AlfalfaGEDB Alfalfa Gene Editing Database

M. sativa cultivar zhongmu-4 / Msa0058600


Query id Subject id identity % alignment length mismatches gap openings q. start q. end s. start s. end e-value bit score
Msa0058600 MtrunA17_Chr1g0146311 97.842 556 12 0 1 556 1 556 0.0 1133
Msa0058600 MtrunA17_Chr3g0140511 63.284 542 160 9 18 554 19 526 0.0 641
Query id Subject id identity % alignment length mismatches gap openings q. start q. end s. start s. end e-value bit score
Msa0058600 AT2G25740.1 57.299 548 218 7 14 554 7 545 0.0 579
Msa0058600 AT2G25740.2 57.906 487 192 5 73 554 2 480 0.0 553

Find 141 sgRNAs with CRISPR-Local

Find 472 sgRNAs with CRISPR-GE


CRISPR-Local

CRISPR-Local
sgRNA_sequence on_target_score Position Region
TGTTTCACTTTCCTCGTTTA+AGG 0.119107 1_2:-15080650 None:intergenic
AACTGAAACCTAAGTCATTT+TGG 0.130038 1_2:+15083859 Msa0058600:CDS
TCAGGAGTTGTGCTCTTTCC+TGG 0.184844 1_2:+15079268 Msa0058600:intron
TTGATTCAAGTTTAGGGTTT+TGG 0.191814 1_2:-15076994 None:intergenic
TACAAAATATAGTTGGTTTC+CGG 0.206516 1_2:+15083200 Msa0058600:CDS
ATCTACAAGGCAGGAGCTTT+TGG 0.232171 1_2:+15082717 Msa0058600:CDS
CCTTCAAAGTATTCTGTTGA+TGG 0.250991 1_2:+15080619 Msa0058600:CDS
CCATCAGAGAAGGGCTTAAT+TGG 0.255033 1_2:+15080923 Msa0058600:CDS
CTCAACAGCAGCCACAAAAT+TGG 0.255978 1_2:-15079320 None:intergenic
TTATTTGGAGGTGTTATATT+TGG 0.276236 1_2:+15084178 Msa0058600:three_prime_UTR
TGGGATGTTTCTTAGCCTTA+TGG 0.277487 1_2:+15080490 Msa0058600:intron
TGGGTTTATCCATGGTTATT+TGG 0.287391 1_2:+15084163 Msa0058600:three_prime_UTR
ATAGGGAGCTGTTCCTCTTC+TGG 0.290687 1_2:+15080889 Msa0058600:CDS
AGCATCCTTACATACATATC+TGG 0.290747 1_2:+15078429 Msa0058600:CDS
GCAAATGGATTAGCTCTAAC+TGG 0.318248 1_2:+15083168 Msa0058600:CDS
TTCATGCTGCAATATGAATA+TGG 0.324531 1_2:-15083962 None:intergenic
GCTGGAGAATTTGCTCGATT+TGG 0.331253 1_2:-15077078 None:intergenic
CGAACTCCAAGGGATGCTTT+TGG 0.340355 1_2:+15080547 Msa0058600:CDS
CAGGAGTTGTGCTCTTTCCT+GGG 0.344746 1_2:+15079269 Msa0058600:intron
TATTTGGAGGTGTTATATTT+GGG 0.344945 1_2:+15084179 Msa0058600:three_prime_UTR
ACAAAATATAGTTGGTTTCC+GGG 0.353288 1_2:+15083201 Msa0058600:CDS
AGGTGTTATATTTGGGTGTT+GGG 0.362242 1_2:+15084186 Msa0058600:three_prime_UTR
CTCCTATTTGCTTGCACAAA+GGG 0.372296 1_2:+15081026 Msa0058600:CDS
AAGAGCATTCTTGCCTGGTT+GGG 0.374410 1_2:+15080987 Msa0058600:CDS
GAAAATCTGGATTCTAGAAT+AGG 0.375236 1_2:+15080871 Msa0058600:CDS
TTGCAGTACTAGTGAACATT+TGG 0.386437 1_2:+15083935 Msa0058600:three_prime_UTR
CAATACAATAGTCCTGGTTA+TGG 0.388001 1_2:+15078361 Msa0058600:intron
GGTGTCTGGTGTATTTAGAT+TGG 0.391654 1_2:-15080812 None:intergenic
TGCCTTGTAGATTCAGAAAC+AGG 0.392651 1_2:-15082706 None:intergenic
GAGGTGTTATATTTGGGTGT+TGG 0.394268 1_2:+15084185 Msa0058600:three_prime_UTR
GCATTTACATACGCACCAAC+AGG 0.399570 1_2:-15083108 None:intergenic
CGTATACCCCAAAATGACTT+AGG 0.415553 1_2:-15083867 None:intergenic
GTCAGGTAGCAATGGTGTTA+AGG 0.425291 1_2:-15080833 None:intergenic
GGATGAAAACCGCAAGCATT+GGG 0.425357 1_2:+15079524 Msa0058600:CDS
GTTGCAAGGAAGATTACTTA+AGG 0.430591 1_2:-15080581 None:intergenic
TGATTCATCATATTCAAAAC+TGG 0.431365 1_2:-15080737 None:intergenic
AAAATCTGGATTCTAGAATA+GGG 0.431861 1_2:+15080872 Msa0058600:CDS
ACGACTTTGTACAAGGCAAA+TGG 0.435116 1_2:+15083153 Msa0058600:CDS
CAGCACTTACAAAATATAGT+TGG 0.442633 1_2:+15083193 Msa0058600:CDS
TACAAATGTAAGGACTAGAT+TGG 0.446252 1_2:+15084143 Msa0058600:three_prime_UTR
TGGCACCGCAGGCGTCGTCC+CGG 0.453194 1_2:+15078381 Msa0058600:CDS
AGCCCTTTGTGCAAGCAAAT+AGG 0.456513 1_2:-15081028 None:intergenic
CCATCAACAGAATACTTTGA+AGG 0.459522 1_2:-15080619 None:intergenic
GTTTATCCATGGTTATTTGG+AGG 0.464111 1_2:+15084166 Msa0058600:three_prime_UTR
ATAGAAAATGATAAAACATC+AGG 0.465475 1_2:-15082670 None:intergenic
AAAGTATTCTGTTGATGGAC+AGG 0.466460 1_2:+15080624 Msa0058600:CDS
TTGCTTGCACAAAGGGCTGC+AGG 0.469589 1_2:+15081033 Msa0058600:CDS
TTGCAAGGAAGATTACTTAA+GGG 0.474428 1_2:-15080580 None:intergenic
CAAGAGCATTCTTGCCTGGT+TGG 0.476744 1_2:+15080986 Msa0058600:CDS
CCAATTAAGCCCTTCTCTGA+TGG 0.476760 1_2:-15080923 None:intergenic
AGCAATGGTGTTAAGGTGTC+TGG 0.483283 1_2:-15080826 None:intergenic
TGCCACATGTGAAACCCATA+TGG 0.487704 1_2:+15083809 Msa0058600:CDS
TTGCGGTATCGCTGAAAACT+CGG 0.488849 1_2:-15079495 None:intergenic
ATTTCAAGAGCATTCTTGCC+TGG 0.489166 1_2:+15080982 Msa0058600:CDS
ACAAATGTAAGGACTAGATT+GGG 0.493278 1_2:+15084144 Msa0058600:three_prime_UTR
GACTAGATTGGGTTTATCCA+TGG 0.495558 1_2:+15084155 Msa0058600:three_prime_UTR
CCTACCACGCCAATGGTGTA+AGG 0.498310 1_2:-15079367 None:intergenic
GAAATTCTATGTGAGGAGTA+GGG 0.499323 1_2:-15080964 None:intergenic
TGAAATTCTATGTGAGGAGT+AGG 0.500143 1_2:-15080965 None:intergenic
TGGAGAGATCCAAATTATTG+AGG 0.501224 1_2:+15080510 Msa0058600:CDS
TTAACAAGAGCATCCATGCT+TGG 0.501936 1_2:-15082643 None:intergenic
GAAACCAGCATACAAATGTA+AGG 0.503260 1_2:+15084133 Msa0058600:intron
TTACTTCTGGCAGGTATGCA+TGG 0.505297 1_2:+15083772 Msa0058600:intron
ATTGGATTCAATAACTCTCA+AGG 0.506992 1_2:-15079302 None:intergenic
AGGATGAAAACCGCAAGCAT+TGG 0.510037 1_2:+15079523 Msa0058600:CDS
AACTTACAGATTCGACAGTA+CGG 0.510427 1_2:+15080185 Msa0058600:intron
ACCGCCCAGATATGTATGTA+AGG 0.515100 1_2:-15078434 None:intergenic
AATCGTTGGTGCACCAAGCA+TGG 0.515353 1_2:+15082630 Msa0058600:CDS
TGCAGTCGTCCCAATGCTTG+CGG 0.517908 1_2:-15079533 None:intergenic
ACGCCTGCGGTGCCATAACC+AGG 0.521569 1_2:-15078373 None:intergenic
ATAATTTGGATCTCTCCATA+AGG 0.522393 1_2:-15080505 None:intergenic
GGTGCGTATGTAAATGCAAC+TGG 0.523461 1_2:+15083114 Msa0058600:CDS
ATTCACATATGAGTCAGATC+AGG 0.524093 1_2:+15080780 Msa0058600:CDS
GTTGTTGTTGTTGTCATCAT+CGG 0.524463 1_2:-15077152 None:intergenic
TGGAACGAATGAGTGATTGA+TGG 0.525094 1_2:-15080717 None:intergenic
GGCACCGCAGGCGTCGTCCC+GGG 0.527337 1_2:+15078382 Msa0058600:CDS
CCCCATATGGGTTTCACATG+TGG 0.529870 1_2:-15083811 None:intergenic
GTTGACGTTCCTTACACCAT+TGG 0.538392 1_2:+15079358 Msa0058600:CDS
AGTCCTGGTTATGGCACCGC+AGG 0.541575 1_2:+15078370 Msa0058600:intron
GCAATTCTTCGAGATCGAGC+TGG 0.553019 1_2:-15077096 None:intergenic
AGGAGTTGTGCTCTTTCCTG+GGG 0.553657 1_2:+15079270 Msa0058600:intron
GCTTTCGCTTAAGACGGTGT+TGG 0.556837 1_2:+15080255 Msa0058600:CDS
TAATTGAGGATTACAAACAT+TGG 0.558098 1_2:-15084233 None:intergenic
GCATCCTTACATACATATCT+GGG 0.559575 1_2:+15078430 Msa0058600:CDS
AAACAATCCTCCATCAGAGA+AGG 0.563310 1_2:+15080913 Msa0058600:CDS
TGTTTCTGAATCTACAAGGC+AGG 0.563311 1_2:+15082708 Msa0058600:CDS
AATTCGATGTAAAATCTGCC+AGG 0.564880 1_2:+15082801 Msa0058600:CDS
ACTTACAGATTCGACAGTAC+GGG 0.570721 1_2:+15080186 Msa0058600:intron
CAGTACGGGCGCCTAGAGGA+TGG 0.572399 1_2:+15080200 Msa0058600:CDS
CAAATGGATTAGCTCTAACT+GGG 0.573810 1_2:+15083169 Msa0058600:CDS
TGCAAAGCGGAGTGATATGC+TGG 0.576040 1_2:+15083068 Msa0058600:CDS
CATTCAACGAACCATCCTCT+AGG 0.576324 1_2:-15080211 None:intergenic
AACACACTGGCACGGTTGCA+AGG 0.577040 1_2:-15080595 None:intergenic
AGCATGAATATTGATGATAC+AGG 0.577675 1_2:+15083977 Msa0058600:three_prime_UTR
ACATACCATCGCGAACTCCA+AGG 0.577866 1_2:+15080536 Msa0058600:CDS
TCAGCGATACCGCAAATCGT+AGG 0.579115 1_2:+15079503 Msa0058600:CDS
GCCACATGTGAAACCCATAT+GGG 0.579463 1_2:+15083810 Msa0058600:CDS
AAATTCTATGTGAGGAGTAG+GGG 0.580319 1_2:-15080963 None:intergenic
GGATCTCATATAGATTGCGT+AGG 0.582958 1_2:+15082749 Msa0058600:CDS
ATGTCTAGTGAAGGCCCTGT+TGG 0.586333 1_2:+15083093 Msa0058600:CDS
GTTCATGATCTGTAGATATG+TGG 0.588117 1_2:+15082602 Msa0058600:intron
ACTCCTATTTGCTTGCACAA+AGG 0.591007 1_2:+15081025 Msa0058600:CDS
CAAAATATAGTTGGTTTCCG+GGG 0.591312 1_2:+15083202 Msa0058600:CDS
ATTAAGCCCTTCTCTGATGG+AGG 0.592131 1_2:-15080920 None:intergenic
TACCTGTTTCTGAATCTACA+AGG 0.597932 1_2:+15082704 Msa0058600:CDS
CGGTGTTGGATCGATGTGGA+AGG 0.598035 1_2:+15080269 Msa0058600:CDS
TTGGATTCAATAACTCTCAA+GGG 0.598542 1_2:-15079301 None:intergenic
TGAGATAACGACTTTGTACA+AGG 0.599821 1_2:+15083146 Msa0058600:CDS
AACAATCCTCCATCAGAGAA+GGG 0.602387 1_2:+15080914 Msa0058600:CDS
TGCTCTTGAAATTCTATGTG+AGG 0.603043 1_2:-15080971 None:intergenic
TCGTTGAATGTGGTCACTCG+TGG 0.603436 1_2:+15080224 Msa0058600:CDS
TTCACCCGGGACGACGCCTG+CGG 0.608625 1_2:-15078386 None:intergenic
CTCAAGGGAAGAGTAGCCCC+AGG 0.609607 1_2:-15079286 None:intergenic
AGAGGATGGTTCGTTGAATG+TGG 0.609930 1_2:+15080214 Msa0058600:CDS
CATACCATCGCGAACTCCAA+GGG 0.610151 1_2:+15080537 Msa0058600:CDS
ATGTTGAAGACACACATCAC+AGG 0.621960 1_2:+15078561 Msa0058600:CDS
TTGGATCGATGTGGAAGGAG+TGG 0.625144 1_2:+15080274 Msa0058600:CDS
GATCTCATATAGATTGCGTA+GGG 0.626453 1_2:+15082750 Msa0058600:CDS
GGATTTACCTACCACGCCAA+TGG 0.626908 1_2:-15079374 None:intergenic
ATAACACCTCCAAATAACCA+TGG 0.630379 1_2:-15084172 None:intergenic
TTGAAGGCAACACACTGGCA+CGG 0.631838 1_2:-15080603 None:intergenic
AACATACGATATACCCAACC+AGG 0.631908 1_2:-15081000 None:intergenic
AACAACGCTTTCGCTTAAGA+CGG 0.633073 1_2:+15080249 Msa0058600:CDS
GTATTGTAAGTGAATTCACC+CGG 0.633782 1_2:-15078400 None:intergenic
TGTCATCATCGGAAGAATCG+TGG 0.635083 1_2:-15077141 None:intergenic
GCATCCCTTGGAGTTCGCGA+TGG 0.645866 1_2:-15080541 None:intergenic
ATACTTTGAAGGCAACACAC+TGG 0.657192 1_2:-15080608 None:intergenic
AAGCATTGGGACGACTGCAG+AGG 0.657758 1_2:+15079537 Msa0058600:CDS
CATTTACATACGCACCAACA+GGG 0.660144 1_2:-15083107 None:intergenic
CATGTGAAACCCATATGGGG+TGG 0.666966 1_2:+15083814 Msa0058600:CDS
TCGACAGTACGGGCGCCTAG+AGG 0.677937 1_2:+15080196 Msa0058600:CDS
TGTAGATTATAATTGCAAAG+CGG 0.679418 1_2:+15083055 Msa0058600:intron
CGTTCCTTACACCATTGGCG+TGG 0.682501 1_2:+15079363 Msa0058600:CDS
AAGACGGTGTTGGATCGATG+TGG 0.691734 1_2:+15080265 Msa0058600:CDS
ATGCTGGTGATGTCTAGTGA+AGG 0.693369 1_2:+15083084 Msa0058600:CDS
TATGATGAATCAGCAAGTAG+TGG 0.696041 1_2:+15080748 Msa0058600:CDS
GATATGTGGAAGCAAATCGT+TGG 0.703389 1_2:+15082616 Msa0058600:intron
CCACATGTGAAACCCATATG+GGG 0.708560 1_2:+15083811 Msa0058600:CDS
TCCTTACATACATATCTGGG+CGG 0.722690 1_2:+15078433 Msa0058600:CDS
TATTGTAAGTGAATTCACCC+GGG 0.729958 1_2:-15078399 None:intergenic
TGGACAGGACTCCTTAAACG+AGG 0.758674 1_2:+15080639 Msa0058600:CDS

CRISPR-GE

badsite warning sgRNA_sequence Strand Position Region GC_content
!! TGATATGTTAAATATTTATA+TGG + chr1_2:15081097-15081116 Msa0058600:intron 10.0%
!!! TGTTTTTCTAATATTTATAT+AGG + chr1_2:15082848-15082867 Msa0058600:intron 10.0%
!! ATCTTTATATTTATTGTATA+AGG - chr1_2:15083356-15083375 None:intergenic 10.0%
!! TCTAAATTATTTATTATAAC+TGG - chr1_2:15083382-15083401 None:intergenic 10.0%
!!! AAATCAATAACAATCAATTT+TGG - chr1_2:15077399-15077418 None:intergenic 15.0%
!!! TTTGCATTTATAATCTATTT+TGG - chr1_2:15077777-15077796 None:intergenic 15.0%
!!! CTTTTTTTTTTTTTGACAAA+AGG - chr1_2:15078029-15078048 None:intergenic 15.0%
!!! CTTTTGTCAAAAAAAAAAAA+AGG + chr1_2:15078027-15078046 Msa0058600:intron 15.0%
!! TAAAAATTAGTCAAAAACAT+TGG + chr1_2:15078760-15078779 Msa0058600:intron 15.0%
!! AAAAATTAGTCAAAAACATT+GGG + chr1_2:15078761-15078780 Msa0058600:intron 15.0%
!! AAGAAAATTTATTTCAAAAG+AGG + chr1_2:15078888-15078907 Msa0058600:intron 15.0%
!! TATATTAACAAATAAGATGT+AGG - chr1_2:15080073-15080092 None:intergenic 15.0%
!! AATATTTAACATATCAAAAG+TGG - chr1_2:15081093-15081112 None:intergenic 15.0%
!! ATTCATAACTATATATTTGT+TGG + chr1_2:15081305-15081324 Msa0058600:intron 15.0%
!! TTCATAACTATATATTTGTT+GGG + chr1_2:15081306-15081325 Msa0058600:intron 15.0%
!! ACATATAATTAGTATTAGTA+AGG + chr1_2:15081567-15081586 Msa0058600:intron 15.0%
!! ATACTCAAATTAGAAAAATT+TGG + chr1_2:15081606-15081625 Msa0058600:intron 15.0%
!!! TTTTTGGTTTATCTAATTTT+TGG + chr1_2:15081825-15081844 Msa0058600:intron 15.0%
!!! TATCTAATTTTTGGTTTATT+TGG + chr1_2:15081834-15081853 Msa0058600:intron 15.0%
!!! GATATTTTGTAATATCTTAT+AGG - chr1_2:15082919-15082938 None:intergenic 15.0%
!! GTAAATTGATCTTGTAAAAT+TGG - chr1_2:15077652-15077671 None:intergenic 20.0%
!!! TTCAAGTTTTGTTTTTTTGA+GGG - chr1_2:15077841-15077860 None:intergenic 20.0%
!!! AATGTAAAGTGATTTAAGTT+TGG - chr1_2:15077913-15077932 None:intergenic 20.0%
!! CTTTACATTCAATTCTTATT+TGG + chr1_2:15077924-15077943 Msa0058600:intron 20.0%
!! AATGTAAAATGGTTTATGTT+TGG - chr1_2:15078162-15078181 None:intergenic 20.0%
!! TCAATTCAATTACAAGAATT+TGG + chr1_2:15078202-15078221 Msa0058600:intron 20.0%
!! CAAATAATGAAAACTCAAAT+TGG - chr1_2:15078303-15078322 None:intergenic 20.0%
!!! GTTTTCATTATTTGTTGTTT+TGG + chr1_2:15078309-15078328 Msa0058600:intron 20.0%
!! TTGAAAAATAATTCTTCATC+AGG - chr1_2:15078868-15078887 None:intergenic 20.0%
!! TATTATAAGCAAGGAAAAAA+TGG - chr1_2:15078926-15078945 None:intergenic 20.0%
!! ATTCAATGATATTATAAGCA+AGG - chr1_2:15078935-15078954 None:intergenic 20.0%
!! ATATACTACCTAAAAGAAAT+AGG - chr1_2:15078980-15078999 None:intergenic 20.0%
!!! CTTTTGCCTATTTAATTTTT+TGG + chr1_2:15079080-15079099 Msa0058600:intron 20.0%
!! TACAGTCCAAAAAATTAAAT+AGG - chr1_2:15079089-15079108 None:intergenic 20.0%
!!! AATTAAGAGCATTTATCATA+AGG - chr1_2:15079398-15079417 None:intergenic 20.0%
!! ATAGAACTTCAAAAATGATA+TGG - chr1_2:15079751-15079770 None:intergenic 20.0%
!!! TTATTCTAAAGGAAAGAAAA+AGG - chr1_2:15081258-15081277 None:intergenic 20.0%
!! ACAAATGCTTATTATTCTAA+AGG - chr1_2:15081269-15081288 None:intergenic 20.0%
!!! TTCCGATTTATCTAATTTTT+AGG + chr1_2:15081770-15081789 Msa0058600:intron 20.0%
!!! TCCGATTTATCTAATTTTTA+GGG + chr1_2:15081771-15081790 Msa0058600:intron 20.0%
!! TCCCTAAAAATTAGATAAAT+CGG - chr1_2:15081775-15081794 None:intergenic 20.0%
!!! ATTTATCTAATTTTTAGGGA+AGG + chr1_2:15081775-15081794 Msa0058600:intron 20.0%
!!! TTTATCTAATTTTTAGGGAA+GGG + chr1_2:15081776-15081795 Msa0058600:intron 20.0%
!!! TAGATAAACTGGTTAATTTT+TGG + chr1_2:15081809-15081828 Msa0058600:intron 20.0%
!!! TAATTTTTGGTTTATTTGGT+GGG + chr1_2:15081838-15081857 Msa0058600:intron 20.0%
!! AGAAAATAAGAACAAAACAT+GGG - chr1_2:15081965-15081984 None:intergenic 20.0%
!! AAGAAAATAAGAACAAAACA+TGG - chr1_2:15081966-15081985 None:intergenic 20.0%
!! TTAAGTAGACATAATATTAG+AGG + chr1_2:15082208-15082227 Msa0058600:intron 20.0%
!! TAAGTAGACATAATATTAGA+GGG + chr1_2:15082209-15082228 Msa0058600:intron 20.0%
!!! ATTTTTTAGGTGAAAAACTA+AGG + chr1_2:15082340-15082359 Msa0058600:intron 20.0%
!! ATAGAAAATGATAAAACATC+AGG - chr1_2:15082673-15082692 None:intergenic 20.0%
!! AAATATTAGAAAAACACTTG+AGG - chr1_2:15082844-15082863 None:intergenic 20.0%
!!! AATATACAATCTTTTACTTC+TGG + chr1_2:15083759-15083778 Msa0058600:intron 20.0%
!!! CCATTTTTGATTCAAGTTTA+GGG - chr1_2:15077003-15077022 None:intergenic 25.0%
!!! TCCATTTTTGATTCAAGTTT+AGG - chr1_2:15077004-15077023 None:intergenic 25.0%
!! CAGATATTTGAATTCACTTT+TGG - chr1_2:15077323-15077342 None:intergenic 25.0%
!!! TATTGATTTTAGTGCATGTT+TGG + chr1_2:15077356-15077375 Msa0058600:intron 25.0%
!!! GTTATTGATTTTGACATGTT+TGG + chr1_2:15077408-15077427 Msa0058600:intron 25.0%
! CAAGTTATGATCAATTCTAT+AGG - chr1_2:15077812-15077831 None:intergenic 25.0%
!!! TCAAGTTTTGTTTTTTTGAG+GGG - chr1_2:15077840-15077859 None:intergenic 25.0%
!!! CTTCAAGTTTTGTTTTTTTG+AGG - chr1_2:15077842-15077861 None:intergenic 25.0%
! AATTTGAGCGTAAAAATCAT+TGG - chr1_2:15078124-15078143 None:intergenic 25.0%
! AACATGAGTTCAATGTAAAA+TGG - chr1_2:15078173-15078192 None:intergenic 25.0%
!!! AAGTCAAATTATCTGGTTTT+TGG + chr1_2:15078233-15078252 Msa0058600:intron 25.0%
!!! AGTCAAATTATCTGGTTTTT+GGG + chr1_2:15078234-15078253 Msa0058600:intron 25.0%
!! AAAACTCAAATTGGTCTAAT+GGG - chr1_2:15078294-15078313 None:intergenic 25.0%
! ATGGTCATTTGTACAATTTA+TGG + chr1_2:15078486-15078505 Msa0058600:intron 25.0%
! ATACCTTCAAGACAAAAAAT+CGG - chr1_2:15078623-15078642 None:intergenic 25.0%
!!! AAACACTTTTTTTACAGGAA+GGG + chr1_2:15078784-15078803 Msa0058600:intron 25.0%
!!! ATTTGTTTCTATGTTCGAAT+GGG + chr1_2:15079008-15079027 Msa0058600:intron 25.0%
! ATAAAAATAGAAGTTCTACG+AGG - chr1_2:15079183-15079202 None:intergenic 25.0%
! TTAACTTATTGGAAGAAACA+TGG + chr1_2:15079228-15079247 Msa0058600:intron 25.0%
!! AGTTATTGAATCCAATTTTG+TGG + chr1_2:15079309-15079328 Msa0058600:CDS 25.0%
!!! AACATGTCACTTTATATTTC+AGG - chr1_2:15079870-15079889 None:intergenic 25.0%
!! AAAGACTTTATATTTCAGGT+TGG - chr1_2:15079905-15079924 None:intergenic 25.0%
! AACCTGAAATATAAAGTCTT+TGG + chr1_2:15079904-15079923 Msa0058600:intron 25.0%
! AACCAAAGACTTTATATTTC+AGG - chr1_2:15079909-15079928 None:intergenic 25.0%
! CAAAAGAAATAATAAGACGT+GGG - chr1_2:15080042-15080061 None:intergenic 25.0%
!!! CACGTCTTATTATTTCTTTT+GGG + chr1_2:15080041-15080060 Msa0058600:intron 25.0%
!! TCTCATTTTCTTTCTTTTGT+TGG + chr1_2:15080470-15080489 Msa0058600:intron 25.0%
!! CTCATTTTCTTTCTTTTGTT+GGG + chr1_2:15080471-15080490 Msa0058600:intron 25.0%
!! GTATGTTTTCCTCAATAATT+TGG - chr1_2:15080522-15080541 None:intergenic 25.0%
! TGATTCATCATATTCAAAAC+TGG - chr1_2:15080740-15080759 None:intergenic 25.0%
!!! AAAATCTGGATTCTAGAATA+GGG + chr1_2:15080872-15080891 Msa0058600:CDS 25.0%
!!! ACTAAGTCTTGTTTTTATAG+AGG + chr1_2:15081151-15081170 Msa0058600:intron 25.0%
!!! TAGTGTTTTGGTACAATAAA+TGG + chr1_2:15081347-15081366 Msa0058600:intron 25.0%
!!! AGTGTTTTGGTACAATAAAT+GGG + chr1_2:15081348-15081367 Msa0058600:intron 25.0%
! TTGAGTATATATATTGAACC+TGG - chr1_2:15081594-15081613 None:intergenic 25.0%
!!! CTAATTTTTGGTTTATTTGG+TGG + chr1_2:15081837-15081856 Msa0058600:intron 25.0%
! AAAATAAGAACAAAACATGG+GGG - chr1_2:15081963-15081982 None:intergenic 25.0%
! GAAAATAAGAACAAAACATG+GGG - chr1_2:15081964-15081983 None:intergenic 25.0%
! CTTAATATGACAATCTTTGT+GGG - chr1_2:15082174-15082193 None:intergenic 25.0%
! ACTTAATATGACAATCTTTG+TGG - chr1_2:15082175-15082194 None:intergenic 25.0%
! TGTGAATGTGACAATTATTA+TGG + chr1_2:15082305-15082324 Msa0058600:intron 25.0%
! GTGAATGTGACAATTATTAT+GGG + chr1_2:15082306-15082325 Msa0058600:intron 25.0%
!! TTTTTGCTTATAAATGTGAC+CGG - chr1_2:15082486-15082505 None:intergenic 25.0%
! TAAGCAAAAAACAACTTCTT+AGG - chr1_2:15082476-15082495 None:intergenic 25.0%
!! TTTTTGCTTATAAATGTGAC+CGG + chr1_2:15082486-15082505 Msa0058600:intron 25.0%
! TGTAGATTATAATTGCAAAG+CGG + chr1_2:15083055-15083074 Msa0058600:intron 25.0%
!! TACAAAATATAGTTGGTTTC+CGG + chr1_2:15083200-15083219 Msa0058600:CDS 25.0%
!! TACTATTTCTTGTTATGTGT+TGG + chr1_2:15083270-15083289 Msa0058600:intron 25.0%
!! ACTATTTCTTGTTATGTGTT+GGG + chr1_2:15083271-15083290 Msa0058600:intron 25.0%
! CATTATAAAGAAGATCAAAG+TGG - chr1_2:15083486-15083505 None:intergenic 25.0%
! AGCATAAATGAAGGAAAAAT+GGG - chr1_2:15083527-15083546 None:intergenic 25.0%
! AAGCATAAATGAAGGAAAAA+TGG - chr1_2:15083528-15083547 None:intergenic 25.0%
!!! ACTTTTTCCAGTTGTATAAA+AGG - chr1_2:15084020-15084039 None:intergenic 25.0%
!!! TTATTTGGAGGTGTTATATT+TGG + chr1_2:15084178-15084197 Msa0058600:three_prime_UTR 25.0%
!!! TATTTGGAGGTGTTATATTT+GGG + chr1_2:15084179-15084198 Msa0058600:three_prime_UTR 25.0%
!!! TTGGCTTTTGAATGTTTATA+TGG - chr1_2:15084217-15084236 None:intergenic 25.0%
! TAATTGAGGATTACAAACAT+TGG - chr1_2:15084236-15084255 None:intergenic 25.0%
!! TTGATTCAAGTTTAGGGTTT+TGG - chr1_2:15076997-15077016 None:intergenic 30.0%
CCCTAAACTTGAATCAAAAA+TGG + chr1_2:15077000-15077019 Msa0058600:exon 30.0%
TGAAAGAGGGAAAATTACAT+AGG - chr1_2:15077190-15077209 None:intergenic 30.0%
GATAGAAACGAATTGAAAGA+GGG - chr1_2:15077203-15077222 None:intergenic 30.0%
TGATAGAAACGAATTGAAAG+AGG - chr1_2:15077204-15077223 None:intergenic 30.0%
!!! TTTTTGTATGTTTGGTTCTG+CGG - chr1_2:15077998-15078017 None:intergenic 30.0%
AAAAAAAAAGGTAGAGTCCT+AGG + chr1_2:15078039-15078058 Msa0058600:intron 30.0%
ATCAAAATCAATTCCAACCT+AGG - chr1_2:15078059-15078078 None:intergenic 30.0%
ATGCAAAAGCTACTATTCTT+AGG - chr1_2:15078101-15078120 None:intergenic 30.0%
GCAATAGAAGTCAAATTATC+TGG + chr1_2:15078226-15078245 Msa0058600:intron 30.0%
! GAAAACTCAAATTGGTCTAA+TGG - chr1_2:15078295-15078314 None:intergenic 30.0%
TTGTTGTACTTCGTCATTTA+TGG + chr1_2:15078467-15078486 Msa0058600:intron 30.0%
GTCATTTGTACAATTTATGG+TGG + chr1_2:15078489-15078508 Msa0058600:intron 30.0%
TTCAAGACAAAAAATCGGAA+GGG - chr1_2:15078618-15078637 None:intergenic 30.0%
! GCTGTCAATTTCATTTTAAG+AGG - chr1_2:15078694-15078713 None:intergenic 30.0%
!!! TTGGGAAACACTTTTTTTAC+AGG + chr1_2:15078779-15078798 Msa0058600:intron 30.0%
!!! GAAACACTTTTTTTACAGGA+AGG + chr1_2:15078783-15078802 Msa0058600:intron 30.0%
AAGGGAAACATATAAGCATT+TGG + chr1_2:15078802-15078821 Msa0058600:intron 30.0%
!!! ACATATAAGCATTTGGCTTT+TGG + chr1_2:15078809-15078828 Msa0058600:intron 30.0%
!!! CATATAAGCATTTGGCTTTT+GGG + chr1_2:15078810-15078829 Msa0058600:intron 30.0%
!!! ATATAAGCATTTGGCTTTTG+GGG + chr1_2:15078811-15078830 Msa0058600:intron 30.0%
TTATTTCAAAAGAGGCTTCA+TGG + chr1_2:15078896-15078915 Msa0058600:intron 30.0%
TCGAACATAGAAACAAATCA+GGG - chr1_2:15079006-15079025 None:intergenic 30.0%
TTCGAACATAGAAACAAATC+AGG - chr1_2:15079007-15079026 None:intergenic 30.0%
!! GATTTGTTTCTATGTTCGAA+TGG + chr1_2:15079007-15079026 Msa0058600:intron 30.0%
TTGGATTCAATAACTCTCAA+GGG - chr1_2:15079304-15079323 None:intergenic 30.0%
ATTGGATTCAATAACTCTCA+AGG - chr1_2:15079305-15079324 None:intergenic 30.0%
AAAAACAACAAGAGACTCTA+TGG - chr1_2:15079429-15079448 None:intergenic 30.0%
TTAATAGCACAATGATTGAG+AGG - chr1_2:15079568-15079587 None:intergenic 30.0%
AATTAGCATTCCATAGAGAT+TGG + chr1_2:15079706-15079725 Msa0058600:intron 30.0%
!! TATTTCAGGTTGGATGTAAA+AGG - chr1_2:15079856-15079875 None:intergenic 30.0%
!! TGTCACTTTATATTTCAGGT+TGG - chr1_2:15079866-15079885 None:intergenic 30.0%
!! TATTTCAGGTTGGATGTAAA+GGG - chr1_2:15079856-15079875 None:intergenic 30.0%
!! ATATTTCAGGTTGGATGTAA+AGG - chr1_2:15079857-15079876 None:intergenic 30.0%
! AGGTTTTGCAGAATTATATG+TGG - chr1_2:15079986-15080005 None:intergenic 30.0%
CCAAAAGAAATAATAAGACG+TGG - chr1_2:15080043-15080062 None:intergenic 30.0%
!! CCACGTCTTATTATTTCTTT+TGG + chr1_2:15080040-15080059 Msa0058600:intron 30.0%
! CTGATTTTCATATTCAGCAT+TGG + chr1_2:15080098-15080117 Msa0058600:intron 30.0%
!! ATTTTCATATTCAGCATTGG+TGG + chr1_2:15080101-15080120 Msa0058600:intron 30.0%
!!! TTTTCATATTCAGCATTGGT+GGG + chr1_2:15080102-15080121 Msa0058600:intron 30.0%
! TCTTCACATGCATTTTATGT+TGG + chr1_2:15080427-15080446 Msa0058600:intron 30.0%
ATAATTTGGATCTCTCCATA+AGG - chr1_2:15080508-15080527 None:intergenic 30.0%
TTGCAAGGAAGATTACTTAA+GGG - chr1_2:15080583-15080602 None:intergenic 30.0%
!! GATTTTCTGCATCTTTTTCA+TGG - chr1_2:15080858-15080877 None:intergenic 30.0%
TGAAAAAGATGCAGAAAATC+TGG + chr1_2:15080858-15080877 Msa0058600:CDS 30.0%
!! GAAAATCTGGATTCTAGAAT+AGG + chr1_2:15080871-15080890 Msa0058600:CDS 30.0%
!! CTTAATCTAGCTTAGTGTTT+TGG + chr1_2:15081335-15081354 Msa0058600:intron 30.0%
AAGGTCACAAATTCAATTCA+TGG + chr1_2:15081408-15081427 Msa0058600:intron 30.0%
AATTAGTATTAGTAAGGTCC+AGG + chr1_2:15081573-15081592 Msa0058600:intron 30.0%
CTAATGTAGTAGTGAACAAT+AGG - chr1_2:15081633-15081652 None:intergenic 30.0%
! TGGGATCTTATTCCAATTTT+TGG + chr1_2:15081857-15081876 Msa0058600:intron 30.0%
!!! TATTCCAATTTTTGGTTCTG+AGG + chr1_2:15081865-15081884 Msa0058600:intron 30.0%
!!! ATTCCAATTTTTGGTTCTGA+GGG + chr1_2:15081866-15081885 Msa0058600:intron 30.0%
AAATAAGAACAAAACATGGG+GGG - chr1_2:15081962-15081981 None:intergenic 30.0%
! TGTAGATAATTTTGTGGTTG+TGG + chr1_2:15082010-15082029 Msa0058600:intron 30.0%
ACATGATCGTATACTCAAAT+AGG - chr1_2:15082042-15082061 None:intergenic 30.0%
TTTGAGTATACGATCATGTA+TGG + chr1_2:15082043-15082062 Msa0058600:intron 30.0%
! ACTAAAAGTGACACTCTTTT+TGG + chr1_2:15082269-15082288 Msa0058600:intron 30.0%
! CTAAAAGTGACACTCTTTTT+GGG + chr1_2:15082270-15082289 Msa0058600:intron 30.0%
CATTGAATGACTAATGTATC+CGG + chr1_2:15082412-15082431 Msa0058600:intron 30.0%
! TTCAGAAACAGGTATTTTAC+TGG - chr1_2:15082698-15082717 None:intergenic 30.0%
TTAGAAAAACACTTGAGGAT+TGG - chr1_2:15082839-15082858 None:intergenic 30.0%
ATAGGATATTCTAGCGTAAT+AGG + chr1_2:15082866-15082885 Msa0058600:intron 30.0%
! CAACTATATTTTGTAAGTGC+TGG - chr1_2:15083195-15083214 None:intergenic 30.0%
CAGCACTTACAAAATATAGT+TGG + chr1_2:15083193-15083212 Msa0058600:CDS 30.0%
! ACAAAATATAGTTGGTTTCC+GGG + chr1_2:15083201-15083220 Msa0058600:CDS 30.0%
! CTATTTCTTGTTATGTGTTG+GGG + chr1_2:15083272-15083291 Msa0058600:intron 30.0%
! TATAACTGGTAGTGATAACA+TGG - chr1_2:15083308-15083327 None:intergenic 30.0%
GTATAAGGTTATCGTTTATG+TGG - chr1_2:15083341-15083360 None:intergenic 30.0%
GTAGTTCAAAGCATAAATGA+AGG - chr1_2:15083536-15083555 None:intergenic 30.0%
! AACTGAAACCTAAGTCATTT+TGG + chr1_2:15083859-15083878 Msa0058600:CDS 30.0%
!! ACTGAAACCTAAGTCATTTT+GGG + chr1_2:15083860-15083879 Msa0058600:CDS 30.0%
TTCATGCTGCAATATGAATA+TGG - chr1_2:15083965-15083984 None:intergenic 30.0%
! AGCATGAATATTGATGATAC+AGG + chr1_2:15083977-15083996 Msa0058600:three_prime_UTR 30.0%
! TTACTTGCCTTTTATACAAC+TGG + chr1_2:15084010-15084029 Msa0058600:three_prime_UTR 30.0%
TTCTGCAATTGTAATTGAGT+TGG + chr1_2:15084089-15084108 Msa0058600:intron 30.0%
TACAAATGTAAGGACTAGAT+TGG + chr1_2:15084143-15084162 Msa0058600:three_prime_UTR 30.0%
ACAAATGTAAGGACTAGATT+GGG + chr1_2:15084144-15084163 Msa0058600:three_prime_UTR 30.0%
! GTTGTTGTTGTTGTCATCAT+CGG - chr1_2:15077155-15077174 None:intergenic 35.0%
GACTTGAAGCTAGAAATTTG+TGG + chr1_2:15077469-15077488 Msa0058600:intron 35.0%
AGTTGAAGGTAAAGTGAGTT+AGG - chr1_2:15077614-15077633 None:intergenic 35.0%
TCTCGCTAAAAGTTAGTTGA+AGG - chr1_2:15077628-15077647 None:intergenic 35.0%
! TGTATGTTTGCTTCCACTTT+TGG + chr1_2:15077746-15077765 Msa0058600:intron 35.0%
!!! TATTTTGGCTTCTCCAAAAG+TGG - chr1_2:15077762-15077781 None:intergenic 35.0%
GCAGAACCAAACATACAAAA+AGG + chr1_2:15077997-15078016 Msa0058600:intron 35.0%
GAACCAAACATACAAAAAGG+TGG + chr1_2:15078000-15078019 Msa0058600:intron 35.0%
! ACTCCACCTTTTTGTATGTT+TGG - chr1_2:15078006-15078025 None:intergenic 35.0%
TGTTTGCAATACAATAGTCC+TGG + chr1_2:15078355-15078374 Msa0058600:intron 35.0%
CAATACAATAGTCCTGGTTA+TGG + chr1_2:15078361-15078380 Msa0058600:intron 35.0%
TATTGTAAGTGAATTCACCC+GGG - chr1_2:15078402-15078421 None:intergenic 35.0%
GTATTGTAAGTGAATTCACC+CGG - chr1_2:15078403-15078422 None:intergenic 35.0%
AGCATCCTTACATACATATC+TGG + chr1_2:15078429-15078448 Msa0058600:CDS 35.0%
GCATCCTTACATACATATCT+GGG + chr1_2:15078430-15078449 Msa0058600:CDS 35.0%
!! AATTTATGGTGGTTTCTAGC+TGG + chr1_2:15078500-15078519 Msa0058600:intron 35.0%
CTTCAAGACAAAAAATCGGA+AGG - chr1_2:15078619-15078638 None:intergenic 35.0%
!!! CTTCCGATTTTTTGTCTTGA+AGG + chr1_2:15078617-15078636 Msa0058600:CDS 35.0%
ATCCTTCATGGATTTGAGTA+TGG + chr1_2:15078650-15078669 Msa0058600:intron 35.0%
TCTTCATCAGGCAACTAATA+TGG - chr1_2:15078856-15078875 None:intergenic 35.0%
!!! TTTTTTGTTTGCTTTTCCCC+AGG + chr1_2:15078954-15078973 Msa0058600:intron 35.0%
TACCTAAAAGAAATAGGCCT+GGG - chr1_2:15078974-15078993 None:intergenic 35.0%
CGAACATAGAAACAAATCAG+GGG - chr1_2:15079005-15079024 None:intergenic 35.0%
AATGTGGTGCAGAATGAAAA+AGG - chr1_2:15079052-15079071 None:intergenic 35.0%
GCATGCAAGTGTTAACTTAT+TGG + chr1_2:15079217-15079236 Msa0058600:intron 35.0%
GACTAATCCTTGCAATATTC+AGG + chr1_2:15079250-15079269 Msa0058600:intron 35.0%
ATATTACCTCGAAAAGTCGT+TGG + chr1_2:15079617-15079636 Msa0058600:intron 35.0%
! AAAAGTCGTTGGTGTTTGTT+AGG + chr1_2:15079628-15079647 Msa0058600:intron 35.0%
!! TTTCATATTCAGCATTGGTG+GGG + chr1_2:15080103-15080122 Msa0058600:intron 35.0%
AACTTACAGATTCGACAGTA+CGG + chr1_2:15080185-15080204 Msa0058600:intron 35.0%
TGGAGAGATCCAAATTATTG+AGG + chr1_2:15080510-15080529 Msa0058600:CDS 35.0%
!!! AATTTTCCAAAAGCATCCCT+TGG - chr1_2:15080556-15080575 None:intergenic 35.0%
GTTGCAAGGAAGATTACTTA+AGG - chr1_2:15080584-15080603 None:intergenic 35.0%
CCATCAACAGAATACTTTGA+AGG - chr1_2:15080622-15080641 None:intergenic 35.0%
! CCTTCAAAGTATTCTGTTGA+TGG + chr1_2:15080619-15080638 Msa0058600:CDS 35.0%
! AAAGTATTCTGTTGATGGAC+AGG + chr1_2:15080624-15080643 Msa0058600:CDS 35.0%
TGTTTCACTTTCCTCGTTTA+AGG - chr1_2:15080653-15080672 None:intergenic 35.0%
TATGATGAATCAGCAAGTAG+TGG + chr1_2:15080748-15080767 Msa0058600:CDS 35.0%
ATTCACATATGAGTCAGATC+AGG + chr1_2:15080780-15080799 Msa0058600:CDS 35.0%
AAATTCTATGTGAGGAGTAG+GGG - chr1_2:15080966-15080985 None:intergenic 35.0%
GAAATTCTATGTGAGGAGTA+GGG - chr1_2:15080967-15080986 None:intergenic 35.0%
TGAAATTCTATGTGAGGAGT+AGG - chr1_2:15080968-15080987 None:intergenic 35.0%
TGCTCTTGAAATTCTATGTG+AGG - chr1_2:15080974-15080993 None:intergenic 35.0%
! AAGCTCTGATCAGAAAACTA+TGG - chr1_2:15081205-15081224 None:intergenic 35.0%
CCATATCATTTGCAACAGAT+TGG - chr1_2:15081436-15081455 None:intergenic 35.0%
CCAATCTGTTGCAAATGATA+TGG + chr1_2:15081433-15081452 Msa0058600:intron 35.0%
!! ATTGCCCTTTTTAGTGCTTT+GGG + chr1_2:15081537-15081556 Msa0058600:intron 35.0%
! TTGTCCCAAAGCACTAAAAA+GGG - chr1_2:15081544-15081563 None:intergenic 35.0%
! ATTGTCCCAAAGCACTAAAA+AGG - chr1_2:15081545-15081564 None:intergenic 35.0%
!! ATTGTGATGGATATAGAGAG+AGG - chr1_2:15081714-15081733 None:intergenic 35.0%
GTTGCCTTTCTTTAAACTCT+GGG - chr1_2:15081741-15081760 None:intergenic 35.0%
GAACACTTGTGTAGATAAAC+TGG + chr1_2:15081798-15081817 Msa0058600:intron 35.0%
AAACCCTCAGAACCAAAAAT+TGG - chr1_2:15081872-15081891 None:intergenic 35.0%
AATAAGAACAAAACATGGGG+GGG - chr1_2:15081961-15081980 None:intergenic 35.0%
! GCGTGTTGTAGATAATTTTG+TGG + chr1_2:15082004-15082023 Msa0058600:intron 35.0%
GATCGTATACTCAAATAGGT+TGG - chr1_2:15082038-15082057 None:intergenic 35.0%
TTATGTGACATGATCCTTCA+AGG + chr1_2:15082081-15082100 Msa0058600:intron 35.0%
TATGTGACATGATCCTTCAA+GGG + chr1_2:15082082-15082101 Msa0058600:intron 35.0%
TCACCTAAAAAATACTCCCT+CGG - chr1_2:15082333-15082352 None:intergenic 35.0%
ATGTATCCGGTCACATTTAT+AGG + chr1_2:15082425-15082444 Msa0058600:intron 35.0%
ATCTGACCTATAAATGTGAC+CGG - chr1_2:15082434-15082453 None:intergenic 35.0%
GTTCATGATCTGTAGATATG+TGG + chr1_2:15082602-15082621 Msa0058600:intron 35.0%
!! TACCTGTTTCTGAATCTACA+AGG + chr1_2:15082704-15082723 Msa0058600:CDS 35.0%
GATCTCATATAGATTGCGTA+GGG + chr1_2:15082750-15082769 Msa0058600:CDS 35.0%
AATTCGATGTAAAATCTGCC+AGG + chr1_2:15082801-15082820 Msa0058600:CDS 35.0%
TTTCCAACTTTCATCAAGTG+CGG + chr1_2:15082999-15083018 Msa0058600:intron 35.0%
TGAGATAACGACTTTGTACA+AGG + chr1_2:15083146-15083165 Msa0058600:CDS 35.0%
!! CAAATGGATTAGCTCTAACT+GGG + chr1_2:15083169-15083188 Msa0058600:CDS 35.0%
! CAAAATATAGTTGGTTTCCG+GGG + chr1_2:15083202-15083221 Msa0058600:CDS 35.0%
CATCCACCAGAAATGAAAAT+GGG - chr1_2:15083238-15083257 None:intergenic 35.0%
GTGGATGATACAGTTATAAC+TGG - chr1_2:15083322-15083341 None:intergenic 35.0%
AAAGAAGATCAAAGTGGCAT+TGG - chr1_2:15083480-15083499 None:intergenic 35.0%
TGAGGTTCAACTTAATTCTG+AGG - chr1_2:15083564-15083583 None:intergenic 35.0%
! TTGTAAGGTGGTGAATTTTG+AGG - chr1_2:15083582-15083601 None:intergenic 35.0%
CATAATAAGAGGTTGTAAGG+TGG - chr1_2:15083594-15083613 None:intergenic 35.0%
GTGCATAATAAGAGGTTGTA+AGG - chr1_2:15083597-15083616 None:intergenic 35.0%
CAACTTATATTGCAGAGCTT+TGG - chr1_2:15083637-15083656 None:intergenic 35.0%
TCACAAGGATCAAATATCAC+TGG - chr1_2:15083667-15083686 None:intergenic 35.0%
CTAAATCTATCAGGATCACA+AGG - chr1_2:15083682-15083701 None:intergenic 35.0%
GTTGAGAGACTAAATCTATC+AGG - chr1_2:15083691-15083710 None:intergenic 35.0%
! TACAATCTTTTACTTCTGGC+AGG + chr1_2:15083763-15083782 Msa0058600:intron 35.0%
! AGGTTTCAGTTTTCTGTTTG+TGG - chr1_2:15083850-15083869 None:intergenic 35.0%
!! CTGAAACCTAAGTCATTTTG+GGG + chr1_2:15083861-15083880 Msa0058600:CDS 35.0%
TTGCAGTACTAGTGAACATT+TGG + chr1_2:15083935-15083954 Msa0058600:three_prime_UTR 35.0%
AAGTAAAAAGTTCCAGACGA+TGG + chr1_2:15084036-15084055 Msa0058600:three_prime_UTR 35.0%
!! CATTTGTATGCTGGTTTCAA+CGG - chr1_2:15084131-15084150 None:intergenic 35.0%
GAAACCAGCATACAAATGTA+AGG + chr1_2:15084133-15084152 Msa0058600:intron 35.0%
TAGTCCTTACATTTGTATGC+TGG - chr1_2:15084140-15084159 None:intergenic 35.0%
TGGGTTTATCCATGGTTATT+TGG + chr1_2:15084163-15084182 Msa0058600:three_prime_UTR 35.0%
GTTTATCCATGGTTATTTGG+AGG + chr1_2:15084166-15084185 Msa0058600:three_prime_UTR 35.0%
ATAACACCTCCAAATAACCA+TGG - chr1_2:15084175-15084194 None:intergenic 35.0%
! AGGTGTTATATTTGGGTGTT+GGG + chr1_2:15084186-15084205 Msa0058600:three_prime_UTR 35.0%
CTAGCTTCAAGTCATACTCT+TGG - chr1_2:15077462-15077481 None:intergenic 40.0%
AAAAAGGTAGAGTCCTAGGT+TGG + chr1_2:15078043-15078062 Msa0058600:intron 40.0%
TCCTTACATACATATCTGGG+CGG + chr1_2:15078433-15078452 Msa0058600:CDS 40.0%
ATGTTGAAGACACACATCAC+AGG + chr1_2:15078561-15078580 Msa0058600:CDS 40.0%
! ACATCACAGGTCAACGTTTT+TGG + chr1_2:15078574-15078593 Msa0058600:CDS 40.0%
CACCATACTCAAATCCATGA+AGG - chr1_2:15078655-15078674 None:intergenic 40.0%
TGGATTTGAGTATGGTGCTT+TGG + chr1_2:15078658-15078677 Msa0058600:intron 40.0%
AACTGCATGTCTGTTAAAGC+AGG - chr1_2:15078741-15078760 None:intergenic 40.0%
TTTCAAAAGAGGCTTCATGG+TGG + chr1_2:15078899-15078918 Msa0058600:intron 40.0%
ACCTAAAAGAAATAGGCCTG+GGG - chr1_2:15078973-15078992 None:intergenic 40.0%
CTACCTAAAAGAAATAGGCC+TGG - chr1_2:15078975-15078994 None:intergenic 40.0%
!! TGTTCGAATGGGATTTGTTG+TGG + chr1_2:15079019-15079038 Msa0058600:intron 40.0%
TTCATTCTGCACCACATTCT+TGG + chr1_2:15079054-15079073 Msa0058600:intron 40.0%
TCATTCTGCACCACATTCTT+GGG + chr1_2:15079055-15079074 Msa0058600:intron 40.0%
CTTGCATGCATAACATGATG+AGG - chr1_2:15079206-15079225 None:intergenic 40.0%
CACAACTCCTGAATATTGCA+AGG - chr1_2:15079260-15079279 None:intergenic 40.0%
! GGTTTTCATCCTACGATTTG+CGG - chr1_2:15079515-15079534 None:intergenic 40.0%
CATAGTCATGCCAATCTCTA+TGG - chr1_2:15079719-15079738 None:intergenic 40.0%
CATAGAGATTGGCATGACTA+TGG + chr1_2:15079717-15079736 Msa0058600:intron 40.0%
AATTCTGCAAAACCTGTCTG+AGG + chr1_2:15079991-15080010 Msa0058600:intron 40.0%
ACTTACAGATTCGACAGTAC+GGG + chr1_2:15080186-15080205 Msa0058600:intron 40.0%
AACAACGCTTTCGCTTAAGA+CGG + chr1_2:15080249-15080268 Msa0058600:CDS 40.0%
!! TGGGATGTTTCTTAGCCTTA+TGG + chr1_2:15080490-15080509 Msa0058600:intron 40.0%
! ATACTTTGAAGGCAACACAC+TGG - chr1_2:15080611-15080630 None:intergenic 40.0%
TGGAACGAATGAGTGATTGA+TGG - chr1_2:15080720-15080739 None:intergenic 40.0%
GGTGTCTGGTGTATTTAGAT+TGG - chr1_2:15080815-15080834 None:intergenic 40.0%
! TTTTCATGGTCAGGTAGCAA+TGG - chr1_2:15080844-15080863 None:intergenic 40.0%
!! TCTGCATCTTTTTCATGGTC+AGG - chr1_2:15080853-15080872 None:intergenic 40.0%
AAACAATCCTCCATCAGAGA+AGG + chr1_2:15080913-15080932 Msa0058600:CDS 40.0%
AACAATCCTCCATCAGAGAA+GGG + chr1_2:15080914-15080933 Msa0058600:CDS 40.0%
!! ATTTCAAGAGCATTCTTGCC+TGG + chr1_2:15080982-15081001 Msa0058600:CDS 40.0%
AACATACGATATACCCAACC+AGG - chr1_2:15081003-15081022 None:intergenic 40.0%
ACTCCTATTTGCTTGCACAA+AGG + chr1_2:15081025-15081044 Msa0058600:CDS 40.0%
CTCCTATTTGCTTGCACAAA+GGG + chr1_2:15081026-15081045 Msa0058600:CDS 40.0%
CTGTTGCAAATGATATGGCT+TGG + chr1_2:15081438-15081457 Msa0058600:intron 40.0%
AAGCACTAAAAAGGGCAATC+TGG - chr1_2:15081536-15081555 None:intergenic 40.0%
!! GATTGCCCTTTTTAGTGCTT+TGG + chr1_2:15081536-15081555 Msa0058600:intron 40.0%
AGCACCCAGAGTTTAAAGAA+AGG + chr1_2:15081734-15081753 Msa0058600:intron 40.0%
GGTTGCCTTTCTTTAAACTC+TGG - chr1_2:15081742-15081761 None:intergenic 40.0%
TAGATAAATCGGAATGCGCT+CGG - chr1_2:15081764-15081783 None:intergenic 40.0%
AACTGTCTAAACCCGAAGAA+AGG - chr1_2:15081917-15081936 None:intergenic 40.0%
ATGTGACATGATCCTTCAAG+GGG + chr1_2:15082083-15082102 Msa0058600:intron 40.0%
TGACAATTATTATGGGTCCG+AGG + chr1_2:15082313-15082332 Msa0058600:intron 40.0%
GACAATTATTATGGGTCCGA+GGG + chr1_2:15082314-15082333 Msa0058600:intron 40.0%
AACTAAGGTAATACTCCCTC+CGG + chr1_2:15082355-15082374 Msa0058600:intron 40.0%
TGCTTATAAATGTGACCGGA+GGG - chr1_2:15082490-15082509 None:intergenic 40.0%
TTGCTTATAAATGTGACCGG+AGG - chr1_2:15082489-15082508 None:intergenic 40.0%
TTGCTTATAAATGTGACCGG+AGG + chr1_2:15082489-15082508 Msa0058600:intron 40.0%
TGCTTATAAATGTGACCGGA+GGG + chr1_2:15082490-15082509 Msa0058600:intron 40.0%
GATATGTGGAAGCAAATCGT+TGG + chr1_2:15082616-15082635 Msa0058600:intron 40.0%
!! TTAACAAGAGCATCCATGCT+TGG - chr1_2:15082646-15082665 None:intergenic 40.0%
TGCCTTGTAGATTCAGAAAC+AGG - chr1_2:15082709-15082728 None:intergenic 40.0%
! TGTTTCTGAATCTACAAGGC+AGG + chr1_2:15082708-15082727 Msa0058600:CDS 40.0%
!! AGGAGCTTTTGGAGATTGAT+GGG + chr1_2:15082728-15082747 Msa0058600:CDS 40.0%
GGATCTCATATAGATTGCGT+AGG + chr1_2:15082749-15082768 Msa0058600:CDS 40.0%
TATCCGCACTTGATGAAAGT+TGG - chr1_2:15083005-15083024 None:intergenic 40.0%
CATTTACATACGCACCAACA+GGG - chr1_2:15083110-15083129 None:intergenic 40.0%
ACGACTTTGTACAAGGCAAA+TGG + chr1_2:15083153-15083172 Msa0058600:CDS 40.0%
!! GCAAATGGATTAGCTCTAAC+TGG + chr1_2:15083168-15083187 Msa0058600:CDS 40.0%
! TGTCTGCCCATTTTCATTTC+TGG + chr1_2:15083229-15083248 Msa0058600:intron 40.0%
GCATCCACCAGAAATGAAAA+TGG - chr1_2:15083239-15083258 None:intergenic 40.0%
! TGGTAGTGATAACATGGCAA+TGG - chr1_2:15083302-15083321 None:intergenic 40.0%
! GGTTCAACTTAATTCTGAGG+TGG - chr1_2:15083561-15083580 None:intergenic 40.0%
GAAGGACTGTGCATAATAAG+AGG - chr1_2:15083605-15083624 None:intergenic 40.0%
!! GAGCTTTGGAGTTTGTATGA+AGG - chr1_2:15083623-15083642 None:intergenic 40.0%
TGTAAAAAGCCACCCCATAT+GGG - chr1_2:15083826-15083845 None:intergenic 40.0%
CGTATACCCCAAAATGACTT+AGG - chr1_2:15083870-15083889 None:intergenic 40.0%
! TCTTAGATTTTGCCATCGTC+TGG - chr1_2:15084051-15084070 None:intergenic 40.0%
GACTAGATTGGGTTTATCCA+TGG + chr1_2:15084155-15084174 Msa0058600:three_prime_UTR 40.0%
! GAGGTGTTATATTTGGGTGT+TGG + chr1_2:15084185-15084204 Msa0058600:three_prime_UTR 40.0%
! GCTGGAGAATTTGCTCGATT+TGG - chr1_2:15077081-15077100 None:intergenic 45.0%
TGTCATCATCGGAAGAATCG+TGG - chr1_2:15077144-15077163 None:intergenic 45.0%
! TGCATGTTTGGCTCCACTAT+GGG + chr1_2:15077368-15077387 Msa0058600:intron 45.0%
!!! AATTTTGGCTCCTCCCATAG+TGG - chr1_2:15077384-15077403 None:intergenic 45.0%
ACCGCCCAGATATGTATGTA+AGG - chr1_2:15078437-15078456 None:intergenic 45.0%
!! CACAGGTCAACGTTTTTGGA+TGG + chr1_2:15078578-15078597 Msa0058600:CDS 45.0%
!! AGGTCAACGTTTTTGGATGG+TGG + chr1_2:15078581-15078600 Msa0058600:CDS 45.0%
!! GGTCAACGTTTTTGGATGGT+GGG + chr1_2:15078582-15078601 Msa0058600:CDS 45.0%
GGTATCTGTGTCATCCTTCA+TGG + chr1_2:15078638-15078657 Msa0058600:intron 45.0%
!! TCCCCAGGCCTATTTCTTTT+AGG + chr1_2:15078969-15078988 Msa0058600:intron 45.0%
CTCAACAGCAGCCACAAAAT+TGG - chr1_2:15079323-15079342 None:intergenic 45.0%
GTTGACGTTCCTTACACCAT+TGG + chr1_2:15079358-15079377 Msa0058600:CDS 45.0%
! GATCTGGAAAGAGCATGTAC+AGG - chr1_2:15079476-15079495 None:intergenic 45.0%
TATCGCTGAAAACTCGGATC+TGG - chr1_2:15079492-15079511 None:intergenic 45.0%
TTGCGGTATCGCTGAAAACT+CGG - chr1_2:15079498-15079517 None:intergenic 45.0%
AGGATGAAAACCGCAAGCAT+TGG + chr1_2:15079523-15079542 Msa0058600:CDS 45.0%
GGATGAAAACCGCAAGCATT+GGG + chr1_2:15079524-15079543 Msa0058600:CDS 45.0%
! CAAACACCAACGACTTTTCG+AGG - chr1_2:15079626-15079645 None:intergenic 45.0%
CATTCAACGAACCATCCTCT+AGG - chr1_2:15080214-15080233 None:intergenic 45.0%
AGAGGATGGTTCGTTGAATG+TGG + chr1_2:15080214-15080233 Msa0058600:CDS 45.0%
! AGCAATGGTGTTAAGGTGTC+TGG - chr1_2:15080829-15080848 None:intergenic 45.0%
! GTCAGGTAGCAATGGTGTTA+AGG - chr1_2:15080836-15080855 None:intergenic 45.0%
! GGAGGATTGTTTTCCAGAAG+AGG - chr1_2:15080905-15080924 None:intergenic 45.0%
ATTAAGCCCTTCTCTGATGG+AGG - chr1_2:15080923-15080942 None:intergenic 45.0%
CCAATTAAGCCCTTCTCTGA+TGG - chr1_2:15080926-15080945 None:intergenic 45.0%
CCATCAGAGAAGGGCTTAAT+TGG + chr1_2:15080923-15080942 Msa0058600:CDS 45.0%
!! AAGAGCATTCTTGCCTGGTT+GGG + chr1_2:15080987-15081006 Msa0058600:CDS 45.0%
AGCCCTTTGTGCAAGCAAAT+AGG - chr1_2:15081031-15081050 None:intergenic 45.0%
GCAATGTGCGCAACATTTGA+GGG - chr1_2:15081183-15081202 None:intergenic 45.0%
! TGATCAGAGCTTTCGAGTGT+AGG + chr1_2:15081213-15081232 Msa0058600:intron 45.0%
GGTACAATAAATGGGAGCCT+TGG + chr1_2:15081356-15081375 Msa0058600:intron 45.0%
AAATGGGAGCCTTGGTACAA+TGG + chr1_2:15081364-15081383 Msa0058600:intron 45.0%
! TGATATGGCTTGGCTACAGT+AGG + chr1_2:15081448-15081467 Msa0058600:intron 45.0%
GGCTACAGTAGGTCTATAAC+AGG + chr1_2:15081459-15081478 Msa0058600:intron 45.0%
!! AACTCTGGGTGCTATTGTGA+TGG - chr1_2:15081727-15081746 None:intergenic 45.0%
AGATAAATCGGAATGCGCTC+GGG - chr1_2:15081763-15081782 None:intergenic 45.0%
GGGCATAGAGACTAAACACA+TGG - chr1_2:15081941-15081960 None:intergenic 45.0%
TGTGACATGATCCTTCAAGG+GGG + chr1_2:15082084-15082103 Msa0058600:intron 45.0%
!!! GGTCCGAGGGAGTATTTTTT+AGG + chr1_2:15082327-15082346 Msa0058600:intron 45.0%
!! TTCTTCTGAAGTACTCCCTC+CGG - chr1_2:15082508-15082527 None:intergenic 45.0%
! ATCTACAAGGCAGGAGCTTT+TGG + chr1_2:15082717-15082736 Msa0058600:CDS 45.0%
!! CAGGAGCTTTTGGAGATTGA+TGG + chr1_2:15082727-15082746 Msa0058600:CDS 45.0%
!! GATTGGTGACGATGATTACC+TGG - chr1_2:15082822-15082841 None:intergenic 45.0%
! ATGCTGGTGATGTCTAGTGA+AGG + chr1_2:15083084-15083103 Msa0058600:CDS 45.0%
GCATTTACATACGCACCAAC+AGG - chr1_2:15083111-15083130 None:intergenic 45.0%
GGTGCGTATGTAAATGCAAC+TGG + chr1_2:15083114-15083133 Msa0058600:CDS 45.0%
!! CTGCCCATTTTCATTTCTGG+TGG + chr1_2:15083232-15083251 Msa0058600:intron 45.0%
AAGCAGTGGTACACATGTCA+TGG - chr1_2:15083423-15083442 None:intergenic 45.0%
CCATGTGTACAATGAAGCAG+TGG - chr1_2:15083437-15083456 None:intergenic 45.0%
CCACTGCTTCATTGTACACA+TGG + chr1_2:15083434-15083453 Msa0058600:intron 45.0%
TCTCTCAACTATCACCTTCG+AGG + chr1_2:15083702-15083721 Msa0058600:intron 45.0%
ACAGCATAGAAGATCCTCGA+AGG - chr1_2:15083719-15083738 None:intergenic 45.0%
TTACTTCTGGCAGGTATGCA+TGG + chr1_2:15083772-15083791 Msa0058600:intron 45.0%
TGCCACATGTGAAACCCATA+TGG + chr1_2:15083809-15083828 Msa0058600:CDS 45.0%
GCCACATGTGAAACCCATAT+GGG + chr1_2:15083810-15083829 Msa0058600:CDS 45.0%
CCACATGTGAAACCCATATG+GGG + chr1_2:15083811-15083830 Msa0058600:CDS 45.0%
CTGTAAAAAGCCACCCCATA+TGG - chr1_2:15083827-15083846 None:intergenic 45.0%
!!! TCTTTTTAATAAATAATTTT+TGG + chr1_2:15081982-15082001 Msa0058600:intron 5.0%
GCAATTCTTCGAGATCGAGC+TGG - chr1_2:15077099-15077118 None:intergenic 50.0%
! GTGCATGTTTGGCTCCACTA+TGG + chr1_2:15077367-15077386 Msa0058600:intron 50.0%
! ATGTTTGGCTCCACTATGGG+AGG + chr1_2:15077371-15077390 Msa0058600:intron 50.0%
!! GGCAAAAGCACCCAAGAATG+TGG - chr1_2:15079068-15079087 None:intergenic 50.0%
TCAGGAGTTGTGCTCTTTCC+TGG + chr1_2:15079268-15079287 Msa0058600:intron 50.0%
CAGGAGTTGTGCTCTTTCCT+GGG + chr1_2:15079269-15079288 Msa0058600:intron 50.0%
AGGAGTTGTGCTCTTTCCTG+GGG + chr1_2:15079270-15079289 Msa0058600:intron 50.0%
GGATTTACCTACCACGCCAA+TGG - chr1_2:15079377-15079396 None:intergenic 50.0%
TCAGCGATACCGCAAATCGT+AGG + chr1_2:15079503-15079522 Msa0058600:CDS 50.0%
CAAAACCTGTCTGAGGAGCT+GGG + chr1_2:15079998-15080017 Msa0058600:intron 50.0%
TCGTTGAATGTGGTCACTCG+TGG + chr1_2:15080224-15080243 Msa0058600:CDS 50.0%
GCTTTCGCTTAAGACGGTGT+TGG + chr1_2:15080255-15080274 Msa0058600:CDS 50.0%
! AAGACGGTGTTGGATCGATG+TGG + chr1_2:15080265-15080284 Msa0058600:CDS 50.0%
TTGGATCGATGTGGAAGGAG+TGG + chr1_2:15080274-15080293 Msa0058600:CDS 50.0%
ACATACCATCGCGAACTCCA+AGG + chr1_2:15080536-15080555 Msa0058600:CDS 50.0%
CATACCATCGCGAACTCCAA+GGG + chr1_2:15080537-15080556 Msa0058600:CDS 50.0%
! CGAACTCCAAGGGATGCTTT+TGG + chr1_2:15080547-15080566 Msa0058600:CDS 50.0%
TTGAAGGCAACACACTGGCA+CGG - chr1_2:15080606-15080625 None:intergenic 50.0%
TGGACAGGACTCCTTAAACG+AGG + chr1_2:15080639-15080658 Msa0058600:CDS 50.0%
ATAGGGAGCTGTTCCTCTTC+TGG + chr1_2:15080889-15080908 Msa0058600:CDS 50.0%
!! CAAGAGCATTCTTGCCTGGT+TGG + chr1_2:15080986-15081005 Msa0058600:CDS 50.0%
GGCAATGTGCGCAACATTTG+AGG - chr1_2:15081184-15081203 None:intergenic 50.0%
GGAGCCTTGGTACAATGGTT+GGG + chr1_2:15081369-15081388 Msa0058600:intron 50.0%
GAGCCTTGGTACAATGGTTG+GGG + chr1_2:15081370-15081389 Msa0058600:intron 50.0%
CAACCCCAACCATTGTACCA+AGG - chr1_2:15081376-15081395 None:intergenic 50.0%
GGGGTTGTTGCTATGTGACA+AGG + chr1_2:15081389-15081408 Msa0058600:intron 50.0%
TGATGCCAACGCGAAGCTTA+GGG - chr1_2:15081495-15081514 None:intergenic 50.0%
!! ATCTGGTGCCATGAAGCTCT+TGG - chr1_2:15081519-15081538 None:intergenic 50.0%
GTGACATGATCCTTCAAGGG+GGG + chr1_2:15082085-15082104 Msa0058600:intron 50.0%
TATTGACACTCCCCCCTTGA+AGG - chr1_2:15082098-15082117 None:intergenic 50.0%
AATCGTTGGTGCACCAAGCA+TGG + chr1_2:15082630-15082649 Msa0058600:CDS 50.0%
TGCAAAGCGGAGTGATATGC+TGG + chr1_2:15083068-15083087 Msa0058600:CDS 50.0%
ATGTCTAGTGAAGGCCCTGT+TGG + chr1_2:15083093-15083112 Msa0058600:CDS 50.0%
AAATGGGCAGACACTTACCC+CGG - chr1_2:15083222-15083241 None:intergenic 50.0%
! AAATGGGAAGTGCAGCTGGA+TGG - chr1_2:15083511-15083530 None:intergenic 50.0%
! GGAAAAATGGGAAGTGCAGC+TGG - chr1_2:15083515-15083534 None:intergenic 50.0%
CCCCATATGGGTTTCACATG+TGG - chr1_2:15083814-15083833 None:intergenic 50.0%
CATGTGAAACCCATATGGGG+TGG + chr1_2:15083814-15083833 Msa0058600:CDS 50.0%
CGTTCCTTACACCATTGGCG+TGG + chr1_2:15079363-15079382 Msa0058600:CDS 55.0%
CCTACCACGCCAATGGTGTA+AGG - chr1_2:15079370-15079389 None:intergenic 55.0%
CCTTACACCATTGGCGTGGT+AGG + chr1_2:15079367-15079386 Msa0058600:intron 55.0%
TGCAGTCGTCCCAATGCTTG+CGG - chr1_2:15079536-15079555 None:intergenic 55.0%
!! AAGCATTGGGACGACTGCAG+AGG + chr1_2:15079537-15079556 Msa0058600:CDS 55.0%
GCAAAACCTGTCTGAGGAGC+TGG + chr1_2:15079997-15080016 Msa0058600:intron 55.0%
! CGGTGTTGGATCGATGTGGA+AGG + chr1_2:15080269-15080288 Msa0058600:CDS 55.0%
AACACACTGGCACGGTTGCA+AGG - chr1_2:15080598-15080617 None:intergenic 55.0%
TTGCTTGCACAAAGGGCTGC+AGG + chr1_2:15081033-15081052 Msa0058600:CDS 55.0%
TGCGCAACATTTGAGGGCTG+AGG - chr1_2:15081177-15081196 None:intergenic 55.0%
GGGAGCCTTGGTACAATGGT+TGG + chr1_2:15081368-15081387 Msa0058600:intron 55.0%
CCAACGCGAAGCTTAGGGAA+GGG - chr1_2:15081490-15081509 None:intergenic 55.0%
CTGATGCCAACGCGAAGCTT+AGG - chr1_2:15081496-15081515 None:intergenic 55.0%
GGCATCAGCCAAGAGCTTCA+TGG + chr1_2:15081508-15081527 Msa0058600:intron 55.0%
AGTCCTGGTTATGGCACCGC+AGG + chr1_2:15078370-15078389 Msa0058600:intron 60.0%
CTCAAGGGAAGAGTAGCCCC+AGG - chr1_2:15079289-15079308 None:intergenic 60.0%
CACATCCCAGCTCCTCAGAC+AGG - chr1_2:15080006-15080025 None:intergenic 60.0%
GCATCCCTTGGAGTTCGCGA+TGG - chr1_2:15080544-15080563 None:intergenic 60.0%
CCCTTCCCTAAGCTTCGCGT+TGG + chr1_2:15081487-15081506 Msa0058600:intron 60.0%
GCCAACGCGAAGCTTAGGGA+AGG - chr1_2:15081491-15081510 None:intergenic 60.0%
!! ACGCCTGCGGTGCCATAACC+AGG - chr1_2:15078376-15078395 None:intergenic 65.0%
TCGACAGTACGGGCGCCTAG+AGG + chr1_2:15080196-15080215 Msa0058600:CDS 65.0%
CAGTACGGGCGCCTAGAGGA+TGG + chr1_2:15080200-15080219 Msa0058600:CDS 65.0%
TTCACCCGGGACGACGCCTG+CGG - chr1_2:15078389-15078408 None:intergenic 70.0%
! TGGCACCGCAGGCGTCGTCC+CGG + chr1_2:15078381-15078400 Msa0058600:CDS 75.0%
!! GGCACCGCAGGCGTCGTCCC+GGG + chr1_2:15078382-15078401 Msa0058600:CDS 80.0%
Chromosome Type Strat End Strand Name
chr1_2 gene 15076910 15084260 15076910 ID=Msa0058600;Name=Msa0058600
chr1_2 mRNA 15076910 15084260 15076910 ID=Msa0058600-mRNA-1;Parent=Msa0058600;Name=Msa0058600-mRNA-1;_AED=0.12;_eAED=0.12;_QI=109|1|1|1|0.9|0.81|11|281|556
chr1_2 exon 15076910 15077191 15076910 ID=Msa0058600-mRNA-1:exon:6063;Parent=Msa0058600-mRNA-1
chr1_2 exon 15078372 15078454 15078372 ID=Msa0058600-mRNA-1:exon:6064;Parent=Msa0058600-mRNA-1
chr1_2 exon 15078561 15078638 15078561 ID=Msa0058600-mRNA-1:exon:6065;Parent=Msa0058600-mRNA-1
chr1_2 exon 15079272 15079384 15079272 ID=Msa0058600-mRNA-1:exon:6066;Parent=Msa0058600-mRNA-1
chr1_2 exon 15079493 15079558 15079493 ID=Msa0058600-mRNA-1:exon:6067;Parent=Msa0058600-mRNA-1
chr1_2 exon 15080194 15080295 15080194 ID=Msa0058600-mRNA-1:exon:6068;Parent=Msa0058600-mRNA-1
chr1_2 exon 15080505 15081054 15080505 ID=Msa0058600-mRNA-1:exon:6069;Parent=Msa0058600-mRNA-1
chr1_2 exon 15082617 15082822 15082617 ID=Msa0058600-mRNA-1:exon:6070;Parent=Msa0058600-mRNA-1
chr1_2 exon 15083060 15083223 15083060 ID=Msa0058600-mRNA-1:exon:6071;Parent=Msa0058600-mRNA-1
chr1_2 exon 15083785 15084081 15083785 ID=Msa0058600-mRNA-1:exon:6072;Parent=Msa0058600-mRNA-1
chr1_2 exon 15084141 15084260 15084141 ID=Msa0058600-mRNA-1:exon:6073;Parent=Msa0058600-mRNA-1
chr1_2 five_prime_UTR 15076910 15077018 15076910 ID=Msa0058600-mRNA-1:five_prime_utr;Parent=Msa0058600-mRNA-1
chr1_2 CDS 15077019 15077191 15077019 ID=Msa0058600-mRNA-1:cds;Parent=Msa0058600-mRNA-1
chr1_2 CDS 15078372 15078454 15078372 ID=Msa0058600-mRNA-1:cds;Parent=Msa0058600-mRNA-1
chr1_2 CDS 15078561 15078638 15078561 ID=Msa0058600-mRNA-1:cds;Parent=Msa0058600-mRNA-1
chr1_2 CDS 15079272 15079384 15079272 ID=Msa0058600-mRNA-1:cds;Parent=Msa0058600-mRNA-1
chr1_2 CDS 15079493 15079558 15079493 ID=Msa0058600-mRNA-1:cds;Parent=Msa0058600-mRNA-1
chr1_2 CDS 15080194 15080295 15080194 ID=Msa0058600-mRNA-1:cds;Parent=Msa0058600-mRNA-1
chr1_2 CDS 15080505 15081054 15080505 ID=Msa0058600-mRNA-1:cds;Parent=Msa0058600-mRNA-1
chr1_2 CDS 15082617 15082822 15082617 ID=Msa0058600-mRNA-1:cds;Parent=Msa0058600-mRNA-1
chr1_2 CDS 15083060 15083223 15083060 ID=Msa0058600-mRNA-1:cds;Parent=Msa0058600-mRNA-1
chr1_2 CDS 15083785 15083920 15083785 ID=Msa0058600-mRNA-1:cds;Parent=Msa0058600-mRNA-1
chr1_2 three_prime_UTR 15083921 15084081 15083921 ID=Msa0058600-mRNA-1:three_prime_utr;Parent=Msa0058600-mRNA-1
chr1_2 three_prime_UTR 15084141 15084260 15084141 ID=Msa0058600-mRNA-1:three_prime_utr;Parent=Msa0058600-mRNA-1
Gene Sequence

>Msa0058600

ATGGAAGAAGAAGACAACAACAGAAGAAGAATGCTTGAGAGAGAACGATACGAACGATACCAAATCGAGCAAATTCTCCAGCTCGATCTCGAAGAATTGCAAGTAGAAGAAGTCGACGTTTTCCACGATTCTTCCGATGATGACAACAACAACAACAATCACGCTGATCCTATTCCTGGTTATGGCACCGCAGGCGTCGTCCCGGGTGAATTCACTTACAATACTTGTATAGCATCCTTACATACATATCTGGGCGATGTTGAAGACACACATCACAGGTCAACGTTTTTGGATGGTGGGACTGTATTGACCCTTCCGATTTTTTGTCTTGAAGGAGTTGTGCTCTTTCCTGGGGCTACTCTTCCCTTGAGAGTTATTGAATCCAATTTTGTGGCTGCTGTTGAGAAATCTTTGAGTCGAGTTGACGTTCCTTACACCATTGGCGTGATCCGAGTTTTCAGCGATACCGCAAATCGTAGGATGAAAACCGCAAGCATTGGGACGACTGCAGAGATTCGACAGTACGGGCGCCTAGAGGATGGTTCGTTGAATGTGGTCACTCGTGGACAACAACGCTTTCGCTTAAGACGGTGTTGGATCGATGTGGAAGGAGTGCCTTATGGAGAGATCCAAATTATTGAGGAAAACATACCATCGCGAACTCCAAGGGATGCTTTTGGAAAATTAACACCCTTAAGTAATCTTCCTTGCAACCGTGCCAGTGTGTTGCCTTCAAAGTATTCTGTTGATGGACAGGACTCCTTAAACGAGGAAAGTGAAACAGAAGAGAGCTTTGAGAATGAACTTTCATCTACAGAGAGAAGAATCCATCAATCACTCATTCGTTCCAGTTTTGAATATGATGAATCAGCAAGTAGTGGTGATGATAAATTCACATATGAGTCAGATCAGGAAATTAGATCCAATCTAAATACACCAGACACCTTAACACCATTGCTACCTGACCATGAAAAAGATGCAGAAAATCTGGATTCTAGAATAGGGAGCTGTTCCTCTTCTGGAAAACAATCCTCCATCAGAGAAGGGCTTAATTGGTGTTCTAAAAATAGAGACCCCTACTCCTCACATAGAATTTCAAGAGCATTCTTGCCTGGTTGGGTATATCGTATGTTTGACTCCTATTTGCTTGCACAAAGGGCTGCAGATATGTGGAAGCAAATCGTTGGTGCACCAAGCATGGATGCTCTTGTTAAGAAGCCTGATGTTTTATCATTTTCTATTGCCAGTAAAATACCTGTTTCTGAATCTACAAGGCAGGAGCTTTTGGAGATTGATGGGATCTCATATAGATTGCGTAGGGAAATTGAATTACTAGAAAGCATTGATCTAATTCGATGTAAAATCTGCCAGATTATAATTGCAAAGCGGAGTGATATGCTGGTGATGTCTAGTGAAGGCCCTGTTGGTGCGTATGTAAATGCAACTGGTTATGTGCATGAGATAACGACTTTGTACAAGGCAAATGGATTAGCTCTAACTGGGCCAGCACTTACAAAATATAGTTGGTTTCCGGGGTATGCATGGACAATTGCTAACTGTGCCACATGTGAAACCCATATGGGGTGGCTTTTTACAGCCACAAACAGAAAACTGAAACCTAAGTCATTTTGGGGTATACGTAACTGTCAAGTTGCAGACGAAACACACTAA

Protein sequence

>Msa0058600

MEEEDNNRRRMLERERYERYQIEQILQLDLEELQVEEVDVFHDSSDDDNNNNNHADPIPGYGTAGVVPGEFTYNTCIASLHTYLGDVEDTHHRSTFLDGGTVLTLPIFCLEGVVLFPGATLPLRVIESNFVAAVEKSLSRVDVPYTIGVIRVFSDTANRRMKTASIGTTAEIRQYGRLEDGSLNVVTRGQQRFRLRRCWIDVEGVPYGEIQIIEENIPSRTPRDAFGKLTPLSNLPCNRASVLPSKYSVDGQDSLNEESETEESFENELSSTERRIHQSLIRSSFEYDESASSGDDKFTYESDQEIRSNLNTPDTLTPLLPDHEKDAENLDSRIGSCSSSGKQSSIREGLNWCSKNRDPYSSHRISRAFLPGWVYRMFDSYLLAQRAADMWKQIVGAPSMDALVKKPDVLSFSIASKIPVSESTRQELLEIDGISYRLRREIELLESIDLIRCKICQIIIAKRSDMLVMSSEGPVGAYVNATGYVHEITTLYKANGLALTGPALTKYSWFPGYAWTIANCATCETHMGWLFTATNRKLKPKSFWGIRNCQVADETH*