AlfalfaGEDB Alfalfa Gene Editing Database

M. sativa cultivar zhongmu-4 / Msa1453910


Find 269 sgRNAs with CRISPR-Local

Find 1032 sgRNAs with CRISPR-GE


CRISPR-Local

CRISPR-GE

Chromosome Type Strat End Strand Name
tig0034931 gene 5303 21522 5303 ID=Msa1453910;Name=Msa1453910
tig0034931 mRNA 5303 21522 5303 ID=Msa1453910-mRNA-1;Parent=Msa1453910;Name=Msa1453910-mRNA-1;_AED=0.15;_eAED=0.15;_QI=120|0.96|1|1|1|1|30|642|1056
tig0034931 exon 5303 5986 5303 ID=Msa1453910-mRNA-1:exon:19409;Parent=Msa1453910-mRNA-1
tig0034931 exon 6140 6226 6140 ID=Msa1453910-mRNA-1:exon:19408;Parent=Msa1453910-mRNA-1
tig0034931 exon 6348 6422 6348 ID=Msa1453910-mRNA-1:exon:19407;Parent=Msa1453910-mRNA-1
tig0034931 exon 6572 6688 6572 ID=Msa1453910-mRNA-1:exon:19406;Parent=Msa1453910-mRNA-1
tig0034931 exon 6790 6876 6790 ID=Msa1453910-mRNA-1:exon:19405;Parent=Msa1453910-mRNA-1
tig0034931 exon 7044 7109 7044 ID=Msa1453910-mRNA-1:exon:19404;Parent=Msa1453910-mRNA-1
tig0034931 exon 7312 7377 7312 ID=Msa1453910-mRNA-1:exon:19403;Parent=Msa1453910-mRNA-1
tig0034931 exon 7650 7721 7650 ID=Msa1453910-mRNA-1:exon:19402;Parent=Msa1453910-mRNA-1
tig0034931 exon 7891 7992 7891 ID=Msa1453910-mRNA-1:exon:19401;Parent=Msa1453910-mRNA-1
tig0034931 exon 8074 8251 8074 ID=Msa1453910-mRNA-1:exon:19400;Parent=Msa1453910-mRNA-1
tig0034931 exon 8354 8409 8354 ID=Msa1453910-mRNA-1:exon:19399;Parent=Msa1453910-mRNA-1
tig0034931 exon 8651 8761 8651 ID=Msa1453910-mRNA-1:exon:19398;Parent=Msa1453910-mRNA-1
tig0034931 exon 8842 8910 8842 ID=Msa1453910-mRNA-1:exon:19397;Parent=Msa1453910-mRNA-1
tig0034931 exon 9234 9342 9234 ID=Msa1453910-mRNA-1:exon:19396;Parent=Msa1453910-mRNA-1
tig0034931 exon 9427 9515 9427 ID=Msa1453910-mRNA-1:exon:19395;Parent=Msa1453910-mRNA-1
tig0034931 exon 9607 9684 9607 ID=Msa1453910-mRNA-1:exon:19394;Parent=Msa1453910-mRNA-1
tig0034931 exon 10184 10306 10184 ID=Msa1453910-mRNA-1:exon:19393;Parent=Msa1453910-mRNA-1
tig0034931 exon 12142 12288 12142 ID=Msa1453910-mRNA-1:exon:19392;Parent=Msa1453910-mRNA-1
tig0034931 exon 12385 12463 12385 ID=Msa1453910-mRNA-1:exon:19391;Parent=Msa1453910-mRNA-1
tig0034931 exon 13725 13799 13725 ID=Msa1453910-mRNA-1:exon:19390;Parent=Msa1453910-mRNA-1
tig0034931 exon 14387 14496 14387 ID=Msa1453910-mRNA-1:exon:19389;Parent=Msa1453910-mRNA-1
tig0034931 exon 15206 15304 15206 ID=Msa1453910-mRNA-1:exon:19388;Parent=Msa1453910-mRNA-1
tig0034931 exon 16985 17100 16985 ID=Msa1453910-mRNA-1:exon:19387;Parent=Msa1453910-mRNA-1
tig0034931 exon 17243 17351 17243 ID=Msa1453910-mRNA-1:exon:19386;Parent=Msa1453910-mRNA-1
tig0034931 exon 17437 17655 17437 ID=Msa1453910-mRNA-1:exon:19385;Parent=Msa1453910-mRNA-1
tig0034931 exon 17751 18016 17751 ID=Msa1453910-mRNA-1:exon:19384;Parent=Msa1453910-mRNA-1
tig0034931 exon 18734 18891 18734 ID=Msa1453910-mRNA-1:exon:19383;Parent=Msa1453910-mRNA-1
tig0034931 exon 19095 19239 19095 ID=Msa1453910-mRNA-1:exon:19382;Parent=Msa1453910-mRNA-1
tig0034931 exon 20919 21009 20919 ID=Msa1453910-mRNA-1:exon:19381;Parent=Msa1453910-mRNA-1
tig0034931 exon 21373 21522 21373 ID=Msa1453910-mRNA-1:exon:19380;Parent=Msa1453910-mRNA-1
tig0034931 five_prime_UTR 21403 21522 21403 ID=Msa1453910-mRNA-1:five_prime_utr;Parent=Msa1453910-mRNA-1
tig0034931 CDS 21373 21402 21373 ID=Msa1453910-mRNA-1:cds;Parent=Msa1453910-mRNA-1
tig0034931 CDS 20919 21009 20919 ID=Msa1453910-mRNA-1:cds;Parent=Msa1453910-mRNA-1
tig0034931 CDS 19095 19239 19095 ID=Msa1453910-mRNA-1:cds;Parent=Msa1453910-mRNA-1
tig0034931 CDS 18734 18891 18734 ID=Msa1453910-mRNA-1:cds;Parent=Msa1453910-mRNA-1
tig0034931 CDS 17751 18016 17751 ID=Msa1453910-mRNA-1:cds;Parent=Msa1453910-mRNA-1
tig0034931 CDS 17437 17655 17437 ID=Msa1453910-mRNA-1:cds;Parent=Msa1453910-mRNA-1
tig0034931 CDS 17243 17351 17243 ID=Msa1453910-mRNA-1:cds;Parent=Msa1453910-mRNA-1
tig0034931 CDS 16985 17100 16985 ID=Msa1453910-mRNA-1:cds;Parent=Msa1453910-mRNA-1
tig0034931 CDS 15206 15304 15206 ID=Msa1453910-mRNA-1:cds;Parent=Msa1453910-mRNA-1
tig0034931 CDS 14387 14496 14387 ID=Msa1453910-mRNA-1:cds;Parent=Msa1453910-mRNA-1
tig0034931 CDS 13725 13799 13725 ID=Msa1453910-mRNA-1:cds;Parent=Msa1453910-mRNA-1
tig0034931 CDS 12385 12463 12385 ID=Msa1453910-mRNA-1:cds;Parent=Msa1453910-mRNA-1
tig0034931 CDS 12142 12288 12142 ID=Msa1453910-mRNA-1:cds;Parent=Msa1453910-mRNA-1
tig0034931 CDS 10184 10306 10184 ID=Msa1453910-mRNA-1:cds;Parent=Msa1453910-mRNA-1
tig0034931 CDS 9607 9684 9607 ID=Msa1453910-mRNA-1:cds;Parent=Msa1453910-mRNA-1
tig0034931 CDS 9427 9515 9427 ID=Msa1453910-mRNA-1:cds;Parent=Msa1453910-mRNA-1
tig0034931 CDS 9234 9342 9234 ID=Msa1453910-mRNA-1:cds;Parent=Msa1453910-mRNA-1
tig0034931 CDS 8842 8910 8842 ID=Msa1453910-mRNA-1:cds;Parent=Msa1453910-mRNA-1
tig0034931 CDS 8651 8761 8651 ID=Msa1453910-mRNA-1:cds;Parent=Msa1453910-mRNA-1
tig0034931 CDS 8354 8409 8354 ID=Msa1453910-mRNA-1:cds;Parent=Msa1453910-mRNA-1
tig0034931 CDS 8074 8251 8074 ID=Msa1453910-mRNA-1:cds;Parent=Msa1453910-mRNA-1
tig0034931 CDS 7891 7992 7891 ID=Msa1453910-mRNA-1:cds;Parent=Msa1453910-mRNA-1
tig0034931 CDS 7650 7721 7650 ID=Msa1453910-mRNA-1:cds;Parent=Msa1453910-mRNA-1
tig0034931 CDS 7312 7377 7312 ID=Msa1453910-mRNA-1:cds;Parent=Msa1453910-mRNA-1
tig0034931 CDS 7044 7109 7044 ID=Msa1453910-mRNA-1:cds;Parent=Msa1453910-mRNA-1
tig0034931 CDS 6790 6876 6790 ID=Msa1453910-mRNA-1:cds;Parent=Msa1453910-mRNA-1
tig0034931 CDS 6572 6688 6572 ID=Msa1453910-mRNA-1:cds;Parent=Msa1453910-mRNA-1
tig0034931 CDS 6348 6422 6348 ID=Msa1453910-mRNA-1:cds;Parent=Msa1453910-mRNA-1
tig0034931 CDS 6140 6226 6140 ID=Msa1453910-mRNA-1:cds;Parent=Msa1453910-mRNA-1
tig0034931 CDS 5945 5986 5945 ID=Msa1453910-mRNA-1:cds;Parent=Msa1453910-mRNA-1
tig0034931 three_prime_UTR 5303 5944 5303 ID=Msa1453910-mRNA-1:three_prime_utr;Parent=Msa1453910-mRNA-1
Gene Sequence

>Msa1453910

ATGACCATCATGACTCCTGCTCCGATTGATCAACAACAGCAGGAGGATGAAGAGATGCTTGTGTCGCACGCGGTTCCGCATGCGGATTTGGCTGAGAACAATAATCATCAACCAATGGATGTGGTTGCTCAACCTGAAACCGCCAACACTGTGGAGCCTGTTGAGGATCCTTCACCATCAAGATTCACATGGAGAATTGACAACTTTTCTAGGGTGAATTTGAAAAAGCTCTATTCAGATGTATTTGTTGTTGGGAGTTACAAATGGCGTGTACTTATTTTTCCAAAAGGGAACAATGTGGACTATTTGTCCATGTATTTGGATGTTGCAGATTCAACTAGTCTGCCCTACGGTTGGAGTAGATATGCACAGTTTAGCTTGGCTGTTGTTAATCAGATCCATAATAAGTACACTGTGAGAAAAGATACGCAGCATCAGTTCAATGCACGGGAAAGTGACTGGGGTTTCACATCCTTCATGCCTCTTGGTGAATTGTATGATCCTAGTAGAGGGTATCTTATGAATGATACTCTTATAATTGAAGCCGAGGTCCTTGTCCGTAGGATTGTTGATTACTGGACATATGATTCAAAAAAGGAGACTGGATATGTTGGGCTTAAGAACCAGGGAGCTACATGCTATATGAATTCTCTGCTTCAAACTCTGTATCATATTCCTTATTTCCGAAAGGCTGTATACCACATGCCTACAACAGAGAATGATATGCCCTCTGGAAGCATCCCCCTGGCTCTGCAAAGTTTGTTCTACAAGCTCCAGTATAGTGACACCAGTGTTGCAACAAAAGAGCTGACAAAATCTTTTGGATGGGATACATATGATTCTTTCTTGCAGCATGATGTTCAAGAACTAAATAGAGTCCTTTGTGAAAAACTTGAAGACAAAATGAAGGCAACTGTCGTTGAGGGAACTATACAGAAATTGTTTGAAGGGCACCATATGAACTACATCGAGTGCATCAATGTGGACTATAAATCAACACGAAAGGAGTCATTTTATGATCTTCAACTTGATGTCAAAGGTTGTCCTGATGTTTATGCTTCCTTTGACAAGTATGTTGAAGTTGAACGTCTTGAGGGGGACAACAAATACCATGCTGAACAATATGGTTTGCAGGATGCTAAGAAAGGTGTCCTGTTCATCGATTTTCCTCCGGTCTTGCAGCTTCAGCTGAAAAGATTTGAATATGACTTTATGCGGGATACTATGGTAAAGATTAATGATCGTTATGAGTTTCCATTGCAACTTGATCTTGATCGTGACAATGGAAAATATCTATCACCTGATGCTGATAGGAATGTCCGCAATCTTTACACACTTCATAGCGTTCTGGTTCACAGTGGTGGTGTGCATGGTGGACATTACTATGCTTTTATCAGGCCGACTCTCTCTGATCAGTGGTACAAATTTGATGATGAGAGGGTGACAAAAGAAGACCCTAAACGGGCAATGGAGGAGCAATATGGTGGTGAGGAAGAGTTACCACAGACAAATCCCGGATTCAATAACACTCCTTTTAAATTCACCAAATATTCAAATGCTTACATGCTGGTGTATATACGTGAAGCGGACAAGGAAAAAGTAATATGCAATGTGGACGAGAAAGATATTGCTGAGCATTTAAGGGAAGAGGTTGCTAAAGAGTTCGGCATACCTGTACAATTCCAGCGCTTTTGGCTTTGGGCAAAGCGTCAAAACCATACATATCGTCCTAATCGGCCATTGACACAAATTGAGGAAGCACAATCCGTTGGACAATTGAGAGAGATATCGAACAAGGTTCACAATGCAGAATTAAAATTGTTTTTGGAAGTGGAGCGTGGACCGGATTTATGTCCCATTGCACCACCTGAGAAGACAAAGGATGATATATTACTTTTTTTCAAGTTATATGATCCTGAGAAAGAGGAGCTACGTTATGTTGGCAGACTCTTTGTGAACAACACTGGTAAACCATCAGAAATCTTAGCAAGGTTAAATAAAATGGCTGGTTATGATCCTGAAGAAGAGATTGGACTTTATGAGGAAATTAAGTTTGAACCAAACGTGATGTGTGAGCCTATTGACAAGAAATTAACATTTCGAGCAAGCCAGCTTGAAGATGGAGATATTATATGCTTTCAGAAGGCTCCTGCTACGGATAATGAGGAGCATATCCGCTATCCTGATGTGCCTTCTTACTTGGAATATGTGCACAATCGCCAGGTTGTTCACTTTCGGTCCCTAGATAAACCAAAGGAAGATGACTTCTGCCTGGAGATGTCAAGGCTTTTCACATATGATGATGTTGTGGAGAGAGTAGCTGAACAACTTGGTTTGGACGACCCATCCAAAATCAGGCTCACCCCACACAACTGCTATTCTCAACAACCAAAACCCCAGCCTATCAAGTACCGAGGGGTGGAACATTTATCTGATATGCTCGTTCACTACAATCAGACATCCGACATATTGTACTATGAAGTACTTGACATCCCTCTGCCAGAATTACAAGGTTTGAAAACTCTGAAAGTTGCGTTTCATCATGCTACCAAGGATGAAGCGGTTATCCACACCATCAGACTCCCAAAGCAAAGCACTGTAGGAGATGTCCTTGAGGATCTTAAAAAGAAGGTTGAATTGTCTCGTCCTGATACTGAGCTTAGGTTGCTTGAAGTCTTTTATCACAAGATATACAAGGTTTTCCCTCCCAATGAAAAGATTGAAAACATAAATGATCAATACTGGACACTACGAGCCGAGGAGATACCAGAAGAAGAGAAAAATCTCGGTCCCCATGATCGTCTAATCCACGTGTATCATTTTACTAAAGACACTACTCAGAACCAAATGCAAATTCAGAATTTTGGGGAACCTTTTTTCTTGGTCATACACGAATGTGAGACTTTGGCTGAAATTAGATTGCGAATACAGAAGAAGCTTCAAGTTCCAGACGATGAGTTTGTCAAGTGGAAATTTGCTTTTTTCTCATTAGGGCGTCCTGAGTACCTTGAGGACTCTGAAGTTGTATCAAATCGTTTTCAGAGAAGAGACGTATATGGTGCCTGGGAGCAGTATCTTGGCTTGGAGCATACTGATAATGCTCCTAAAAGATCATATGCTGCTAATCAGAATCGTCACACATTTGAGAAGCCAGTAAAGATTTATAATTAG

Protein sequence

>Msa1453910

MTIMTPAPIDQQQQEDEEMLVSHAVPHADLAENNNHQPMDVVAQPETANTVEPVEDPSPSRFTWRIDNFSRVNLKKLYSDVFVVGSYKWRVLIFPKGNNVDYLSMYLDVADSTSLPYGWSRYAQFSLAVVNQIHNKYTVRKDTQHQFNARESDWGFTSFMPLGELYDPSRGYLMNDTLIIEAEVLVRRIVDYWTYDSKKETGYVGLKNQGATCYMNSLLQTLYHIPYFRKAVYHMPTTENDMPSGSIPLALQSLFYKLQYSDTSVATKELTKSFGWDTYDSFLQHDVQELNRVLCEKLEDKMKATVVEGTIQKLFEGHHMNYIECINVDYKSTRKESFYDLQLDVKGCPDVYASFDKYVEVERLEGDNKYHAEQYGLQDAKKGVLFIDFPPVLQLQLKRFEYDFMRDTMVKINDRYEFPLQLDLDRDNGKYLSPDADRNVRNLYTLHSVLVHSGGVHGGHYYAFIRPTLSDQWYKFDDERVTKEDPKRAMEEQYGGEEELPQTNPGFNNTPFKFTKYSNAYMLVYIREADKEKVICNVDEKDIAEHLREEVAKEFGIPVQFQRFWLWAKRQNHTYRPNRPLTQIEEAQSVGQLREISNKVHNAELKLFLEVERGPDLCPIAPPEKTKDDILLFFKLYDPEKEELRYVGRLFVNNTGKPSEILARLNKMAGYDPEEEIGLYEEIKFEPNVMCEPIDKKLTFRASQLEDGDIICFQKAPATDNEEHIRYPDVPSYLEYVHNRQVVHFRSLDKPKEDDFCLEMSRLFTYDDVVERVAEQLGLDDPSKIRLTPHNCYSQQPKPQPIKYRGVEHLSDMLVHYNQTSDILYYEVLDIPLPELQGLKTLKVAFHHATKDEAVIHTIRLPKQSTVGDVLEDLKKKVELSRPDTELRLLEVFYHKIYKVFPPNEKIENINDQYWTLRAEEIPEEEKNLGPHDRLIHVYHFTKDTTQNQMQIQNFGEPFFLVIHECETLAEIRLRIQKKLQVPDDEFVKWKFAFFSLGRPEYLEDSEVVSNRFQRRDVYGAWEQYLGLEHTDNAPKRSYAANQNRHTFEKPVKIYN*