | 134 | 2.06e-18 | 87.4 |
| Gene ID | Type | Classification |
|---|
| Gene ID | Type | Classification |
|---|
Co-expression Network
| Gene1 | Gene2 | correlation coefficient | p_value | FDR |
|---|---|---|---|---|
| Msa0002240 | Msa0824590 | 0.806929 | 6.479745e-50 | -8.615850e-47 |
| Msa0014710 | Msa0824590 | 0.801224 | 9.959178e-49 | -8.615850e-47 |
| Msa0044000 | Msa0824590 | 0.824974 | 6.033058e-54 | -8.615850e-47 |
| Msa0044330 | Msa0824590 | 0.817571 | 3.077835e-52 | -8.615850e-47 |
| Msa0062860 | Msa0824590 | 0.806089 | 9.742383e-50 | -8.615850e-47 |
| Msa0099210 | Msa0824590 | 0.830090 | 3.570832e-55 | -8.615850e-47 |
| Msa0105070 | Msa0824590 | 0.803035 | 4.224263e-49 | -8.615850e-47 |
| Msa0107580 | Msa0824590 | 0.801922 | 7.163719e-49 | -8.615850e-47 |
| Msa0115270 | Msa0824590 | 0.812550 | 4.007657e-51 | -8.615850e-47 |
| Msa0608160 | Msa0824590 | 0.805274 | 1.444634e-49 | -8.615850e-47 |
| Msa0610800 | Msa0824590 | 0.804545 | 2.052016e-49 | -8.615850e-47 |
| Msa0613340 | Msa0824590 | 0.806611 | 7.562174e-50 | -8.615850e-47 |
| Msa0615010 | Msa0824590 | 0.808002 | 3.836604e-50 | -8.615850e-47 |
| Msa0622170 | Msa0824590 | -0.815384 | 9.502044e-52 | -8.615850e-47 |
| Msa0639610 | Msa0824590 | 0.835688 | 1.450730e-56 | -8.615850e-47 |
| Msa0645300 | Msa0824590 | 0.818005 | 2.455764e-52 | -8.615850e-47 |
| Msa0648080 | Msa0824590 | 0.803998 | 2.666894e-49 | -8.615850e-47 |
| Msa0650630 | Msa0824590 | 0.834591 | 2.743392e-56 | -8.615850e-47 |
| Msa0669410 | Msa0824590 | 0.801983 | 6.959313e-49 | -8.615850e-47 |
| Msa0672690 | Msa0824590 | 0.810436 | 1.153622e-50 | -8.615850e-47 |
| Msa0675690 | Msa0824590 | 0.802638 | 5.103118e-49 | -8.615850e-47 |
| Msa0701010 | Msa0824590 | 0.837999 | 3.730879e-57 | -8.615850e-47 |
| Msa0703780 | Msa0824590 | 0.825192 | 5.360059e-54 | -8.615850e-47 |
| Msa0718100 | Msa0824590 | 0.801879 | 7.310924e-49 | -8.615850e-47 |
| Msa0725850 | Msa0824590 | 0.809836 | 1.554308e-50 | -8.615850e-47 |
| Msa0729800 | Msa0824590 | 0.818956 | 1.495501e-52 | -8.615850e-47 |
| Msa0731940 | Msa0824590 | 0.825280 | 5.109236e-54 | -8.615850e-47 |
| Msa0738500 | Msa0824590 | 0.804836 | 1.784516e-49 | -8.615850e-47 |
| Msa0748970 | Msa0824590 | 0.817354 | 3.444092e-52 | -8.615850e-47 |
| Msa0753720 | Msa0824590 | 0.804566 | 2.031453e-49 | -8.615850e-47 |
| Msa0755180 | Msa0824590 | 0.831007 | 2.130823e-55 | -8.615850e-47 |
| Msa0756460 | Msa0824590 | 0.812685 | 3.743207e-51 | -8.615850e-47 |
| Msa0760130 | Msa0824590 | 0.813461 | 2.529823e-51 | -8.615850e-47 |
| Msa0766630 | Msa0824590 | 0.824211 | 9.126016e-54 | -8.615850e-47 |
| Msa0767760 | Msa0824590 | 0.805375 | 1.376256e-49 | -8.615850e-47 |
| Msa0768290 | Msa0824590 | 0.867946 | 9.401100e-66 | -8.615850e-47 |
| Msa0768310 | Msa0824590 | 0.808020 | 3.802108e-50 | -8.615850e-47 |
| Msa0768370 | Msa0824590 | 0.898660 | 4.269663e-77 | -8.615850e-47 |
| Msa0773180 | Msa0824590 | 0.824932 | 6.172332e-54 | -8.615850e-47 |
| Msa0783160 | Msa0824590 | 0.802153 | 6.420440e-49 | -8.615850e-47 |
| Msa0784290 | Msa0824590 | 0.839309 | 1.711630e-57 | -8.615850e-47 |
| Msa0784300 | Msa0824590 | 0.831364 | 1.740484e-55 | -8.615850e-47 |
| Msa0808010 | Msa0824590 | 0.815412 | 9.368867e-52 | -8.615850e-47 |
| Msa0808020 | Msa0824590 | 0.806469 | 8.102697e-50 | -8.615850e-47 |
| Msa0810220 | Msa0824590 | 0.805932 | 1.051062e-49 | -8.615850e-47 |
| Msa0820850 | Msa0824590 | 0.839024 | 2.029287e-57 | -8.615850e-47 |
| Msa0824590 | Msa0824600 | 0.867321 | 1.492103e-65 | -8.615850e-47 |
| Msa0824590 | Msa0832340 | 0.811688 | 6.177385e-51 | -8.615850e-47 |
| Msa0824590 | Msa0842650 | 0.807714 | 4.416052e-50 | -8.615850e-47 |
| Msa0824590 | Msa0844420 | 0.810053 | 1.395827e-50 | -8.615850e-47 |
| Msa0824590 | Msa0844450 | 0.822914 | 1.835731e-53 | -8.615850e-47 |
| Msa0824590 | Msa0844470 | 0.801417 | 9.092481e-49 | -8.615850e-47 |
| Msa0824590 | Msa0844490 | 0.872597 | 2.814199e-67 | -8.615850e-47 |
| Msa0824590 | Msa0848960 | 0.831821 | 1.343202e-55 | -8.615850e-47 |
| Msa0824590 | Msa0848990 | 0.812491 | 4.127540e-51 | -8.615850e-47 |
| Msa0824590 | Msa0849030 | 0.829690 | 4.471371e-55 | -8.615850e-47 |
| Msa0824590 | Msa0857640 | 0.801446 | 8.969332e-49 | -8.615850e-47 |
| Msa0824590 | Msa0858980 | 0.843669 | 1.215825e-58 | -8.615850e-47 |
| Msa0824590 | Msa0861130 | 0.836625 | 8.386078e-57 | -8.615850e-47 |
| Msa0824590 | Msa0864070 | 0.942326 | 8.769196e-102 | -8.615850e-47 |
| Msa0824590 | Msa0877250 | 0.861930 | 7.254910e-64 | -8.615850e-47 |
| Msa0824590 | Msa0888130 | 0.801519 | 8.666163e-49 | -8.615850e-47 |
| Msa0824590 | Msa0888260 | 0.846209 | 2.507100e-59 | -8.615850e-47 |
| Msa0824590 | Msa0888370 | 0.800015 | 1.757425e-48 | -8.615850e-47 |
| Msa0824590 | Msa0890310 | 0.809469 | 1.863522e-50 | -8.615850e-47 |
| Msa0824590 | Msa0899430 | 0.893526 | 5.790910e-75 | -8.615850e-47 |
| Msa0824590 | Msa0899450 | 0.882085 | 1.399891e-70 | -8.615850e-47 |
| Msa0824590 | Msa0901070 | 0.818453 | 1.945097e-52 | -8.615850e-47 |
| Msa0824590 | Msa0907260 | 0.822418 | 2.394243e-53 | -8.615850e-47 |
| Msa0824590 | Msa0914270 | 0.819812 | 9.539173e-53 | -8.615850e-47 |
| Msa0824590 | Msa0914760 | 0.828209 | 1.021021e-54 | -8.615850e-47 |
| Msa0824590 | Msa0919850 | 0.806950 | 6.411935e-50 | -8.615850e-47 |
| Msa0824590 | Msa0924050 | 0.810111 | 1.356125e-50 | -8.615850e-47 |
| Msa0824590 | Msa0925190 | 0.812713 | 3.690820e-51 | -8.615850e-47 |
| Msa0824590 | Msa0927380 | 0.866077 | 3.711343e-65 | -8.615850e-47 |
| Msa0824590 | Msa0931520 | 0.809845 | 1.547378e-50 | -8.615850e-47 |
| Msa0824590 | Msa0936300 | 0.824343 | 8.495987e-54 | -8.615850e-47 |
| Msa0824590 | Msa0952720 | 0.817647 | 2.958947e-52 | -8.615850e-47 |
| Msa0824590 | Msa0953120 | 0.840705 | 7.401294e-58 | -8.615850e-47 |
| Msa0824590 | Msa0954910 | 0.801641 | 8.180630e-49 | -8.615850e-47 |
| Msa0824590 | Msa0956270 | 0.820966 | 5.187251e-53 | -8.615850e-47 |
| Msa0824590 | Msa0958550 | 0.883482 | 4.323137e-71 | -8.615850e-47 |
| Msa0824590 | Msa0964900 | 0.851066 | 1.130280e-60 | -8.615850e-47 |
| Msa0824590 | Msa0966750 | 0.872911 | 2.210026e-67 | -8.615850e-47 |
| Msa0824590 | Msa0967180 | 0.826195 | 3.099018e-54 | -8.615850e-47 |
| Msa0824590 | Msa0969520 | 0.805352 | 1.391202e-49 | -8.615850e-47 |
| Msa0824590 | Msa0973100 | 0.828634 | 8.063431e-55 | -8.615850e-47 |
| Msa0824590 | Msa0974080 | 0.815814 | 7.622436e-52 | -8.615850e-47 |
| Msa0824590 | Msa0976670 | 0.806804 | 6.886266e-50 | -8.615850e-47 |
| Msa0824590 | Msa0991830 | 0.812572 | 3.963633e-51 | -8.615850e-47 |
| Msa0824590 | Msa0992280 | 0.807654 | 4.547582e-50 | -8.615850e-47 |
| Msa0824590 | Msa0998690 | 0.816732 | 4.750583e-52 | -8.615850e-47 |
| Msa0824590 | Msa0999220 | 0.834704 | 2.570067e-56 | -8.615850e-47 |
| Msa0824590 | Msa1000890 | 0.830052 | 3.647694e-55 | -8.615850e-47 |
| Msa0824590 | Msa1000900 | 0.824438 | 8.069609e-54 | -8.615850e-47 |
| Msa0824590 | Msa1002810 | 0.809339 | 1.987179e-50 | -8.615850e-47 |
| Msa0824590 | Msa1002850 | 0.804103 | 2.537168e-49 | -8.615850e-47 |
| Msa0824590 | Msa1014540 | 0.819431 | 1.165707e-52 | -8.615850e-47 |
| Msa0824590 | Msa1015490 | 0.817495 | 3.201505e-52 | -8.615850e-47 |
| Msa0824590 | Msa1025360 | 0.805565 | 1.255639e-49 | -8.615850e-47 |
| Msa0824590 | Msa1028230 | 0.839875 | 1.219982e-57 | -8.615850e-47 |
| Msa0824590 | Msa1039710 | -0.805595 | 1.237633e-49 | -8.615850e-47 |
| Msa0824590 | Msa1044840 | 0.805520 | 1.283314e-49 | -8.615850e-47 |
| Msa0824590 | Msa1052330 | 0.812036 | 5.189491e-51 | -8.615850e-47 |
| Msa0824590 | Msa1060840 | 0.813533 | 2.439389e-51 | -8.615850e-47 |
| Msa0824590 | Msa1061060 | -0.802347 | 5.858263e-49 | -8.615850e-47 |
| Msa0824590 | Msa1075650 | 0.806400 | 8.379930e-50 | -8.615850e-47 |
| Msa0824590 | Msa1082580 | 0.803739 | 3.018973e-49 | -8.615850e-47 |
| Msa0824590 | Msa1085740 | 0.801541 | 8.577729e-49 | -8.615850e-47 |
| Msa0824590 | Msa1102320 | 0.804289 | 2.320442e-49 | -8.615850e-47 |
| Msa0824590 | Msa1104090 | 0.804787 | 1.826854e-49 | -8.615850e-47 |
| Msa0824590 | Msa1111870 | 0.804906 | 1.724837e-49 | -8.615850e-47 |
| Msa0824590 | Msa1112300 | 0.822726 | 2.030450e-53 | -8.615850e-47 |
| Msa0824590 | Msa1120610 | 0.874028 | 9.296514e-68 | -8.615850e-47 |
| Msa0824590 | Msa1120740 | 0.806401 | 8.376022e-50 | -8.615850e-47 |
| Msa0824590 | Msa1121480 | 0.850474 | 1.658476e-60 | -8.615850e-47 |
| Msa0824590 | Msa1121490 | 0.870439 | 1.457871e-66 | -8.615850e-47 |
| Msa0824590 | Msa1137570 | 0.825063 | 5.750560e-54 | -8.615850e-47 |
| Msa0824590 | Msa1139680 | 0.810282 | 1.245788e-50 | -8.615850e-47 |
| Msa0824590 | Msa1149360 | 0.803084 | 4.127556e-49 | -8.615850e-47 |
| Msa0824590 | Msa1156020 | 0.823424 | 1.395373e-53 | -8.615850e-47 |
| Msa0824590 | Msa1174040 | 0.816520 | 5.300919e-52 | -8.615850e-47 |
| Msa0824590 | Msa1174910 | 0.802954 | 4.390908e-49 | -8.615850e-47 |
| Msa0824590 | Msa1184420 | 0.822643 | 2.122607e-53 | -8.615850e-47 |
| Msa0824590 | Msa1185110 | 0.830472 | 2.880644e-55 | -8.615850e-47 |
| Msa0824590 | Msa1195190 | 0.825224 | 5.265852e-54 | -8.615850e-47 |
| Msa0824590 | Msa1205020 | 0.805354 | 1.389964e-49 | -8.615850e-47 |
| Msa0824590 | Msa1210020 | 0.800669 | 1.292923e-48 | -8.615850e-47 |
| Msa0824590 | Msa1227730 | 0.807142 | 5.840465e-50 | -8.615850e-47 |
| Msa0824590 | Msa1248310 | 0.816981 | 4.178347e-52 | -8.615850e-47 |
| Msa0824590 | Msa1248370 | 0.809518 | 1.819052e-50 | -8.615850e-47 |
| Msa0824590 | Msa1249460 | 0.801265 | 9.767747e-49 | -8.615850e-47 |
| Msa0824590 | Msa1249490 | 0.817488 | 3.212388e-52 | -8.615850e-47 |
| Msa0824590 | Msa1276890 | 0.820225 | 7.674934e-53 | -8.615850e-47 |
| Msa0824590 | Msa1277660 | 0.818074 | 2.369862e-52 | -8.615850e-47 |
| Msa0824590 | Msa1284680 | 0.836827 | 7.449465e-57 | -8.615850e-47 |
| Msa0824590 | Msa1286800 | 0.817545 | 3.120329e-52 | -8.615850e-47 |
| Msa0824590 | Msa1287190 | 0.800197 | 1.613492e-48 | -8.615850e-47 |
| Msa0824590 | Msa1288560 | 0.806627 | 7.505192e-50 | -8.615850e-47 |
| Msa0824590 | Msa1304890 | -0.815949 | 7.114258e-52 | -8.615850e-47 |
| Msa0824590 | Msa1319800 | 0.817738 | 2.822428e-52 | -8.615850e-47 |
| Msa0824590 | Msa1344520 | 0.809906 | 1.501141e-50 | -8.615850e-47 |
| Msa0824590 | Msa1353470 | 0.806688 | 7.286646e-50 | -8.615850e-47 |
| Msa0824590 | Msa1362880 | 0.817133 | 3.861292e-52 | -8.615850e-47 |
| Msa0824590 | Msa1366810 | 0.832875 | 7.362605e-56 | -8.615850e-47 |
| Msa0824590 | Msa1366970 | 0.800378 | 1.482369e-48 | -8.615850e-47 |
| Msa0824590 | Msa1369430 | 0.803474 | 3.427305e-49 | -8.615850e-47 |
| Msa0824590 | Msa1382690 | 0.804413 | 2.185748e-49 | -8.615850e-47 |
| Msa0824590 | Msa1387280 | 0.805051 | 1.608778e-49 | -8.615850e-47 |
| Msa0824590 | Msa1387340 | 0.823868 | 1.098724e-53 | -8.615850e-47 |
| Msa0824590 | Msa1394310 | 0.809865 | 1.531924e-50 | -8.615850e-47 |
| Msa0824590 | Msa1402790 | 0.815920 | 7.220432e-52 | -8.615850e-47 |
| Msa0824590 | Msa1410680 | 0.833557 | 4.979197e-56 | -8.615850e-47 |
| Msa0824590 | Msa1420820 | 0.844481 | 7.363152e-59 | -8.615850e-47 |
| Msa0824590 | Msa1422180 | 0.805532 | 1.275906e-49 | -8.615850e-47 |
| Msa0824590 | Msa1427230 | 0.826835 | 2.180677e-54 | -8.615850e-47 |
| Msa0824590 | Msa1458750 | 0.812584 | 3.939692e-51 | -8.615850e-47 |
| Msa0824590 | Msa1460830 | 0.825524 | 4.471954e-54 | -8.615850e-47 |
| Msa0824590 | Msa1466540 | 0.802230 | 6.190259e-49 | -8.615850e-47 |
| Msa0127800 | Msa0824590 | 0.829804 | 4.193515e-55 | -8.615850e-47 |
| Msa0131770 | Msa0824590 | 0.822781 | 1.971304e-53 | -8.615850e-47 |
| Msa0135660 | Msa0824590 | 0.804238 | 2.377878e-49 | -8.615850e-47 |
| Msa0180500 | Msa0824590 | 0.823178 | 1.593124e-53 | -8.615850e-47 |
| Msa0182740 | Msa0824590 | 0.804720 | 1.886798e-49 | -8.615850e-47 |
| Msa0198910 | Msa0824590 | 0.809944 | 1.472626e-50 | -8.615850e-47 |
| Msa0208090 | Msa0824590 | 0.803463 | 3.445297e-49 | -8.615850e-47 |
| Msa0223010 | Msa0824590 | 0.809672 | 1.685614e-50 | -8.615850e-47 |
| Msa0233300 | Msa0824590 | 0.814196 | 1.742592e-51 | -8.615850e-47 |
| Msa0236510 | Msa0824590 | -0.812733 | 3.653777e-51 | -8.615850e-47 |
| Msa0384890 | Msa0824590 | 0.841754 | 3.922030e-58 | -8.615850e-47 |
| Msa0407960 | Msa0824590 | 0.802093 | 6.607614e-49 | -8.615850e-47 |
| Msa0416650 | Msa0824590 | 0.815901 | 7.289742e-52 | -8.615850e-47 |
| Msa0424320 | Msa0824590 | 0.817882 | 2.618826e-52 | -8.615850e-47 |
| Msa0425790 | Msa0824590 | 0.811355 | 7.298949e-51 | -8.615850e-47 |
| Msa0428000 | Msa0824590 | 0.822519 | 2.268167e-53 | -8.615850e-47 |
| Msa0430420 | Msa0824590 | 0.802241 | 6.158163e-49 | -8.615850e-47 |
| Msa0435230 | Msa0824590 | 0.848522 | 5.807884e-60 | -8.615850e-47 |
| Msa0444130 | Msa0824590 | 0.809235 | 2.091307e-50 | -8.615850e-47 |
| Msa0444750 | Msa0824590 | -0.817188 | 3.753913e-52 | -8.615850e-47 |
| Msa0450000 | Msa0824590 | 0.823312 | 1.482545e-53 | -8.615850e-47 |
| Msa0459260 | Msa0824590 | 0.809957 | 1.463371e-50 | -8.615850e-47 |
| Msa0466120 | Msa0824590 | 0.810521 | 1.106121e-50 | -8.615850e-47 |
| Msa0471380 | Msa0824590 | 0.806590 | 7.641187e-50 | -8.615850e-47 |
| Msa0479340 | Msa0824590 | 0.872480 | 3.079575e-67 | -8.615850e-47 |
| Msa0251320 | Msa0824590 | 0.847000 | 1.524897e-59 | -8.615850e-47 |
| Msa0251640 | Msa0824590 | 0.846530 | 2.049769e-59 | -8.615850e-47 |
| Msa0275020 | Msa0824590 | 0.804524 | 2.072877e-49 | -8.615850e-47 |
| Msa0278110 | Msa0824590 | 0.818074 | 2.370188e-52 | -8.615850e-47 |
| Msa0278190 | Msa0824590 | 0.840428 | 8.749007e-58 | -8.615850e-47 |
| Msa0290870 | Msa0824590 | 0.813529 | 2.444131e-51 | -8.615850e-47 |
| Msa0305190 | Msa0824590 | 0.815641 | 8.329984e-52 | -8.615850e-47 |
| Msa0307540 | Msa0824590 | 0.819555 | 1.092237e-52 | -8.615850e-47 |
| Msa0315940 | Msa0824590 | 0.802467 | 5.534710e-49 | -8.615850e-47 |
| Msa0317290 | Msa0824590 | 0.801038 | 1.087156e-48 | -8.615850e-47 |
| Msa0319170 | Msa0824590 | 0.809017 | 2.329058e-50 | -8.615850e-47 |
| Msa0322360 | Msa0824590 | 0.832298 | 1.023955e-55 | -8.615850e-47 |
| Msa0339620 | Msa0824590 | 0.812917 | 3.330823e-51 | -8.615850e-47 |
| Msa0340450 | Msa0824590 | 0.802092 | 6.609809e-49 | -8.615850e-47 |
| Msa0342750 | Msa0824590 | 0.823513 | 1.330427e-53 | -8.615850e-47 |
| Msa0362000 | Msa0824590 | 0.800971 | 1.122226e-48 | -8.615850e-47 |
| Msa0490140 | Msa0824590 | 0.812300 | 4.545110e-51 | -8.615850e-47 |
| Msa0493000 | Msa0824590 | 0.823007 | 1.745793e-53 | -8.615850e-47 |
| Msa0512750 | Msa0824590 | 0.811965 | 5.375936e-51 | -8.615850e-47 |
| Msa0516750 | Msa0824590 | 0.802124 | 6.509025e-49 | -8.615850e-47 |
| Msa0523940 | Msa0824590 | 0.834947 | 2.231742e-56 | -8.615850e-47 |
| Msa0526070 | Msa0824590 | -0.806666 | 7.364347e-50 | -8.615850e-47 |
| Msa0529040 | Msa0824590 | 0.824624 | 7.299086e-54 | -8.615850e-47 |
| Msa0535630 | Msa0824590 | 0.812161 | 4.873867e-51 | -8.615850e-47 |
| Msa0545700 | Msa0824590 | 0.848745 | 5.038806e-60 | -8.615850e-47 |
| Msa0585230 | Msa0824590 | 0.833185 | 6.167754e-56 | -8.615850e-47 |
| Msa0594560 | Msa0824590 | 0.817847 | 2.667306e-52 | -8.615850e-47 |
| Msa0598990 | Msa0824590 | 0.819419 | 1.173307e-52 | -8.615850e-47 |
PPI
| Gene1 | Gene2 | Type |
|---|
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa0824590 | MtrunA17_Chr2g0326101 | 43.011 | 93 | 46 | 2 | 108 | 194 | 85 | 176 | 4.39e-15 | 72.8 |
| Msa0824590 | MtrunA17_Chr2g0319901 | 41.758 | 91 | 48 | 2 | 108 | 194 | 80 | 169 | 1.03e-13 | 67.0 |
| Msa0824590 | MtrunA17_Chr2g0333201 | 32.800 | 125 | 68 | 3 | 85 | 194 | 55 | 178 | 9.80e-11 | 58.9 |
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|
Find 49 sgRNAs with CRISPR-Local
Find 130 sgRNAs with CRISPR-GE
CRISPR-Local
| sgRNA_sequence | on_target_score | Position | Region |
|---|---|---|---|
| TTGCATCTCCTCTTTCTGTT+TGG | 0.302661 | 5_3:-64022536 | None:intergenic |
| TATTGCCAAAGTGGCAGATT+TGG | 0.339409 | 5_3:-64022947 | None:intergenic |
| GCTGTTTGGGAACTAGTTAA+TGG | 0.356582 | 5_3:+64023024 | Msa0824590:CDS |
| CAAGATTGAGATGGCTGTTT+GGG | 0.360205 | 5_3:+64023011 | Msa0824590:CDS |
| ACAAGGGAGATCCTTAAAAT+AGG | 0.388384 | 5_3:-64022573 | None:intergenic |
| CCACAGTGTTTACTAATAGA+TGG | 0.393695 | 5_3:+64023112 | Msa0824590:CDS |
| CCAAAGTGGCAGATTTGGTT+AGG | 0.395318 | 5_3:-64022942 | None:intergenic |
| TCCTAGCTAGAAAGGTGATA+TGG | 0.410532 | 5_3:-64023056 | None:intergenic |
| GTAAGTCCGCAATAATGTTC+AGG | 0.429739 | 5_3:-64022877 | None:intergenic |
| TCTCCTCTTTCTGTTTGGAC+TGG | 0.435108 | 5_3:-64022531 | None:intergenic |
| TCAAGATTGAGATGGCTGTT+TGG | 0.443129 | 5_3:+64023010 | Msa0824590:CDS |
| CCTAACCAAATCTGCCACTT+TGG | 0.457674 | 5_3:+64022942 | Msa0824590:CDS |
| GAATCAAAAGTAGCGATGTT+TGG | 0.459781 | 5_3:+64023157 | Msa0824590:CDS |
| CCATCTCAATCTTGACAAAT+CGG | 0.460947 | 5_3:-64023002 | None:intergenic |
| TCCTTAAAATAGGTCACGTT+GGG | 0.461926 | 5_3:-64022563 | None:intergenic |
| AGATGGGAAAGAGGCTTACA+AGG | 0.476043 | 5_3:-64022590 | None:intergenic |
| ATTGCGGACTTACACCTGTT+CGG | 0.478097 | 5_3:+64022887 | Msa0824590:CDS |
| AGGATCGTCGATCAAACGTT+TGG | 0.485490 | 5_3:-64022854 | None:intergenic |
| ATAGATGGATGAGGAAGGTT+CGG | 0.487733 | 5_3:+64023127 | Msa0824590:CDS |
| TCAAGATTCCCTCTTCTAGC+AGG | 0.492324 | 5_3:-64022683 | None:intergenic |
| ACCATATCACCTTTCTAGCT+AGG | 0.492797 | 5_3:+64023055 | Msa0824590:CDS |
| TTTCTCCTCCTCGGAAAGAT+GGG | 0.496979 | 5_3:-64022606 | None:intergenic |
| CTAGAAAGGTGATATGGTAA+AGG | 0.506004 | 5_3:-64023050 | None:intergenic |
| ATACCAGTCCAAACAGAAAG+AGG | 0.508910 | 5_3:+64022528 | Msa0824590:CDS |
| GAAATTCGCTATTGCCAAAG+TGG | 0.531967 | 5_3:-64022956 | None:intergenic |
| TTTGGTTAGGTTGCGAAACA+TGG | 0.536494 | 5_3:-64022929 | None:intergenic |
| AGCAGCATTCCTAGCTAGAA+AGG | 0.537666 | 5_3:-64023064 | None:intergenic |
| TCCTCGGAAAGATGGGAAAG+AGG | 0.544768 | 5_3:-64022599 | None:intergenic |
| GCCTCTTTCCCATCTTTCCG+AGG | 0.552339 | 5_3:+64022598 | Msa0824590:CDS |
| ATGAGGAAGGTTCGGAAAGT+CGG | 0.565265 | 5_3:+64023135 | Msa0824590:CDS |
| GTTAGGTTGCGAAACATGGA+AGG | 0.572622 | 5_3:-64022925 | None:intergenic |
| GCTGCTGCTGATACTCTCGC+TGG | 0.578393 | 5_3:+64022395 | Msa0824590:CDS |
| ATCCTTAAAATAGGTCACGT+TGG | 0.584622 | 5_3:-64022564 | None:intergenic |
| GAGTTGCCGCCTGCTAGAAG+AGG | 0.597451 | 5_3:+64022674 | Msa0824590:CDS |
| CGTACATCTATTGCATGTAG+AGG | 0.602395 | 5_3:-64022710 | None:intergenic |
| CCGATTTGTCAAGATTGAGA+TGG | 0.607654 | 5_3:+64023002 | Msa0824590:CDS |
| TCTTTCCCATCTTTCCGAGG+AGG | 0.614625 | 5_3:+64022601 | Msa0824590:CDS |
| AGTTGCCGCCTGCTAGAAGA+GGG | 0.618271 | 5_3:+64022675 | Msa0824590:CDS |
| AGATTCCCTCTTCTAGCAGG+CGG | 0.619170 | 5_3:-64022680 | None:intergenic |
| TGTTTACTAATAGATGGATG+AGG | 0.629998 | 5_3:+64023118 | Msa0824590:CDS |
| TACTAATAGATGGATGAGGA+AGG | 0.630665 | 5_3:+64023122 | Msa0824590:CDS |
| ACATCTATTGCATGTAGAGG+AGG | 0.639058 | 5_3:-64022707 | None:intergenic |
| GGAGGAGAAAACTTACATTG+AGG | 0.640254 | 5_3:+64022619 | Msa0824590:CDS |
| GATGGGAAAGAGGCTTACAA+GGG | 0.645216 | 5_3:-64022589 | None:intergenic |
| TCAGCAGCAGCAGAAGACGA+AGG | 0.668748 | 5_3:-64022383 | None:intergenic |
| AGTCCGCAATAATGTTCAGG+AGG | 0.674937 | 5_3:-64022874 | None:intergenic |
| GATCCTCCTGAACATTATTG+CGG | 0.679290 | 5_3:+64022871 | Msa0824590:CDS |
| GCAGAAGACGAAGGATCACG+TGG | 0.682385 | 5_3:-64022374 | None:intergenic |
| CCATCTATTAGTAAACACTG+TGG | 0.792095 | 5_3:-64023112 | None:intergenic |
CRISPR-GE
| badsite warning | sgRNA_sequence | Strand | Position | Region | GC_content |
|---|---|---|---|---|---|
| !! | AATTATATATAATAATATTA+TGG | - | chr5_3:64022447-64022466 | None:intergenic | 0.0% |
| !! | AATTATATATAATAATATTA+TGG | - | chr5_3:64022447-64022466 | None:intergenic | 0.0% |
| !! | GAACATATGTTAAATGAATA+AGG | - | chr5_3:64022425-64022444 | None:intergenic | 20.0% |
| !!! | AAACCTTTTTTCTTCTTTTT+TGG | + | chr5_3:64022803-64022822 | Msa0824590:intron | 20.0% |
| !! | AAACCAAAAAAGAAGAAAAA+AGG | - | chr5_3:64022809-64022828 | None:intergenic | 20.0% |
| !!! | TTTTTTCTTCTTTTTTGGTT+TGG | + | chr5_3:64022808-64022827 | Msa0824590:intron | 20.0% |
| !! | GAACATATGTTAAATGAATA+AGG | - | chr5_3:64022425-64022444 | None:intergenic | 20.0% |
| !!! | AAACCTTTTTTCTTCTTTTT+TGG | + | chr5_3:64022803-64022822 | Msa0824590:intron | 20.0% |
| !! | AAACCAAAAAAGAAGAAAAA+AGG | - | chr5_3:64022809-64022828 | None:intergenic | 20.0% |
| !!! | TTTTTTCTTCTTTTTTGGTT+TGG | + | chr5_3:64022808-64022827 | Msa0824590:intron | 20.0% |
| AAAAGGAAAAAGTTAGTCGA+GGG | - | chr5_3:64022753-64022772 | None:intergenic | 30.0% | |
| TAAAAGGAAAAAGTTAGTCG+AGG | - | chr5_3:64022754-64022773 | None:intergenic | 30.0% | |
| ACCTGTTCGGAATTTAAAAA+AGG | + | chr5_3:64022900-64022919 | Msa0824590:CDS | 30.0% | |
| !!! | TCCTTTTTTAAATTCCGAAC+AGG | - | chr5_3:64022904-64022923 | None:intergenic | 30.0% |
| TGTTTACTAATAGATGGATG+AGG | + | chr5_3:64023118-64023137 | Msa0824590:CDS | 30.0% | |
| AAAAGGAAAAAGTTAGTCGA+GGG | - | chr5_3:64022753-64022772 | None:intergenic | 30.0% | |
| TAAAAGGAAAAAGTTAGTCG+AGG | - | chr5_3:64022754-64022773 | None:intergenic | 30.0% | |
| ACCTGTTCGGAATTTAAAAA+AGG | + | chr5_3:64022900-64022919 | Msa0824590:CDS | 30.0% | |
| !!! | TCCTTTTTTAAATTCCGAAC+AGG | - | chr5_3:64022904-64022923 | None:intergenic | 30.0% |
| TGTTTACTAATAGATGGATG+AGG | + | chr5_3:64023118-64023137 | Msa0824590:CDS | 30.0% | |
| TCCTTAAAATAGGTCACGTT+GGG | - | chr5_3:64022566-64022585 | None:intergenic | 35.0% | |
| ATCCTTAAAATAGGTCACGT+TGG | - | chr5_3:64022567-64022586 | None:intergenic | 35.0% | |
| ACAAGGGAGATCCTTAAAAT+AGG | - | chr5_3:64022576-64022595 | None:intergenic | 35.0% | |
| ! | AATGTAAGTTTTCTCCTCCT+CGG | - | chr5_3:64022618-64022637 | None:intergenic | 35.0% |
| GAACGAACATCGATCATAAA+AGG | - | chr5_3:64022770-64022789 | None:intergenic | 35.0% | |
| CCATCTCAATCTTGACAAAT+CGG | - | chr5_3:64023005-64023024 | None:intergenic | 35.0% | |
| CTAGAAAGGTGATATGGTAA+AGG | - | chr5_3:64023053-64023072 | None:intergenic | 35.0% | |
| CCATCTATTAGTAAACACTG+TGG | - | chr5_3:64023115-64023134 | None:intergenic | 35.0% | |
| CCACAGTGTTTACTAATAGA+TGG | + | chr5_3:64023112-64023131 | Msa0824590:CDS | 35.0% | |
| TACTAATAGATGGATGAGGA+AGG | + | chr5_3:64023122-64023141 | Msa0824590:CDS | 35.0% | |
| GAATCAAAAGTAGCGATGTT+TGG | + | chr5_3:64023157-64023176 | Msa0824590:CDS | 35.0% | |
| TCCTTAAAATAGGTCACGTT+GGG | - | chr5_3:64022566-64022585 | None:intergenic | 35.0% | |
| ATCCTTAAAATAGGTCACGT+TGG | - | chr5_3:64022567-64022586 | None:intergenic | 35.0% | |
| ACAAGGGAGATCCTTAAAAT+AGG | - | chr5_3:64022576-64022595 | None:intergenic | 35.0% | |
| ! | AATGTAAGTTTTCTCCTCCT+CGG | - | chr5_3:64022618-64022637 | None:intergenic | 35.0% |
| GAACGAACATCGATCATAAA+AGG | - | chr5_3:64022770-64022789 | None:intergenic | 35.0% | |
| CCATCTCAATCTTGACAAAT+CGG | - | chr5_3:64023005-64023024 | None:intergenic | 35.0% | |
| CTAGAAAGGTGATATGGTAA+AGG | - | chr5_3:64023053-64023072 | None:intergenic | 35.0% | |
| CCATCTATTAGTAAACACTG+TGG | - | chr5_3:64023115-64023134 | None:intergenic | 35.0% | |
| CCACAGTGTTTACTAATAGA+TGG | + | chr5_3:64023112-64023131 | Msa0824590:CDS | 35.0% | |
| TACTAATAGATGGATGAGGA+AGG | + | chr5_3:64023122-64023141 | Msa0824590:CDS | 35.0% | |
| GAATCAAAAGTAGCGATGTT+TGG | + | chr5_3:64023157-64023176 | Msa0824590:CDS | 35.0% | |
| ATACCAGTCCAAACAGAAAG+AGG | + | chr5_3:64022528-64022547 | Msa0824590:CDS | 40.0% | |
| TTGCATCTCCTCTTTCTGTT+TGG | - | chr5_3:64022539-64022558 | None:intergenic | 40.0% | |
| GGAGGAGAAAACTTACATTG+AGG | + | chr5_3:64022619-64022638 | Msa0824590:CDS | 40.0% | |
| ACATCTATTGCATGTAGAGG+AGG | - | chr5_3:64022710-64022729 | None:intergenic | 40.0% | |
| CGTACATCTATTGCATGTAG+AGG | - | chr5_3:64022713-64022732 | None:intergenic | 40.0% | |
| TGGCATCAAAAACCTGTTGA+GGG | - | chr5_3:64022837-64022856 | None:intergenic | 40.0% | |
| TTGGCATCAAAAACCTGTTG+AGG | - | chr5_3:64022838-64022857 | None:intergenic | 40.0% | |
| GATCCTCCTGAACATTATTG+CGG | + | chr5_3:64022871-64022890 | Msa0824590:CDS | 40.0% | |
| GTAAGTCCGCAATAATGTTC+AGG | - | chr5_3:64022880-64022899 | None:intergenic | 40.0% | |
| ! | TTTGGTTAGGTTGCGAAACA+TGG | - | chr5_3:64022932-64022951 | None:intergenic | 40.0% |
| TATTGCCAAAGTGGCAGATT+TGG | - | chr5_3:64022950-64022969 | None:intergenic | 40.0% | |
| GAAATTCGCTATTGCCAAAG+TGG | - | chr5_3:64022959-64022978 | None:intergenic | 40.0% | |
| ! | CCGATTTGTCAAGATTGAGA+TGG | + | chr5_3:64023002-64023021 | Msa0824590:CDS | 40.0% |
| TCAAGATTGAGATGGCTGTT+TGG | + | chr5_3:64023010-64023029 | Msa0824590:CDS | 40.0% | |
| CAAGATTGAGATGGCTGTTT+GGG | + | chr5_3:64023011-64023030 | Msa0824590:CDS | 40.0% | |
| GCTGTTTGGGAACTAGTTAA+TGG | + | chr5_3:64023024-64023043 | Msa0824590:CDS | 40.0% | |
| !! | ACCATATCACCTTTCTAGCT+AGG | + | chr5_3:64023055-64023074 | Msa0824590:CDS | 40.0% |
| TCCTAGCTAGAAAGGTGATA+TGG | - | chr5_3:64023059-64023078 | None:intergenic | 40.0% | |
| ATAGATGGATGAGGAAGGTT+CGG | + | chr5_3:64023127-64023146 | Msa0824590:CDS | 40.0% | |
| ATACCAGTCCAAACAGAAAG+AGG | + | chr5_3:64022528-64022547 | Msa0824590:CDS | 40.0% | |
| TTGCATCTCCTCTTTCTGTT+TGG | - | chr5_3:64022539-64022558 | None:intergenic | 40.0% | |
| GGAGGAGAAAACTTACATTG+AGG | + | chr5_3:64022619-64022638 | Msa0824590:CDS | 40.0% | |
| ACATCTATTGCATGTAGAGG+AGG | - | chr5_3:64022710-64022729 | None:intergenic | 40.0% | |
| CGTACATCTATTGCATGTAG+AGG | - | chr5_3:64022713-64022732 | None:intergenic | 40.0% | |
| TGGCATCAAAAACCTGTTGA+GGG | - | chr5_3:64022837-64022856 | None:intergenic | 40.0% | |
| TTGGCATCAAAAACCTGTTG+AGG | - | chr5_3:64022838-64022857 | None:intergenic | 40.0% | |
| GATCCTCCTGAACATTATTG+CGG | + | chr5_3:64022871-64022890 | Msa0824590:CDS | 40.0% | |
| GTAAGTCCGCAATAATGTTC+AGG | - | chr5_3:64022880-64022899 | None:intergenic | 40.0% | |
| ! | TTTGGTTAGGTTGCGAAACA+TGG | - | chr5_3:64022932-64022951 | None:intergenic | 40.0% |
| TATTGCCAAAGTGGCAGATT+TGG | - | chr5_3:64022950-64022969 | None:intergenic | 40.0% | |
| GAAATTCGCTATTGCCAAAG+TGG | - | chr5_3:64022959-64022978 | None:intergenic | 40.0% | |
| ! | CCGATTTGTCAAGATTGAGA+TGG | + | chr5_3:64023002-64023021 | Msa0824590:CDS | 40.0% |
| TCAAGATTGAGATGGCTGTT+TGG | + | chr5_3:64023010-64023029 | Msa0824590:CDS | 40.0% | |
| CAAGATTGAGATGGCTGTTT+GGG | + | chr5_3:64023011-64023030 | Msa0824590:CDS | 40.0% | |
| GCTGTTTGGGAACTAGTTAA+TGG | + | chr5_3:64023024-64023043 | Msa0824590:CDS | 40.0% | |
| !! | ACCATATCACCTTTCTAGCT+AGG | + | chr5_3:64023055-64023074 | Msa0824590:CDS | 40.0% |
| TCCTAGCTAGAAAGGTGATA+TGG | - | chr5_3:64023059-64023078 | None:intergenic | 40.0% | |
| ATAGATGGATGAGGAAGGTT+CGG | + | chr5_3:64023127-64023146 | Msa0824590:CDS | 40.0% | |
| TCTCCTCTTTCTGTTTGGAC+TGG | - | chr5_3:64022534-64022553 | None:intergenic | 45.0% | |
| ! | GCCCAACGTGACCTATTTTA+AGG | + | chr5_3:64022562-64022581 | Msa0824590:CDS | 45.0% |
| GATGGGAAAGAGGCTTACAA+GGG | - | chr5_3:64022592-64022611 | None:intergenic | 45.0% | |
| AGATGGGAAAGAGGCTTACA+AGG | - | chr5_3:64022593-64022612 | None:intergenic | 45.0% | |
| TTTCTCCTCCTCGGAAAGAT+GGG | - | chr5_3:64022609-64022628 | None:intergenic | 45.0% | |
| ! | TTTTCTCCTCCTCGGAAAGA+TGG | - | chr5_3:64022610-64022629 | None:intergenic | 45.0% |
| TCAAGATTCCCTCTTCTAGC+AGG | - | chr5_3:64022686-64022705 | None:intergenic | 45.0% | |
| !! | TTGGTTTGGTAACCCTCAAC+AGG | + | chr5_3:64022822-64022841 | Msa0824590:intron | 45.0% |
| AGGATCGTCGATCAAACGTT+TGG | - | chr5_3:64022857-64022876 | None:intergenic | 45.0% | |
| AGTCCGCAATAATGTTCAGG+AGG | - | chr5_3:64022877-64022896 | None:intergenic | 45.0% | |
| ATTGCGGACTTACACCTGTT+CGG | + | chr5_3:64022887-64022906 | Msa0824590:CDS | 45.0% | |
| ! | GTTAGGTTGCGAAACATGGA+AGG | - | chr5_3:64022928-64022947 | None:intergenic | 45.0% |
| ! | CCAAAGTGGCAGATTTGGTT+AGG | - | chr5_3:64022945-64022964 | None:intergenic | 45.0% |
| ! | CCTAACCAAATCTGCCACTT+TGG | + | chr5_3:64022942-64022961 | Msa0824590:CDS | 45.0% |
| AGCAGCATTCCTAGCTAGAA+AGG | - | chr5_3:64023067-64023086 | None:intergenic | 45.0% | |
| ATGAGGAAGGTTCGGAAAGT+CGG | + | chr5_3:64023135-64023154 | Msa0824590:CDS | 45.0% | |
| TCTCCTCTTTCTGTTTGGAC+TGG | - | chr5_3:64022534-64022553 | None:intergenic | 45.0% | |
| ! | GCCCAACGTGACCTATTTTA+AGG | + | chr5_3:64022562-64022581 | Msa0824590:CDS | 45.0% |
| GATGGGAAAGAGGCTTACAA+GGG | - | chr5_3:64022592-64022611 | None:intergenic | 45.0% | |
| AGATGGGAAAGAGGCTTACA+AGG | - | chr5_3:64022593-64022612 | None:intergenic | 45.0% | |
| TTTCTCCTCCTCGGAAAGAT+GGG | - | chr5_3:64022609-64022628 | None:intergenic | 45.0% | |
| ! | TTTTCTCCTCCTCGGAAAGA+TGG | - | chr5_3:64022610-64022629 | None:intergenic | 45.0% |
| TCAAGATTCCCTCTTCTAGC+AGG | - | chr5_3:64022686-64022705 | None:intergenic | 45.0% | |
| !! | TTGGTTTGGTAACCCTCAAC+AGG | + | chr5_3:64022822-64022841 | Msa0824590:intron | 45.0% |
| AGGATCGTCGATCAAACGTT+TGG | - | chr5_3:64022857-64022876 | None:intergenic | 45.0% | |
| AGTCCGCAATAATGTTCAGG+AGG | - | chr5_3:64022877-64022896 | None:intergenic | 45.0% | |
| ATTGCGGACTTACACCTGTT+CGG | + | chr5_3:64022887-64022906 | Msa0824590:CDS | 45.0% | |
| ! | GTTAGGTTGCGAAACATGGA+AGG | - | chr5_3:64022928-64022947 | None:intergenic | 45.0% |
| ! | CCAAAGTGGCAGATTTGGTT+AGG | - | chr5_3:64022945-64022964 | None:intergenic | 45.0% |
| ! | CCTAACCAAATCTGCCACTT+TGG | + | chr5_3:64022942-64022961 | Msa0824590:CDS | 45.0% |
| AGCAGCATTCCTAGCTAGAA+AGG | - | chr5_3:64023067-64023086 | None:intergenic | 45.0% | |
| ATGAGGAAGGTTCGGAAAGT+CGG | + | chr5_3:64023135-64023154 | Msa0824590:CDS | 45.0% | |
| TCCTCGGAAAGATGGGAAAG+AGG | - | chr5_3:64022602-64022621 | None:intergenic | 50.0% | |
| TCTTTCCCATCTTTCCGAGG+AGG | + | chr5_3:64022601-64022620 | Msa0824590:CDS | 50.0% | |
| AGATTCCCTCTTCTAGCAGG+CGG | - | chr5_3:64022683-64022702 | None:intergenic | 50.0% | |
| TCCTCGGAAAGATGGGAAAG+AGG | - | chr5_3:64022602-64022621 | None:intergenic | 50.0% | |
| TCTTTCCCATCTTTCCGAGG+AGG | + | chr5_3:64022601-64022620 | Msa0824590:CDS | 50.0% | |
| AGATTCCCTCTTCTAGCAGG+CGG | - | chr5_3:64022683-64022702 | None:intergenic | 50.0% | |
| GCAGAAGACGAAGGATCACG+TGG | - | chr5_3:64022377-64022396 | None:intergenic | 55.0% | |
| TCAGCAGCAGCAGAAGACGA+AGG | - | chr5_3:64022386-64022405 | None:intergenic | 55.0% | |
| GCCTCTTTCCCATCTTTCCG+AGG | + | chr5_3:64022598-64022617 | Msa0824590:CDS | 55.0% | |
| AGTTGCCGCCTGCTAGAAGA+GGG | + | chr5_3:64022675-64022694 | Msa0824590:CDS | 55.0% | |
| GCAGAAGACGAAGGATCACG+TGG | - | chr5_3:64022377-64022396 | None:intergenic | 55.0% | |
| TCAGCAGCAGCAGAAGACGA+AGG | - | chr5_3:64022386-64022405 | None:intergenic | 55.0% | |
| GCCTCTTTCCCATCTTTCCG+AGG | + | chr5_3:64022598-64022617 | Msa0824590:CDS | 55.0% | |
| AGTTGCCGCCTGCTAGAAGA+GGG | + | chr5_3:64022675-64022694 | Msa0824590:CDS | 55.0% | |
| GCTGCTGCTGATACTCTCGC+TGG | + | chr5_3:64022395-64022414 | Msa0824590:CDS | 60.0% | |
| GAGTTGCCGCCTGCTAGAAG+AGG | + | chr5_3:64022674-64022693 | Msa0824590:CDS | 60.0% | |
| GCTGCTGCTGATACTCTCGC+TGG | + | chr5_3:64022395-64022414 | Msa0824590:CDS | 60.0% | |
| GAGTTGCCGCCTGCTAGAAG+AGG | + | chr5_3:64022674-64022693 | Msa0824590:CDS | 60.0% |
| Chromosome | Type | Strat | End | Strand | Name |
|---|---|---|---|---|---|
| chr5_3 | gene | 64022371 | 64023182 | 64022371 | ID=Msa0824590;Name=Msa0824590 |
| chr5_3 | mRNA | 64022371 | 64023182 | 64022371 | ID=Msa0824590-mRNA-1;Parent=Msa0824590;Name=Msa0824590-mRNA-1;_AED=0.51;_eAED=0.51;_QI=0|0|0|0.33|1|1|3|0|194 |
| chr5_3 | exon | 64022371 | 64022416 | 64022371 | ID=Msa0824590-mRNA-1:exon:19971;Parent=Msa0824590-mRNA-1 |
| chr5_3 | exon | 64022528 | 64022727 | 64022528 | ID=Msa0824590-mRNA-1:exon:19972;Parent=Msa0824590-mRNA-1 |
| chr5_3 | exon | 64022844 | 64023182 | 64022844 | ID=Msa0824590-mRNA-1:exon:19973;Parent=Msa0824590-mRNA-1 |
| chr5_3 | CDS | 64022371 | 64022416 | 64022371 | ID=Msa0824590-mRNA-1:cds;Parent=Msa0824590-mRNA-1 |
| chr5_3 | CDS | 64022528 | 64022727 | 64022528 | ID=Msa0824590-mRNA-1:cds;Parent=Msa0824590-mRNA-1 |
| chr5_3 | CDS | 64022844 | 64023182 | 64022844 | ID=Msa0824590-mRNA-1:cds;Parent=Msa0824590-mRNA-1 |
| Gene Sequence |
| Protein sequence |
