AlfalfaGEDB Alfalfa Gene Editing Database

M. sativa cultivar zhongmu-4 / Msa0704920


Query id Subject id identity % alignment length mismatches gap openings q. start q. end s. start s. end e-value bit score
Msa0704920 MtrunA17_Chr8g0390301 95.918 343 6 4 1 342 1 336 0.0 666
Msa0704920 MtrunA17_Chr6g0486111 61.838 359 84 15 1 342 1 323 1.10e-132 381
Msa0704920 MtrunA17_Chr2g0331431 49.432 352 130 12 15 341 1 329 2.98e-92 278
Msa0704920 MtrunA17_Chr2g0280631 45.000 160 56 3 180 339 284 411 3.42e-35 132
Msa0704920 MtrunA17_Chr3g0141841 48.252 143 43 3 199 339 339 452 9.18e-35 132
Msa0704920 MtrunA17_Chr2g0318971 46.154 156 52 3 184 339 311 434 7.93e-34 129
Msa0704920 MtrunA17_Chr1g0207771 47.020 151 59 3 186 336 141 270 6.87e-33 123
Msa0704920 MtrunA17_Chr8g0361501 40.936 171 69 1 172 342 306 444 2.49e-31 122
Msa0704920 MtrunA17_Chr1g0199091 44.172 163 56 4 180 339 399 529 1.55e-30 121
Msa0704920 MtrunA17_Chr4g0045561 37.433 187 68 4 149 335 13 150 2.92e-25 100
Query id Subject id identity % alignment length mismatches gap openings q. start q. end s. start s. end e-value bit score
Msa0704920 AT4G29100.1 45.349 430 124 21 1 342 1 407 5.49e-88 270
Msa0704920 AT2G20100.1 52.439 246 79 7 107 342 145 362 1.78e-65 211
Msa0704920 AT4G29100.2 42.077 366 107 19 1 284 1 343 2.98e-56 187
Msa0704920 AT2G20100.3 44.178 292 79 8 107 342 145 408 3.49e-56 188
Msa0704920 AT2G20100.4 49.451 182 60 6 107 284 145 298 4.00e-36 133
Msa0704920 AT2G20100.2 49.451 182 60 6 107 284 145 298 4.00e-36 133
Msa0704920 AT1G27660.1 47.590 166 49 5 184 340 316 452 2.57e-33 128
Msa0704920 AT3G20640.4 44.025 159 56 3 184 342 267 392 2.69e-32 124
Msa0704920 AT3G20640.1 44.025 159 56 3 184 342 329 454 5.27e-32 125
Msa0704920 AT3G19500.1 45.033 151 49 1 186 336 140 256 1.21e-31 120
Msa0704920 AT1G61660.3 41.899 179 70 3 161 339 242 386 1.53e-31 122
Msa0704920 AT1G61660.7 44.231 156 57 2 184 339 264 389 4.46e-31 121
Msa0704920 AT1G61660.1 44.231 156 57 2 184 339 264 389 4.46e-31 121
Msa0704920 AT4G05170.3 45.588 136 49 3 185 318 40 152 7.81e-26 102
Msa0704920 AT4G05170.1 45.588 136 49 3 185 318 176 288 1.29e-25 105
Msa0704920 AT4G05170.2 45.588 136 49 3 185 318 158 270 1.32e-25 104
Msa0704920 AT4G05170.5 45.588 136 49 3 185 318 133 245 1.40e-25 103
Msa0704920 AT4G21340.1 47.518 141 43 6 185 322 175 287 1.93e-25 104
Msa0704920 AT1G05710.9 42.029 138 59 3 200 336 29 146 4.96e-24 97.1
Msa0704920 AT1G05710.8 42.029 138 59 3 200 336 29 146 4.96e-24 97.1
Msa0704920 AT1G05710.13 42.029 138 59 3 200 336 37 154 6.35e-24 97.1
Msa0704920 AT1G05710.2 42.029 138 59 3 200 336 37 154 6.35e-24 97.1
Msa0704920 AT1G05710.10 42.029 138 59 3 200 336 37 154 6.35e-24 97.1
Msa0704920 AT1G05710.7 42.029 138 59 3 200 336 37 154 6.35e-24 97.1
Msa0704920 AT2G31730.2 39.073 151 51 2 186 336 25 134 1.08e-23 95.9
Msa0704920 AT2G31730.1 39.073 151 51 2 186 336 25 134 1.08e-23 95.9
Msa0704920 AT1G31050.7 43.750 160 56 6 186 342 305 433 1.03e-22 98.6
Msa0704920 AT1G31050.1 43.396 159 56 6 186 341 305 432 1.60e-22 98.2
Msa0704920 AT1G31050.6 43.396 159 56 6 186 341 309 436 1.92e-22 97.8
Msa0704920 AT4G05170.7 60.256 78 30 1 185 262 158 234 1.92e-21 92.0
Msa0704920 AT1G61660.6 60.811 74 29 0 184 257 264 337 1.37e-20 91.7
Msa0704920 AT1G61660.2 60.811 74 29 0 184 257 264 337 1.37e-20 91.7
Msa0704920 AT4G05170.6 67.797 59 19 0 185 243 158 216 1.65e-19 86.3
Msa0704920 AT4G05170.4 67.797 59 19 0 185 243 158 216 1.65e-19 86.3
Msa0704920 AT3G19500.2 60.294 68 27 0 186 253 140 207 2.59e-19 85.9
Msa0704920 AT1G49830.2 39.844 128 42 2 210 337 133 225 2.99e-19 86.3
Msa0704920 AT1G49830.1 39.844 128 42 2 210 337 134 226 3.14e-19 86.3
Msa0704920 AT1G05710.6 35.766 137 47 2 200 336 29 124 4.78e-19 82.8
Msa0704920 AT1G05710.11 35.766 137 47 2 200 336 37 132 6.21e-19 82.8
Msa0704920 AT1G05710.5 35.766 137 47 2 200 336 37 132 6.21e-19 82.8
Msa0704920 AT1G05710.1 35.766 137 47 2 200 336 37 132 6.21e-19 82.8
Msa0704920 AT1G05710.14 35.766 137 47 2 200 336 37 132 6.21e-19 82.8
Msa0704920 AT1G05710.3 35.766 137 47 2 200 336 37 132 6.21e-19 82.8
Msa0704920 AT1G05710.4 35.766 137 47 2 200 336 37 132 6.21e-19 82.8
Msa0704920 AT1G05710.12 35.766 137 47 2 200 336 37 132 6.21e-19 82.8
Msa0704920 AT3G20640.3 55.696 79 33 2 184 262 329 405 7.94e-19 87.0
Msa0704920 AT1G61660.4 34.641 153 68 3 187 339 247 367 3.50e-16 79.3
Msa0704920 AT3G20640.2 60.000 60 23 1 184 243 329 387 7.61e-15 75.5
Msa0704920 AT5G58010.1 30.380 158 92 3 186 326 95 251 1.78e-11 64.7
Msa0704920 AT1G31050.2 55.738 61 26 1 186 245 305 365 4.89e-11 63.9
Msa0704920 AT1G31050.5 55.738 61 26 1 186 245 309 369 5.24e-11 63.5

Find 118 sgRNAs with CRISPR-Local

Find 221 sgRNAs with CRISPR-GE


CRISPR-Local

CRISPR-Local
sgRNA_sequence on_target_score Position Region
CTTCTCTTCCTCTTCCTTCT+TGG 0.083493 4_4:+77452542 Msa0704920:CDS
CTAGATTTAATGTAGATTTA+TGG 0.133124 4_4:+77455980 Msa0704920:three_prime_UTR
CACTATTCATTACCTCAATT+TGG 0.188016 4_4:-77454771 None:intergenic
TAATTGGATTTACAATTAAT+TGG 0.220168 4_4:+77455697 Msa0704920:three_prime_UTR
GGGGATTTCAGTAGATTAAT+TGG 0.223123 4_4:+77455681 Msa0704920:exon
AGCATATATTCATAAATATT+TGG 0.241615 4_4:+77455723 Msa0704920:three_prime_UTR
AGAGAAGATGCATGAGGATA+TGG 0.253894 4_4:-77452526 None:intergenic
ATTTGAGACCAAGTAGAATT+TGG 0.254844 4_4:-77453088 None:intergenic
GATTATTGGGCTCCTGCTTT+TGG 0.257313 4_4:+77455656 Msa0704920:CDS
ATGGTGTTCCACCAGTTGTT+AGG 0.275388 4_4:-77452427 None:intergenic
CATCAACTCGTTTCCCCATT+TGG 0.284889 4_4:+77453940 Msa0704920:CDS
TCTTTCTTGATGCTTCAAAT+AGG 0.285345 4_4:-77452260 None:intergenic
GTGACAATGGTGCTGATTAT+TGG 0.291540 4_4:+77455642 Msa0704920:CDS
CCTGATCCATTTCCCAAGTA+TGG 0.292405 4_4:-77454902 None:intergenic
CTTTCTTGATGCTTCAAATA+GGG 0.296957 4_4:-77452259 None:intergenic
TATACCTGACCAGGGTCTTC+AGG 0.304733 4_4:-77455141 None:intergenic
GAAACTTGTTGCACAGGATT+TGG 0.306086 4_4:-77453134 None:intergenic
GGCACTTAGCTTACCATACT+TGG 0.309481 4_4:+77454889 Msa0704920:intron
GTAGTAGTGGAGAAGAAATT+AGG 0.320001 4_4:-77452481 None:intergenic
AAAAGCAATAAAGAAATTAA+AGG 0.324877 4_4:+77452065 Msa0704920:five_prime_UTR
CATACAAAGAGGCAATTAAT+TGG 0.333520 4_4:+77455749 Msa0704920:three_prime_UTR
ATTCCATTAGCTTAATTTAG+AGG 0.334453 4_4:+77455950 Msa0704920:three_prime_UTR
GGAGTAAGAAAATTAGAATT+AGG 0.340867 4_4:-77452505 None:intergenic
GCTATATATCAAATTATCTA+AGG 0.342905 4_4:+77455806 Msa0704920:three_prime_UTR
TGACCTCTAAATTAAGCTAA+TGG 0.354110 4_4:-77455953 None:intergenic
CAGGTTAGGAAGGAGAAGTT+AGG 0.364935 4_4:+77453898 Msa0704920:intron
AGCTTACCATACTTGGGAAA+TGG 0.367203 4_4:+77454896 Msa0704920:CDS
AATAATTAATGTTAGGTTCA+AGG 0.372540 4_4:+77455099 Msa0704920:intron
TCTGTCTTATTAGAATCTAT+TGG 0.375173 4_4:+77454727 Msa0704920:CDS
CCAGCCATCATTTGTTGCAC+TGG 0.375597 4_4:-77452400 None:intergenic
TGGTTGGTTAAGAAGCTATA+GGG 0.384219 4_4:-77452201 None:intergenic
CTCTTGTCTTTGTAGAATCT+AGG 0.384228 4_4:+77452326 Msa0704920:five_prime_UTR
TCAGTGAACAACTATGTCTA+TGG 0.389055 4_4:+77453043 Msa0704920:CDS
TATATATTCACCTTTCCAAA+TGG 0.397753 4_4:-77453955 None:intergenic
CCATACTTGGGAAATGGATC+AGG 0.409735 4_4:+77454902 Msa0704920:CDS
TATGGAAATGAAGAATTTCA+TGG 0.412434 4_4:+77453061 Msa0704920:CDS
ATTTGAGTTAATAATAATCA+TGG 0.425080 4_4:-77452133 None:intergenic
TGACAATGGTGCTGATTATT+GGG 0.428948 4_4:+77455643 Msa0704920:CDS
GATTGCTCATGATGCTATGC+AGG 0.429935 4_4:+77455831 Msa0704920:three_prime_UTR
GAGAAAGGCAGTTAGTGAAC+AGG 0.429996 4_4:+77455393 Msa0704920:CDS
AACACAATCCTCTGCTCCTC+AGG 0.430043 4_4:-77455586 None:intergenic
GTGGTTGGTTAAGAAGCTAT+AGG 0.436252 4_4:-77452202 None:intergenic
ATATATTCACCTTTCCAAAT+GGG 0.441398 4_4:-77453954 None:intergenic
ATCAGATCTATCTTCTGATC+AGG 0.442936 4_4:+77453213 Msa0704920:CDS
TTACCTCAATTTGGCTCTGA+AGG 0.445293 4_4:-77454762 None:intergenic
TGGTGTTCCACCAGTTGTTA+GGG 0.450899 4_4:-77452426 None:intergenic
TACAACTCAGTCTACATTCA+AGG 0.451223 4_4:+77453644 Msa0704920:CDS
ATACCTGACCAGGGTCTTCA+GGG 0.453388 4_4:-77455140 None:intergenic
GAGGAGCAGAGGATTGTGTT+TGG 0.456499 4_4:+77455589 Msa0704920:CDS
GGATTTCTCTAACACTAAAA+CGG 0.468693 4_4:+77453174 Msa0704920:CDS
ATGGAACACCAAATTCTACT+TGG 0.470969 4_4:+77453080 Msa0704920:CDS
ATTAGAATTAGGAGTAGTAG+TGG 0.475544 4_4:-77452494 None:intergenic
AGGAGGCTGACTTAGCATAC+TGG 0.481806 4_4:-77452981 None:intergenic
TCTTGTCTTTGTAGAATCTA+GGG 0.484970 4_4:+77452327 Msa0704920:five_prime_UTR
CTCACCAGTGCAACAAATGA+TGG 0.487107 4_4:+77452396 Msa0704920:CDS
TGAAAACTGTTTGAAGAGAA+AGG 0.488450 4_4:+77455378 Msa0704920:CDS
TCTATCAAAGTTTCTACAAA+GGG 0.490114 4_4:+77452232 Msa0704920:five_prime_UTR
CAATAAAGAAATTAAAGGTA+AGG 0.490950 4_4:+77452070 Msa0704920:five_prime_UTR
GTGGGGCATTGAAGAAAGCT+AGG 0.491010 4_4:+77453610 Msa0704920:CDS
ATTCCCTGAAGACCCTGGTC+AGG 0.494530 4_4:+77455137 Msa0704920:CDS
TTGATAGATGCTTCTGTGGT+TGG 0.497737 4_4:-77452217 None:intergenic
GAGAGGAAACAAAAGACAAA+AGG 0.499920 4_4:+77452100 Msa0704920:five_prime_UTR
TTAGGTTGATGATGATGATC+AGG 0.504746 4_4:-77452463 None:intergenic
GAAGGAACACTATTGTTGCT+TGG 0.508525 4_4:-77452177 None:intergenic
CCAGTGCAACAAATGATGGC+TGG 0.516782 4_4:+77452400 Msa0704920:CDS
GTAATAGCTCTTCAGCTGGT+GGG 0.518744 4_4:+77453592 Msa0704920:CDS
TGGCTGGAAACCCTAACAAC+TGG 0.519094 4_4:+77452416 Msa0704920:CDS
ATTCCTTCAGAGCCAAATTG+AGG 0.519370 4_4:+77454759 Msa0704920:CDS
ACTGGTGAAACTTGTTGCAC+AGG 0.522258 4_4:-77453140 None:intergenic
GAAATCCAACATGCTACTAC+TGG 0.532832 4_4:-77453158 None:intergenic
ATGGGGAAACGAGTTGATGA+AGG 0.534464 4_4:-77453936 None:intergenic
AAGATCAACTTCCTGAGTCA+TGG 0.537926 4_4:+77452575 Msa0704920:CDS
AAAATTAATGATTCTTAACA+AGG 0.543587 4_4:-77455896 None:intergenic
TAATAGCTCTTCAGCTGGTG+GGG 0.544172 4_4:+77453593 Msa0704920:CDS
ACTTGTTGCACAGGATTTGG+AGG 0.545722 4_4:-77453131 None:intergenic
TTTCACCAGTAGTAGCATGT+TGG 0.549867 4_4:+77453153 Msa0704920:CDS
ATCAGGTGCAGGAGGGCGCA+TGG 0.552169 4_4:-77452446 None:intergenic
ACTTGCATTGTGCATGACAC+TGG 0.554874 4_4:-77455614 None:intergenic
TATATTCACCTTTCCAAATG+GGG 0.558912 4_4:-77453953 None:intergenic
AACTTTGATAGATGCTTCTG+TGG 0.560023 4_4:-77452221 None:intergenic
ATCTATCAAAGTTTCTACAA+AGG 0.563949 4_4:+77452231 Msa0704920:five_prime_UTR
TGTTTATTCCCTGAAGACCC+TGG 0.564013 4_4:+77455132 Msa0704920:CDS
ACTCGTTTCCCCATTTGGAA+AGG 0.564282 4_4:+77453945 Msa0704920:CDS
GCACTTAGCTTACCATACTT+GGG 0.565697 4_4:+77454890 Msa0704920:CDS
TCAACAACAGAAGCATTTGA+AGG 0.568727 4_4:-77453001 None:intergenic
AAGAAAGACCTGAGGAGCAG+AGG 0.569148 4_4:+77455578 Msa0704920:CDS
ACAAAGAGGCAATTAATTGG+TGG 0.574036 4_4:+77455752 Msa0704920:three_prime_UTR
CTGGAAACCCTAACAACTGG+TGG 0.576344 4_4:+77452419 Msa0704920:CDS
AAAGGTAAGGAAGAAAAGAG+AGG 0.579069 4_4:+77452083 Msa0704920:five_prime_UTR
AGAGGAAGAGAAGATGCATG+AGG 0.580543 4_4:-77452532 None:intergenic
AAGTGTAATAGCTCTTCAGC+TGG 0.581737 4_4:+77453588 Msa0704920:intron
TGATCAGAAGATAGATCTGA+TGG 0.584255 4_4:-77453211 None:intergenic
AGGAGGTGACTCCATGACTC+AGG 0.588341 4_4:-77452586 None:intergenic
TGTAATAGCTCTTCAGCTGG+TGG 0.590012 4_4:+77453591 Msa0704920:CDS
TGATGATGATGATCAGGTGC+AGG 0.595942 4_4:-77452457 None:intergenic
GAATACATATATACCTGACC+AGG 0.598652 4_4:-77455150 None:intergenic
TACTTGGTCTCAAATAGTGT+CGG 0.599741 4_4:+77453096 Msa0704920:CDS
TATTAATTAATTACATGAGG+AGG 0.601019 4_4:-77452603 None:intergenic
GGTTGGTTAAGAAGCTATAG+GGG 0.607374 4_4:-77452200 None:intergenic
AAATTAATGATTCTTAACAA+GGG 0.614188 4_4:-77455895 None:intergenic
GTGTCATGCACAATGCAAGT+TGG 0.614481 4_4:+77455617 Msa0704920:CDS
TATAACTAGAAAGAGATCAA+AGG 0.620983 4_4:+77452287 Msa0704920:five_prime_UTR
ATTGCTCATGATGCTATGCA+GGG 0.621849 4_4:+77455832 Msa0704920:three_prime_UTR
CATACTTGGGAAATGGATCA+GGG 0.623056 4_4:+77454903 Msa0704920:CDS
TGGGGAAACGAGTTGATGAA+GGG 0.629472 4_4:-77453935 None:intergenic
TGGGGCATTGAAGAAAGCTA+GGG 0.639392 4_4:+77453611 Msa0704920:CDS
TGATGATGATCAGGTGCAGG+AGG 0.659045 4_4:-77452454 None:intergenic
ATGCAAGTTGGAAGTGACAA+TGG 0.664396 4_4:+77455629 Msa0704920:CDS
TCAGAAGATAGATCTGATGG+TGG 0.669438 4_4:-77453208 None:intergenic
TGTGGTGTATGAAGAAGAGA+AGG 0.672441 4_4:+77452958 Msa0704920:CDS
AATAGATTCTAATAAGACAG+AGG 0.674138 4_4:-77454725 None:intergenic
ACAACAGAAGCATTTGAAGG+AGG 0.678150 4_4:-77452998 None:intergenic
CAGGATTTGGAGGAAGACGA+AGG 0.695718 4_4:-77453121 None:intergenic
GTTGGTTAAGAAGCTATAGG+GGG 0.701910 4_4:-77452199 None:intergenic
GATGATGATCAGGTGCAGGA+GGG 0.703453 4_4:-77452453 None:intergenic
ATATTTGGAAGCATACAAAG+AGG 0.703645 4_4:+77455738 Msa0704920:three_prime_UTR
AATACATATATACCTGACCA+GGG 0.715304 4_4:-77455149 None:intergenic
TGGAAAATATAGGAGTGGTG+TGG 0.741548 4_4:+77452940 Msa0704920:intron

CRISPR-GE

badsite warning sgRNA_sequence Strand Position Region GC_content
!! ATCATATAGATAAAAAAAAA+TGG + chr4_4:77453436-77453455 Msa0704920:intron 10.0%
!! AAAAGCAATAAAGAAATTAA+AGG + chr4_4:77452065-77452084 Msa0704920:five_prime_UTR 15.0%
!!! ATTTGAGTTAATAATAATCA+TGG - chr4_4:77452136-77452155 None:intergenic 15.0%
!! AAAAAAAGTTAAATTATGGA+CGG - chr4_4:77452817-77452836 None:intergenic 15.0%
!!! CAAAAATTATATATCCTTTT+TGG + chr4_4:77453499-77453518 Msa0704920:intron 15.0%
!!! TGTTTTTTCAAAGTTATTAT+TGG - chr4_4:77454048-77454067 None:intergenic 15.0%
!!! AACTTTGAAAAAACAAATTA+AGG + chr4_4:77454053-77454072 Msa0704920:intron 15.0%
!! ATTTCTTAATACATATGAAA+TGG - chr4_4:77454212-77454231 None:intergenic 15.0%
!!! TTTGCTTTATGATAATTTTA+TGG + chr4_4:77454668-77454687 Msa0704920:intron 15.0%
!! CATTATTAACAAATTATTGA+CGG - chr4_4:77455514-77455533 None:intergenic 15.0%
!! TAATTGGATTTACAATTAAT+TGG + chr4_4:77455697-77455716 Msa0704920:three_prime_UTR 15.0%
!! AGCATATATTCATAAATATT+TGG + chr4_4:77455723-77455742 Msa0704920:three_prime_UTR 15.0%
!! AAATTAATGATTCTTAACAA+GGG - chr4_4:77455898-77455917 None:intergenic 15.0%
!! AAAATTAATGATTCTTAACA+AGG - chr4_4:77455899-77455918 None:intergenic 15.0%
!! CAATAAAGAAATTAAAGGTA+AGG + chr4_4:77452070-77452089 Msa0704920:five_prime_UTR 20.0%
!! TATTAATTAATTACATGAGG+AGG - chr4_4:77452606-77452625 None:intergenic 20.0%
!! GTGCAAAAAAAGTTAAATTA+TGG - chr4_4:77452821-77452840 None:intergenic 20.0%
!! ACTATGATTTGATTATTTGA+AGG + chr4_4:77452862-77452881 Msa0704920:intron 20.0%
!! TTTGTTAAAAAGAGATTTCA+AGG - chr4_4:77453709-77453728 None:intergenic 20.0%
!! TTCATATTAGAACAAAACTT+AGG + chr4_4:77453996-77454015 Msa0704920:intron 20.0%
!!! TTTTCAAAGTTATTATTGGA+TGG - chr4_4:77454044-77454063 None:intergenic 20.0%
!! AAAAAGAAAAACAACATACA+TGG - chr4_4:77454408-77454427 None:intergenic 20.0%
!!! ATGTTGTTTTTCTTTTTTGA+TGG + chr4_4:77454411-77454430 Msa0704920:intron 20.0%
!!! ACTTAACTTTTACTCAAAAT+TGG + chr4_4:77454550-77454569 Msa0704920:intron 20.0%
!! AATTGGAATAAAATTGAAGA+AGG + chr4_4:77454567-77454586 Msa0704920:intron 20.0%
!! TATCATAAAGCAAAACTAAA+GGG - chr4_4:77454662-77454681 None:intergenic 20.0%
!! TTATCATAAAGCAAAACTAA+AGG - chr4_4:77454663-77454682 None:intergenic 20.0%
!!! TTTATGATAATTTTATGGTG+TGG + chr4_4:77454673-77454692 Msa0704920:intron 20.0%
!!! TTATTCTTCTTTGTTTCATT+GGG - chr4_4:77454987-77455006 None:intergenic 20.0%
!!! ATTATTCTTCTTTGTTTCAT+TGG - chr4_4:77454988-77455007 None:intergenic 20.0%
!! CAACATAATTACAAGTTAAT+TGG - chr4_4:77455058-77455077 None:intergenic 20.0%
!! AATAATTAATGTTAGGTTCA+AGG + chr4_4:77455099-77455118 Msa0704920:intron 20.0%
!!! TATATATGTATTCTTTTCCT+TGG + chr4_4:77455160-77455179 Msa0704920:intron 20.0%
!!! CATTGTATTTTCTTACTTTA+TGG + chr4_4:77455341-77455360 Msa0704920:intron 20.0%
!! GCTATATATCAAATTATCTA+AGG + chr4_4:77455806-77455825 Msa0704920:three_prime_UTR 20.0%
!!! ACTTGCATACATTTTTATTA+AGG - chr4_4:77455860-77455879 None:intergenic 20.0%
!! CTAGATTTAATGTAGATTTA+TGG + chr4_4:77455980-77455999 Msa0704920:three_prime_UTR 20.0%
! ATCTATCAAAGTTTCTACAA+AGG + chr4_4:77452231-77452250 Msa0704920:five_prime_UTR 25.0%
! TCTATCAAAGTTTCTACAAA+GGG + chr4_4:77452232-77452251 Msa0704920:five_prime_UTR 25.0%
! TATAACTAGAAAGAGATCAA+AGG + chr4_4:77452287-77452306 Msa0704920:five_prime_UTR 25.0%
!! AAGAAAAAAGGTATGAATAG+AGG + chr4_4:77452358-77452377 Msa0704920:exon 25.0%
! GGAGTAAGAAAATTAGAATT+AGG - chr4_4:77452508-77452527 None:intergenic 25.0%
! GGGTATTAATTAATTACATG+AGG - chr4_4:77452609-77452628 None:intergenic 25.0%
!!! AACTTTTTTTGCACACTTAA+TGG + chr4_4:77452827-77452846 Msa0704920:intron 25.0%
!!! GTCTTAATTTTTGATGACTT+TGG + chr4_4:77452920-77452939 Msa0704920:intron 25.0%
!! TTGATGACTTTGGAAAATAT+AGG + chr4_4:77452930-77452949 Msa0704920:intron 25.0%
! TATGGAAATGAAGAATTTCA+TGG + chr4_4:77453061-77453080 Msa0704920:CDS 25.0%
! AGTAAGTTTCAATTGACAAT+TGG - chr4_4:77453354-77453373 None:intergenic 25.0%
!!! TCCAACTTTTTTTTGGAAAA+CGG + chr4_4:77453395-77453414 Msa0704920:intron 25.0%
! AACACAGAAATTAACCAAAA+AGG - chr4_4:77453516-77453535 None:intergenic 25.0%
! TTAAAAAGAGATTTCAAGGT+TGG - chr4_4:77453705-77453724 None:intergenic 25.0%
! ATATATTCACCTTTCCAAAT+GGG - chr4_4:77453957-77453976 None:intergenic 25.0%
! TATATATTCACCTTTCCAAA+TGG - chr4_4:77453958-77453977 None:intergenic 25.0%
! TGACACACTTAATATTAATC+GGG - chr4_4:77454140-77454159 None:intergenic 25.0%
! GTGACACACTTAATATTAAT+CGG - chr4_4:77454141-77454160 None:intergenic 25.0%
! AAACGTCATATAATTTAGGA+CGG - chr4_4:77454186-77454205 None:intergenic 25.0%
!! TCCTAAATTATATGACGTTT+TGG + chr4_4:77454186-77454205 Msa0704920:intron 25.0%
! CATGTGTGTTAAATTATGAT+TGG + chr4_4:77454436-77454455 Msa0704920:intron 25.0%
! ATCAAATCACATTAATACGT+AGG - chr4_4:77454487-77454506 None:intergenic 25.0%
! TAGCAATCTTAAATTTGCAT+TGG + chr4_4:77454594-77454613 Msa0704920:intron 25.0%
! ATCATAAAGCAAAACTAAAG+GGG - chr4_4:77454661-77454680 None:intergenic 25.0%
! AATAGATTCTAATAAGACAG+AGG - chr4_4:77454728-77454747 None:intergenic 25.0%
!! TCTGTCTTATTAGAATCTAT+TGG + chr4_4:77454727-77454746 Msa0704920:CDS 25.0%
! TGAAAATTCCTCAAACTTAA+TGG - chr4_4:77455188-77455207 None:intergenic 25.0%
!! AAGTTTGAGGAATTTTCATT+TGG + chr4_4:77455190-77455209 Msa0704920:intron 25.0%
! TAGTATATGATAACTTAAGC+TGG - chr4_4:77455289-77455308 None:intergenic 25.0%
!!! TTTTGACTGTCTTGTAAATT+AGG + chr4_4:77455538-77455557 Msa0704920:intron 25.0%
!! ATTCCATTAGCTTAATTTAG+AGG + chr4_4:77455950-77455969 Msa0704920:three_prime_UTR 25.0%
CTTTCTTGATGCTTCAAATA+GGG - chr4_4:77452262-77452281 None:intergenic 30.0%
TCTTTCTTGATGCTTCAAAT+AGG - chr4_4:77452263-77452282 None:intergenic 30.0%
TCTTGTCTTTGTAGAATCTA+GGG + chr4_4:77452327-77452346 Msa0704920:five_prime_UTR 30.0%
AGGGAAATTGAGAAGAAAAA+AGG + chr4_4:77452346-77452365 Msa0704920:five_prime_UTR 30.0%
ATTAGAATTAGGAGTAGTAG+TGG - chr4_4:77452497-77452516 None:intergenic 30.0%
! TCTTGATTTTCATTCCAAGA+AGG - chr4_4:77452559-77452578 None:intergenic 30.0%
AGTGTTAGAGAAACAAAAAC+TGG - chr4_4:77452754-77452773 None:intergenic 30.0%
! ATTTGAGACCAAGTAGAATT+TGG - chr4_4:77453091-77453110 None:intergenic 30.0%
GGATTTCTCTAACACTAAAA+CGG + chr4_4:77453174-77453193 Msa0704920:CDS 30.0%
!!! TTTGTCCTCCAACTTTTTTT+TGG + chr4_4:77453388-77453407 Msa0704920:intron 30.0%
! GTTTTCCAAAAAAAAGTTGG+AGG - chr4_4:77453396-77453415 None:intergenic 30.0%
! ACCGTTTTCCAAAAAAAAGT+TGG - chr4_4:77453399-77453418 None:intergenic 30.0%
! TTGATCTTCTCTTCATTTTC+AGG + chr4_4:77453879-77453898 Msa0704920:intron 30.0%
TATATTCACCTTTCCAAATG+GGG - chr4_4:77453956-77453975 None:intergenic 30.0%
ACACACTTAATATTAATCGG+GGG - chr4_4:77454138-77454157 None:intergenic 30.0%
GACACACTTAATATTAATCG+GGG - chr4_4:77454139-77454158 None:intergenic 30.0%
GCCAAAACGTCATATAATTT+AGG - chr4_4:77454190-77454209 None:intergenic 30.0%
ATCAATTGTGAGAGTTATTG+TGG + chr4_4:77454328-77454347 Msa0704920:intron 30.0%
TCAATTGTGAGAGTTATTGT+GGG + chr4_4:77454329-77454348 Msa0704920:intron 30.0%
CACTATTCATTACCTCAATT+TGG - chr4_4:77454774-77454793 None:intergenic 30.0%
ATTGAGGTAATGAATAGTGA+TGG + chr4_4:77454775-77454794 Msa0704920:intron 30.0%
AATACATATATACCTGACCA+GGG - chr4_4:77455152-77455171 None:intergenic 30.0%
TGAAAACTGTTTGAAGAGAA+AGG + chr4_4:77455378-77455397 Msa0704920:CDS 30.0%
AAAAAGAAAAGAAAGACCTG+AGG + chr4_4:77455570-77455589 Msa0704920:CDS 30.0%
! ATATTTGGAAGCATACAAAG+AGG + chr4_4:77455738-77455757 Msa0704920:three_prime_UTR 30.0%
CATACAAAGAGGCAATTAAT+TGG + chr4_4:77455749-77455768 Msa0704920:three_prime_UTR 30.0%
TGACCTCTAAATTAAGCTAA+TGG - chr4_4:77455956-77455975 None:intergenic 30.0%
AAAGGTAAGGAAGAAAAGAG+AGG + chr4_4:77452083-77452102 Msa0704920:five_prime_UTR 35.0%
GAGAGGAAACAAAAGACAAA+AGG + chr4_4:77452100-77452119 Msa0704920:five_prime_UTR 35.0%
! TGGTTGGTTAAGAAGCTATA+GGG - chr4_4:77452204-77452223 None:intergenic 35.0%
AACTTTGATAGATGCTTCTG+TGG - chr4_4:77452224-77452243 None:intergenic 35.0%
CTCTTGTCTTTGTAGAATCT+AGG + chr4_4:77452326-77452345 Msa0704920:five_prime_UTR 35.0%
!! TTAGGTTGATGATGATGATC+AGG - chr4_4:77452466-77452485 None:intergenic 35.0%
! GTAGTAGTGGAGAAGAAATT+AGG - chr4_4:77452484-77452503 None:intergenic 35.0%
! TTTTCATTCCAAGAAGGAAG+AGG - chr4_4:77452553-77452572 None:intergenic 35.0%
GAGTGATTGAGAAAGAGAAA+GGG - chr4_4:77452629-77452648 None:intergenic 35.0%
TGAGTGATTGAGAAAGAGAA+AGG - chr4_4:77452630-77452649 None:intergenic 35.0%
! GACTTTGGAAAATATAGGAG+TGG + chr4_4:77452935-77452954 Msa0704920:intron 35.0%
!! TCAACAACAGAAGCATTTGA+AGG - chr4_4:77453004-77453023 None:intergenic 35.0%
TCAGTGAACAACTATGTCTA+TGG + chr4_4:77453043-77453062 Msa0704920:CDS 35.0%
ATGGAACACCAAATTCTACT+TGG + chr4_4:77453080-77453099 Msa0704920:CDS 35.0%
TACTTGGTCTCAAATAGTGT+CGG + chr4_4:77453096-77453115 Msa0704920:CDS 35.0%
TGATCAGAAGATAGATCTGA+TGG - chr4_4:77453214-77453233 None:intergenic 35.0%
ATCAGATCTATCTTCTGATC+AGG + chr4_4:77453213-77453232 Msa0704920:CDS 35.0%
TACAACTCAGTCTACATTCA+AGG + chr4_4:77453644-77453663 Msa0704920:CDS 35.0%
ACACACACAAACATCATATG+TGG + chr4_4:77453732-77453751 Msa0704920:intron 35.0%
CACACACAAACATCATATGT+GGG + chr4_4:77453733-77453752 Msa0704920:intron 35.0%
!!! CTTCTCTTCATTTTCAGGTT+AGG + chr4_4:77453884-77453903 Msa0704920:intron 35.0%
!!! TCTTCATTTTCAGGTTAGGA+AGG + chr4_4:77453888-77453907 Msa0704920:intron 35.0%
CACACTTAATATTAATCGGG+GGG - chr4_4:77454137-77454156 None:intergenic 35.0%
! GTCATATAATTTAGGACGGA+GGG - chr4_4:77454182-77454201 None:intergenic 35.0%
CAATTGTGAGAGTTATTGTG+GGG + chr4_4:77454330-77454349 Msa0704920:intron 35.0%
AAAGCAAAACTAAAGGGGAT+GGG - chr4_4:77454656-77454675 None:intergenic 35.0%
TAAAGCAAAACTAAAGGGGA+TGG - chr4_4:77454657-77454676 None:intergenic 35.0%
GAATACATATATACCTGACC+AGG - chr4_4:77455153-77455172 None:intergenic 35.0%
ATTTATACACCCAACAGTCA+GGG - chr4_4:77455480-77455499 None:intergenic 35.0%
!! TGACAATGGTGCTGATTATT+GGG + chr4_4:77455643-77455662 Msa0704920:CDS 35.0%
GGGGATTTCAGTAGATTAAT+TGG + chr4_4:77455681-77455700 Msa0704920:exon 35.0%
ACAAAGAGGCAATTAATTGG+TGG + chr4_4:77455752-77455771 Msa0704920:three_prime_UTR 35.0%
GAAGGAACACTATTGTTGCT+TGG - chr4_4:77452180-77452199 None:intergenic 40.0%
GTTGGTTAAGAAGCTATAGG+GGG - chr4_4:77452202-77452221 None:intergenic 40.0%
! GGTTGGTTAAGAAGCTATAG+GGG - chr4_4:77452203-77452222 None:intergenic 40.0%
! GTGGTTGGTTAAGAAGCTAT+AGG - chr4_4:77452205-77452224 None:intergenic 40.0%
TTGATAGATGCTTCTGTGGT+TGG - chr4_4:77452220-77452239 None:intergenic 40.0%
AGAGAAGATGCATGAGGATA+TGG - chr4_4:77452529-77452548 None:intergenic 40.0%
AAGATCAACTTCCTGAGTCA+TGG + chr4_4:77452575-77452594 Msa0704920:CDS 40.0%
! AAGCTGAGTTGAACTATCGA+CGG + chr4_4:77452698-77452717 Msa0704920:intron 40.0%
CTATCGACGGAAATTAGTGA+TGG + chr4_4:77452711-77452730 Msa0704920:intron 40.0%
TGGAAAATATAGGAGTGGTG+TGG + chr4_4:77452940-77452959 Msa0704920:intron 40.0%
TGTGGTGTATGAAGAAGAGA+AGG + chr4_4:77452958-77452977 Msa0704920:CDS 40.0%
!! ACAACAGAAGCATTTGAAGG+AGG - chr4_4:77453001-77453020 None:intergenic 40.0%
!! GAAACTTGTTGCACAGGATT+TGG - chr4_4:77453137-77453156 None:intergenic 40.0%
TTTCACCAGTAGTAGCATGT+TGG + chr4_4:77453153-77453172 Msa0704920:CDS 40.0%
GAAATCCAACATGCTACTAC+TGG - chr4_4:77453161-77453180 None:intergenic 40.0%
TCAGAAGATAGATCTGATGG+TGG - chr4_4:77453211-77453230 None:intergenic 40.0%
AAGTGTAATAGCTCTTCAGC+TGG + chr4_4:77453588-77453607 Msa0704920:intron 40.0%
GCTGTAACTCTTGTCTTTCT+TGG + chr4_4:77453755-77453774 Msa0704920:intron 40.0%
! CGTCATATAATTTAGGACGG+AGG - chr4_4:77454183-77454202 None:intergenic 40.0%
ATTCCTTCAGAGCCAAATTG+AGG + chr4_4:77454759-77454778 Msa0704920:CDS 40.0%
!! TTACCTCAATTTGGCTCTGA+AGG - chr4_4:77454765-77454784 None:intergenic 40.0%
!!! TTCTCTTTACTTTTTCCCCG+TGG + chr4_4:77454858-77454877 Msa0704920:intron 40.0%
GCACTTAGCTTACCATACTT+GGG + chr4_4:77454890-77454909 Msa0704920:CDS 40.0%
AGCTTACCATACTTGGGAAA+TGG + chr4_4:77454896-77454915 Msa0704920:CDS 40.0%
CATACTTGGGAAATGGATCA+GGG + chr4_4:77454903-77454922 Msa0704920:CDS 40.0%
CTAATTGCATGTGCAAGCTT+AGG + chr4_4:77455028-77455047 Msa0704920:intron 40.0%
! CCTCAAACTTAATGGATCCA+AGG - chr4_4:77455180-77455199 None:intergenic 40.0%
CCTTGGATCCATTAAGTTTG+AGG + chr4_4:77455177-77455196 Msa0704920:intron 40.0%
TTTATACACCCAACAGTCAG+GGG - chr4_4:77455479-77455498 None:intergenic 40.0%
CATTTATACACCCAACAGTC+AGG - chr4_4:77455481-77455500 None:intergenic 40.0%
! ATGCAAGTTGGAAGTGACAA+TGG + chr4_4:77455629-77455648 Msa0704920:CDS 40.0%
!! GTGACAATGGTGCTGATTAT+TGG + chr4_4:77455642-77455661 Msa0704920:CDS 40.0%
ATTGCTCATGATGCTATGCA+GGG + chr4_4:77455832-77455851 Msa0704920:three_prime_UTR 40.0%
GTTAAGAAGCTATAGGGGGA+AGG - chr4_4:77452198-77452217 None:intergenic 45.0%
CTCACCAGTGCAACAAATGA+TGG + chr4_4:77452396-77452415 Msa0704920:CDS 45.0%
TGGTGTTCCACCAGTTGTTA+GGG - chr4_4:77452429-77452448 None:intergenic 45.0%
ATGGTGTTCCACCAGTTGTT+AGG - chr4_4:77452430-77452449 None:intergenic 45.0%
! TGATGATGATGATCAGGTGC+AGG - chr4_4:77452460-77452479 None:intergenic 45.0%
AGAGGAAGAGAAGATGCATG+AGG - chr4_4:77452535-77452554 None:intergenic 45.0%
CTTCTCTTCCTCTTCCTTCT+TGG + chr4_4:77452542-77452561 Msa0704920:CDS 45.0%
! ACTTGTTGCACAGGATTTGG+AGG - chr4_4:77453134-77453153 None:intergenic 45.0%
!! ACTGGTGAAACTTGTTGCAC+AGG - chr4_4:77453143-77453162 None:intergenic 45.0%
TGTAATAGCTCTTCAGCTGG+TGG + chr4_4:77453591-77453610 Msa0704920:CDS 45.0%
GTAATAGCTCTTCAGCTGGT+GGG + chr4_4:77453592-77453611 Msa0704920:CDS 45.0%
TAATAGCTCTTCAGCTGGTG+GGG + chr4_4:77453593-77453612 Msa0704920:CDS 45.0%
!! TGGGGCATTGAAGAAAGCTA+GGG + chr4_4:77453611-77453630 Msa0704920:CDS 45.0%
CAGGTTAGGAAGGAGAAGTT+AGG + chr4_4:77453898-77453917 Msa0704920:intron 45.0%
!! TGGGGAAACGAGTTGATGAA+GGG - chr4_4:77453938-77453957 None:intergenic 45.0%
!! ATGGGGAAACGAGTTGATGA+AGG - chr4_4:77453939-77453958 None:intergenic 45.0%
CATCAACTCGTTTCCCCATT+TGG + chr4_4:77453940-77453959 Msa0704920:CDS 45.0%
ACTCGTTTCCCCATTTGGAA+AGG + chr4_4:77453945-77453964 Msa0704920:CDS 45.0%
GGCACTTAGCTTACCATACT+TGG + chr4_4:77454889-77454908 Msa0704920:intron 45.0%
CCTGATCCATTTCCCAAGTA+TGG - chr4_4:77454905-77454924 None:intergenic 45.0%
CCATACTTGGGAAATGGATC+AGG + chr4_4:77454902-77454921 Msa0704920:CDS 45.0%
TGTTTATTCCCTGAAGACCC+TGG + chr4_4:77455132-77455151 Msa0704920:CDS 45.0%
GAGAAAGGCAGTTAGTGAAC+AGG + chr4_4:77455393-77455412 Msa0704920:CDS 45.0%
TTATACACCCAACAGTCAGG+GGG - chr4_4:77455478-77455497 None:intergenic 45.0%
ACTTGCATTGTGCATGACAC+TGG - chr4_4:77455617-77455636 None:intergenic 45.0%
GTGTCATGCACAATGCAAGT+TGG + chr4_4:77455617-77455636 Msa0704920:CDS 45.0%
! GATTATTGGGCTCCTGCTTT+TGG + chr4_4:77455656-77455675 Msa0704920:CDS 45.0%
GATTGCTCATGATGCTATGC+AGG + chr4_4:77455831-77455850 Msa0704920:three_prime_UTR 45.0%
!!! AACTTTATATTTTTTTTTAA+TGG + chr4_4:77452673-77452692 Msa0704920:intron 5.0%
!! TAATATGAATTTAATAAATT+AGG - chr4_4:77453985-77454004 None:intergenic 5.0%
!!! AAATATAAATAATTTTGTAT+AGG + chr4_4:77454228-77454247 Msa0704920:intron 5.0%
!! ATTATTTAATAATTAATGTT+AGG + chr4_4:77455092-77455111 Msa0704920:intron 5.0%
! CCAGCCATCATTTGTTGCAC+TGG - chr4_4:77452403-77452422 None:intergenic 50.0%
CCAGTGCAACAAATGATGGC+TGG + chr4_4:77452400-77452419 Msa0704920:CDS 50.0%
TGGCTGGAAACCCTAACAAC+TGG + chr4_4:77452416-77452435 Msa0704920:CDS 50.0%
CTGGAAACCCTAACAACTGG+TGG + chr4_4:77452419-77452438 Msa0704920:CDS 50.0%
GATGATGATCAGGTGCAGGA+GGG - chr4_4:77452456-77452475 None:intergenic 50.0%
! TGATGATGATCAGGTGCAGG+AGG - chr4_4:77452457-77452476 None:intergenic 50.0%
! AGGAGGCTGACTTAGCATAC+TGG - chr4_4:77452984-77453003 None:intergenic 50.0%
CAGGATTTGGAGGAAGACGA+AGG - chr4_4:77453124-77453143 None:intergenic 50.0%
!! GTGGGGCATTGAAGAAAGCT+AGG + chr4_4:77453610-77453629 Msa0704920:CDS 50.0%
GGGACTGAGTGAGTTTCATG+TGG + chr4_4:77454350-77454369 Msa0704920:intron 50.0%
! TTTTTCCCCGTGGATCATGC+AGG + chr4_4:77454868-77454887 Msa0704920:intron 50.0%
TAAGTGCCTGCATGATCCAC+GGG - chr4_4:77454877-77454896 None:intergenic 50.0%
CTAAGTGCCTGCATGATCCA+CGG - chr4_4:77454878-77454897 None:intergenic 50.0%
ATACCTGACCAGGGTCTTCA+GGG - chr4_4:77455143-77455162 None:intergenic 50.0%
TATACCTGACCAGGGTCTTC+AGG - chr4_4:77455144-77455163 None:intergenic 50.0%
AAGAAAGACCTGAGGAGCAG+AGG + chr4_4:77455578-77455597 Msa0704920:CDS 50.0%
AACACAATCCTCTGCTCCTC+AGG - chr4_4:77455589-77455608 None:intergenic 50.0%
GAGGAGCAGAGGATTGTGTT+TGG + chr4_4:77455589-77455608 Msa0704920:CDS 50.0%
!! TATTGGGCTCCTGCTTTTGG+TGG + chr4_4:77455659-77455678 Msa0704920:CDS 50.0%
!! ATTGGGCTCCTGCTTTTGGT+GGG + chr4_4:77455660-77455679 Msa0704920:CDS 50.0%
TGAAATCCCCCACCAAAAGC+AGG - chr4_4:77455671-77455690 None:intergenic 50.0%
AGGAGGTGACTCCATGACTC+AGG - chr4_4:77452589-77452608 None:intergenic 55.0%
AAGTGCCTGCATGATCCACG+GGG - chr4_4:77454876-77454895 None:intergenic 55.0%
ATTCCCTGAAGACCCTGGTC+AGG + chr4_4:77455137-77455156 Msa0704920:CDS 55.0%
TTCACGTCCCCCTGACTGTT+GGG + chr4_4:77455468-77455487 Msa0704920:intron 55.0%
!! TTGGGCTCCTGCTTTTGGTG+GGG + chr4_4:77455661-77455680 Msa0704920:CDS 55.0%
GTTCACGTCCCCCTGACTGT+TGG + chr4_4:77455467-77455486 Msa0704920:intron 60.0%
!! TGGGCTCCTGCTTTTGGTGG+GGG + chr4_4:77455662-77455681 Msa0704920:CDS 60.0%
! ATCAGGTGCAGGAGGGCGCA+TGG - chr4_4:77452449-77452468 None:intergenic 65.0%
Chromosome Type Strat End Strand Name
chr4_4 gene 77452056 77456051 77452056 ID=Msa0704920;Name=Msa0704920
chr4_4 mRNA 77452056 77456051 77452056 ID=Msa0704920-mRNA-1;Parent=Msa0704920;Name=Msa0704920-mRNA-1;_AED=0.12;_eAED=0.12;_QI=314|1|1|1|1|1|9|357|342
chr4_4 exon 77452056 77452611 77452056 ID=Msa0704920-mRNA-1:exon:24511;Parent=Msa0704920-mRNA-1
chr4_4 exon 77452952 77453234 77452952 ID=Msa0704920-mRNA-1:exon:24512;Parent=Msa0704920-mRNA-1
chr4_4 exon 77453591 77453665 77453591 ID=Msa0704920-mRNA-1:exon:24513;Parent=Msa0704920-mRNA-1
chr4_4 exon 77453901 77453966 77453901 ID=Msa0704920-mRNA-1:exon:24514;Parent=Msa0704920-mRNA-1
chr4_4 exon 77454715 77454780 77454715 ID=Msa0704920-mRNA-1:exon:24515;Parent=Msa0704920-mRNA-1
chr4_4 exon 77454890 77454961 77454890 ID=Msa0704920-mRNA-1:exon:24516;Parent=Msa0704920-mRNA-1
chr4_4 exon 77455114 77455158 77455114 ID=Msa0704920-mRNA-1:exon:24517;Parent=Msa0704920-mRNA-1
chr4_4 exon 77455370 77455414 77455370 ID=Msa0704920-mRNA-1:exon:24518;Parent=Msa0704920-mRNA-1
chr4_4 exon 77455560 77456051 77455560 ID=Msa0704920-mRNA-1:exon:24519;Parent=Msa0704920-mRNA-1
chr4_4 five_prime_UTR 77452056 77452369 77452056 ID=Msa0704920-mRNA-1:five_prime_utr;Parent=Msa0704920-mRNA-1
chr4_4 CDS 77452370 77452611 77452370 ID=Msa0704920-mRNA-1:cds;Parent=Msa0704920-mRNA-1
chr4_4 CDS 77452952 77453234 77452952 ID=Msa0704920-mRNA-1:cds;Parent=Msa0704920-mRNA-1
chr4_4 CDS 77453591 77453665 77453591 ID=Msa0704920-mRNA-1:cds;Parent=Msa0704920-mRNA-1
chr4_4 CDS 77453901 77453966 77453901 ID=Msa0704920-mRNA-1:cds;Parent=Msa0704920-mRNA-1
chr4_4 CDS 77454715 77454780 77454715 ID=Msa0704920-mRNA-1:cds;Parent=Msa0704920-mRNA-1
chr4_4 CDS 77454890 77454961 77454890 ID=Msa0704920-mRNA-1:cds;Parent=Msa0704920-mRNA-1
chr4_4 CDS 77455114 77455158 77455114 ID=Msa0704920-mRNA-1:cds;Parent=Msa0704920-mRNA-1
chr4_4 CDS 77455370 77455414 77455370 ID=Msa0704920-mRNA-1:cds;Parent=Msa0704920-mRNA-1
chr4_4 CDS 77455560 77455694 77455560 ID=Msa0704920-mRNA-1:cds;Parent=Msa0704920-mRNA-1
chr4_4 three_prime_UTR 77455695 77456051 77455695 ID=Msa0704920-mRNA-1:three_prime_utr;Parent=Msa0704920-mRNA-1
Gene Sequence

>Msa0704920

ATGAATAGAGGTGTTTATCTGCAAAGCTCACCAGTGCAACAAATGATGGCTGGAAACCCTAACAACTGGTGGAACACCATGCGCCCTCCTGCACCTGATCATCATCATCAACCTAATTTCTTCTCCACTACTACTCCTAATTCTAATTTTCTTACTCCATATCCTCATGCATCTTCTCTTCCTCTTCCTTCTTGGAATGAAAATCAAGATCAACTTCCTGAGTCATGGAGTCACCTCCTCATGAGTGGTGTGGTGTATGAAGAAGAGAAGGCCAGTATGCTAAGTCAGCCTCCTTCAAATGCTTCTGTTGTTGATCATGTCAAACAAGAAAGTTCAGTGAACAACTATGTCTATGGAAATGAAGAATTTCATGGAACACCAAATTCTACTTGGTCTCAAATAGTGTCGGTGCCTTCGTCTTCCTCCAAATCCTGTGCAACAAGTTTCACCAGTAGTAGCATGTTGGATTTCTCTAACACTAAAACGGATATAAGATCTCCACCATCAGATCTATCTTCTGATCAGTGTAATAGCTCTTCAGCTGGTGGGGCATTGAAGAAAGCTAGGGTTCAATCATCTACAACTCAGTCTACATTCAAGGTTAGGAAGGAGAAGTTAGGTGACAGAATTACTGCCCTTCATCAACTCGTTTCCCCATTTGGAAAGACTGACACAGCCTCTGTCTTATTAGAATCTATTGGTTATATCAGATTCCTTCAGAGCCAAATTGAGGCACTTAGCTTACCATACTTGGGAAATGGATCAGGGAACATGAAGAAGCAACAACAACAACAACAATATGTAGTTCAAGGAGAGAAGAATTGTTTATTCCCTGAAGACCCTGGTCAGCTGCTGAATGAAAACTGTTTGAAGAGAAAGGCAGTTAGTGAACAGGTCTGTGAAGAAAAAGAAAAGAAAGACCTGAGGAGCAGAGGATTGTGTTTGGTTCCAGTGTCATGCACAATGCAAGTTGGAAGTGACAATGGTGCTGATTATTGGGCTCCTGCTTTTGGTGGGGGATTTCAGTAG

Protein sequence

>Msa0704920

MNRGVYLQSSPVQQMMAGNPNNWWNTMRPPAPDHHHQPNFFSTTTPNSNFLTPYPHASSLPLPSWNENQDQLPESWSHLLMSGVVYEEEKASMLSQPPSNASVVDHVKQESSVNNYVYGNEEFHGTPNSTWSQIVSVPSSSSKSCATSFTSSSMLDFSNTKTDIRSPPSDLSSDQCNSSSAGGALKKARVQSSTTQSTFKVRKEKLGDRITALHQLVSPFGKTDTASVLLESIGYIRFLQSQIEALSLPYLGNGSGNMKKQQQQQQYVVQGEKNCLFPEDPGQLLNENCLKRKAVSEQVCEEKEKKDLRSRGLCLVPVSCTMQVGSDNGADYWAPAFGGGFQ*