AlfalfaGEDB | Msa0639270

M. sativa cultivar zhongmu-4 / Msa0639270

KEGG: -
GO: GO:0003674 GO:0003700 GO:0006355 GO:0007275 GO:0008150 GO:0009888 GO:0009889 GO:0010087 GO:0010089 GO:0010468 GO:0010556 GO:0010941 GO:0019219 GO:0019222 GO:0031323 GO:0031326 GO:0032501 GO:0032502 GO:0043067 GO:0048367 GO:0048731 GO:0048856 GO:0050789 GO:0050794 GO:0051171 GO:0051252 GO:0060255 GO:0065007 GO:0080090 GO:0140110 GO:1903506 GO:2000112 GO:2001141
PFAM: PF02365.18

Nr:

Query id	Subject id	identity %	alignment length	mis matches	gap openings	q. start	q. end	s. start	s. end	e-value	bit score
Msa0639270	QDC33491.1	100.000	192	0	0	1	192	1	192	1.73e-141	402

Swissprot:

Query id	Subject id	identity %	alignment length	mis matches	gap openings	q. start	q. end	s. start	s. end	e-value	bit score
Msa0639270	sp\|Q8GWK6\|NC104_ARATH	66.492	191	51	3	10	191	1	187	5.33e-83	246

Trembl:

Query id	Subject id	identity %	alignment length	mis matches	gap openings	q. start	q. end	s. start	s. end	e-value	bit score
Msa0639270	A0A4Y5ULN3	100.000	192	0	0	1	192	1	192	8.26e-142	402

TFs/TRs:

Gene ID	Type	Classification
Msa0639270	TF	NAC

Protein Kinases:

Gene ID	Type	Classification

Network:

Co-expression Network

Gene1	Gene2	correlation coefficient	p_value	FDR
Msa0026450	Msa0639270	0.820480	6.709512e-53	-8.615850e-47
Msa0036140	Msa0639270	0.809978	1.448004e-50	-8.615850e-47
Msa0058600	Msa0639270	0.803212	3.882274e-49	-8.615850e-47
Msa0080090	Msa0639270	0.801883	7.296541e-49	-8.615850e-47
Msa0614610	Msa0639270	0.929625	5.311771e-93	-8.615850e-47
Msa0637900	Msa0639270	0.800050	1.728406e-48	-8.615850e-47
Msa0639270	Msa0697880	0.921649	2.728663e-88	-8.615850e-47
Msa0639270	Msa0704920	0.834825	2.395437e-56	-8.615850e-47
Msa0639270	Msa0717890	0.805293	1.431366e-49	-8.615850e-47
Msa0639270	Msa0738030	0.815018	1.145829e-51	-8.615850e-47
Msa0639270	Msa0741070	0.801185	1.014338e-48	-8.615850e-47
Msa0639270	Msa0749440	0.800640	1.311007e-48	-8.615850e-47
Msa0639270	Msa0751850	0.805196	1.499908e-49	-8.615850e-47
Msa0639270	Msa0807030	0.804413	2.186324e-49	-8.615850e-47
Msa0639270	Msa0817460	0.829361	5.373823e-55	-8.615850e-47
Msa0639270	Msa0830230	0.811099	8.294369e-51	-8.615850e-47
Msa0639270	Msa0861130	0.800668	1.293754e-48	-8.615850e-47
Msa0639270	Msa0909110	0.802745	4.849421e-49	-8.615850e-47
Msa0639270	Msa1305200	0.808628	2.820896e-50	-8.615850e-47
Msa0639270	Msa1305350	0.811524	6.705297e-51	-8.615850e-47
Msa0639270	Msa1331000	0.815956	7.086353e-52	-8.615850e-47
Msa0639270	Msa1371940	0.802512	5.417073e-49	-8.615850e-47
Msa0639270	Msa1372150	0.802730	4.884177e-49	-8.615850e-47
Msa0145260	Msa0639270	0.825270	5.135763e-54	-8.615850e-47
Msa0165520	Msa0639270	0.810746	9.886745e-51	-8.615850e-47
Msa0231060	Msa0639270	0.800634	1.314347e-48	-8.615850e-47
Msa0412840	Msa0639270	0.805147	1.535851e-49	-8.615850e-47
Msa0433410	Msa0639270	-0.815428	9.290559e-52	-8.615850e-47
Msa0452710	Msa0639270	0.810043	1.402599e-50	-8.615850e-47
Msa0455760	Msa0639270	0.804205	2.415662e-49	-8.615850e-47
Msa0464100	Msa0639270	0.818826	1.600563e-52	-8.615850e-47
Msa0241140	Msa0639270	0.834533	2.837186e-56	-8.615850e-47
Msa0279220	Msa0639270	0.804633	1.966800e-49	-8.615850e-47
Msa0518380	Msa0639270	0.810149	1.330862e-50	-8.615850e-47
Msa0560660	Msa0639270	0.969941	7.217790e-131	-8.615850e-47
Msa0598160	Msa0639270	0.803072	4.149697e-49	-8.615850e-47

PPI

Gene1	Gene2	Type

Query id	Subject id	identity %	alignment length	mismatches	gap openings	q. start	q. end	s. start	s. end	e-value	bit score
Msa0639270	MtrunA17_Chr4g0050701	98.438	192	2	1	1	192	1	191	4.58e-142	393
Msa0639270	MtrunA17_Chr8g0384351	46.040	202	74	8	6	192	4	185	3.56e-50	160
Msa0639270	MtrunA17_Chr3g0130321	40.580	207	100	7	7	191	2	207	9.42e-47	152
Msa0639270	MtrunA17_Chr2g0318101	42.945	163	80	2	11	160	14	176	3.90e-43	147
Msa0639270	MtrunA17_Chr4g0042561	42.675	157	78	3	12	160	9	161	7.11e-42	142
Msa0639270	MtrunA17_Chr8g0359921	42.683	164	80	3	10	165	12	169	2.35e-41	142
Msa0639270	MtrunA17_Chr4g0047841	40.000	175	80	2	11	160	14	188	3.16e-41	142
Msa0639270	MtrunA17_Chr3g0124761	42.857	161	78	3	8	160	3	157	4.48e-40	137
Msa0639270	MtrunA17_Chr2g0318081	42.073	164	79	4	10	165	14	169	5.74e-40	139
Msa0639270	MtrunA17_Chr7g0263931	39.881	168	89	3	2	160	1	165	7.28e-40	138
Msa0639270	MtrunA17_Chr5g0417791	40.252	159	83	3	10	160	1	155	1.08e-39	135
Msa0639270	MtrunA17_Chr7g0214071	39.412	170	85	4	7	168	10	169	5.88e-39	134
Msa0639270	MtrunA17_Chr8g0384721	41.509	159	80	3	10	160	5	158	7.77e-39	134
Msa0639270	MtrunA17_Chr2g0326361	38.889	162	89	2	4	157	6	165	1.08e-38	135
Msa0639270	MtrunA17_Chr3g0130731	40.881	159	80	3	10	160	5	157	2.52e-36	128
Msa0639270	MtrunA17_Chr7g0252971	37.500	168	88	3	10	162	6	171	3.14e-36	129
Msa0639270	MtrunA17_Chr1g0200561	39.375	160	76	4	12	160	19	168	3.52e-35	126
Msa0639270	MtrunA17_Chr2g0309891	41.615	161	77	4	10	160	4	157	3.68e-35	126
Msa0639270	MtrunA17_Chr3g0139331	37.427	171	86	3	12	174	11	168	1.15e-34	125
Msa0639270	MtrunA17_Chr4g0054791	40.120	167	83	4	10	165	4	164	2.26e-34	123
Msa0639270	MtrunA17_Chr5g0398971	36.970	165	85	4	7	160	2	158	3.60e-34	124
Msa0639270	MtrunA17_Chr2g0309331	37.654	162	81	5	10	160	8	160	3.84e-34	123
Msa0639270	MtrunA17_Chr5g0400461	36.158	177	89	4	8	169	2	169	4.09e-34	123
Msa0639270	MtrunA17_Chr4g0056541	39.394	165	79	4	7	160	2	156	6.91e-34	123
Msa0639270	MtrunA17_Chr4g0018391	37.888	161	79	4	11	160	6	156	7.34e-34	122
Msa0639270	MtrunA17_Chr8g0361731	38.608	158	86	2	14	160	16	173	1.04e-33	123
Msa0639270	MtrunA17_Chr1g0147421	39.375	160	76	4	12	160	27	176	1.23e-33	122
Msa0639270	MtrunA17_Chr5g0405211	39.375	160	76	4	12	160	8	157	1.54e-33	122
Msa0639270	MtrunA17_Chr8g0346001	36.095	169	92	4	6	160	9	175	2.92e-33	122
Msa0639270	MtrunA17_Chr5g0433781	40.373	161	78	4	10	160	4	156	2.93e-33	124
Msa0639270	MtrunA17_Chr4g0060931	34.375	192	102	4	1	174	6	191	3.03e-33	121
Msa0639270	MtrunA17_Chr3g0109821	38.509	161	82	4	10	160	4	157	6.03e-33	124
Msa0639270	MtrunA17_Chr8g0372121	37.500	160	79	4	12	160	6	155	8.95e-33	119
Msa0639270	MtrunA17_Chr1g0183741	35.542	166	89	2	10	167	8	163	1.11e-32	118
Msa0639270	MtrunA17_Chr6g0481091	35.955	178	91	5	10	172	4	173	1.32e-32	117
Msa0639270	MtrunA17_Chr6g0484441	34.197	193	106	4	11	192	4	186	1.63e-32	119
Msa0639270	MtrunA17_Chr5g0417001	37.580	157	88	2	14	160	16	172	1.82e-32	120
Msa0639270	MtrunA17_Chr4g0017921	36.145	166	84	4	6	160	2	156	1.89e-32	119
Msa0639270	MtrunA17_Chr6g0453451	36.413	184	103	4	3	178	11	188	4.28e-32	117
Msa0639270	MtrunA17_Chr7g0261411	38.217	157	79	2	10	158	8	154	4.76e-32	117
Msa0639270	MtrunA17_Chr8g0385991	37.179	156	89	4	12	160	14	167	6.21e-32	115
Msa0639270	MtrunA17_Chr6g0453131	39.130	161	86	3	11	160	14	173	7.54e-31	115
Msa0639270	MtrunA17_Chr2g0312321	35.196	179	95	5	10	178	9	176	8.74e-31	114
Msa0639270	MtrunA17_Chr3g0091921	37.580	157	84	3	12	160	16	166	1.14e-30	113
Msa0639270	MtrunA17_Chr2g0316971	36.250	160	90	2	9	160	20	175	1.63e-30	114
Msa0639270	MtrunA17_Chr3g0131911	36.420	162	93	3	12	164	14	174	6.75e-30	110
Msa0639270	MtrunA17_Chr1g0197351	37.654	162	89	3	10	161	40	199	3.26e-29	112
Msa0639270	MtrunA17_Chr6g0461661	31.156	199	125	2	1	191	7	201	4.67e-29	110
Msa0639270	MtrunA17_Chr3g0092671	37.736	159	77	7	14	160	7	155	1.67e-28	110
Msa0639270	MtrunA17_Chr7g0253011	31.792	173	104	3	1	163	6	174	3.91e-28	108
Msa0639270	MtrunA17_Chr4g0076731	38.710	155	78	3	14	160	56	201	5.22e-28	108
Msa0639270	MtrunA17_Chr2g0311651	31.707	164	96	4	14	161	24	187	6.18e-28	106
Msa0639270	MtrunA17_Chr3g0130101	36.709	158	82	4	14	161	9	158	7.13e-28	107
Msa0639270	MtrunA17_Chr2g0311661	33.533	167	89	5	14	161	23	186	8.06e-28	105
Msa0639270	MtrunA17_Chr7g0266701	35.673	171	84	8	11	162	3	166	1.39e-27	104
Msa0639270	MtrunA17_Chr5g0442771	31.447	159	97	3	14	160	20	178	1.71e-27	105
Msa0639270	MtrunA17_Chr8g0384201	36.250	160	84	5	12	161	6	157	8.84e-27	105
Msa0639270	MtrunA17_Chr1g0197361	34.568	162	78	6	14	160	10	158	1.73e-26	105
Msa0639270	MtrunA17_Chr8g0364791	36.250	160	84	5	12	161	6	157	4.78e-26	103
Msa0639270	MtrunA17_Chr3g0144271	38.000	150	84	2	1	141	12	161	7.57e-26	102
Msa0639270	MtrunA17_Chr7g0217721	31.148	183	107	3	7	172	14	194	2.20e-25	100
Msa0639270	MtrunA17_Chr4g0038751	35.256	156	81	3	14	160	17	161	2.60e-25	99.4
Msa0639270	MtrunA17_Chr2g0321631	37.888	161	80	6	13	158	5	160	2.60e-25	98.6
Msa0639270	MtrunA17_Chr4g0026141	36.250	160	85	5	12	158	5	160	7.15e-25	97.4
Msa0639270	MtrunA17_Chr7g0217711	36.842	133	74	2	7	131	14	144	1.10e-24	95.1
Msa0639270	MtrunA17_Chr1g0201021	37.226	137	74	4	14	140	21	155	2.13e-23	96.7
Msa0639270	MtrunA17_Chr3g0128111	30.818	159	92	4	15	163	45	195	1.85e-22	90.9
Msa0639270	MtrunA17_Chr8g0345671	30.952	168	87	6	4	157	3	155	8.96e-21	88.6
Msa0639270	MtrunA17_Chr3g0128151	30.061	163	96	4	11	163	21	175	4.09e-20	87.4
Msa0639270	MtrunA17_Chr5g0428991	30.864	162	94	4	12	163	25	178	5.40e-20	87.0
Msa0639270	MtrunA17_Chr8g0345731	33.588	131	74	4	12	129	24	154	1.76e-18	78.6
Msa0639270	MtrunA17_Chr3g0113031	38.679	106	60	3	66	171	3	103	1.01e-17	78.6
Msa0639270	MtrunA17_Chr3g0113001	39.806	103	47	4	67	160	20	116	1.49e-17	78.6
Msa0639270	MtrunA17_Chr2g0321741	32.558	129	63	4	43	162	23	136	1.49e-17	79.3
Msa0639270	MtrunA17_Chr8g0345691	27.950	161	87	7	11	157	11	156	3.58e-17	78.6
Msa0639270	MtrunA17_Chr8g0345711	31.818	132	74	5	12	130	12	140	7.34e-16	71.6
Msa0639270	MtrunA17_Chr8g0345701	31.333	150	69	6	8	129	3	146	2.82e-15	70.5
Msa0639270	MtrunA17_Chr7g0243371	49.153	59	30	0	78	136	38	96	1.97e-14	66.6
Msa0639270	MtrunA17_Chr7g0251661	31.915	141	83	6	6	135	4	142	1.60e-13	65.1
Msa0639270	MtrunA17_Chr8g0345741	30.303	99	58	4	42	130	22	119	7.40e-11	58.2

Query id	Subject id	identity %	alignment length	mismatches	gap openings	q. start	q. end	s. start	s. end	e-value	bit score
Msa0639270	AT5G64530.1	66.492	191	51	3	10	191	1	187	5.42e-84	246
Msa0639270	AT5G64530.2	70.161	124	33	1	10	133	1	120	2.53e-63	193
Msa0639270	AT4G27410.2	43.293	164	77	3	10	165	12	167	2.07e-41	141
Msa0639270	AT1G69490.1	39.474	190	96	5	11	186	8	192	5.14e-41	140
Msa0639270	AT1G52890.1	43.902	164	76	4	10	165	12	167	5.89e-41	141
Msa0639270	AT3G15500.1	44.512	164	75	4	10	165	12	167	1.00e-40	140
Msa0639270	AT1G61110.1	42.424	165	80	4	11	161	15	178	1.09e-40	140
Msa0639270	AT1G01720.1	38.860	193	100	5	10	191	5	190	2.06e-39	136
Msa0639270	AT4G27410.3	39.779	181	76	4	10	165	12	184	3.39e-38	134
Msa0639270	AT3G04070.2	40.741	162	84	3	11	160	9	170	3.80e-38	134
Msa0639270	AT1G77450.1	39.888	178	86	4	5	167	3	174	4.20e-38	132
Msa0639270	AT2G24430.2	40.881	159	79	2	12	162	16	167	7.85e-37	130
Msa0639270	AT2G24430.1	40.881	159	79	2	12	162	16	167	7.85e-37	130
Msa0639270	AT5G13180.1	42.767	159	75	3	7	158	9	158	8.75e-37	128
Msa0639270	AT5G63790.1	40.881	159	82	3	10	160	48	202	1.63e-36	129
Msa0639270	AT3G15510.1	38.372	172	87	3	16	168	21	192	1.72e-36	130
Msa0639270	AT5G63790.2	40.881	159	82	3	10	160	58	212	2.24e-36	129
Msa0639270	AT3G04070.1	39.326	178	80	5	11	160	9	186	6.57e-36	129
Msa0639270	AT2G33480.1	40.854	164	80	4	10	166	13	166	7.07e-36	126
Msa0639270	AT4G17980.1	39.130	161	84	3	12	162	6	162	1.77e-35	125
Msa0639270	AT2G33480.2	40.244	164	79	4	10	166	13	164	3.08e-35	125
Msa0639270	AT4G17980.2	39.130	161	84	3	12	162	6	162	3.55e-35	125
Msa0639270	AT1G71930.2	38.012	171	85	4	12	171	9	169	4.41e-35	125
Msa0639270	AT1G71930.1	38.012	171	85	4	12	171	9	169	4.41e-35	125
Msa0639270	AT4G36160.1	38.922	167	81	4	5	160	3	159	5.23e-35	127
Msa0639270	AT4G36160.3	38.922	167	81	4	5	160	3	159	5.23e-35	127
Msa0639270	AT4G36160.2	38.922	167	81	4	5	160	7	163	5.26e-35	127
Msa0639270	AT3G18400.1	40.373	161	73	4	11	160	4	152	8.76e-35	125
Msa0639270	AT5G53950.1	40.828	169	86	4	12	171	17	180	8.82e-35	126
Msa0639270	AT5G07680.2	39.623	159	82	3	10	160	1	153	1.20e-34	124
Msa0639270	AT5G07680.1	39.623	159	82	3	10	160	15	167	1.25e-34	125
Msa0639270	AT5G46590.1	40.373	161	80	4	12	162	6	160	1.59e-34	124
Msa0639270	AT5G08790.1	39.506	162	86	3	7	160	2	159	1.94e-34	123
Msa0639270	AT2G18060.3	38.650	163	79	4	9	160	6	158	3.70e-34	124
Msa0639270	AT2G18060.1	38.650	163	79	4	9	160	6	158	3.70e-34	124
Msa0639270	AT5G61430.1	38.994	159	83	3	10	160	14	166	1.26e-33	122
Msa0639270	AT5G62380.2	37.037	162	81	4	10	160	5	156	1.65e-33	122
Msa0639270	AT5G62380.1	37.037	162	81	4	10	160	5	156	1.65e-33	122
Msa0639270	AT1G79580.3	37.654	162	80	5	10	160	15	166	1.67e-33	122
Msa0639270	AT1G79580.5	37.654	162	80	5	10	160	15	166	1.67e-33	122
Msa0639270	AT1G79580.4	37.654	162	80	5	10	160	15	166	1.67e-33	122
Msa0639270	AT1G79580.2	37.654	162	80	5	10	160	15	166	1.67e-33	122
Msa0639270	AT1G79580.1	37.654	162	80	5	10	160	15	166	1.67e-33	122
Msa0639270	AT1G32510.1	39.157	166	81	4	12	162	6	166	1.85e-33	120
Msa0639270	AT5G66300.1	36.842	171	88	4	1	160	1	162	3.52e-33	120
Msa0639270	AT1G12260.2	36.970	165	83	4	7	160	2	156	5.88e-33	120
Msa0639270	AT3G61910.1	35.429	175	93	4	5	161	4	176	8.78e-33	120
Msa0639270	AT5G39610.1	36.364	176	95	4	9	176	17	183	1.40e-32	118
Msa0639270	AT1G12260.1	36.970	165	83	4	7	160	2	156	1.70e-32	120
Msa0639270	AT3G12977.1	34.426	183	105	3	10	184	16	191	1.90e-32	118
Msa0639270	AT3G17730.1	37.654	162	83	4	10	161	4	157	2.36e-32	117
Msa0639270	AT5G46590.2	43.382	136	66	3	12	137	6	140	3.20e-32	117
Msa0639270	AT1G65910.1	36.646	161	84	4	10	160	4	156	3.41e-32	122
Msa0639270	AT1G62700.1	36.970	165	83	4	7	160	2	156	4.55e-32	119
Msa0639270	AT1G62700.2	36.970	165	83	4	7	160	2	156	4.55e-32	119
Msa0639270	AT1G76420.1	37.725	167	89	2	8	166	18	177	5.31e-32	118
Msa0639270	AT1G52880.1	36.709	158	88	3	16	161	21	178	7.32e-32	117
Msa0639270	AT4G10350.1	37.195	164	84	4	6	158	3	158	7.74e-32	117
Msa0639270	AT1G33280.1	36.145	166	84	4	6	160	2	156	8.63e-32	117
Msa0639270	AT2G46770.1	34.483	174	94	4	5	160	9	180	2.23e-31	117
Msa0639270	AT1G54330.1	40.123	162	76	4	10	161	4	154	2.37e-31	115
Msa0639270	AT1G26870.1	37.017	181	97	3	12	181	16	190	2.47e-31	117
Msa0639270	AT1G56010.2	35.938	192	100	6	10	191	17	195	2.59e-31	116
Msa0639270	AT3G03200.1	37.267	161	84	4	10	160	4	157	3.55e-31	118
Msa0639270	AT5G17260.1	36.646	161	85	4	10	160	4	157	8.02e-31	117
Msa0639270	AT3G04060.1	35.897	195	103	6	10	191	18	203	2.15e-30	114
Msa0639270	AT1G32770.1	33.520	179	98	5	1	160	1	177	3.41e-30	114
Msa0639270	AT2G02450.1	38.710	155	78	3	14	160	53	198	5.67e-30	113
Msa0639270	AT3G10490.1	37.037	162	85	4	10	161	25	179	8.99e-30	110
Msa0639270	AT2G02450.2	38.710	155	78	3	14	160	53	198	1.01e-29	113
Msa0639270	AT3G10500.1	33.333	213	101	6	10	189	7	211	2.35e-29	114
Msa0639270	AT5G04410.1	38.554	166	74	6	10	160	7	159	3.59e-29	113
Msa0639270	AT3G15170.1	37.179	156	82	4	12	157	20	169	3.73e-29	110
Msa0639270	AT3G10480.1	36.420	162	86	4	10	161	25	179	4.38e-29	112
Msa0639270	AT5G39820.1	34.043	188	96	4	1	160	4	191	5.51e-29	110
Msa0639270	AT3G10480.2	36.420	162	85	4	10	161	25	178	7.07e-29	111
Msa0639270	AT3G29035.1	37.037	162	88	3	10	163	22	177	7.43e-29	109
Msa0639270	AT5G18270.1	36.875	160	88	3	10	161	19	173	1.28e-28	109
Msa0639270	AT3G10490.2	37.037	162	85	4	10	161	25	179	1.62e-28	110
Msa0639270	AT3G12910.1	34.756	164	89	5	14	160	23	185	2.03e-28	108
Msa0639270	AT5G18270.2	36.250	160	89	3	10	161	19	173	2.83e-28	108
Msa0639270	AT2G43000.1	34.194	155	87	3	14	160	20	167	5.26e-28	106
Msa0639270	AT5G22290.1	37.342	158	76	5	14	162	23	166	2.03e-27	106
Msa0639270	AT4G35580.1	36.686	169	85	5	11	167	8	166	1.98e-26	105
Msa0639270	AT4G35580.3	36.686	169	85	5	11	167	8	166	2.46e-26	105
Msa0639270	AT4G35580.2	36.686	169	85	5	11	167	8	166	2.57e-26	105
Msa0639270	AT4G28530.1	33.898	177	81	4	12	163	10	175	4.56e-26	102
Msa0639270	AT1G33060.1	34.545	165	90	4	12	166	24	180	8.03e-26	103
Msa0639270	AT1G33060.2	34.545	165	90	4	12	166	24	180	8.70e-26	103
Msa0639270	AT2G27300.1	41.732	127	63	3	12	129	14	138	1.17e-25	101
Msa0639270	AT2G17040.1	34.615	156	82	3	14	160	8	152	1.22e-25	100
Msa0639270	AT3G10480.3	30.769	195	85	4	10	161	25	212	3.37e-25	102
Msa0639270	AT3G44290.2	38.400	125	66	4	14	129	16	138	9.28e-25	97.1
Msa0639270	AT3G44290.1	38.400	125	66	4	14	129	16	138	2.39e-24	97.8
Msa0639270	AT1G32870.2	43.511	131	64	3	9	131	7	135	2.69e-24	99.4
Msa0639270	AT1G32870.1	43.511	131	64	3	9	131	7	135	2.76e-24	99.4
Msa0639270	AT1G34190.1	40.000	130	66	4	14	133	18	145	3.05e-24	99.4
Msa0639270	AT1G32870.3	43.511	131	64	3	9	131	43	171	3.06e-24	99.4
Msa0639270	AT3G49530.2	33.333	162	91	5	11	162	12	166	6.56e-24	97.8
Msa0639270	AT3G49530.1	33.333	162	91	5	11	162	12	166	6.67e-24	98.2
Msa0639270	AT1G34180.3	39.231	130	67	4	14	133	18	145	1.69e-23	96.7
Msa0639270	AT1G34180.1	39.231	130	67	4	14	133	18	145	1.95e-23	97.1
Msa0639270	AT5G64060.1	32.121	165	92	6	8	161	2	157	1.13e-22	93.6
Msa0639270	AT5G09330.5	33.333	162	90	5	10	161	4	157	1.31e-22	94.7
Msa0639270	AT5G09330.2	33.333	162	90	5	10	161	4	157	1.31e-22	94.7
Msa0639270	AT5G09330.4	33.333	162	90	5	10	161	4	157	1.31e-22	94.7
Msa0639270	AT5G09330.3	33.333	162	90	5	10	161	4	157	1.31e-22	94.7
Msa0639270	AT5G09330.1	33.333	162	90	5	10	161	4	157	1.31e-22	94.7
Msa0639270	AT1G34180.4	35.915	142	67	4	14	133	18	157	1.04e-21	92.0
Msa0639270	AT5G04395.1	32.450	151	80	5	4	132	20	170	1.05e-21	87.8
Msa0639270	AT1G34180.2	35.915	142	67	4	14	133	18	157	1.23e-21	92.0
Msa0639270	AT5G24590.2	31.288	163	95	4	10	162	11	166	3.49e-21	90.5
Msa0639270	AT5G22380.1	35.404	161	79	6	15	158	8	160	1.70e-20	85.9
Msa0639270	AT3G44350.2	33.918	171	92	7	12	168	5	168	1.76e-20	85.9
Msa0639270	AT5G50820.1	33.735	166	100	4	7	166	12	173	1.88e-20	84.7
Msa0639270	AT5G14000.1	29.255	188	103	7	6	176	9	183	7.44e-20	83.6
Msa0639270	AT3G44350.1	35.915	142	75	5	12	139	5	144	1.34e-19	81.6
Msa0639270	AT1G56010.1	33.094	139	73	4	61	191	2	128	3.53e-18	80.1
Msa0639270	AT5G14000.2	30.986	142	84	5	6	137	9	146	2.23e-16	73.2
Msa0639270	AT1G02230.1	28.492	179	102	7	13	178	4	169	2.68e-16	76.3
Msa0639270	AT3G12977.2	31.250	128	73	3	65	184	18	138	4.14e-16	73.9
Msa0639270	AT5G61430.2	32.836	134	73	4	67	192	8	132	5.28e-16	74.3
Msa0639270	AT4G10350.2	34.951	103	51	3	66	160	19	113	1.11e-15	73.9
Msa0639270	AT2G33480.3	40.000	90	46	2	77	166	28	109	2.15e-15	71.6
Msa0639270	AT4G01550.1	27.950	161	93	5	15	163	7	156	4.01e-15	73.2
Msa0639270	AT4G01520.1	30.061	163	90	5	13	162	5	156	1.79e-14	70.5
Msa0639270	AT4G01540.3	29.448	163	87	7	15	162	7	156	3.45e-14	70.5
Msa0639270	AT4G01540.1	29.448	163	87	7	15	162	7	156	3.55e-14	70.5
Msa0639270	AT3G04420.2	33.333	129	72	5	13	129	4	130	3.85e-14	69.3
Msa0639270	AT4G01540.2	29.448	163	87	7	15	162	7	156	4.53e-14	70.1
Msa0639270	AT3G04420.1	33.333	129	72	5	13	129	4	130	4.74e-14	69.7
Msa0639270	AT4G01540.4	29.448	163	87	7	15	162	7	156	5.02e-14	69.7
Msa0639270	AT1G02250.1	28.834	163	90	7	13	162	4	153	4.19e-13	67.0
Msa0639270	AT3G56520.1	27.072	181	99	7	12	176	8	171	8.24e-13	63.9
Msa0639270	AT2G43000.2	34.524	84	48	2	77	160	13	89	7.55e-12	62.0
Msa0639270	AT3G10490.4	36.471	85	47	2	77	161	2	79	1.23e-11	62.8
Msa0639270	AT3G10490.3	36.471	85	47	2	77	161	2	79	1.23e-11	62.8
Msa0639270	AT4G28530.2	33.945	109	46	3	12	95	10	117	1.29e-11	62.4
Msa0639270	AT1G01010.1	28.994	169	90	7	15	166	6	161	2.23e-11	62.0
Msa0639270	AT2G18060.2	35.443	79	41	2	82	160	2	70	7.64e-11	60.1

Find 67 sgRNAs with CRISPR-Local

Find 168 sgRNAs with CRISPR-GE

CRISPR-Local

CRISPR-Local
sgRNA_sequence	on_target_score	Position	Region
TGCATTTGCATCATCTAATT+TGG	0.155320	4_3:-34940123	None:intergenic
AAGAATATACTAACTGATTT+TGG	0.171613	4_3:-34939774	None:intergenic
ATATCTAGTGCCCCACTTGC+AGG	0.233245	4_3:-34940364	None:intergenic
AATTGATCAATGAATTATAT+TGG	0.250285	4_3:-34939061	None:intergenic
CATCTGGATGACAAGGTAAA+AGG	0.259924	4_3:-34939313	None:intergenic
CATTAGGTGCTTCTCCAATA+TGG	0.269862	4_3:-34939662	None:intergenic
AAGCCTTTCTATGAAGAAAA+TGG	0.313106	4_3:-34939289	None:intergenic
AAATATTATGTGTTCCATAT+TGG	0.324951	4_3:+34939648	Msa0639270:CDS
CAATTGGTTTGGTTACCATT+AGG	0.336748	4_3:-34939678	None:intergenic
GAATGACTAACAGTGGTTAT+TGG	0.338084	4_3:+34939562	Msa0639270:CDS
ATTGATCAATGAATTATATT+GGG	0.364866	4_3:-34939060	None:intergenic
CTATATTCTCTAAATAATAA+TGG	0.369337	4_3:+34939190	Msa0639270:exon
GAAATTAAATGAAAGAGAAA+TGG	0.371266	4_3:-34939148	None:intergenic
TGGGACAGAGCTATCTTGTT+TGG	0.375974	4_3:+34940056	Msa0639270:CDS
TTAGATATTTATCTCCCATT+TGG	0.379877	4_3:-34940206	None:intergenic
ACGTCATATTGCATATTGTT+TGG	0.391184	4_3:-34940403	None:intergenic
ATGGAAGCTAAAGTAGCTAT+TGG	0.400716	4_3:-34940296	None:intergenic
ATATTCTTGCATTATCCAAT+TGG	0.402397	4_3:-34939694	None:intergenic
CTTGCATTATCCAATTGGTT+TGG	0.405683	4_3:-34939689	None:intergenic
AATGGTACTATTATAGTAGA+AGG	0.419835	4_3:+34939529	Msa0639270:CDS
AATGTTTGTAGGTAGAGCTT+TGG	0.421136	4_3:+34939494	Msa0639270:intron
GTAGGTAGAGCTTTGGAAGA+GGG	0.424184	4_3:+34939501	Msa0639270:intron
AGAAATGGAGCTAGGTAGAA+TGG	0.430214	4_3:-34939133	None:intergenic
TGAAGTTGCCATGGATCAAA+TGG	0.443931	4_3:-34939359	None:intergenic
ATCTGGATGACAAGGTAAAA+GGG	0.446209	4_3:-34939312	None:intergenic
TTTGATCCATGGCAACTTCA+AGG	0.450052	4_3:+34939362	Msa0639270:CDS
TCAAGATCAGGGATAACATC+TGG	0.461523	4_3:-34939329	None:intergenic
CTAATGGTAACCAAACCAAT+TGG	0.465135	4_3:+34939679	Msa0639270:CDS
AATGGATAGAGGTCAAGATC+AGG	0.481249	4_3:-34939341	None:intergenic
ACCTCTATCCATTTGATCCA+TGG	0.490738	4_3:+34939351	Msa0639270:CDS
TGTAGGTAGAGCTTTGGAAG+AGG	0.497333	4_3:+34939500	Msa0639270:intron
AATGAAAGAGAAATGGAGCT+AGG	0.497819	4_3:-34939141	None:intergenic
TATCTAGTGCCCCACTTGCA+GGG	0.505390	4_3:-34940363	None:intergenic
CAGTGGTTATTGGATGCCAA+TGG	0.509528	4_3:+34939572	Msa0639270:CDS
AGCTCAAGCAATAAGAGAGT+TGG	0.517821	4_3:+34939618	Msa0639270:CDS
TGGGAGGGATCGAGTAGTGA+AGG	0.519542	4_3:-34939041	None:intergenic
CATATTGGAGAAGCACCTAA+TGG	0.525131	4_3:+34939663	Msa0639270:CDS
ATCAATGAATTATATTGGGA+GGG	0.531082	4_3:-34939056	None:intergenic
GTGTGGTGAGTGTCAAGGTT+TGG	0.532462	4_3:-34939094	None:intergenic
GCCATGGATCAAATGGATAG+AGG	0.536595	4_3:-34939352	None:intergenic
AGTGGTTATTGGATGCCAAT+GGG	0.539139	4_3:+34939573	Msa0639270:CDS
ACTTGTTCTTCCATTCCCAT+TGG	0.540129	4_3:-34939588	None:intergenic
AACAATGTTAATCTTCCACC+CGG	0.553928	4_3:+34939230	Msa0639270:CDS
AAGATACCTTGAAGTTGCCA+TGG	0.559700	4_3:-34939368	None:intergenic
TATGTAGCAGCCCTGCAAGT+GGG	0.564982	4_3:+34940353	Msa0639270:three_prime_UTR
GAAGATGATCAAGATGGAGA+TGG	0.565312	4_3:+34940036	Msa0639270:CDS
GATCAATGAATTATATTGGG+AGG	0.567165	4_3:-34939057	None:intergenic
AAGATGATCAAGATGGAGAT+GGG	0.567207	4_3:+34940037	Msa0639270:CDS
TTATTGGATGCCAATGGGAA+TGG	0.569720	4_3:+34939578	Msa0639270:CDS
TCCGACAGATGAAGAGCTTG+TGG	0.584104	4_3:+34939265	Msa0639270:CDS
ATGTAGCAGCCCTGCAAGTG+GGG	0.585226	4_3:+34940354	Msa0639270:three_prime_UTR
AGCAACTTCACTGATTACAA+TGG	0.589690	4_3:-34940315	None:intergenic
TTTGGATGATGATCTGCTAG+AGG	0.602702	4_3:-34939739	None:intergenic
ATGGATAGAGGTCAAGATCA+GGG	0.606057	4_3:-34939340	None:intergenic
ACCACAAGCTCTTCATCTGT+CGG	0.608045	4_3:-34939266	None:intergenic
CTATGTAGCAGCCCTGCAAG+TGG	0.612866	4_3:+34940352	Msa0639270:three_prime_UTR
TGTCGGATAAAATCTAAACC+CGG	0.617713	4_3:-34939249	None:intergenic
CTTTGGAAGAGGGAAATCAA+TGG	0.623475	4_3:+34939511	Msa0639270:CDS
CGTGATGAAGATGATCAAGA+TGG	0.626157	4_3:+34940030	Msa0639270:CDS
GAATGGATATGATATGATGA+AGG	0.630484	4_3:-34939116	None:intergenic
GTCGGATAAAATCTAAACCC+GGG	0.643132	4_3:-34939248	None:intergenic
GGGATAACATCTGGATGACA+AGG	0.648268	4_3:-34939320	None:intergenic
CAAAATAGAATGACTAACAG+TGG	0.651988	4_3:+34939555	Msa0639270:CDS
TGAAGGTGTGGTGAGTGTCA+AGG	0.664657	4_3:-34939099	None:intergenic
ACAATGTTAATCTTCCACCC+GGG	0.696944	4_3:+34939231	Msa0639270:CDS
GATATGATATGATGAAGGTG+TGG	0.698949	4_3:-34939111	None:intergenic
GGATAAAATCTAAACCCGGG+TGG	0.700319	4_3:-34939245	None:intergenic

CRISPR-GE

badsite warning	sgRNA_sequence	Strand	Position	Region	GC_content
!!!	GTTACATTAAATTTTAAATT+TGG	+	chr4_3:34939423-34939442	Msa0639270:intron	10.0%
!!	TTAATTAATTAAATGTTTGT+AGG	+	chr4_3:34939483-34939502	Msa0639270:intron	10.0%
!!!	GTTACATTAAATTTTAAATT+TGG	+	chr4_3:34939423-34939442	Msa0639270:intron	10.0%
!!	TTAATTAATTAAATGTTTGT+AGG	+	chr4_3:34939483-34939502	Msa0639270:intron	10.0%
!!	ATTGATCAATGAATTATATT+GGG	-	chr4_3:34939063-34939082	None:intergenic	15.0%
!!	AATTGATCAATGAATTATAT+TGG	-	chr4_3:34939064-34939083	None:intergenic	15.0%
!!	CTATATTCTCTAAATAATAA+TGG	+	chr4_3:34939190-34939209	Msa0639270:exon	15.0%
!!!	TACAAAGATATTTAAAATGT+CGG	-	chr4_3:34939905-34939924	None:intergenic	15.0%
!!	ATTGATCAATGAATTATATT+GGG	-	chr4_3:34939063-34939082	None:intergenic	15.0%
!!	AATTGATCAATGAATTATAT+TGG	-	chr4_3:34939064-34939083	None:intergenic	15.0%
!!	CTATATTCTCTAAATAATAA+TGG	+	chr4_3:34939190-34939209	Msa0639270:exon	15.0%
!!!	TACAAAGATATTTAAAATGT+CGG	-	chr4_3:34939905-34939924	None:intergenic	15.0%
!!	GAAATTAAATGAAAGAGAAA+TGG	-	chr4_3:34939151-34939170	None:intergenic	20.0%
!!	TAATGTAACATAGTATGAAT+TGG	-	chr4_3:34939412-34939431	None:intergenic	20.0%
!!	AAATATTATGTGTTCCATAT+TGG	+	chr4_3:34939648-34939667	Msa0639270:CDS	20.0%
!!!	AAGAATATACTAACTGATTT+TGG	-	chr4_3:34939777-34939796	None:intergenic	20.0%
!!!	ACAAAGATATTTAAAATGTC+GGG	-	chr4_3:34939904-34939923	None:intergenic	20.0%
!!!	TTATTTTTCCTTTGATTTAG+TGG	+	chr4_3:34939986-34940005	Msa0639270:intron	20.0%
!!!	TATTTTTCCTTTGATTTAGT+GGG	+	chr4_3:34939987-34940006	Msa0639270:intron	20.0%
!!	GAAATTAAATGAAAGAGAAA+TGG	-	chr4_3:34939151-34939170	None:intergenic	20.0%
!!	TAATGTAACATAGTATGAAT+TGG	-	chr4_3:34939412-34939431	None:intergenic	20.0%
!!	AAATATTATGTGTTCCATAT+TGG	+	chr4_3:34939648-34939667	Msa0639270:CDS	20.0%
!!!	AAGAATATACTAACTGATTT+TGG	-	chr4_3:34939777-34939796	None:intergenic	20.0%
!!!	ACAAAGATATTTAAAATGTC+GGG	-	chr4_3:34939904-34939923	None:intergenic	20.0%
!!!	TTATTTTTCCTTTGATTTAG+TGG	+	chr4_3:34939986-34940005	Msa0639270:intron	20.0%
!!!	TATTTTTCCTTTGATTTAGT+GGG	+	chr4_3:34939987-34940006	Msa0639270:intron	20.0%
!	ATCAATGAATTATATTGGGA+GGG	-	chr4_3:34939059-34939078	None:intergenic	25.0%
!	TATTCACACACATAAGATAA+TGG	-	chr4_3:34939454-34939473	None:intergenic	25.0%
!	AATGGTACTATTATAGTAGA+AGG	+	chr4_3:34939529-34939548	Msa0639270:CDS	25.0%
!	ATATTCTTGCATTATCCAAT+TGG	-	chr4_3:34939697-34939716	None:intergenic	25.0%
!!!	TTTTGGTTGTGATTTTCTTT+TGG	-	chr4_3:34939760-34939779	None:intergenic	25.0%
!!	AATTAGCTACATTTTCCAAA+TGG	+	chr4_3:34940191-34940210	Msa0639270:three_prime_UTR	25.0%
!!	ATTAGCTACATTTTCCAAAT+GGG	+	chr4_3:34940192-34940211	Msa0639270:three_prime_UTR	25.0%
!	TTAGATATTTATCTCCCATT+TGG	-	chr4_3:34940209-34940228	None:intergenic	25.0%
!	ATCAATGAATTATATTGGGA+GGG	-	chr4_3:34939059-34939078	None:intergenic	25.0%
!	TATTCACACACATAAGATAA+TGG	-	chr4_3:34939454-34939473	None:intergenic	25.0%
!	AATGGTACTATTATAGTAGA+AGG	+	chr4_3:34939529-34939548	Msa0639270:CDS	25.0%
!	ATATTCTTGCATTATCCAAT+TGG	-	chr4_3:34939697-34939716	None:intergenic	25.0%
!!!	TTTTGGTTGTGATTTTCTTT+TGG	-	chr4_3:34939760-34939779	None:intergenic	25.0%
!!	AATTAGCTACATTTTCCAAA+TGG	+	chr4_3:34940191-34940210	Msa0639270:three_prime_UTR	25.0%
!!	ATTAGCTACATTTTCCAAAT+GGG	+	chr4_3:34940192-34940211	Msa0639270:three_prime_UTR	25.0%
!	TTAGATATTTATCTCCCATT+TGG	-	chr4_3:34940209-34940228	None:intergenic	25.0%
	GATCAATGAATTATATTGGG+AGG	-	chr4_3:34939060-34939079	None:intergenic	30.0%
	GAATGGATATGATATGATGA+AGG	-	chr4_3:34939119-34939138	None:intergenic	30.0%
	AAGCCTTTCTATGAAGAAAA+TGG	-	chr4_3:34939292-34939311	None:intergenic	30.0%
	CAAAATAGAATGACTAACAG+TGG	+	chr4_3:34939555-34939574	Msa0639270:CDS	30.0%
	TGCATTTGCATCATCTAATT+TGG	-	chr4_3:34940126-34940145	None:intergenic	30.0%
	ACGTCATATTGCATATTGTT+TGG	-	chr4_3:34940406-34940425	None:intergenic	30.0%
	GATCAATGAATTATATTGGG+AGG	-	chr4_3:34939060-34939079	None:intergenic	30.0%
	GAATGGATATGATATGATGA+AGG	-	chr4_3:34939119-34939138	None:intergenic	30.0%
	AAGCCTTTCTATGAAGAAAA+TGG	-	chr4_3:34939292-34939311	None:intergenic	30.0%
	CAAAATAGAATGACTAACAG+TGG	+	chr4_3:34939555-34939574	Msa0639270:CDS	30.0%
	TGCATTTGCATCATCTAATT+TGG	-	chr4_3:34940126-34940145	None:intergenic	30.0%
	ACGTCATATTGCATATTGTT+TGG	-	chr4_3:34940406-34940425	None:intergenic	30.0%
	GATATGATATGATGAAGGTG+TGG	-	chr4_3:34939114-34939133	None:intergenic	35.0%
	AATGAAAGAGAAATGGAGCT+AGG	-	chr4_3:34939144-34939163	None:intergenic	35.0%
	AACAATGTTAATCTTCCACC+CGG	+	chr4_3:34939230-34939249	Msa0639270:CDS	35.0%
	TGTCGGATAAAATCTAAACC+CGG	-	chr4_3:34939252-34939271	None:intergenic	35.0%
!	GGTCCATTTTCTTCATAGAA+AGG	+	chr4_3:34939286-34939305	Msa0639270:CDS	35.0%
	ATCTGGATGACAAGGTAAAA+GGG	-	chr4_3:34939315-34939334	None:intergenic	35.0%
	AATGTTTGTAGGTAGAGCTT+TGG	+	chr4_3:34939494-34939513	Msa0639270:intron	35.0%
	GAATGACTAACAGTGGTTAT+TGG	+	chr4_3:34939562-34939581	Msa0639270:CDS	35.0%
!!	CAATTGGTTTGGTTACCATT+AGG	-	chr4_3:34939681-34939700	None:intergenic	35.0%
	CTAATGGTAACCAAACCAAT+TGG	+	chr4_3:34939679-34939698	Msa0639270:CDS	35.0%
	CTTGCATTATCCAATTGGTT+TGG	-	chr4_3:34939692-34939711	None:intergenic	35.0%
!!	AATGTGCTGAGTTTTGTCAT+TGG	-	chr4_3:34939841-34939860	None:intergenic	35.0%
	CATATCACCCACTAAATCAA+AGG	-	chr4_3:34939997-34940016	None:intergenic	35.0%
	AAGATGATCAAGATGGAGAT+GGG	+	chr4_3:34940037-34940056	Msa0639270:CDS	35.0%
	ATGGAAGCTAAAGTAGCTAT+TGG	-	chr4_3:34940299-34940318	None:intergenic	35.0%
!	AGCAACTTCACTGATTACAA+TGG	-	chr4_3:34940318-34940337	None:intergenic	35.0%
	GATATGATATGATGAAGGTG+TGG	-	chr4_3:34939114-34939133	None:intergenic	35.0%
	AATGAAAGAGAAATGGAGCT+AGG	-	chr4_3:34939144-34939163	None:intergenic	35.0%
	AACAATGTTAATCTTCCACC+CGG	+	chr4_3:34939230-34939249	Msa0639270:CDS	35.0%
	TGTCGGATAAAATCTAAACC+CGG	-	chr4_3:34939252-34939271	None:intergenic	35.0%
!	GGTCCATTTTCTTCATAGAA+AGG	+	chr4_3:34939286-34939305	Msa0639270:CDS	35.0%
	ATCTGGATGACAAGGTAAAA+GGG	-	chr4_3:34939315-34939334	None:intergenic	35.0%
	AATGTTTGTAGGTAGAGCTT+TGG	+	chr4_3:34939494-34939513	Msa0639270:intron	35.0%
	GAATGACTAACAGTGGTTAT+TGG	+	chr4_3:34939562-34939581	Msa0639270:CDS	35.0%
!!	CAATTGGTTTGGTTACCATT+AGG	-	chr4_3:34939681-34939700	None:intergenic	35.0%
	CTAATGGTAACCAAACCAAT+TGG	+	chr4_3:34939679-34939698	Msa0639270:CDS	35.0%
	CTTGCATTATCCAATTGGTT+TGG	-	chr4_3:34939692-34939711	None:intergenic	35.0%
!!	AATGTGCTGAGTTTTGTCAT+TGG	-	chr4_3:34939841-34939860	None:intergenic	35.0%
	CATATCACCCACTAAATCAA+AGG	-	chr4_3:34939997-34940016	None:intergenic	35.0%
	AAGATGATCAAGATGGAGAT+GGG	+	chr4_3:34940037-34940056	Msa0639270:CDS	35.0%
	ATGGAAGCTAAAGTAGCTAT+TGG	-	chr4_3:34940299-34940318	None:intergenic	35.0%
!	AGCAACTTCACTGATTACAA+TGG	-	chr4_3:34940318-34940337	None:intergenic	35.0%
	AGAAATGGAGCTAGGTAGAA+TGG	-	chr4_3:34939136-34939155	None:intergenic	40.0%
	ACAATGTTAATCTTCCACCC+GGG	+	chr4_3:34939231-34939250	Msa0639270:CDS	40.0%
	GTCGGATAAAATCTAAACCC+GGG	-	chr4_3:34939251-34939270	None:intergenic	40.0%
	CATCTGGATGACAAGGTAAA+AGG	-	chr4_3:34939316-34939335	None:intergenic	40.0%
	TCAAGATCAGGGATAACATC+TGG	-	chr4_3:34939332-34939351	None:intergenic	40.0%
	ATGGATAGAGGTCAAGATCA+GGG	-	chr4_3:34939343-34939362	None:intergenic	40.0%
	AATGGATAGAGGTCAAGATC+AGG	-	chr4_3:34939344-34939363	None:intergenic	40.0%
	ACCTCTATCCATTTGATCCA+TGG	+	chr4_3:34939351-34939370	Msa0639270:CDS	40.0%
	TGAAGTTGCCATGGATCAAA+TGG	-	chr4_3:34939362-34939381	None:intergenic	40.0%
	TTTGATCCATGGCAACTTCA+AGG	+	chr4_3:34939362-34939381	Msa0639270:CDS	40.0%
	AAGATACCTTGAAGTTGCCA+TGG	-	chr4_3:34939371-34939390	None:intergenic	40.0%
!	CTTTGGAAGAGGGAAATCAA+TGG	+	chr4_3:34939511-34939530	Msa0639270:CDS	40.0%
	AGTGGTTATTGGATGCCAAT+GGG	+	chr4_3:34939573-34939592	Msa0639270:CDS	40.0%
	TTATTGGATGCCAATGGGAA+TGG	+	chr4_3:34939578-34939597	Msa0639270:CDS	40.0%
	ACTTGTTCTTCCATTCCCAT+TGG	-	chr4_3:34939591-34939610	None:intergenic	40.0%
	AGCTCAAGCAATAAGAGAGT+TGG	+	chr4_3:34939618-34939637	Msa0639270:CDS	40.0%
	CATTAGGTGCTTCTCCAATA+TGG	-	chr4_3:34939665-34939684	None:intergenic	40.0%
!!	CATATTGGAGAAGCACCTAA+TGG	+	chr4_3:34939663-34939682	Msa0639270:CDS	40.0%
	TTTGGATGATGATCTGCTAG+AGG	-	chr4_3:34939742-34939761	None:intergenic	40.0%
	CGTGATGAAGATGATCAAGA+TGG	+	chr4_3:34940030-34940049	Msa0639270:CDS	40.0%
	GAAGATGATCAAGATGGAGA+TGG	+	chr4_3:34940036-34940055	Msa0639270:CDS	40.0%
	AGAAATGGAGCTAGGTAGAA+TGG	-	chr4_3:34939136-34939155	None:intergenic	40.0%
	ACAATGTTAATCTTCCACCC+GGG	+	chr4_3:34939231-34939250	Msa0639270:CDS	40.0%
	GTCGGATAAAATCTAAACCC+GGG	-	chr4_3:34939251-34939270	None:intergenic	40.0%
	CATCTGGATGACAAGGTAAA+AGG	-	chr4_3:34939316-34939335	None:intergenic	40.0%
	TCAAGATCAGGGATAACATC+TGG	-	chr4_3:34939332-34939351	None:intergenic	40.0%
	ATGGATAGAGGTCAAGATCA+GGG	-	chr4_3:34939343-34939362	None:intergenic	40.0%
	AATGGATAGAGGTCAAGATC+AGG	-	chr4_3:34939344-34939363	None:intergenic	40.0%
	ACCTCTATCCATTTGATCCA+TGG	+	chr4_3:34939351-34939370	Msa0639270:CDS	40.0%
	TGAAGTTGCCATGGATCAAA+TGG	-	chr4_3:34939362-34939381	None:intergenic	40.0%
	TTTGATCCATGGCAACTTCA+AGG	+	chr4_3:34939362-34939381	Msa0639270:CDS	40.0%
	AAGATACCTTGAAGTTGCCA+TGG	-	chr4_3:34939371-34939390	None:intergenic	40.0%
!	CTTTGGAAGAGGGAAATCAA+TGG	+	chr4_3:34939511-34939530	Msa0639270:CDS	40.0%
	AGTGGTTATTGGATGCCAAT+GGG	+	chr4_3:34939573-34939592	Msa0639270:CDS	40.0%
	TTATTGGATGCCAATGGGAA+TGG	+	chr4_3:34939578-34939597	Msa0639270:CDS	40.0%
	ACTTGTTCTTCCATTCCCAT+TGG	-	chr4_3:34939591-34939610	None:intergenic	40.0%
	AGCTCAAGCAATAAGAGAGT+TGG	+	chr4_3:34939618-34939637	Msa0639270:CDS	40.0%
	CATTAGGTGCTTCTCCAATA+TGG	-	chr4_3:34939665-34939684	None:intergenic	40.0%
!!	CATATTGGAGAAGCACCTAA+TGG	+	chr4_3:34939663-34939682	Msa0639270:CDS	40.0%
	TTTGGATGATGATCTGCTAG+AGG	-	chr4_3:34939742-34939761	None:intergenic	40.0%
	CGTGATGAAGATGATCAAGA+TGG	+	chr4_3:34940030-34940049	Msa0639270:CDS	40.0%
	GAAGATGATCAAGATGGAGA+TGG	+	chr4_3:34940036-34940055	Msa0639270:CDS	40.0%
	GGATAAAATCTAAACCCGGG+TGG	-	chr4_3:34939248-34939267	None:intergenic	45.0%
	ACCACAAGCTCTTCATCTGT+CGG	-	chr4_3:34939269-34939288	None:intergenic	45.0%
	GGGATAACATCTGGATGACA+AGG	-	chr4_3:34939323-34939342	None:intergenic	45.0%
	GCCATGGATCAAATGGATAG+AGG	-	chr4_3:34939355-34939374	None:intergenic	45.0%
!!	TGTAGGTAGAGCTTTGGAAG+AGG	+	chr4_3:34939500-34939519	Msa0639270:intron	45.0%
!!	GTAGGTAGAGCTTTGGAAGA+GGG	+	chr4_3:34939501-34939520	Msa0639270:intron	45.0%
	CAGTGGTTATTGGATGCCAA+TGG	+	chr4_3:34939572-34939591	Msa0639270:CDS	45.0%
!!	CACATTAAGTGCCGAGAAGA+GGG	+	chr4_3:34939855-34939874	Msa0639270:intron	45.0%
!!	ACATTAAGTGCCGAGAAGAG+GGG	+	chr4_3:34939856-34939875	Msa0639270:intron	45.0%
	ACTTGCAATACCCCTCTTCT+CGG	-	chr4_3:34939869-34939888	None:intergenic	45.0%
	TGGGACAGAGCTATCTTGTT+TGG	+	chr4_3:34940056-34940075	Msa0639270:CDS	45.0%
	GGATAAAATCTAAACCCGGG+TGG	-	chr4_3:34939248-34939267	None:intergenic	45.0%
	ACCACAAGCTCTTCATCTGT+CGG	-	chr4_3:34939269-34939288	None:intergenic	45.0%
	GGGATAACATCTGGATGACA+AGG	-	chr4_3:34939323-34939342	None:intergenic	45.0%
	GCCATGGATCAAATGGATAG+AGG	-	chr4_3:34939355-34939374	None:intergenic	45.0%
!!	TGTAGGTAGAGCTTTGGAAG+AGG	+	chr4_3:34939500-34939519	Msa0639270:intron	45.0%
!!	GTAGGTAGAGCTTTGGAAGA+GGG	+	chr4_3:34939501-34939520	Msa0639270:intron	45.0%
	CAGTGGTTATTGGATGCCAA+TGG	+	chr4_3:34939572-34939591	Msa0639270:CDS	45.0%
!!	CACATTAAGTGCCGAGAAGA+GGG	+	chr4_3:34939855-34939874	Msa0639270:intron	45.0%
!!	ACATTAAGTGCCGAGAAGAG+GGG	+	chr4_3:34939856-34939875	Msa0639270:intron	45.0%
	ACTTGCAATACCCCTCTTCT+CGG	-	chr4_3:34939869-34939888	None:intergenic	45.0%
	TGGGACAGAGCTATCTTGTT+TGG	+	chr4_3:34940056-34940075	Msa0639270:CDS	45.0%
	GTGTGGTGAGTGTCAAGGTT+TGG	-	chr4_3:34939097-34939116	None:intergenic	50.0%
!	TGAAGGTGTGGTGAGTGTCA+AGG	-	chr4_3:34939102-34939121	None:intergenic	50.0%
	TCCGACAGATGAAGAGCTTG+TGG	+	chr4_3:34939265-34939284	Msa0639270:CDS	50.0%
!!	GCACATTAAGTGCCGAGAAG+AGG	+	chr4_3:34939854-34939873	Msa0639270:intron	50.0%
	TATGTAGCAGCCCTGCAAGT+GGG	+	chr4_3:34940353-34940372	Msa0639270:three_prime_UTR	50.0%
	TATCTAGTGCCCCACTTGCA+GGG	-	chr4_3:34940366-34940385	None:intergenic	50.0%
	ATATCTAGTGCCCCACTTGC+AGG	-	chr4_3:34940367-34940386	None:intergenic	50.0%
	GTGTGGTGAGTGTCAAGGTT+TGG	-	chr4_3:34939097-34939116	None:intergenic	50.0%
!	TGAAGGTGTGGTGAGTGTCA+AGG	-	chr4_3:34939102-34939121	None:intergenic	50.0%
	TCCGACAGATGAAGAGCTTG+TGG	+	chr4_3:34939265-34939284	Msa0639270:CDS	50.0%
!!	GCACATTAAGTGCCGAGAAG+AGG	+	chr4_3:34939854-34939873	Msa0639270:intron	50.0%
	TATGTAGCAGCCCTGCAAGT+GGG	+	chr4_3:34940353-34940372	Msa0639270:three_prime_UTR	50.0%
	TATCTAGTGCCCCACTTGCA+GGG	-	chr4_3:34940366-34940385	None:intergenic	50.0%
	ATATCTAGTGCCCCACTTGC+AGG	-	chr4_3:34940367-34940386	None:intergenic	50.0%
	CTATGTAGCAGCCCTGCAAG+TGG	+	chr4_3:34940352-34940371	Msa0639270:three_prime_UTR	55.0%
	ATGTAGCAGCCCTGCAAGTG+GGG	+	chr4_3:34940354-34940373	Msa0639270:three_prime_UTR	55.0%
	CTATGTAGCAGCCCTGCAAG+TGG	+	chr4_3:34940352-34940371	Msa0639270:three_prime_UTR	55.0%
	ATGTAGCAGCCCTGCAAGTG+GGG	+	chr4_3:34940354-34940373	Msa0639270:three_prime_UTR	55.0%

Chromosome	Type	Strat	End	Strand	Name
chr4_3	gene	34939043	34940437	34939043	ID=Msa0639270;Name=Msa0639270
chr4_3	mRNA	34939043	34940437	34939043	ID=Msa0639270-mRNA-1;Parent=Msa0639270;Name=Msa0639270-mRNA-1;_AED=0.08;_eAED=0.08;_QI=166\|1\|1\|1\|1\|1\|3\|306\|192
chr4_3	exon	34939043	34939383	34939043	ID=Msa0639270-mRNA-1:exon:8190;Parent=Msa0639270-mRNA-1
chr4_3	exon	34939505	34939782	34939505	ID=Msa0639270-mRNA-1:exon:8191;Parent=Msa0639270-mRNA-1
chr4_3	exon	34940006	34940437	34940006	ID=Msa0639270-mRNA-1:exon:8192;Parent=Msa0639270-mRNA-1
chr4_3	five_prime_UTR	34939043	34939208	34939043	ID=Msa0639270-mRNA-1:five_prime_utr;Parent=Msa0639270-mRNA-1
chr4_3	CDS	34939209	34939383	34939209	ID=Msa0639270-mRNA-1:cds;Parent=Msa0639270-mRNA-1
chr4_3	CDS	34939505	34939782	34939505	ID=Msa0639270-mRNA-1:cds;Parent=Msa0639270-mRNA-1
chr4_3	CDS	34940006	34940131	34940006	ID=Msa0639270-mRNA-1:cds;Parent=Msa0639270-mRNA-1
chr4_3	three_prime_UTR	34940132	34940437	34940132	ID=Msa0639270-mRNA-1:three_prime_utr;Parent=Msa0639270-mRNA-1

Gene Sequence

>Msa0639270

ATGGTAGATAATAATACTAATAACAATGTTAATCTTCCACCCGGGTTTAGATTTTATCCGACAGATGAAGAGCTTGTGGTCCATTTTCTTCATAGAAAGGCTTCCCTTTTACCTTGTCATCCAGATGTTATCCCTGATCTTGACCTCTATCCATTTGATCCATGGCAACTTCAAGGTAGAGCTTTGGAAGAGGGAAATCAATGGTACTATTATAGTAGAAGGACACAAAATAGAATGACTAACAGTGGTTATTGGATGCCAATGGGAATGGAAGAACAAGTTGTAACAAGCTCAAGCAATAAGAGAGTTGGTATGAAGAAATATTATGTGTTCCATATTGGAGAAGCACCTAATGGTAACCAAACCAATTGGATAATGCAAGAATATCGTCTATCAGATTCTGCTTCTTCCTCTAGCAGATCATCATCCAAAAGAAAATCACAACCAAAATCATGGGTGATATGTCGAGTTTATGAGCGTGATGAAGATGATCAAGATGGAGATGGGACAGAGCTATCTTGTTTGGATGAAGTTTTCTTGTCATTAGATGATCTTGATGAAGTAAGCTTGCCAAATTAG

Protein sequence

>Msa0639270

MVDNNTNNNVNLPPGFRFYPTDEELVVHFLHRKASLLPCHPDVIPDLDLYPFDPWQLQGRALEEGNQWYYYSRRTQNRMTNSGYWMPMGMEEQVVTSSSNKRVGMKKYYVFHIGEAPNGNQTNWIMQEYRLSDSASSSSRSSSKRKSQPKSWVICRVYERDEDDQDGDGTELSCLDEVFLSLDDLDEVSLPN*