AlfalfaGEDB Alfalfa Gene Editing Database

M. sativa cultivar zhongmu-4 / Msa0148000

Query id Subject id identity % alignment length mismatches gap openings q. start q. end s. start s. end e-value bit score
Msa0148000 MtrunA17_Chr1g0150941 98.107 317 6 0 1 317 1 317 0.0 642
Msa0148000 MtrunA17_Chr1g0150941 98.007 301 6 0 318 618 209 509 0.0 632
Msa0148000 MtrunA17_Chr7g0257061 47.682 302 134 8 18 306 49 339 9.36e-83 270
Msa0148000 MtrunA17_Chr7g0257061 41.254 303 162 6 318 614 246 538 2.46e-77 255
Msa0148000 MtrunA17_Chr3g0141981 45.333 300 151 6 318 612 231 522 5.04e-82 268
Msa0148000 MtrunA17_Chr3g0141981 48.929 280 130 8 37 308 57 331 5.75e-70 236
Msa0148000 MtrunA17_Chr4g0020621 43.234 303 156 5 318 614 231 523 1.00e-81 266
Msa0148000 MtrunA17_Chr4g0020621 47.122 278 129 5 37 306 57 324 4.56e-79 259
Msa0148000 MtrunA17_Chr3g0091141 44.079 304 150 6 318 615 254 543 5.16e-81 265
Msa0148000 MtrunA17_Chr3g0091141 45.231 325 156 8 37 353 81 391 1.12e-80 265
Msa0148000 MtrunA17_Chr2g0299371 41.883 308 159 10 318 615 243 540 2.26e-73 245
Msa0148000 MtrunA17_Chr2g0299371 43.686 293 138 7 36 306 53 340 2.20e-66 226
Msa0148000 MtrunA17_Chr4g0071111 37.954 303 171 8 318 614 236 527 4.65e-68 230
Msa0148000 MtrunA17_Chr4g0071111 37.853 354 188 10 17 353 37 375 3.40e-67 228
Msa0148000 MtrunA17_Chr4g0071121 40.729 329 172 10 35 353 52 367 7.06e-64 219
Msa0148000 MtrunA17_Chr4g0071121 39.216 306 161 10 318 613 228 518 1.07e-59 207
Msa0148000 MtrunA17_Chr2g0299361 38.111 307 155 8 315 613 32 311 7.02e-57 194
Msa0148000 MtrunA17_Chr2g0299361 28.889 180 96 5 183 356 9 162 1.33e-11 66.2
Msa0148000 MtrunA17_Chr2g0299351 36.453 203 104 5 1 187 16 209 7.85e-29 115
Query id Subject id identity % alignment length mismatches gap openings q. start q. end s. start s. end e-value bit score
Msa0148000 AT5G21482.1 58.204 323 134 1 294 615 201 523 2.12e-138 414
Msa0148000 AT5G21482.1 59.940 332 117 4 1 316 1 332 3.48e-128 387
Msa0148000 AT2G41510.3 44.571 350 169 9 16 353 50 386 3.02e-82 266
Msa0148000 AT2G41510.3 41.709 199 107 4 318 514 249 440 1.82e-43 162
Msa0148000 AT2G41510.1 45.483 321 159 7 38 353 77 386 1.01e-80 266
Msa0148000 AT2G41510.1 42.000 300 164 5 318 614 249 541 2.93e-77 256
Msa0148000 AT2G41510.2 45.483 321 159 7 38 353 139 448 1.86e-80 266
Msa0148000 AT2G41510.2 42.000 300 164 5 318 614 311 603 1.04e-76 256
Msa0148000 AT1G75450.2 44.884 303 155 6 315 612 222 517 9.77e-80 262
Msa0148000 AT1G75450.2 48.966 290 133 11 29 309 40 323 8.42e-72 241
Msa0148000 AT1G75450.1 44.884 303 155 6 315 612 225 520 1.02e-79 262
Msa0148000 AT1G75450.1 49.135 289 133 10 29 309 44 326 1.44e-73 246
Msa0148000 AT3G63440.1 47.687 281 129 6 37 308 60 331 2.77e-78 258
Msa0148000 AT3G63440.1 41.176 306 165 5 315 614 232 528 2.52e-75 250
Msa0148000 AT5G56970.1 39.465 299 170 5 318 614 230 519 3.98e-68 231
Msa0148000 AT5G56970.1 42.391 276 153 4 37 311 58 328 9.72e-64 219
Msa0148000 AT5G56970.2 42.391 276 153 4 37 311 58 328 9.13e-65 219
Msa0148000 AT5G56970.2 40.704 199 111 4 318 514 230 423 7.11e-40 151
Msa0148000 AT2G19500.1 45.923 233 120 3 35 266 43 270 2.59e-62 214
Msa0148000 AT2G19500.1 39.000 300 167 8 318 612 213 501 1.12e-59 207
Msa0148000 AT4G29740.3 44.490 245 122 3 35 266 50 293 6.70e-62 210
Msa0148000 AT4G29740.1 38.253 332 183 7 35 353 50 372 4.01e-61 209
Msa0148000 AT4G29740.1 35.678 199 120 5 318 514 236 428 5.54e-29 120
Msa0148000 AT4G29740.2 38.253 332 183 7 35 353 50 372 3.13e-60 209
Msa0148000 AT4G29740.2 37.584 298 175 6 318 613 236 524 3.74e-59 207

Find 208 sgRNAs with CRISPR-Local

Find 576 sgRNAs with CRISPR-GE


CRISPR-Local

CRISPR-Local
sgRNA_sequence on_target_score Position Region
ATATTATTTAAGTTGGTTTC+TGG 0.147486 1_4:-8184782 None:intergenic
GACAAACCGGGTTGAAAATT+TGG 0.149145 1_4:-8178709 None:intergenic
GACAAACCGGGTTGAAAATT+TGG 0.149145 1_4:-8180340 None:intergenic
TCTTTACTAGCGATGGAATT+AGG 0.152257 1_4:-8177768 None:intergenic
CGCCATGGCTTGGCCGTTGA+TGG 0.241138 1_4:-8177922 None:intergenic
ATAATTTGAATTACCATATC+AGG 0.263814 1_4:-8178338 None:intergenic
ATAATTTGAATTACCATATC+AGG 0.263814 1_4:-8179969 None:intergenic
ACGTTTCCGGTGGGGCATTA+TGG 0.267117 1_4:+8178027 Msa0148000:CDS
TGCGACACTTTGGGGATAAA+TGG 0.271384 1_4:+8184689 Msa0148000:CDS
TTTGCTTCACTTGGTGGTCT+TGG 0.275872 1_4:+8178269 Msa0148000:CDS
CTTTACTAGCGATGGAATTA+GGG 0.278545 1_4:-8177767 None:intergenic
GTTCCACACGTCGACGTTTC+CGG 0.291921 1_4:+8178014 Msa0148000:CDS
ATGCTAAAGCCAAAGGTATA+TGG 0.292797 1_4:+8181803 Msa0148000:CDS
GGTAAGCTATCATGTTTGTT+TGG 0.300397 1_4:-8177662 None:intergenic
TACCTTGAACACTTCGTTCA+TGG 0.302711 1_4:+8177681 Msa0148000:CDS
AGCTTGTTGAAGAACGATTC+TGG 0.307035 1_4:-8178315 None:intergenic
AGCTTGTTGAAGAACGATTC+TGG 0.307035 1_4:-8179946 None:intergenic
GGGACCACCTACTGATAAAT+TGG 0.310615 1_4:+8184573 Msa0148000:CDS
TGATGAACCATTGTAGTAAT+TGG 0.325750 1_4:-8184914 None:intergenic
ACCACATCGGCGGTGGTGTA+AGG 0.326905 1_4:-8177834 None:intergenic
AACGGCAAACGTAACGGAAT+TGG 0.333855 1_4:+8178184 Msa0148000:CDS
AGAATTGGATGCGACACTTT+GGG 0.334189 1_4:+8184680 Msa0148000:CDS
CGTTTCCGGTGGGGCATTAT+GGG 0.338199 1_4:+8178028 Msa0148000:CDS
CTAATTAATATTATTTAAGT+TGG 0.346858 1_4:-8184789 None:intergenic
GTTTGTCTTCCTTCTTCAGC+TGG 0.347023 1_4:+8178725 Msa0148000:CDS
GTTTGTCTTCCTTCTTCAGC+TGG 0.347023 1_4:+8180356 Msa0148000:CDS
GCGGAGTACGGCGAGGGGAG+TGG 0.353548 1_4:-8177811 None:intergenic
TCCGTTACGTTTGCCGTTTG+AGG 0.363428 1_4:-8178179 None:intergenic
CTTGGTGGTCTTGGTCAGTT+TGG 0.364537 1_4:+8178278 Msa0148000:CDS
AACCATTGTAGTAATTGGTT+GGG 0.364988 1_4:-8184909 None:intergenic
GTAAGCTATCATGTTTGTTT+GGG 0.372447 1_4:-8177661 None:intergenic
TAATCAAAACCGTCACCTTC+TGG 0.374704 1_4:-8178614 None:intergenic
TAATCAAAACCGTCACCTTC+TGG 0.374704 1_4:-8180245 None:intergenic
ACGGAATTGGAAGTTGTTAC+TGG 0.376042 1_4:+8178197 Msa0148000:CDS
TCTTCAACAAGCTCCTGATA+TGG 0.379699 1_4:+8178325 Msa0148000:CDS
TCTTCAACAAGCTCCTGATA+TGG 0.379699 1_4:+8179956 Msa0148000:CDS
CCATTGGCTATTCTTGCACC+TGG 0.390881 1_4:+8184745 Msa0148000:CDS
AAAATCAGCAATGTCGGTCT+TGG 0.394703 1_4:-8181860 None:intergenic
ACTACACGTCTCAGGAGAAT+TGG 0.396585 1_4:+8184665 Msa0148000:CDS
CGCCGCCACTGTTAAATTTG+TGG 0.405726 1_4:-8177883 None:intergenic
GTCCTTTCTCCGCCATGGCT+TGG 0.407600 1_4:-8177932 None:intergenic
AAGTGGATAGATTGCTTGGA+GGG 0.409011 1_4:+8181698 Msa0148000:CDS
ACTTACTTGCTTCGCAATAG+TGG 0.415161 1_4:-8181943 None:intergenic
AGGTCGTGGACGGATTATCT+TGG 0.416052 1_4:+8178095 Msa0148000:CDS
GAGAATTGGATGCGACACTT+TGG 0.419306 1_4:+8184679 Msa0148000:CDS
AGAGATGAAACGTCGTCGTT+TGG 0.424313 1_4:-8177723 None:intergenic
TTCCATGAACGAAGTGTTCA+AGG 0.426707 1_4:-8177683 None:intergenic
TTGGAAGTTGTTACTGGTAA+AGG 0.428929 1_4:+8178203 Msa0148000:CDS
TGTGAAATGAAGAAGAGTTT+CGG 0.429316 1_4:-8177635 None:intergenic
TCTTCCTTCTTCAGCTGGAC+CGG 0.429397 1_4:+8178730 Msa0148000:CDS
TCTTCCTTCTTCAGCTGGAC+CGG 0.429397 1_4:+8180361 Msa0148000:CDS
GGTGATTTACTCGGAATTTG+AGG 0.430629 1_4:+8178556 Msa0148000:CDS
GGTGATTTACTCGGAATTTG+AGG 0.430629 1_4:+8180187 Msa0148000:CDS
CGATGGAATTAGGGGCGAAA+TGG 0.432931 1_4:-8177758 None:intergenic
AGGTGCATCCCATATACCTT+TGG 0.435349 1_4:-8181812 None:intergenic
AGTGGTCAGACTTTCCGTTA+TGG 0.435886 1_4:+8178155 Msa0148000:CDS
GCTGAAGAAGGAAGACAAAC+CGG 0.448502 1_4:-8178722 None:intergenic
GCTGAAGAAGGAAGACAAAC+CGG 0.448502 1_4:-8180353 None:intergenic
AATTATAGGTGAGGTGGATG+AGG 0.449429 1_4:+8178534 Msa0148000:intron
AATTATAGGTGAGGTGGATG+AGG 0.449429 1_4:+8180165 Msa0148000:intron
TTCGAACCCATCGGAATTGT+GGG 0.454639 1_4:-8178686 None:intergenic
TTCGAACCCATCGGAATTGT+GGG 0.454639 1_4:-8180317 None:intergenic
GTTCGAACCCATCGGAATTG+TGG 0.455887 1_4:-8178687 None:intergenic
GTTCGAACCCATCGGAATTG+TGG 0.455887 1_4:-8180318 None:intergenic
TAGAAAGTGGATAGATTGCT+TGG 0.458245 1_4:+8181694 Msa0148000:intron
TTAAGCTTGTTCCGAGGTCG+TGG 0.462870 1_4:+8178081 Msa0148000:CDS
TGCTAAAGCCAAAGGTATAT+GGG 0.464646 1_4:+8181804 Msa0148000:CDS
GGTCGTGGACGGATTATCTT+GGG 0.467250 1_4:+8178096 Msa0148000:CDS
ATTTATTCCACCACCACCTA+AGG 0.468688 1_4:+8184552 Msa0148000:CDS
GGGCGAAATGGAAAGAAGAT+TGG 0.474103 1_4:-8177746 None:intergenic
TACTAAAGATGCAGAGTGGC+TGG 0.476282 1_4:+8178583 Msa0148000:CDS
TACTAAAGATGCAGAGTGGC+TGG 0.476282 1_4:+8180214 Msa0148000:CDS
GGCCAAGCCATGGCGGAGAA+AGG 0.478685 1_4:+8177930 Msa0148000:CDS
CAATAGTGGGTACACTAGAA+TGG 0.480738 1_4:-8181929 None:intergenic
TTCAGTTAAAAGGGAAGCTA+CGG 0.483363 1_4:-8177608 None:intergenic
ATCCTCAAACATGGGGTTGG+TGG 0.488134 1_4:+8181904 Msa0148000:CDS
AGCTCTAAGCAATAGAGAAC+CGG 0.488364 1_4:-8178749 None:intergenic
AGCTCTAAGCAATAGAGAAC+CGG 0.488364 1_4:-8180380 None:intergenic
TTATCAGTAGGTGGTCCCTT+AGG 0.488494 1_4:-8184568 None:intergenic
GACCACCAACCCCATGTTTG+AGG 0.489413 1_4:-8181906 None:intergenic
GGAGGGTTGAGATTTGTTGA+GGG 0.491332 1_4:+8181715 Msa0148000:CDS
GATTATCTTGGGTTGACGGT+GGG 0.491823 1_4:+8178107 Msa0148000:CDS
TGTTGAGGGAATAAAATTTG+AGG 0.496430 1_4:+8181729 Msa0148000:CDS
GATGAAACGTCGTCGTTTGG+TGG 0.497366 1_4:-8177720 None:intergenic
AATAGTGGGTACACTAGAAT+GGG 0.499246 1_4:-8181928 None:intergenic
GGTGGTCCCTTAGGTGGTGG+TGG 0.502048 1_4:-8184559 None:intergenic
TCCATCGCTAGTAAAGACTT+TGG 0.502870 1_4:+8177774 Msa0148000:CDS
TCGATCTTCTGAAGTTAATA+CGG 0.504348 1_4:+8178796 Msa0148000:CDS
TCGATCTTCTGAAGTTAATA+CGG 0.504348 1_4:+8180427 Msa0148000:CDS
CCACATCGGCGGTGGTGTAA+GGG 0.506838 1_4:-8177833 None:intergenic
GCCAAAGTCTTTACTAGCGA+TGG 0.507471 1_4:-8177775 None:intergenic
TCTTCCTCACTACACGTCTC+AGG 0.507862 1_4:+8184657 Msa0148000:CDS
TATCTTGGGTTGACGGTGGG+TGG 0.508422 1_4:+8178110 Msa0148000:CDS
ACAGTGGCGGCGCGTGGTAA+CGG 0.517231 1_4:+8177894 Msa0148000:CDS
TTGCCGTTTGAGGACCATAA+CGG 0.518469 1_4:-8178169 None:intergenic
GCTTGTTCCGAGGTCGTGGA+CGG 0.521292 1_4:+8178085 Msa0148000:CDS
ACCATTGTAGTAATTGGTTG+GGG 0.523199 1_4:-8184908 None:intergenic
GGTGGTGTAAGGGCGGAGTA+CGG 0.523423 1_4:-8177823 None:intergenic
TCAAGAAAATCCTCAAACAT+GGG 0.525014 1_4:+8181896 Msa0148000:CDS
GTGATTAATTATAGGTGAGG+TGG 0.525879 1_4:+8178528 Msa0148000:intron
GTGATTAATTATAGGTGAGG+TGG 0.525879 1_4:+8180159 Msa0148000:intron
GACAAGTCCTTTCTCCGCCA+TGG 0.527704 1_4:-8177937 None:intergenic
AACAATGACGACCCTTGTAA+TGG 0.528629 1_4:+8178659 Msa0148000:CDS
AACAATGACGACCCTTGTAA+TGG 0.528629 1_4:+8180290 Msa0148000:CDS
TATTCAATTGTGCTACAACA+AGG 0.537041 1_4:+8184615 Msa0148000:CDS
TTTCCGTTATGGTCCTCAAA+CGG 0.538238 1_4:+8178166 Msa0148000:CDS
TCCTCAAACGGCAAACGTAA+CGG 0.539282 1_4:+8178178 Msa0148000:CDS
GTAAGGGCGGAGTACGGCGA+GGG 0.539751 1_4:-8177817 None:intergenic
GTAGGTGGTCCCTTAGGTGG+TGG 0.540886 1_4:-8184562 None:intergenic
TGTGCCACCAATTTATCAGT+AGG 0.542453 1_4:-8184580 None:intergenic
ATTGTGGGCCAACCATTACA+AGG 0.542464 1_4:-8178671 None:intergenic
ATTGTGGGCCAACCATTACA+AGG 0.542464 1_4:-8180302 None:intergenic
CGCCACTGTTAAATTTGTGG+TGG 0.542938 1_4:-8177880 None:intergenic
GACGGATTATCTTGGGTTGA+CGG 0.542938 1_4:+8178103 Msa0148000:CDS
ACGTGTAAAGCGTGTGGAAG+AGG 0.543242 1_4:+8181780 Msa0148000:CDS
CTCCATCAACGGCCAAGCCA+TGG 0.544156 1_4:+8177920 Msa0148000:CDS
GAACCATTGTAGTAATTGGT+TGG 0.544245 1_4:-8184910 None:intergenic
ATTATAGGTGAGGTGGATGA+GGG 0.546580 1_4:+8178535 Msa0148000:intron
ATTATAGGTGAGGTGGATGA+GGG 0.546580 1_4:+8180166 Msa0148000:intron
TCAGTAGGTGGTCCCTTAGG+TGG 0.547015 1_4:-8184565 None:intergenic
TGGTTGGCCCACAATTCCGA+TGG 0.547575 1_4:+8178679 Msa0148000:CDS
TGGTTGGCCCACAATTCCGA+TGG 0.547575 1_4:+8180310 Msa0148000:CDS
CGACATGCGAGCCACGGCGG+AGG 0.549400 1_4:+8177962 Msa0148000:CDS
CTTACTTGCTTCGCAATAGT+GGG 0.549432 1_4:-8181942 None:intergenic
AGATAATCCGTCCACGACCT+CGG 0.550163 1_4:-8178092 None:intergenic
ATGTAGAAAATGTTGCTGTC+TGG 0.552926 1_4:-8184514 None:intergenic
GAGTACGGCGAGGGGAGTGG+AGG 0.555436 1_4:-8177808 None:intergenic
TGGAGGGTTGAGATTTGTTG+AGG 0.555521 1_4:+8181714 Msa0148000:CDS
CACACGTCGACGTTTCCGGT+GGG 0.555761 1_4:+8178018 Msa0148000:CDS
GGATTATCTTGGGTTGACGG+TGG 0.555995 1_4:+8178106 Msa0148000:CDS
ATTCAATTGTGCTACAACAA+GGG 0.556005 1_4:+8184616 Msa0148000:CDS
TCCCCAACCAATTACTACAA+TGG 0.556720 1_4:+8184907 Msa0148000:three_prime_UTR
AGAACCGGTCCAGCTGAAGA+AGG 0.557947 1_4:-8178734 None:intergenic
AGAACCGGTCCAGCTGAAGA+AGG 0.557947 1_4:-8180365 None:intergenic
AAAATTTGGTTCGAACCCAT+CGG 0.558165 1_4:-8178695 None:intergenic
AAAATTTGGTTCGAACCCAT+CGG 0.558165 1_4:-8180326 None:intergenic
AAAGAAACAACAAGATCGAT+GGG 0.558512 1_4:-8184885 None:intergenic
TAGGTGGTGGTGGAATAAAT+CGG 0.560506 1_4:-8184549 None:intergenic
CCGCCGTGGCTCGCATGTCG+AGG 0.560775 1_4:-8177959 None:intergenic
GAAAGAAACAACAAGATCGA+TGG 0.560783 1_4:-8184886 None:intergenic
CCCTTACACCACCGCCGATG+TGG 0.562433 1_4:+8177833 Msa0148000:CDS
CTGAAGAAGGAAGACAAACC+GGG 0.562836 1_4:-8178721 None:intergenic
CTGAAGAAGGAAGACAAACC+GGG 0.562836 1_4:-8180352 None:intergenic
AAAGTGGATAGATTGCTTGG+AGG 0.565909 1_4:+8181697 Msa0148000:CDS
ATGACGACCCTTGTAATGGT+TGG 0.566251 1_4:+8178663 Msa0148000:CDS
ATGACGACCCTTGTAATGGT+TGG 0.566251 1_4:+8180294 Msa0148000:CDS
TCGACGTAGAGAAGTTGAAA+AGG 0.566784 1_4:-8177987 None:intergenic
GGATGATAGACACTCGGTAG+TGG 0.567626 1_4:+8184489 Msa0148000:CDS
ATCGCTAGTAAAGACTTTGG+CGG 0.568106 1_4:+8177777 Msa0148000:CDS
TTTCAACTTCTCTACGTCGA+CGG 0.568492 1_4:+8177990 Msa0148000:CDS
CCACACGTCGACGTTTCCGG+TGG 0.571833 1_4:+8178017 Msa0148000:CDS
CACCACAAATTTAACAGTGG+CGG 0.573395 1_4:+8177881 Msa0148000:CDS
AAAATCCTCAAACATGGGGT+TGG 0.574467 1_4:+8181901 Msa0148000:CDS
TTCAAGAAAATCCTCAAACA+TGG 0.574533 1_4:+8181895 Msa0148000:CDS
AATTTAACAGTGGCGGCGCG+TGG 0.576208 1_4:+8177888 Msa0148000:CDS
ACGATCAAAATCAGCAATGT+CGG 0.577104 1_4:-8181866 None:intergenic
GACACAAACATGTTCAACCA+TGG 0.577551 1_4:-8181838 None:intergenic
TTTATATATAGGATACGCAA+AGG 0.580837 1_4:-8184988 None:intergenic
TTCTTCCCATAATGCCCCAC+CGG 0.584444 1_4:-8178033 None:intergenic
GTGGATGAGGGTGATTTACT+CGG 0.585431 1_4:+8178547 Msa0148000:CDS
GTGGATGAGGGTGATTTACT+CGG 0.585431 1_4:+8180178 Msa0148000:CDS
TTTATTCCACCACCACCTAA+GGG 0.590375 1_4:+8184553 Msa0148000:CDS
TTATCTAACGCCGGTGTCAG+TGG 0.591550 1_4:+8178137 Msa0148000:CDS
CCACCGGAAACGTCGACGTG+TGG 0.593175 1_4:-8178017 None:intergenic
AACATGTTCAACCATGGGTG+AGG 0.595226 1_4:-8181832 None:intergenic
TGAGGATGATGTGAAGTACA+TGG 0.595819 1_4:+8181747 Msa0148000:CDS
ACACGTCGACGTTTCCGGTG+GGG 0.596713 1_4:+8178019 Msa0148000:CDS
TATGGGATGCACCTCACCCA+TGG 0.601998 1_4:+8181821 Msa0148000:CDS
GAATTGGATGCGACACTTTG+GGG 0.604652 1_4:+8184681 Msa0148000:CDS
AATATGAAAACAAAATTACA+AGG 0.605619 1_4:-8184853 None:intergenic
TAAGGGCGGAGTACGGCGAG+GGG 0.607594 1_4:-8177816 None:intergenic
ACCACCTACTGATAAATTGG+TGG 0.607929 1_4:+8184576 Msa0148000:CDS
GGTTTGAGAAGTAAGTGAAG+TGG 0.609211 1_4:-8177560 None:intergenic
GCCACCAATTTATCAGTAGG+TGG 0.612550 1_4:-8184577 None:intergenic
ACACAAACATGTTCAACCAT+GGG 0.614296 1_4:-8181837 None:intergenic
GAAAGTCTGACCACTGACAC+CGG 0.615663 1_4:-8178147 None:intergenic
TGTCCTCGACATGCGAGCCA+CGG 0.617094 1_4:+8177956 Msa0148000:CDS
GGTAACGGTCACTCCATCAA+CGG 0.617798 1_4:+8177909 Msa0148000:CDS
TGTAAGGGCGGAGTACGGCG+AGG 0.621289 1_4:-8177818 None:intergenic
GGTTGGCCCACAATTCCGAT+GGG 0.621310 1_4:+8178680 Msa0148000:CDS
GGTTGGCCCACAATTCCGAT+GGG 0.621310 1_4:+8180311 Msa0148000:CDS
CAGGTGGGATGATAGACACT+CGG 0.631537 1_4:+8184483 Msa0148000:intron
GAAGAGGATGCTAAAGCCAA+AGG 0.631830 1_4:+8181796 Msa0148000:CDS
TTTGCTACGTGTAAAGCGTG+TGG 0.637512 1_4:+8181774 Msa0148000:CDS
CAAGAAAATCCTCAAACATG+GGG 0.637785 1_4:+8181897 Msa0148000:CDS
CATTGGCTATTCTTGCACCT+GGG 0.639117 1_4:+8184746 Msa0148000:CDS
TTCTCCTGAGACGTGTAGTG+AGG 0.643513 1_4:-8184661 None:intergenic
TTGAAAAGGCTCCTCCGCCG+TGG 0.646401 1_4:-8177973 None:intergenic
CATCGGCGGTGGTGTAAGGG+CGG 0.651775 1_4:-8177830 None:intergenic
TTTACTAGCGATGGAATTAG+GGG 0.652593 1_4:-8177766 None:intergenic
GGTGGAACTTTATCTAACGC+CGG 0.664301 1_4:+8178128 Msa0148000:CDS
CATCAACGGCCAAGCCATGG+CGG 0.679836 1_4:+8177923 Msa0148000:CDS
CCAGGTGCAAGAATAGCCAA+TGG 0.680263 1_4:-8184745 None:intergenic
CCTCGACATGCGAGCCACGG+CGG 0.681570 1_4:+8177959 Msa0148000:CDS
TTACGTGGAAGGGTTCGTTG+TGG 0.686031 1_4:+8178634 Msa0148000:CDS
TTACGTGGAAGGGTTCGTTG+TGG 0.686031 1_4:+8180265 Msa0148000:CDS
TGGCTGGTGACACTACCAGA+AGG 0.701936 1_4:+8178599 Msa0148000:CDS
TGGCTGGTGACACTACCAGA+AGG 0.701936 1_4:+8180230 Msa0148000:CDS
ATTAACTTCAGAAGATCGAG+CGG 0.709501 1_4:-8178792 None:intergenic
ATTAACTTCAGAAGATCGAG+CGG 0.709501 1_4:-8180423 None:intergenic
GTGACACTACCAGAAGGTGA+CGG 0.718693 1_4:+8178605 Msa0148000:CDS
GTGACACTACCAGAAGGTGA+CGG 0.718693 1_4:+8180236 Msa0148000:CDS
TTGTGGGCCAACCATTACAA+GGG 0.722239 1_4:-8178670 None:intergenic
TTGTGGGCCAACCATTACAA+GGG 0.722239 1_4:-8180301 None:intergenic
AACCACCACAAATTTAACAG+TGG 0.724117 1_4:+8177878 Msa0148000:CDS
ACTATACTAAAGATGCAGAG+TGG 0.735948 1_4:+8178579 Msa0148000:CDS
ACTATACTAAAGATGCAGAG+TGG 0.735948 1_4:+8180210 Msa0148000:CDS
AAGAAACAACAAGATCGATG+GGG 0.737164 1_4:-8184884 None:intergenic

CRISPR-GE

badsite warning sgRNA_sequence Strand Position Region GC_content
!!! TTTTTTATTTTTATATTAAA+AGG + chr1_4:8183258-8183277 Msa0148000:intron 0.0%
!! AAAAGATTAAAAAAACAAAT+GGG - chr1_4:8178858-8178877 None:intergenic 10.0%
!! AAAAAGATTAAAAAAACAAA+TGG - chr1_4:8178859-8178878 None:intergenic 10.0%
!!! TTTTCTTTTATAATATATTC+AGG - chr1_4:8179008-8179027 None:intergenic 10.0%
!! CTTAACAAAATTAATAAATA+AGG + chr1_4:8179048-8179067 Msa0148000:intron 10.0%
!!! TTTTCTAAAAAAAAAAATCA+TGG - chr1_4:8179369-8179388 None:intergenic 10.0%
!! AAAAGATTAAAAAAACAAAT+GGG - chr1_4:8178858-8178877 None:intergenic 10.0%
!! AAAAAGATTAAAAAAACAAA+TGG - chr1_4:8178859-8178878 None:intergenic 10.0%
!!! TTTTCTTTTATAATATATTC+AGG - chr1_4:8179008-8179027 None:intergenic 10.0%
!! CTTAACAAAATTAATAAATA+AGG + chr1_4:8179048-8179067 Msa0148000:intron 10.0%
!!! TTTTCTAAAAAAAAAAATCA+TGG - chr1_4:8179369-8179388 None:intergenic 10.0%
!!! TTTTTAATACTTGAAAATTT+AGG + chr1_4:8182040-8182059 Msa0148000:intron 10.0%
!! CAATTTAACTAAAAAAAATA+GGG - chr1_4:8182686-8182705 None:intergenic 10.0%
!!! AAAAAAGATTTTAAAACATT+TGG - chr1_4:8183410-8183429 None:intergenic 10.0%
!!! AAAATCTTTTTTTTTTTTAG+GGG + chr1_4:8183418-8183437 Msa0148000:intron 10.0%
!! AATTGATTGATTAATAATTA+AGG + chr1_4:8184440-8184459 Msa0148000:intron 10.0%
!! CTAATTAATATTATTTAAGT+TGG - chr1_4:8184792-8184811 None:intergenic 10.0%
!!! AAAAATATTGATTTACAATA+TGG - chr1_4:8184941-8184960 None:intergenic 10.0%
!!! ATATTGTAAATCAATATTTT+TGG + chr1_4:8184940-8184959 Msa0148000:three_prime_UTR 10.0%
!!! TATTGTAAATCAATATTTTT+GGG + chr1_4:8184941-8184960 Msa0148000:three_prime_UTR 10.0%
!!! AAATCTTTGTTATTATTGTA+TGG + chr1_4:8178462-8178481 Msa0148000:intron 15.0%
!!! TTTGATTTTGATTTTGATTT+TGG + chr1_4:8178504-8178523 Msa0148000:intron 15.0%
!!! TTGATTTTGATTTTGATTTT+GGG + chr1_4:8178505-8178524 Msa0148000:intron 15.0%
!!! ATTTTTAACTTCAACTTAAT+TGG - chr1_4:8179402-8179421 None:intergenic 15.0%
!!! AAATCTTTGTTATTATTGTA+TGG + chr1_4:8178462-8178481 Msa0148000:intron 15.0%
!!! TTTGATTTTGATTTTGATTT+TGG + chr1_4:8178504-8178523 Msa0148000:intron 15.0%
!!! TTGATTTTGATTTTGATTTT+GGG + chr1_4:8178505-8178524 Msa0148000:intron 15.0%
!!! ATTTTTAACTTCAACTTAAT+TGG - chr1_4:8179402-8179421 None:intergenic 15.0%
!! TATTAAAAATTATGAGACAA+TGG - chr1_4:8182029-8182048 None:intergenic 15.0%
!! ATAGAAAATACTATACATAT+AGG - chr1_4:8182646-8182665 None:intergenic 15.0%
!! ATAGGGAAAAATTTAAAAAT+TGG - chr1_4:8182669-8182688 None:intergenic 15.0%
!! GCAATTTAACTAAAAAAAAT+AGG - chr1_4:8182687-8182706 None:intergenic 15.0%
!!! TGAAAATCTTACTTTTTTTA+GGG - chr1_4:8182941-8182960 None:intergenic 15.0%
!! AACTTTGAATTATCTTTAAT+TGG - chr1_4:8184217-8184236 None:intergenic 15.0%
!! AATATGAAAACAAAATTACA+AGG - chr1_4:8184856-8184875 None:intergenic 15.0%
!!! ATTGTAAATCAATATTTTTG+GGG + chr1_4:8184942-8184961 Msa0148000:three_prime_UTR 15.0%
!! ATAATTTGAATTACCATATC+AGG - chr1_4:8178341-8178360 None:intergenic 20.0%
!!! TGATTTTGATTTTGATTTTG+GGG + chr1_4:8178506-8178525 Msa0148000:intron 20.0%
!! AAAAATGAAACCATTATTAG+TGG + chr1_4:8179416-8179435 Msa0148000:intron 20.0%
!!! GTATATTTGACTTTTTACTT+GGG - chr1_4:8179465-8179484 None:intergenic 20.0%
!!! ATTTGAATTTTTTTTGCCAA+TGG + chr1_4:8179642-8179661 Msa0148000:intron 20.0%
!! ATTGAATTTGAATTCCTTTA+TGG + chr1_4:8179823-8179842 Msa0148000:intron 20.0%
!! ATAATTTGAATTACCATATC+AGG - chr1_4:8178341-8178360 None:intergenic 20.0%
!!! TGATTTTGATTTTGATTTTG+GGG + chr1_4:8178506-8178525 Msa0148000:intron 20.0%
!! AAAAATGAAACCATTATTAG+TGG + chr1_4:8179416-8179435 Msa0148000:intron 20.0%
!!! GTATATTTGACTTTTTACTT+GGG - chr1_4:8179465-8179484 None:intergenic 20.0%
!!! ATTTGAATTTTTTTTGCCAA+TGG + chr1_4:8179642-8179661 Msa0148000:intron 20.0%
!! ATTGAATTTGAATTCCTTTA+TGG + chr1_4:8179823-8179842 Msa0148000:intron 20.0%
!!! ATATATTTTTTTACCGTGAA+AGG + chr1_4:8182109-8182128 Msa0148000:intron 20.0%
!!! TATATTTTTTTACCGTGAAA+GGG + chr1_4:8182110-8182129 Msa0148000:intron 20.0%
!!! AATTTTATAAATGCGTTAGT+TGG + chr1_4:8182154-8182173 Msa0148000:intron 20.0%
!!! ATTTTATAAATGCGTTAGTT+GGG + chr1_4:8182155-8182174 Msa0148000:intron 20.0%
!!! TTAGTTAAATTGCTTCTTTT+TGG + chr1_4:8182694-8182713 Msa0148000:intron 20.0%
!!! ATTTTTTGGTAACACTTTTT+AGG - chr1_4:8182916-8182935 None:intergenic 20.0%
!!! CTTTTTTTAGGGTAATTTTT+TGG - chr1_4:8182930-8182949 None:intergenic 20.0%
!!! GTGAAAATCTTACTTTTTTT+AGG - chr1_4:8182942-8182961 None:intergenic 20.0%
!! AGATAGATAAAGTTGAAAAA+GGG - chr1_4:8183287-8183306 None:intergenic 20.0%
!! AAGATAGATAAAGTTGAAAA+AGG - chr1_4:8183288-8183307 None:intergenic 20.0%
!!! TTTTGTATTTTCTCTTGAAA+TGG + chr1_4:8183698-8183717 Msa0148000:intron 20.0%
!!! TTTGTATTTTCTCTTGAAAT+GGG + chr1_4:8183699-8183718 Msa0148000:intron 20.0%
!!! ACTTACTTTTCATCATTTTA+AGG - chr1_4:8184294-8184313 None:intergenic 20.0%
!!! TGTTGTTTTTATGATTAATC+AGG + chr1_4:8184464-8184483 Msa0148000:intron 20.0%
!!! AAAACAAAATTTTGATCCAT+TGG + chr1_4:8184729-8184748 Msa0148000:CDS 20.0%
!!! ATATTATTTAAGTTGGTTTC+TGG - chr1_4:8184785-8184804 None:intergenic 20.0%
!!! TTGTAAATCAATATTTTTGG+GGG + chr1_4:8184943-8184962 Msa0148000:three_prime_UTR 20.0%
!! GTTTTATGTTTGAAGAGTTT+GGG - chr1_4:8177584-8177603 None:intergenic 25.0%
!!! TTCGGTTTTTTCAGTTAAAA+GGG - chr1_4:8177620-8177639 None:intergenic 25.0%
!!! TTTCGGTTTTTTCAGTTAAA+AGG - chr1_4:8177621-8177640 None:intergenic 25.0%
!!! ATTTTGGGGTGATTAATTAT+AGG + chr1_4:8178520-8178539 Msa0148000:intron 25.0%
!! TTTTGTCTTGTCTAGTATAT+GGG + chr1_4:8179097-8179116 Msa0148000:intron 25.0%
! ACTAATCAAACATAATATGC+CGG - chr1_4:8179205-8179224 None:intergenic 25.0%
! TACGGATATTAGTAATAGTT+TGG - chr1_4:8179236-8179255 None:intergenic 25.0%
!! TGTTTTTCTACCACTAATAA+TGG - chr1_4:8179429-8179448 None:intergenic 25.0%
! AGTGGTAGAAAAACAAATAT+AGG + chr1_4:8179434-8179453 Msa0148000:intron 25.0%
! GTAGAAAAACAAATATAGGT+GGG + chr1_4:8179438-8179457 Msa0148000:intron 25.0%
!!! CGTATATTTGACTTTTTACT+TGG - chr1_4:8179466-8179485 None:intergenic 25.0%
!!! AATTTTTTTTGCCAATGGTT+GGG + chr1_4:8179647-8179666 Msa0148000:intron 25.0%
! TACTAAAAAGCTTGTATTGT+TGG + chr1_4:8179730-8179749 Msa0148000:intron 25.0%
!! CTATTTTATGCTAATAGCTA+AGG - chr1_4:8179799-8179818 None:intergenic 25.0%
! TTTGAATTCCTTTATGGTTA+AGG + chr1_4:8179829-8179848 Msa0148000:intron 25.0%
!!! CATTTTAACCTTAACCATAA+AGG - chr1_4:8179840-8179859 None:intergenic 25.0%
! CTTTATGGTTAAGGTTAAAA+TGG + chr1_4:8179838-8179857 Msa0148000:intron 25.0%
!!! ATTTTGGGGTGATTAATTAT+AGG + chr1_4:8178520-8178539 Msa0148000:intron 25.0%
!! TTTTGTCTTGTCTAGTATAT+GGG + chr1_4:8179097-8179116 Msa0148000:intron 25.0%
! ACTAATCAAACATAATATGC+CGG - chr1_4:8179205-8179224 None:intergenic 25.0%
! TACGGATATTAGTAATAGTT+TGG - chr1_4:8179236-8179255 None:intergenic 25.0%
!! TGTTTTTCTACCACTAATAA+TGG - chr1_4:8179429-8179448 None:intergenic 25.0%
! AGTGGTAGAAAAACAAATAT+AGG + chr1_4:8179434-8179453 Msa0148000:intron 25.0%
! GTAGAAAAACAAATATAGGT+GGG + chr1_4:8179438-8179457 Msa0148000:intron 25.0%
!!! CGTATATTTGACTTTTTACT+TGG - chr1_4:8179466-8179485 None:intergenic 25.0%
!!! AATTTTTTTTGCCAATGGTT+GGG + chr1_4:8179647-8179666 Msa0148000:intron 25.0%
! TACTAAAAAGCTTGTATTGT+TGG + chr1_4:8179730-8179749 Msa0148000:intron 25.0%
!! CTATTTTATGCTAATAGCTA+AGG - chr1_4:8179799-8179818 None:intergenic 25.0%
! TTTGAATTCCTTTATGGTTA+AGG + chr1_4:8179829-8179848 Msa0148000:intron 25.0%
!!! CATTTTAACCTTAACCATAA+AGG - chr1_4:8179840-8179859 None:intergenic 25.0%
! CTTTATGGTTAAGGTTAAAA+TGG + chr1_4:8179838-8179857 Msa0148000:intron 25.0%
! TATCACTATGTTACATAGAA+AGG + chr1_4:8181991-8182010 Msa0148000:intron 25.0%
!! ATTTTATCATGATTATGACG+AGG + chr1_4:8182222-8182241 Msa0148000:intron 25.0%
! AAAGGTTAATAAGCCAAAAT+GGG + chr1_4:8182509-8182528 Msa0148000:intron 25.0%
! AATTCAAGATGAGATAAAGA+AGG - chr1_4:8182609-8182628 None:intergenic 25.0%
! TTCTTTATCTCATCTTGAAT+TGG + chr1_4:8182608-8182627 Msa0148000:intron 25.0%
! ATTCATAAAATATGCAATGC+AGG - chr1_4:8182738-8182757 None:intergenic 25.0%
!! CTAAAATGAGTAGTTTGTAA+TGG + chr1_4:8182804-8182823 Msa0148000:intron 25.0%
! TGAGAAAAAACAGATAGAAA+AGG - chr1_4:8183001-8183020 None:intergenic 25.0%
!!! TGCAATTAGCTTTGTTTATA+TGG - chr1_4:8183169-8183188 None:intergenic 25.0%
! TAGTTGATTACTATCAAATG+TGG + chr1_4:8183214-8183233 Msa0148000:intron 25.0%
! GATAGATAAAGTTGAAAAAG+GGG - chr1_4:8183286-8183305 None:intergenic 25.0%
!!! TCTTTTTTTTTTTTAGGGGA+AGG + chr1_4:8183422-8183441 Msa0148000:intron 25.0%
!!! TTTTTCTAAGGATTGGAATT+TGG + chr1_4:8183791-8183810 Msa0148000:intron 25.0%
! AATGTTCTAATAATGTTGGT+GGG - chr1_4:8183918-8183937 None:intergenic 25.0%
! ATGCAATGTTCTAATAATGT+TGG - chr1_4:8183922-8183941 None:intergenic 25.0%
! ACACTAAAGGAATATTATGT+AGG - chr1_4:8183968-8183987 None:intergenic 25.0%
!! TTTTAATCAACAGTTAGTCA+AGG + chr1_4:8184130-8184149 Msa0148000:intron 25.0%
! TTTAATCAACAGTTAGTCAA+GGG + chr1_4:8184131-8184150 Msa0148000:intron 25.0%
!!! AGTATGACTTATTTTACTCT+AGG + chr1_4:8184316-8184335 Msa0148000:intron 25.0%
!! TTCTAGAGAGAAAATAAAAC+AGG - chr1_4:8184353-8184372 None:intergenic 25.0%
! AGAATTGCAATCACAATTTA+GGG - chr1_4:8184420-8184439 None:intergenic 25.0%
! TAGAATTGCAATCACAATTT+AGG - chr1_4:8184421-8184440 None:intergenic 25.0%
!!! TGTTTTTATGATTAATCAGG+TGG + chr1_4:8184467-8184486 Msa0148000:intron 25.0%
!! GTTTTTATGATTAATCAGGT+GGG + chr1_4:8184468-8184487 Msa0148000:intron 25.0%
!!! GATCAAAATTTTGTTTTCTC+TGG - chr1_4:8184726-8184745 None:intergenic 25.0%
! TTTATATATAGGATACGCAA+AGG - chr1_4:8184991-8185010 None:intergenic 25.0%
! CGTTTTATGTTTGAAGAGTT+TGG - chr1_4:8177585-8177604 None:intergenic 30.0%
TGTGAAATGAAGAAGAGTTT+CGG - chr1_4:8177638-8177657 None:intergenic 30.0%
GTAAGCTATCATGTTTGTTT+GGG - chr1_4:8177664-8177683 None:intergenic 30.0%
CAAGTAAGTTTAAATGAGTC+CGG + chr1_4:8178430-8178449 Msa0148000:intron 30.0%
ACAAAGATTTGACATATGTC+CGG - chr1_4:8178452-8178471 None:intergenic 30.0%
! GTATGGAGTAGTTTATGTTT+TGG + chr1_4:8178479-8178498 Msa0148000:intron 30.0%
!! TCGATCTTCTGAAGTTAATA+CGG + chr1_4:8178796-8178815 Msa0148000:CDS 30.0%
TTCTTTACAATAAACCCGAA+CGG - chr1_4:8178909-8178928 None:intergenic 30.0%
AAGACAAAAGAACACGAAAA+TGG - chr1_4:8179086-8179105 None:intergenic 30.0%
! CTTTTGTCTTGTCTAGTATA+TGG + chr1_4:8179096-8179115 Msa0148000:intron 30.0%
CTAGTATATGGGAATTGTAA+AGG + chr1_4:8179108-8179127 Msa0148000:intron 30.0%
! TAATATTGATTGACCTAGCT+TGG + chr1_4:8179343-8179362 Msa0148000:intron 30.0%
GGTAGAAAAACAAATATAGG+TGG + chr1_4:8179437-8179456 Msa0148000:intron 30.0%
AGATAACGTCACATATCATT+TGG + chr1_4:8179567-8179586 Msa0148000:intron 30.0%
GATAACGTCACATATCATTT+GGG + chr1_4:8179568-8179587 Msa0148000:intron 30.0%
TATCATTTGGGTATAAGTGT+TGG + chr1_4:8179580-8179599 Msa0148000:intron 30.0%
!!! GAATTTTTTTTGCCAATGGT+TGG + chr1_4:8179646-8179665 Msa0148000:intron 30.0%
!!! ATTTTTTTTGCCAATGGTTG+GGG + chr1_4:8179648-8179667 Msa0148000:intron 30.0%
TAATGTGTCAGAAAATCCAA+TGG - chr1_4:8179705-8179724 None:intergenic 30.0%
ATCTCAATAATCAGAGCAAA+TGG - chr1_4:8179886-8179905 None:intergenic 30.0%
CAAGTAAGTTTAAATGAGTC+CGG + chr1_4:8178430-8178449 Msa0148000:intron 30.0%
ACAAAGATTTGACATATGTC+CGG - chr1_4:8178452-8178471 None:intergenic 30.0%
! GTATGGAGTAGTTTATGTTT+TGG + chr1_4:8178479-8178498 Msa0148000:intron 30.0%
!! TCGATCTTCTGAAGTTAATA+CGG + chr1_4:8178796-8178815 Msa0148000:CDS 30.0%
TTCTTTACAATAAACCCGAA+CGG - chr1_4:8178909-8178928 None:intergenic 30.0%
AAGACAAAAGAACACGAAAA+TGG - chr1_4:8179086-8179105 None:intergenic 30.0%
! CTTTTGTCTTGTCTAGTATA+TGG + chr1_4:8179096-8179115 Msa0148000:intron 30.0%
CTAGTATATGGGAATTGTAA+AGG + chr1_4:8179108-8179127 Msa0148000:intron 30.0%
! TAATATTGATTGACCTAGCT+TGG + chr1_4:8179343-8179362 Msa0148000:intron 30.0%
GGTAGAAAAACAAATATAGG+TGG + chr1_4:8179437-8179456 Msa0148000:intron 30.0%
AGATAACGTCACATATCATT+TGG + chr1_4:8179567-8179586 Msa0148000:intron 30.0%
GATAACGTCACATATCATTT+GGG + chr1_4:8179568-8179587 Msa0148000:intron 30.0%
TATCATTTGGGTATAAGTGT+TGG + chr1_4:8179580-8179599 Msa0148000:intron 30.0%
!!! GAATTTTTTTTGCCAATGGT+TGG + chr1_4:8179646-8179665 Msa0148000:intron 30.0%
!!! ATTTTTTTTGCCAATGGTTG+GGG + chr1_4:8179648-8179667 Msa0148000:intron 30.0%
TAATGTGTCAGAAAATCCAA+TGG - chr1_4:8179705-8179724 None:intergenic 30.0%
ATCTCAATAATCAGAGCAAA+TGG - chr1_4:8179886-8179905 None:intergenic 30.0%
!!! TCCAGAAAATGATGGTTTTT+TGG - chr1_4:8181577-8181596 None:intergenic 30.0%
CCACTTTCTACAATATATCA+AGG - chr1_4:8181684-8181703 None:intergenic 30.0%
CCTTGATATATTGTAGAAAG+TGG + chr1_4:8181681-8181700 Msa0148000:intron 30.0%
TGTTGAGGGAATAAAATTTG+AGG + chr1_4:8181729-8181748 Msa0148000:CDS 30.0%
TTCAAGAAAATCCTCAAACA+TGG + chr1_4:8181895-8181914 Msa0148000:CDS 30.0%
TCAAGAAAATCCTCAAACAT+GGG + chr1_4:8181896-8181915 Msa0148000:CDS 30.0%
ATTCATATACTTTGCAACCA+AGG - chr1_4:8182366-8182385 None:intergenic 30.0%
GAAAGGTTAATAAGCCAAAA+TGG + chr1_4:8182508-8182527 Msa0148000:intron 30.0%
CATCTTGAATTGGTACTTTA+TGG + chr1_4:8182618-8182637 Msa0148000:intron 30.0%
!! AAATTGCTTCTTTTTGGTAG+TGG + chr1_4:8182700-8182719 Msa0148000:intron 30.0%
! AAGGAGTGATAGTGAATAAT+AGG - chr1_4:8183090-8183109 None:intergenic 30.0%
CAACGTCAATTTGAAAATTC+TGG + chr1_4:8183322-8183341 Msa0148000:intron 30.0%
!!! ATCCAGTAATCAGGTTTTTT+CGG + chr1_4:8183447-8183466 Msa0148000:intron 30.0%
ATATCCTTGTCCATTCTTAT+TGG - chr1_4:8183646-8183665 None:intergenic 30.0%
TCAAGAGAAAATACAAAACC+TGG - chr1_4:8183696-8183715 None:intergenic 30.0%
!!! TATTGATGCTGCTTTTTCTA+AGG + chr1_4:8183779-8183798 Msa0148000:intron 30.0%
ATGTTCTAATAATGTTGGTG+GGG - chr1_4:8183917-8183936 None:intergenic 30.0%
CAATGTTCTAATAATGTTGG+TGG - chr1_4:8183919-8183938 None:intergenic 30.0%
GAATATTATGTAGGAGGTTA+TGG - chr1_4:8183959-8183978 None:intergenic 30.0%
CTAAAGGAATATTATGTAGG+AGG - chr1_4:8183965-8183984 None:intergenic 30.0%
AAACCAATAATACTAGTAGC+AGG + chr1_4:8183996-8184015 Msa0148000:intron 30.0%
!! TTGAAGGAGTATTATGTAGA+AGG - chr1_4:8184034-8184053 None:intergenic 30.0%
TTAATCAACAGTTAGTCAAG+GGG + chr1_4:8184132-8184151 Msa0148000:intron 30.0%
TCAAGGGGTTAAATTATCTT+TGG + chr1_4:8184147-8184166 Msa0148000:intron 30.0%
!!! ATGACTTATTTTACTCTAGG+TGG + chr1_4:8184319-8184338 Msa0148000:intron 30.0%
GAGAAAATAAAACAGGATCT+TGG - chr1_4:8184346-8184365 None:intergenic 30.0%
TATTCAATTGTGCTACAACA+AGG + chr1_4:8184615-8184634 Msa0148000:CDS 30.0%
ATTCAATTGTGCTACAACAA+GGG + chr1_4:8184616-8184635 Msa0148000:CDS 30.0%
AAAGAAACAACAAGATCGAT+GGG - chr1_4:8184888-8184907 None:intergenic 30.0%
AACCATTGTAGTAATTGGTT+GGG - chr1_4:8184912-8184931 None:intergenic 30.0%
TGATGAACCATTGTAGTAAT+TGG - chr1_4:8184917-8184936 None:intergenic 30.0%
TTCAGTTAAAAGGGAAGCTA+CGG - chr1_4:8177611-8177630 None:intergenic 35.0%
GGTAAGCTATCATGTTTGTT+TGG - chr1_4:8177665-8177684 None:intergenic 35.0%
TTTACTAGCGATGGAATTAG+GGG - chr1_4:8177769-8177788 None:intergenic 35.0%
CTTTACTAGCGATGGAATTA+GGG - chr1_4:8177770-8177789 None:intergenic 35.0%
TCTTTACTAGCGATGGAATT+AGG - chr1_4:8177771-8177790 None:intergenic 35.0%
! TTTTACGGCTTTTACCACAT+CGG - chr1_4:8177850-8177869 None:intergenic 35.0%
AACCACCACAAATTTAACAG+TGG + chr1_4:8177878-8177897 Msa0148000:CDS 35.0%
TTGGAAGTTGTTACTGGTAA+AGG + chr1_4:8178203-8178222 Msa0148000:CDS 35.0%
GTGATTAATTATAGGTGAGG+TGG + chr1_4:8178528-8178547 Msa0148000:intron 35.0%
ACTATACTAAAGATGCAGAG+TGG + chr1_4:8178579-8178598 Msa0148000:CDS 35.0%
! AAAATTTGGTTCGAACCCAT+CGG - chr1_4:8178698-8178717 None:intergenic 35.0%
! TTCGAACCAAATTTTCAACC+CGG + chr1_4:8178703-8178722 Msa0148000:CDS 35.0%
ATTAACTTCAGAAGATCGAG+CGG - chr1_4:8178795-8178814 None:intergenic 35.0%
! TCCGAAATTTTACATGACAC+CGG + chr1_4:8179183-8179202 Msa0148000:intron 35.0%
ACGACACTAACATAGACATA+CGG - chr1_4:8179254-8179273 None:intergenic 35.0%
AAAAAAATCATGGCCAAGCT+AGG - chr1_4:8179359-8179378 None:intergenic 35.0%
ACATGTACGAAGTTGAGATA+TGG + chr1_4:8179500-8179519 Msa0148000:intron 35.0%
!!! TTGGGTATAAGTGTTGGTTT+TGG + chr1_4:8179586-8179605 Msa0148000:intron 35.0%
!!! TTTTTTTTGCCAATGGTTGG+GGG + chr1_4:8179649-8179668 Msa0148000:intron 35.0%
! GCAAAGTACAGTGTCTTATT+CGG - chr1_4:8179766-8179785 None:intergenic 35.0%
TCTGATTATTGAGATCTTGC+TGG + chr1_4:8179891-8179910 Msa0148000:intron 35.0%
GTGATTAATTATAGGTGAGG+TGG + chr1_4:8178528-8178547 Msa0148000:intron 35.0%
ACTATACTAAAGATGCAGAG+TGG + chr1_4:8178579-8178598 Msa0148000:CDS 35.0%
! AAAATTTGGTTCGAACCCAT+CGG - chr1_4:8178698-8178717 None:intergenic 35.0%
! TTCGAACCAAATTTTCAACC+CGG + chr1_4:8178703-8178722 Msa0148000:CDS 35.0%
ATTAACTTCAGAAGATCGAG+CGG - chr1_4:8178795-8178814 None:intergenic 35.0%
! TCCGAAATTTTACATGACAC+CGG + chr1_4:8179183-8179202 Msa0148000:intron 35.0%
ACGACACTAACATAGACATA+CGG - chr1_4:8179254-8179273 None:intergenic 35.0%
AAAAAAATCATGGCCAAGCT+AGG - chr1_4:8179359-8179378 None:intergenic 35.0%
ACATGTACGAAGTTGAGATA+TGG + chr1_4:8179500-8179519 Msa0148000:intron 35.0%
!!! TTGGGTATAAGTGTTGGTTT+TGG + chr1_4:8179586-8179605 Msa0148000:intron 35.0%
!!! TTTTTTTTGCCAATGGTTGG+GGG + chr1_4:8179649-8179668 Msa0148000:intron 35.0%
! GCAAAGTACAGTGTCTTATT+CGG - chr1_4:8179766-8179785 None:intergenic 35.0%
!!! GATGGTTTTTTGGCCATTTA+CGG - chr1_4:8181567-8181586 None:intergenic 35.0%
! GCCAAAAAACCATCATTTTC+TGG + chr1_4:8181573-8181592 Msa0148000:intron 35.0%
CTACAGATTCCAGAAAATGA+TGG - chr1_4:8181585-8181604 None:intergenic 35.0%
TAGAAAGTGGATAGATTGCT+TGG + chr1_4:8181694-8181713 Msa0148000:intron 35.0%
! ATGCTAAAGCCAAAGGTATA+TGG + chr1_4:8181803-8181822 Msa0148000:CDS 35.0%
! TGCTAAAGCCAAAGGTATAT+GGG + chr1_4:8181804-8181823 Msa0148000:CDS 35.0%
ACACAAACATGTTCAACCAT+GGG - chr1_4:8181840-8181859 None:intergenic 35.0%
ACGATCAAAATCAGCAATGT+CGG - chr1_4:8181869-8181888 None:intergenic 35.0%
CAAGAAAATCCTCAAACATG+GGG + chr1_4:8181897-8181916 Msa0148000:CDS 35.0%
!! AATAGTGGGTACACTAGAAT+GGG - chr1_4:8181931-8181950 None:intergenic 35.0%
!!! TTTTTTTACCGTGAAAGGGA+AGG + chr1_4:8182114-8182133 Msa0148000:intron 35.0%
TATAAATGCGTTAGTTGGGT+TGG + chr1_4:8182159-8182178 Msa0148000:intron 35.0%
!! GATTTTGACATGAACTGCTA+AGG + chr1_4:8182188-8182207 Msa0148000:intron 35.0%
TAAAAACTAGCTACCACTAG+TGG + chr1_4:8182254-8182273 Msa0148000:intron 35.0%
TGTTCATATGTTACCACTAG+TGG - chr1_4:8182270-8182289 None:intergenic 35.0%
CACATAAAGCAAGAGAGATA+TGG + chr1_4:8182307-8182326 Msa0148000:intron 35.0%
!! TTTCACCCTAATTTGCTTCA+AGG + chr1_4:8182405-8182424 Msa0148000:intron 35.0%
! CAAGGACCACCAATTTTAAA+CGG + chr1_4:8182423-8182442 Msa0148000:intron 35.0%
! AAGGACCACCAATTTTAAAC+GGG + chr1_4:8182424-8182443 Msa0148000:intron 35.0%
GCTCATTAAACGCAATTAGT+TGG + chr1_4:8183511-8183530 Msa0148000:intron 35.0%
GATCGATGAAAACGAGATAT+TGG + chr1_4:8183575-8183594 Msa0148000:intron 35.0%
TTCCAACAACGTATCTTTCA+TGG + chr1_4:8183611-8183630 Msa0148000:intron 35.0%
! GTCAGTTTTGCCAATAAGAA+TGG + chr1_4:8183633-8183652 Msa0148000:intron 35.0%
TTTGCCAATAAGAATGGACA+AGG + chr1_4:8183639-8183658 Msa0148000:intron 35.0%
AAGGATATTTATTCGCCAAC+CGG + chr1_4:8183658-8183677 Msa0148000:intron 35.0%
CAAAAACAAAATCTCCCTTG+TGG + chr1_4:8183739-8183758 Msa0148000:intron 35.0%
!!! ATGCTGCTTTTTCTAAGGAT+TGG + chr1_4:8183784-8183803 Msa0148000:intron 35.0%
ACTTAAACCAGTTGCAGATT+GGG - chr1_4:8183856-8183875 None:intergenic 35.0%
AATGCATGAGGTCAATTCAT+GGG - chr1_4:8183888-8183907 None:intergenic 35.0%
TAATGCATGAGGTCAATTCA+TGG - chr1_4:8183889-8183908 None:intergenic 35.0%
! TGTTCTAATAATGTTGGTGG+GGG - chr1_4:8183916-8183935 None:intergenic 35.0%
GATCCTGCTACTAGTATTAT+TGG - chr1_4:8184002-8184021 None:intergenic 35.0%
ATGTAGAAAATGTTGCTGTC+TGG - chr1_4:8184517-8184536 None:intergenic 35.0%
!!! CTGGAAAATATTTTTTGCCC+AGG - chr1_4:8184766-8184785 None:intergenic 35.0%
AAGAAACAACAAGATCGATG+GGG - chr1_4:8184887-8184906 None:intergenic 35.0%
GAAAGAAACAACAAGATCGA+TGG - chr1_4:8184889-8184908 None:intergenic 35.0%
ACCATTGTAGTAATTGGTTG+GGG - chr1_4:8184911-8184930 None:intergenic 35.0%
GAACCATTGTAGTAATTGGT+TGG - chr1_4:8184913-8184932 None:intergenic 35.0%
GGTTTGAGAAGTAAGTGAAG+TGG - chr1_4:8177563-8177582 None:intergenic 40.0%
TACCTTGAACACTTCGTTCA+TGG + chr1_4:8177681-8177700 Msa0148000:CDS 40.0%
! TTCCATGAACGAAGTGTTCA+AGG - chr1_4:8177686-8177705 None:intergenic 40.0%
TCCATCGCTAGTAAAGACTT+TGG + chr1_4:8177774-8177793 Msa0148000:CDS 40.0%
ATCGCTAGTAAAGACTTTGG+CGG + chr1_4:8177777-8177796 Msa0148000:CDS 40.0%
CACCACAAATTTAACAGTGG+CGG + chr1_4:8177881-8177900 Msa0148000:CDS 40.0%
TCGACGTAGAGAAGTTGAAA+AGG - chr1_4:8177990-8178009 None:intergenic 40.0%
TTTCAACTTCTCTACGTCGA+CGG + chr1_4:8177990-8178009 Msa0148000:CDS 40.0%
!! CGAATTTTAAGCTTGTTCCG+AGG + chr1_4:8178075-8178094 Msa0148000:CDS 40.0%
TTTCCGTTATGGTCCTCAAA+CGG + chr1_4:8178166-8178185 Msa0148000:CDS 40.0%
ACGGAATTGGAAGTTGTTAC+TGG + chr1_4:8178197-8178216 Msa0148000:CDS 40.0%
!!! GAGCTCTTTTTTGCTTCACT+TGG + chr1_4:8178260-8178279 Msa0148000:CDS 40.0%
!!! CTCTTTTTTGCTTCACTTGG+TGG + chr1_4:8178263-8178282 Msa0148000:CDS 40.0%
!! AGCTTGTTGAAGAACGATTC+TGG - chr1_4:8178318-8178337 None:intergenic 40.0%
TCTTCAACAAGCTCCTGATA+TGG + chr1_4:8178325-8178344 Msa0148000:CDS 40.0%
GGGGTGATTAATTATAGGTG+AGG + chr1_4:8178525-8178544 Msa0148000:intron 40.0%
AATTATAGGTGAGGTGGATG+AGG + chr1_4:8178534-8178553 Msa0148000:intron 40.0%
ATTATAGGTGAGGTGGATGA+GGG + chr1_4:8178535-8178554 Msa0148000:intron 40.0%
GGTGATTTACTCGGAATTTG+AGG + chr1_4:8178556-8178575 Msa0148000:CDS 40.0%
TAATCAAAACCGTCACCTTC+TGG - chr1_4:8178617-8178636 None:intergenic 40.0%
!!! ACGGTTTTGATTACGTGGAA+GGG + chr1_4:8178624-8178643 Msa0148000:CDS 40.0%
AACAATGACGACCCTTGTAA+TGG + chr1_4:8178659-8178678 Msa0148000:CDS 40.0%
! GACAAACCGGGTTGAAAATT+TGG - chr1_4:8178712-8178731 None:intergenic 40.0%
!! AGCTCTAAGCAATAGAGAAC+CGG - chr1_4:8178752-8178771 None:intergenic 40.0%
!!! TTTTTTATCCGTGCTCCGTT+CGG + chr1_4:8178891-8178910 Msa0148000:intron 40.0%
!! GCCGGTGTCATGTAAAATTT+CGG - chr1_4:8179187-8179206 None:intergenic 40.0%
CAATGACACAATATTGACCC+TGG + chr1_4:8179301-8179320 Msa0148000:intron 40.0%
TCTCAACTTCGTACATGTGT+AGG - chr1_4:8179498-8179517 None:intergenic 40.0%
ACGAAGTTGAGATATGGAAG+AGG + chr1_4:8179506-8179525 Msa0148000:intron 40.0%
GGTCGTAATGTATCTTCCAT+TGG + chr1_4:8179686-8179705 Msa0148000:intron 40.0%
GATTATTGAGATCTTGCTGG+TGG + chr1_4:8179894-8179913 Msa0148000:intron 40.0%
!! AGCTTGTTGAAGAACGATTC+TGG - chr1_4:8178318-8178337 None:intergenic 40.0%
TCTTCAACAAGCTCCTGATA+TGG + chr1_4:8178325-8178344 Msa0148000:CDS 40.0%
GGGGTGATTAATTATAGGTG+AGG + chr1_4:8178525-8178544 Msa0148000:intron 40.0%
AATTATAGGTGAGGTGGATG+AGG + chr1_4:8178534-8178553 Msa0148000:intron 40.0%
ATTATAGGTGAGGTGGATGA+GGG + chr1_4:8178535-8178554 Msa0148000:intron 40.0%
GGTGATTTACTCGGAATTTG+AGG + chr1_4:8178556-8178575 Msa0148000:CDS 40.0%
TAATCAAAACCGTCACCTTC+TGG - chr1_4:8178617-8178636 None:intergenic 40.0%
!!! ACGGTTTTGATTACGTGGAA+GGG + chr1_4:8178624-8178643 Msa0148000:CDS 40.0%
AACAATGACGACCCTTGTAA+TGG + chr1_4:8178659-8178678 Msa0148000:CDS 40.0%
! GACAAACCGGGTTGAAAATT+TGG - chr1_4:8178712-8178731 None:intergenic 40.0%
!! AGCTCTAAGCAATAGAGAAC+CGG - chr1_4:8178752-8178771 None:intergenic 40.0%
!!! TTTTTTATCCGTGCTCCGTT+CGG + chr1_4:8178891-8178910 Msa0148000:intron 40.0%
!! GCCGGTGTCATGTAAAATTT+CGG - chr1_4:8179187-8179206 None:intergenic 40.0%
CAATGACACAATATTGACCC+TGG + chr1_4:8179301-8179320 Msa0148000:intron 40.0%
TCTCAACTTCGTACATGTGT+AGG - chr1_4:8179498-8179517 None:intergenic 40.0%
ACGAAGTTGAGATATGGAAG+AGG + chr1_4:8179506-8179525 Msa0148000:intron 40.0%
GGTCGTAATGTATCTTCCAT+TGG + chr1_4:8179686-8179705 Msa0148000:intron 40.0%
! TTGAGATCTTGCTGACGTTT+TGG + chr1_4:8181530-8181549 Msa0148000:intron 40.0%
AAAGTGGATAGATTGCTTGG+AGG + chr1_4:8181697-8181716 Msa0148000:CDS 40.0%
AAGTGGATAGATTGCTTGGA+GGG + chr1_4:8181698-8181717 Msa0148000:CDS 40.0%
TGAGGATGATGTGAAGTACA+TGG + chr1_4:8181747-8181766 Msa0148000:CDS 40.0%
GACACAAACATGTTCAACCA+TGG - chr1_4:8181841-8181860 None:intergenic 40.0%
AAAATCAGCAATGTCGGTCT+TGG - chr1_4:8181863-8181882 None:intergenic 40.0%
AAAATCCTCAAACATGGGGT+TGG + chr1_4:8181901-8181920 Msa0148000:CDS 40.0%
!! CAATAGTGGGTACACTAGAA+TGG - chr1_4:8181932-8181951 None:intergenic 40.0%
CTTACTTGCTTCGCAATAGT+GGG - chr1_4:8181945-8181964 None:intergenic 40.0%
ACTTACTTGCTTCGCAATAG+TGG - chr1_4:8181946-8181965 None:intergenic 40.0%
ATAGCTTTCCTTCCCTTTCA+CGG - chr1_4:8182125-8182144 None:intergenic 40.0%
TTGACATGAACTGCTAAGGT+TGG + chr1_4:8182192-8182211 Msa0148000:intron 40.0%
ATTAGGGTGAAAGAGGCAAA+TGG - chr1_4:8182397-8182416 None:intergenic 40.0%
GAAGCAAATTAGGGTGAAAG+AGG - chr1_4:8182404-8182423 None:intergenic 40.0%
GTGGTCCTTGAAGCAAATTA+GGG - chr1_4:8182413-8182432 None:intergenic 40.0%
! AGGACCACCAATTTTAAACG+GGG + chr1_4:8182425-8182444 Msa0148000:intron 40.0%
! TTACCCACCCCGTTTAAAAT+TGG - chr1_4:8182435-8182454 None:intergenic 40.0%
GCACTTGTGTTGAACTAGAA+AGG + chr1_4:8182491-8182510 Msa0148000:intron 40.0%
TGGTGAAGTGTATGGGAAAT+GGG - chr1_4:8182537-8182556 None:intergenic 40.0%
ATGGTGAAGTGTATGGGAAA+TGG - chr1_4:8182538-8182557 None:intergenic 40.0%
!!! CTTCTTTTTGGTAGTGGTCA+GGG + chr1_4:8182706-8182725 Msa0148000:intron 40.0%
TGTTTATATGGCTGTCCTAC+CGG - chr1_4:8183157-8183176 None:intergenic 40.0%
CTCCGAAAAAACCTGATTAC+TGG - chr1_4:8183452-8183471 None:intergenic 40.0%
! CTCGTTTTCATCGATCACAA+AGG - chr1_4:8183571-8183590 None:intergenic 40.0%
GACCATGAAAGATACGTTGT+TGG - chr1_4:8183616-8183635 None:intergenic 40.0%
CATCAATATCCCTGTGTATG+TGG - chr1_4:8183767-8183786 None:intergenic 40.0%
! GAATTTGGTTCCCTCTTCAA+GGG + chr1_4:8183806-8183825 Msa0148000:intron 40.0%
GACTTAAACCAGTTGCAGAT+TGG - chr1_4:8183857-8183876 None:intergenic 40.0%
! GTTCTAATAATGTTGGTGGG+GGG - chr1_4:8183915-8183934 None:intergenic 40.0%
ATTAGAACATTGCATCGCGT+AGG + chr1_4:8183927-8183946 Msa0148000:intron 40.0%
GGTTTAAGTCGAGACACTAA+AGG - chr1_4:8183981-8184000 None:intergenic 40.0%
! GGAGTATTATGTAGAAGGTC+AGG - chr1_4:8184029-8184048 None:intergenic 40.0%
!! TAGGTGGTGGTGGAATAAAT+CGG - chr1_4:8184552-8184571 None:intergenic 40.0%
ATTTATTCCACCACCACCTA+AGG + chr1_4:8184552-8184571 Msa0148000:CDS 40.0%
TTTATTCCACCACCACCTAA+GGG + chr1_4:8184553-8184572 Msa0148000:CDS 40.0%
ACCACCTACTGATAAATTGG+TGG + chr1_4:8184576-8184595 Msa0148000:CDS 40.0%
TGTGCCACCAATTTATCAGT+AGG - chr1_4:8184583-8184602 None:intergenic 40.0%
AGAATTGGATGCGACACTTT+GGG + chr1_4:8184680-8184699 Msa0148000:CDS 40.0%
TCCCCAACCAATTACTACAA+TGG + chr1_4:8184907-8184926 Msa0148000:three_prime_UTR 40.0%
AGAGATGAAACGTCGTCGTT+TGG - chr1_4:8177726-8177745 None:intergenic 45.0%
GGGCGAAATGGAAAGAAGAT+TGG - chr1_4:8177749-8177768 None:intergenic 45.0%
GCCAAAGTCTTTACTAGCGA+TGG - chr1_4:8177778-8177797 None:intergenic 45.0%
CGCCACTGTTAAATTTGTGG+TGG - chr1_4:8177883-8177902 None:intergenic 45.0%
!! GACGGATTATCTTGGGTTGA+CGG + chr1_4:8178103-8178122 Msa0148000:CDS 45.0%
!! GATTATCTTGGGTTGACGGT+GGG + chr1_4:8178107-8178126 Msa0148000:CDS 45.0%
GGTGGAACTTTATCTAACGC+CGG + chr1_4:8178128-8178147 Msa0148000:CDS 45.0%
AGTGGTCAGACTTTCCGTTA+TGG + chr1_4:8178155-8178174 Msa0148000:CDS 45.0%
! TTGCCGTTTGAGGACCATAA+CGG - chr1_4:8178172-8178191 None:intergenic 45.0%
TCCTCAAACGGCAAACGTAA+CGG + chr1_4:8178178-8178197 Msa0148000:CDS 45.0%
! AACGGCAAACGTAACGGAAT+TGG + chr1_4:8178184-8178203 Msa0148000:CDS 45.0%
! TTTGCTTCACTTGGTGGTCT+TGG + chr1_4:8178269-8178288 Msa0148000:CDS 45.0%
GTGGATGAGGGTGATTTACT+CGG + chr1_4:8178547-8178566 Msa0148000:CDS 45.0%
TACTAAAGATGCAGAGTGGC+TGG + chr1_4:8178583-8178602 Msa0148000:CDS 45.0%
!!! AGGTGACGGTTTTGATTACG+TGG + chr1_4:8178619-8178638 Msa0148000:CDS 45.0%
!!! GACGGTTTTGATTACGTGGA+AGG + chr1_4:8178623-8178642 Msa0148000:CDS 45.0%
ATGACGACCCTTGTAATGGT+TGG + chr1_4:8178663-8178682 Msa0148000:CDS 45.0%
TTGTGGGCCAACCATTACAA+GGG - chr1_4:8178673-8178692 None:intergenic 45.0%
ATTGTGGGCCAACCATTACA+AGG - chr1_4:8178674-8178693 None:intergenic 45.0%
TTCGAACCCATCGGAATTGT+GGG - chr1_4:8178689-8178708 None:intergenic 45.0%
CTGAAGAAGGAAGACAAACC+GGG - chr1_4:8178724-8178743 None:intergenic 45.0%
GCTGAAGAAGGAAGACAAAC+CGG - chr1_4:8178725-8178744 None:intergenic 45.0%
GTTTGTCTTCCTTCTTCAGC+TGG + chr1_4:8178725-8178744 Msa0148000:CDS 45.0%
! TTTTTATCCGTGCTCCGTTC+GGG + chr1_4:8178892-8178911 Msa0148000:intron 45.0%
!! GTTTTCTATGCCTGACTCGT+CGG - chr1_4:8179136-8179155 None:intergenic 45.0%
GTTGTACTTAGCAGCTTCCA+GGG - chr1_4:8179321-8179340 None:intergenic 45.0%
AGTTGTACTTAGCAGCTTCC+AGG - chr1_4:8179322-8179341 None:intergenic 45.0%
TTGGGGGAAAACTGACTACA+CGG + chr1_4:8179665-8179684 Msa0148000:intron 45.0%
GTGGATGAGGGTGATTTACT+CGG + chr1_4:8178547-8178566 Msa0148000:CDS 45.0%
TACTAAAGATGCAGAGTGGC+TGG + chr1_4:8178583-8178602 Msa0148000:CDS 45.0%
!!! AGGTGACGGTTTTGATTACG+TGG + chr1_4:8178619-8178638 Msa0148000:CDS 45.0%
!!! GACGGTTTTGATTACGTGGA+AGG + chr1_4:8178623-8178642 Msa0148000:CDS 45.0%
ATGACGACCCTTGTAATGGT+TGG + chr1_4:8178663-8178682 Msa0148000:CDS 45.0%
TTGTGGGCCAACCATTACAA+GGG - chr1_4:8178673-8178692 None:intergenic 45.0%
ATTGTGGGCCAACCATTACA+AGG - chr1_4:8178674-8178693 None:intergenic 45.0%
TTCGAACCCATCGGAATTGT+GGG - chr1_4:8178689-8178708 None:intergenic 45.0%
CTGAAGAAGGAAGACAAACC+GGG - chr1_4:8178724-8178743 None:intergenic 45.0%
GCTGAAGAAGGAAGACAAAC+CGG - chr1_4:8178725-8178744 None:intergenic 45.0%
GTTTGTCTTCCTTCTTCAGC+TGG + chr1_4:8178725-8178744 Msa0148000:CDS 45.0%
! TTTTTATCCGTGCTCCGTTC+GGG + chr1_4:8178892-8178911 Msa0148000:intron 45.0%
!! GTTTTCTATGCCTGACTCGT+CGG - chr1_4:8179136-8179155 None:intergenic 45.0%
GTTGTACTTAGCAGCTTCCA+GGG - chr1_4:8179321-8179340 None:intergenic 45.0%
AGTTGTACTTAGCAGCTTCC+AGG - chr1_4:8179322-8179341 None:intergenic 45.0%
TTGGGGGAAAACTGACTACA+CGG + chr1_4:8179665-8179684 Msa0148000:intron 45.0%
TTGGCCATTTACGGAACTGT+GGG - chr1_4:8181558-8181577 None:intergenic 45.0%
TTTGGCCATTTACGGAACTG+TGG - chr1_4:8181559-8181578 None:intergenic 45.0%
!! TGGAGGGTTGAGATTTGTTG+AGG + chr1_4:8181714-8181733 Msa0148000:CDS 45.0%
!! GGAGGGTTGAGATTTGTTGA+GGG + chr1_4:8181715-8181734 Msa0148000:CDS 45.0%
TTTGCTACGTGTAAAGCGTG+TGG + chr1_4:8181774-8181793 Msa0148000:CDS 45.0%
GAAGAGGATGCTAAAGCCAA+AGG + chr1_4:8181796-8181815 Msa0148000:CDS 45.0%
AGGTGCATCCCATATACCTT+TGG - chr1_4:8181815-8181834 None:intergenic 45.0%
AACATGTTCAACCATGGGTG+AGG - chr1_4:8181835-8181854 None:intergenic 45.0%
AGCAAGAGAGATATGGACCA+AGG + chr1_4:8182314-8182333 Msa0148000:intron 45.0%
GCAAGAGAGATATGGACCAA+GGG + chr1_4:8182315-8182334 Msa0148000:intron 45.0%
CAAGAGAGATATGGACCAAG+GGG + chr1_4:8182316-8182335 Msa0148000:intron 45.0%
TTGCAACCAAGGTCACAGTT+GGG - chr1_4:8182355-8182374 None:intergenic 45.0%
TTTGCAACCAAGGTCACAGT+TGG - chr1_4:8182356-8182375 None:intergenic 45.0%
GGTGGTCCTTGAAGCAAATT+AGG - chr1_4:8182414-8182433 None:intergenic 45.0%
! ACCACCAATTTTAAACGGGG+TGG + chr1_4:8182428-8182447 Msa0148000:intron 45.0%
! CCACCAATTTTAAACGGGGT+GGG + chr1_4:8182429-8182448 Msa0148000:intron 45.0%
TAAACGGGGTGGGTAAGATT+TGG + chr1_4:8182439-8182458 Msa0148000:intron 45.0%
GGTGAAGTGTATGGGAAATG+GGG - chr1_4:8182536-8182555 None:intergenic 45.0%
! TCAGCTGTTTCATCACACTG+CGG + chr1_4:8182578-8182597 Msa0148000:intron 45.0%
!!! GCTTCTTTTTGGTAGTGGTC+AGG + chr1_4:8182705-8182724 Msa0148000:intron 45.0%
TGAGCTTAGCTCAGTTGGTT+GGG - chr1_4:8182764-8182783 None:intergenic 45.0%
TAGGTTCCCAGTTGCCTTAT+TGG - chr1_4:8183125-8183144 None:intergenic 45.0%
TGGGAACCTACATTCCTTTC+CGG + chr1_4:8183135-8183154 Msa0148000:intron 45.0%
AACCTACATTCCTTTCCGGT+AGG + chr1_4:8183139-8183158 Msa0148000:intron 45.0%
!!! GAGCCACTTTTTTCTGTGCA+TGG + chr1_4:8183344-8183363 Msa0148000:intron 45.0%
GTGCCATGCACAGAAAAAAG+TGG - chr1_4:8183350-8183369 None:intergenic 45.0%
GGGAAGGAAATCCAGTAATC+AGG + chr1_4:8183438-8183457 Msa0148000:intron 45.0%
CAAAGAGATCAACGAGCTCA+CGG - chr1_4:8183486-8183505 None:intergenic 45.0%
!! AACCTGGTGTCACTGTAATC+CGG - chr1_4:8183680-8183699 None:intergenic 45.0%
CTGTGTATGTGGAACCACAA+GGG - chr1_4:8183756-8183775 None:intergenic 45.0%
CTTGTGGTTCCACATACACA+GGG + chr1_4:8183755-8183774 Msa0148000:intron 45.0%
! GGAATTTGGTTCCCTCTTCA+AGG + chr1_4:8183805-8183824 Msa0148000:intron 45.0%
GGTTTGAGTCGAGACATTGA+AGG - chr1_4:8184050-8184069 None:intergenic 45.0%
ATGTCTCGACTCAAACCACT+AGG + chr1_4:8184053-8184072 Msa0148000:intron 45.0%
TTATCAGTAGGTGGTCCCTT+AGG - chr1_4:8184571-8184590 None:intergenic 45.0%
GGGACCACCTACTGATAAAT+TGG + chr1_4:8184573-8184592 Msa0148000:CDS 45.0%
GCCACCAATTTATCAGTAGG+TGG - chr1_4:8184580-8184599 None:intergenic 45.0%
ACTACACGTCTCAGGAGAAT+TGG + chr1_4:8184665-8184684 Msa0148000:CDS 45.0%
GAGAATTGGATGCGACACTT+TGG + chr1_4:8184679-8184698 Msa0148000:CDS 45.0%
GAATTGGATGCGACACTTTG+GGG + chr1_4:8184681-8184700 Msa0148000:CDS 45.0%
! TGCGACACTTTGGGGATAAA+TGG + chr1_4:8184689-8184708 Msa0148000:CDS 45.0%
! CATTGGCTATTCTTGCACCT+GGG + chr1_4:8184746-8184765 Msa0148000:CDS 45.0%
!! ATATATTATAAAAGAAAATT+AGG + chr1_4:8179010-8179029 Msa0148000:intron 5.0%
!!! TTTTTTTTTTTAGAAAAAAT+TGG + chr1_4:8179372-8179391 Msa0148000:intron 5.0%
!! ATATATTATAAAAGAAAATT+AGG + chr1_4:8179010-8179029 Msa0148000:intron 5.0%
!!! TTTTTTTTTTTAGAAAAAAT+TGG + chr1_4:8179372-8179391 Msa0148000:intron 5.0%
!!! AATGATTTTATTAAAAAATT+GGG - chr1_4:8182975-8182994 None:intergenic 5.0%
!!! AAATGATTTTATTAAAAAAT+TGG - chr1_4:8182976-8182995 None:intergenic 5.0%
!!! TTAAAATCTTTTTTTTTTTT+AGG + chr1_4:8183416-8183435 Msa0148000:intron 5.0%
!!! TAAAATCTTTTTTTTTTTTA+GGG + chr1_4:8183417-8183436 Msa0148000:intron 5.0%
GATGAAACGTCGTCGTTTGG+TGG - chr1_4:8177723-8177742 None:intergenic 50.0%
CGATGGAATTAGGGGCGAAA+TGG - chr1_4:8177761-8177780 None:intergenic 50.0%
! TACGGCTTTTACCACATCGG+CGG - chr1_4:8177847-8177866 None:intergenic 50.0%
!!! GGTGGTTGCTGCTGCTTTTA+CGG - chr1_4:8177865-8177884 None:intergenic 50.0%
CGCCGCCACTGTTAAATTTG+TGG - chr1_4:8177886-8177905 None:intergenic 50.0%
! GGTAACGGTCACTCCATCAA+CGG + chr1_4:8177909-8177928 Msa0148000:CDS 50.0%
TTCTTCCCATAATGCCCCAC+CGG - chr1_4:8178036-8178055 None:intergenic 50.0%
! TTAAGCTTGTTCCGAGGTCG+TGG + chr1_4:8178081-8178100 Msa0148000:CDS 50.0%
AGATAATCCGTCCACGACCT+CGG - chr1_4:8178095-8178114 None:intergenic 50.0%
!! AGGTCGTGGACGGATTATCT+TGG + chr1_4:8178095-8178114 Msa0148000:CDS 50.0%
!! GGTCGTGGACGGATTATCTT+GGG + chr1_4:8178096-8178115 Msa0148000:CDS 50.0%
!! GGATTATCTTGGGTTGACGG+TGG + chr1_4:8178106-8178125 Msa0148000:CDS 50.0%
! TTATCTAACGCCGGTGTCAG+TGG + chr1_4:8178137-8178156 Msa0148000:CDS 50.0%
GAAAGTCTGACCACTGACAC+CGG - chr1_4:8178150-8178169 None:intergenic 50.0%
! TCCGTTACGTTTGCCGTTTG+AGG - chr1_4:8178182-8178201 None:intergenic 50.0%
! CTTGGTGGTCTTGGTCAGTT+TGG + chr1_4:8178278-8178297 Msa0148000:CDS 50.0%
GTGACACTACCAGAAGGTGA+CGG + chr1_4:8178605-8178624 Msa0148000:CDS 50.0%
TTACGTGGAAGGGTTCGTTG+TGG + chr1_4:8178634-8178653 Msa0148000:CDS 50.0%
GTTCGAACCCATCGGAATTG+TGG - chr1_4:8178690-8178709 None:intergenic 50.0%
TCTTCCTTCTTCAGCTGGAC+CGG + chr1_4:8178730-8178749 Msa0148000:CDS 50.0%
CAATAAACCCGAACGGAGCA+CGG - chr1_4:8178902-8178921 None:intergenic 50.0%
TGTAAAGGATCCGACGAGTC+AGG + chr1_4:8179123-8179142 Msa0148000:intron 50.0%
! GTCAGTTTTCCCCCAACCAT+TGG - chr1_4:8179661-8179680 None:intergenic 50.0%
TGAGATCTTGCTGGTGGTCT+TGG + chr1_4:8179900-8179919 Msa0148000:intron 50.0%
GTGACACTACCAGAAGGTGA+CGG + chr1_4:8178605-8178624 Msa0148000:CDS 50.0%
TTACGTGGAAGGGTTCGTTG+TGG + chr1_4:8178634-8178653 Msa0148000:CDS 50.0%
GTTCGAACCCATCGGAATTG+TGG - chr1_4:8178690-8178709 None:intergenic 50.0%
TCTTCCTTCTTCAGCTGGAC+CGG + chr1_4:8178730-8178749 Msa0148000:CDS 50.0%
CAATAAACCCGAACGGAGCA+CGG - chr1_4:8178902-8178921 None:intergenic 50.0%
TGTAAAGGATCCGACGAGTC+AGG + chr1_4:8179123-8179142 Msa0148000:intron 50.0%
! GTCAGTTTTCCCCCAACCAT+TGG - chr1_4:8179661-8179680 None:intergenic 50.0%
TGGCCATTTACGGAACTGTG+GGG - chr1_4:8181557-8181576 None:intergenic 50.0%
ACGTGTAAAGCGTGTGGAAG+AGG + chr1_4:8181780-8181799 Msa0148000:CDS 50.0%
ATCCTCAAACATGGGGTTGG+TGG + chr1_4:8181904-8181923 Msa0148000:CDS 50.0%
TCACAGTTGGGTGTTCCTAG+TGG - chr1_4:8182343-8182362 None:intergenic 50.0%
GTGAAAGAGGCAAATGGCTC+AGG - chr1_4:8182391-8182410 None:intergenic 50.0%
! CCCACCCCGTTTAAAATTGG+TGG - chr1_4:8182432-8182451 None:intergenic 50.0%
GTGGGTAAGATTTGGAGGGT+GGG + chr1_4:8182447-8182466 Msa0148000:intron 50.0%
! TGGGAAATGGGGTCCCATTT+TGG - chr1_4:8182525-8182544 None:intergenic 50.0%
GCAGTGTGATGAAACAGCTG+AGG - chr1_4:8182579-8182598 None:intergenic 50.0%
GTGAGCTTAGCTCAGTTGGT+TGG - chr1_4:8182765-8182784 None:intergenic 50.0%
CATCGTGAGCTTAGCTCAGT+TGG - chr1_4:8182769-8182788 None:intergenic 50.0%
TCACTATCACTCCTTGCCTG+TGG + chr1_4:8183095-8183114 Msa0148000:intron 50.0%
TATCACTCCTTGCCTGTGGT+TGG + chr1_4:8183099-8183118 Msa0148000:intron 50.0%
TTATTGGCCAACCACAGGCA+AGG - chr1_4:8183109-8183128 None:intergenic 50.0%
! TTGCCTGTGGTTGGCCAATA+AGG + chr1_4:8183108-8183127 Msa0148000:intron 50.0%
! TTGCCTTATTGGCCAACCAC+AGG - chr1_4:8183114-8183133 None:intergenic 50.0%
! TGGTTGGCCAATAAGGCAAC+TGG + chr1_4:8183115-8183134 Msa0148000:intron 50.0%
! GGTTGGCCAATAAGGCAACT+GGG + chr1_4:8183116-8183135 Msa0148000:intron 50.0%
GTCCTACCGGAAAGGAATGT+AGG - chr1_4:8183144-8183163 None:intergenic 50.0%
ATATGGCTGTCCTACCGGAA+AGG - chr1_4:8183152-8183171 None:intergenic 50.0%
CGTGAGCTCGTTGATCTCTT+TGG + chr1_4:8183484-8183503 Msa0148000:intron 50.0%
GAGCTCGTTGATCTCTTTGG+TGG + chr1_4:8183487-8183506 Msa0148000:intron 50.0%
!! TGGTGTCACTGTAATCCGGT+TGG - chr1_4:8183676-8183695 None:intergenic 50.0%
AACCGGATTACAGTGACACC+AGG + chr1_4:8183675-8183694 Msa0148000:intron 50.0%
CCTGTGTATGTGGAACCACA+AGG - chr1_4:8183757-8183776 None:intergenic 50.0%
CCTTGTGGTTCCACATACAC+AGG + chr1_4:8183754-8183773 Msa0148000:intron 50.0%
AGTTGCAGATTGGGCAAGGT+GGG - chr1_4:8183847-8183866 None:intergenic 50.0%
AACCAGTTGCAGATTGGGCA+AGG - chr1_4:8183851-8183870 None:intergenic 50.0%
GTGGGGGGAATTAATGCATG+AGG - chr1_4:8183900-8183919 None:intergenic 50.0%
ACCACTAGGTTACTCGATCG+AGG + chr1_4:8184067-8184086 Msa0148000:intron 50.0%
ACCTCGATCGAGTAACCTAG+TGG - chr1_4:8184071-8184090 None:intergenic 50.0%
CAGGTGGGATGATAGACACT+CGG + chr1_4:8184483-8184502 Msa0148000:intron 50.0%
GGATGATAGACACTCGGTAG+TGG + chr1_4:8184489-8184508 Msa0148000:CDS 50.0%
TCTTCCTCACTACACGTCTC+AGG + chr1_4:8184657-8184676 Msa0148000:CDS 50.0%
TTCTCCTGAGACGTGTAGTG+AGG - chr1_4:8184664-8184683 None:intergenic 50.0%
CCAGGTGCAAGAATAGCCAA+TGG - chr1_4:8184748-8184767 None:intergenic 50.0%
! CCATTGGCTATTCTTGCACC+TGG + chr1_4:8184745-8184764 Msa0148000:CDS 50.0%
AATTTAACAGTGGCGGCGCG+TGG + chr1_4:8177888-8177907 Msa0148000:CDS 55.0%
GACAAGTCCTTTCTCCGCCA+TGG - chr1_4:8177940-8177959 None:intergenic 55.0%
GTTCCACACGTCGACGTTTC+CGG + chr1_4:8178014-8178033 Msa0148000:CDS 55.0%
! ACGTTTCCGGTGGGGCATTA+TGG + chr1_4:8178027-8178046 Msa0148000:CDS 55.0%
! CGTTTCCGGTGGGGCATTAT+GGG + chr1_4:8178028-8178047 Msa0148000:CDS 55.0%
!! TATCTTGGGTTGACGGTGGG+TGG + chr1_4:8178110-8178129 Msa0148000:CDS 55.0%
TGGCTGGTGACACTACCAGA+AGG + chr1_4:8178599-8178618 Msa0148000:CDS 55.0%
! TGGTTGGCCCACAATTCCGA+TGG + chr1_4:8178679-8178698 Msa0148000:CDS 55.0%
! GGTTGGCCCACAATTCCGAT+GGG + chr1_4:8178680-8178699 Msa0148000:CDS 55.0%
AGAACCGGTCCAGCTGAAGA+AGG - chr1_4:8178737-8178756 None:intergenic 55.0%
! GCTGGTGGTCTTGGTCAGTT+TGG + chr1_4:8179909-8179928 Msa0148000:intron 55.0%
TGGCTGGTGACACTACCAGA+AGG + chr1_4:8178599-8178618 Msa0148000:CDS 55.0%
! TGGTTGGCCCACAATTCCGA+TGG + chr1_4:8178679-8178698 Msa0148000:CDS 55.0%
! GGTTGGCCCACAATTCCGAT+GGG + chr1_4:8178680-8178699 Msa0148000:CDS 55.0%
AGAACCGGTCCAGCTGAAGA+AGG - chr1_4:8178737-8178756 None:intergenic 55.0%
GGTCCCCACAGTTCCGTAAA+TGG + chr1_4:8181551-8181570 Msa0148000:intron 55.0%
TATGGGATGCACCTCACCCA+TGG + chr1_4:8181821-8181840 Msa0148000:CDS 55.0%
GACCACCAACCCCATGTTTG+AGG - chr1_4:8181909-8181928 None:intergenic 55.0%
TATGGACCAAGGGGTCCACT+AGG + chr1_4:8182325-8182344 Msa0148000:intron 55.0%
GGAACACCCAACTGTGACCT+TGG + chr1_4:8182346-8182365 Msa0148000:intron 55.0%
ACGGGGTGGGTAAGATTTGG+AGG + chr1_4:8182442-8182461 Msa0148000:intron 55.0%
CGGGGTGGGTAAGATTTGGA+GGG + chr1_4:8182443-8182462 Msa0148000:intron 55.0%
GGTGGGTAAGATTTGGAGGG+TGG + chr1_4:8182446-8182465 Msa0148000:intron 55.0%
TTGCAGATTGGGCAAGGTGG+GGG - chr1_4:8183845-8183864 None:intergenic 55.0%
GTTGCAGATTGGGCAAGGTG+GGG - chr1_4:8183846-8183865 None:intergenic 55.0%
CAGTTGCAGATTGGGCAAGG+TGG - chr1_4:8183848-8183867 None:intergenic 55.0%
CACCTTGCCCAATCTGCAAC+TGG + chr1_4:8183846-8183865 Msa0148000:intron 55.0%
TCAGTAGGTGGTCCCTTAGG+TGG - chr1_4:8184568-8184587 None:intergenic 55.0%
GGTGGTGTAAGGGCGGAGTA+CGG - chr1_4:8177826-8177845 None:intergenic 60.0%
CCACATCGGCGGTGGTGTAA+GGG - chr1_4:8177836-8177855 None:intergenic 60.0%
ACCACATCGGCGGTGGTGTA+AGG - chr1_4:8177837-8177856 None:intergenic 60.0%
! GGCTTTTACCACATCGGCGG+TGG - chr1_4:8177844-8177863 None:intergenic 60.0%
CTCCATCAACGGCCAAGCCA+TGG + chr1_4:8177920-8177939 Msa0148000:CDS 60.0%
CATCAACGGCCAAGCCATGG+CGG + chr1_4:8177923-8177942 Msa0148000:CDS 60.0%
GTCCTTTCTCCGCCATGGCT+TGG - chr1_4:8177935-8177954 None:intergenic 60.0%
TGTCCTCGACATGCGAGCCA+CGG + chr1_4:8177956-8177975 Msa0148000:CDS 60.0%
TTGAAAAGGCTCCTCCGCCG+TGG - chr1_4:8177976-8177995 None:intergenic 60.0%
CACACGTCGACGTTTCCGGT+GGG + chr1_4:8178018-8178037 Msa0148000:CDS 60.0%
ACACGTCGACGTTTCCGGTG+GGG + chr1_4:8178019-8178038 Msa0148000:CDS 60.0%
GCTTGTTCCGAGGTCGTGGA+CGG + chr1_4:8178085-8178104 Msa0148000:CDS 60.0%
! GGTGTTCCTAGTGGACCCCT+TGG - chr1_4:8182334-8182353 None:intergenic 60.0%
ATTGGGCAAGGTGGGGGAGA+GGG - chr1_4:8183839-8183858 None:intergenic 60.0%
GTAGGTGGTCCCTTAGGTGG+TGG - chr1_4:8184565-8184584 None:intergenic 60.0%
TAAGGGCGGAGTACGGCGAG+GGG - chr1_4:8177819-8177838 None:intergenic 65.0%
GTAAGGGCGGAGTACGGCGA+GGG - chr1_4:8177820-8177839 None:intergenic 65.0%
TGTAAGGGCGGAGTACGGCG+AGG - chr1_4:8177821-8177840 None:intergenic 65.0%
CATCGGCGGTGGTGTAAGGG+CGG - chr1_4:8177833-8177852 None:intergenic 65.0%
CCCTTACACCACCGCCGATG+TGG + chr1_4:8177833-8177852 Msa0148000:CDS 65.0%
ACAGTGGCGGCGCGTGGTAA+CGG + chr1_4:8177894-8177913 Msa0148000:CDS 65.0%
! CGCCATGGCTTGGCCGTTGA+TGG - chr1_4:8177925-8177944 None:intergenic 65.0%
! GGCCAAGCCATGGCGGAGAA+AGG + chr1_4:8177930-8177949 Msa0148000:CDS 65.0%
CCACCGGAAACGTCGACGTG+TGG - chr1_4:8178020-8178039 None:intergenic 65.0%
CCACACGTCGACGTTTCCGG+TGG + chr1_4:8178017-8178036 Msa0148000:CDS 65.0%
GGGGAGGGGACCCTTGAAGA+GGG - chr1_4:8183819-8183838 None:intergenic 65.0%
AGGGGAGGGGACCCTTGAAG+AGG - chr1_4:8183820-8183839 None:intergenic 65.0%
TTGGGCAAGGTGGGGGAGAG+GGG - chr1_4:8183838-8183857 None:intergenic 65.0%
GATTGGGCAAGGTGGGGGAG+AGG - chr1_4:8183840-8183859 None:intergenic 65.0%
! GGTGGTCCCTTAGGTGGTGG+TGG - chr1_4:8184562-8184581 None:intergenic 65.0%
GAGTACGGCGAGGGGAGTGG+AGG - chr1_4:8177811-8177830 None:intergenic 70.0%
CCTCGACATGCGAGCCACGG+CGG + chr1_4:8177959-8177978 Msa0148000:CDS 70.0%
CAAGGTGGGGGAGAGGGGAG+GGG - chr1_4:8183833-8183852 None:intergenic 70.0%
GCAAGGTGGGGGAGAGGGGA+GGG - chr1_4:8183834-8183853 None:intergenic 70.0%
GCGGAGTACGGCGAGGGGAG+TGG - chr1_4:8177814-8177833 None:intergenic 75.0%
CCGCCGTGGCTCGCATGTCG+AGG - chr1_4:8177962-8177981 None:intergenic 75.0%
CGACATGCGAGCCACGGCGG+AGG + chr1_4:8177962-8177981 Msa0148000:CDS 75.0%
GGCAAGGTGGGGGAGAGGGG+AGG - chr1_4:8183835-8183854 None:intergenic 75.0%
Chromosome Type Strat End Strand Name
chr1_4 gene 8177560 8185016 8177560 ID=Msa0148000;Name=Msa0148000
chr1_4 mRNA 8177560 8185016 8177560 ID=Msa0148000-mRNA-1;Parent=Msa0148000;Name=Msa0148000-mRNA-1;_AED=0.07;_eAED=0.07;_QI=112|0.8|0.83|1|1|1|6|215|618
chr1_4 exon 8177560 8178346 8177560 ID=Msa0148000-mRNA-1:exon:3497;Parent=Msa0148000-mRNA-1
chr1_4 exon 8178542 8178817 8178542 ID=Msa0148000-mRNA-1:exon:3498;Parent=Msa0148000-mRNA-1
chr1_4 exon 8179927 8179977 8179927 ID=Msa0148000-mRNA-1:exon:3499;Parent=Msa0148000-mRNA-1
chr1_4 exon 8180173 8180448 8180173 ID=Msa0148000-mRNA-1:exon:3500;Parent=Msa0148000-mRNA-1
chr1_4 exon 8181697 8181959 8181697 ID=Msa0148000-mRNA-1:exon:3501;Parent=Msa0148000-mRNA-1
chr1_4 exon 8184486 8185016 8184486 ID=Msa0148000-mRNA-1:exon:3502;Parent=Msa0148000-mRNA-1
chr1_4 five_prime_UTR 8177560 8177671 8177560 ID=Msa0148000-mRNA-1:five_prime_utr;Parent=Msa0148000-mRNA-1
chr1_4 CDS 8177672 8178346 8177672 ID=Msa0148000-mRNA-1:cds;Parent=Msa0148000-mRNA-1
chr1_4 CDS 8178542 8178817 8178542 ID=Msa0148000-mRNA-1:cds;Parent=Msa0148000-mRNA-1
chr1_4 CDS 8179927 8179977 8179927 ID=Msa0148000-mRNA-1:cds;Parent=Msa0148000-mRNA-1
chr1_4 CDS 8180173 8180448 8180173 ID=Msa0148000-mRNA-1:cds;Parent=Msa0148000-mRNA-1
chr1_4 CDS 8181697 8181959 8181697 ID=Msa0148000-mRNA-1:cds;Parent=Msa0148000-mRNA-1
chr1_4 CDS 8184486 8184801 8184486 ID=Msa0148000-mRNA-1:cds;Parent=Msa0148000-mRNA-1
chr1_4 three_prime_UTR 8184802 8185016 8184802 ID=Msa0148000-mRNA-1:three_prime_utr;Parent=Msa0148000-mRNA-1
Gene Sequence

>Msa0148000

ATGATAGCTTACCTTGAACACTTCGTTCATGGAAACGACACAGAATCACCACCAAACGACGACGTTTCATCTCTCCAATCTTCTTTCCATTTCGCCCCTAATTCCATCGCTAGTAAAGACTTTGGCGGCATGAAATCCTCCACTCCCCTCGCCGTACTCCGCCCTTACACCACCGCCGATGTGGTAAAAGCCGTAAAAGCAGCAGCAACCACCACAAATTTAACAGTGGCGGCGCGTGGTAACGGTCACTCCATCAACGGCCAAGCCATGGCGGAGAAAGGACTTGTCCTCGACATGCGAGCCACGGCGGAGGAGCCTTTTCAACTTCTCTACGTCGACGGTGTTCCACACGTCGACGTTTCCGGTGGGGCATTATGGGAAGAAGTGTTGAAACGCTGCGTTTCGAATTTTAAGCTTGTTCCGAGGTCGTGGACGGATTATCTTGGGTTGACGGTGGGTGGAACTTTATCTAACGCCGGTGTCAGTGGTCAGACTTTCCGTTATGGTCCTCAAACGGCAAACGTAACGGAATTGGAAGTTGTTACTGGTAAAGGTGATAGTTTTGTTTGTAATGAAAATCAAAATTCTGAGCTCTTTTTTGCTTCACTTGGTGGTCTTGGTCAGTTTGGTGTCATCACTAGAGCCAGAATCGTTCTTCAACAAGCTCCTGATATGGTGAGGTGGATGAGGGTGATTTACTCGGAATTTGAGGACTATACTAAAGATGCAGAGTGGCTGGTGACACTACCAGAAGGTGACGGTTTTGATTACGTGGAAGGGTTCGTTGTGGCTAACAATGACGACCCTTGTAATGGTTGGCCCACAATTCCGATGGGTTCGAACCAAATTTTCAACCCGGTTTGTCTTCCTTCTTCAGCTGGACCGGTTCTCTATTGCTTAGAGCTTGCTCTTCATTATCGTAAAACCGCTCGATCTTCTGAAGTTAATACGTTTGGTGTCATCACTAGAGCCAGAATCGTTCTTCAACAAGCTCCTGATATGGTGAGGTGGATGAGGGTGATTTACTCGGAATTTGAGGACTATACTAAAGATGCAGAGTGGCTGGTGACACTACCAGAAGGTGACGGTTTTGATTACGTGGAAGGGTTCGTTGTGGCTAACAATGACGACCCTTGTAATGGTTGGCCCACAATTCCGATGGGTTCGAACCAAATTTTCAACCCGGTTTGTCTTCCTTCTTCAGCTGGACCGGTTCTCTATTGCTTAGAGCTTGCTCTTCATTATCGTAAAACCGCTCGATCTTCTGAAGTTAATACGAAAGTGGATAGATTGCTTGGAGGGTTGAGATTTGTTGAGGGAATAAAATTTGAGGATGATGTGAAGTACATGGATTTTTTGCTACGTGTAAAGCGTGTGGAAGAGGATGCTAAAGCCAAAGGTATATGGGATGCACCTCACCCATGGTTGAACATGTTTGTGTCCAAGACCGACATTGCTGATTTTGATCGTGAAGTGTTCAAGAAAATCCTCAAACATGGGGTTGGTGGTCCCATTCTAGTGTACCCACTATTGCGAAGCAAGTGGGATGATAGACACTCGGTAGTGGTGCCAGACAGCAACATTTTCTACATAATAGCATTACTCCGATTTATTCCACCACCACCTAAGGGACCACCTACTGATAAATTGGTGGCACAAAACAATGCAATTATTCAATTGTGCTACAACAAGGGATTTGATTTCAAGTTATATCTTCCTCACTACACGTCTCAGGAGAATTGGATGCGACACTTTGGGGATAAATGGACTAGATTTGTCCAGAGAAAACAAAATTTTGATCCATTGGCTATTCTTGCACCTGGGCAAAAAATATTTTCCAGAAACCAACTTAAATAA
Protein sequence

>Msa0148000

MIAYLEHFVHGNDTESPPNDDVSSLQSSFHFAPNSIASKDFGGMKSSTPLAVLRPYTTADVVKAVKAAATTTNLTVAARGNGHSINGQAMAEKGLVLDMRATAEEPFQLLYVDGVPHVDVSGGALWEEVLKRCVSNFKLVPRSWTDYLGLTVGGTLSNAGVSGQTFRYGPQTANVTELEVVTGKGDSFVCNENQNSELFFASLGGLGQFGVITRARIVLQQAPDMVRWMRVIYSEFEDYTKDAEWLVTLPEGDGFDYVEGFVVANNDDPCNGWPTIPMGSNQIFNPVCLPSSAGPVLYCLELALHYRKTARSSEVNTFGVITRARIVLQQAPDMVRWMRVIYSEFEDYTKDAEWLVTLPEGDGFDYVEGFVVANNDDPCNGWPTIPMGSNQIFNPVCLPSSAGPVLYCLELALHYRKTARSSEVNTKVDRLLGGLRFVEGIKFEDDVKYMDFLLRVKRVEEDAKAKGIWDAPHPWLNMFVSKTDIADFDREVFKKILKHGVGGPILVYPLLRSKWDDRHSVVVPDSNIFYIIALLRFIPPPPKGPPTDKLVAQNNAIIQLCYNKGFDFKLYLPHYTSQENWMRHFGDKWTRFVQRKQNFDPLAILAPGQKIFSRNQLK*