Alfalfa Gene Editing Database
Alfalfa Gene Editing Database
| Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa0863970 | XP_039690834.1 | 90.158 | 569 | 32 | 3 | 1 | 550 | 1 | 564 | 0.0 | 979 |
| Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|
| Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa0863970 | G7K4J5 | 90.158 | 569 | 32 | 3 | 1 | 550 | 1 | 564 | 0.0 | 979 |
| Gene ID | Type | Classification |
|---|
| Gene ID | Type | Classification |
|---|
Co-expression Network
| Gene1 | Gene2 | correlation coefficient | p_value | FDR |
|---|---|---|---|---|
| Msa0024680 | Msa0863970 | 0.804891 | 1.737572e-49 | -8.615850e-47 |
| Msa0032840 | Msa0863970 | -0.804494 | 2.103106e-49 | -8.615850e-47 |
| Msa0044020 | Msa0863970 | 0.802479 | 5.501423e-49 | -8.615850e-47 |
| Msa0073670 | Msa0863970 | 0.808266 | 3.369677e-50 | -8.615850e-47 |
| Msa0096670 | Msa0863970 | 0.806929 | 6.479989e-50 | -8.615850e-47 |
| Msa0639120 | Msa0863970 | 0.806567 | 7.725610e-50 | -8.615850e-47 |
| Msa0678860 | Msa0863970 | 0.801336 | 9.447113e-49 | -8.615850e-47 |
| Msa0740040 | Msa0863970 | 0.982521 | 2.624298e-155 | -8.615850e-47 |
| Msa0787750 | Msa0863970 | 0.801380 | 9.255609e-49 | -8.615850e-47 |
| Msa0787810 | Msa0863970 | 0.891760 | 2.958273e-74 | -8.615850e-47 |
| Msa0810020 | Msa0863970 | 0.801074 | 1.068809e-48 | -8.615850e-47 |
| Msa0824910 | Msa0863970 | 0.918098 | 2.366669e-86 | -8.615850e-47 |
| Msa0134130 | Msa0863970 | 0.805770 | 1.136882e-49 | -8.615850e-47 |
| Msa0169570 | Msa0863970 | 0.811528 | 6.693370e-51 | -8.615850e-47 |
| Msa0230550 | Msa0863970 | -0.803278 | 3.761727e-49 | -8.615850e-47 |
| Msa0413450 | Msa0863970 | 0.812712 | 3.693770e-51 | -8.615850e-47 |
| Msa0469910 | Msa0863970 | -0.809317 | 2.008682e-50 | -8.615850e-47 |
| Msa0259560 | Msa0863970 | 0.819240 | 1.288516e-52 | -8.615850e-47 |
| Msa0294390 | Msa0863970 | 0.800783 | 1.225654e-48 | -8.615850e-47 |
| Msa0510440 | Msa0863970 | 0.800280 | 1.551694e-48 | -8.615850e-47 |
| Msa0527590 | Msa0863970 | 0.805311 | 1.419138e-49 | -8.615850e-47 |
| Msa0863970 | Msa0864010 | 0.804835 | 1.785309e-49 | -8.615850e-47 |
| Msa0863970 | Msa0872310 | 0.802464 | 5.541743e-49 | -8.615850e-47 |
| Msa0863970 | Msa0905550 | 0.809865 | 1.531836e-50 | -8.615850e-47 |
| Msa0863970 | Msa0937550 | 0.827231 | 1.753369e-54 | -8.615850e-47 |
| Msa0863970 | Msa1007350 | 0.815275 | 1.004881e-51 | -8.615850e-47 |
| Msa0863970 | Msa1018790 | 0.808326 | 3.271536e-50 | -8.615850e-47 |
| Msa0863970 | Msa1044340 | 0.800132 | 1.663505e-48 | -8.615850e-47 |
| Msa0863970 | Msa1082700 | 0.813776 | 2.156782e-51 | -8.615850e-47 |
| Msa0863970 | Msa1150970 | 0.818523 | 1.875196e-52 | -8.615850e-47 |
| Msa0863970 | Msa1221560 | 0.813539 | 2.431369e-51 | -8.615850e-47 |
| Msa0863970 | Msa1307950 | 0.814398 | 1.572591e-51 | -8.615850e-47 |
| Msa0863970 | Msa1365150 | 0.821578 | 3.747343e-53 | -8.615850e-47 |
| Msa0863970 | Msa1365200 | 0.816682 | 4.875746e-52 | -8.615850e-47 |
| Msa0863970 | Msa1367880 | 0.808476 | 3.040471e-50 | -8.615850e-47 |
| Msa0863970 | Msa1404190 | 0.809109 | 2.225464e-50 | -8.615850e-47 |
| Msa0863970 | Msa1466990 | 0.805444 | 1.330843e-49 | -8.615850e-47 |
PPI
| Gene1 | Gene2 | Type |
|---|
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa0863970 | MtrunA17_Chr5g0445961 | 90.158 | 569 | 32 | 3 | 1 | 550 | 1 | 564 | 0.0 | 979 |
| Msa0863970 | MtrunA17_Chr5g0445861 | 52.792 | 394 | 145 | 9 | 1 | 386 | 1 | 361 | 6.90e-97 | 301 |
| Msa0863970 | MtrunA17_Chr5g0445831 | 36.790 | 405 | 176 | 12 | 1 | 376 | 1 | 354 | 5.73e-46 | 167 |
| Msa0863970 | MtrunA17_Chr5g0445771 | 35.222 | 406 | 151 | 9 | 3 | 398 | 1 | 304 | 1.02e-45 | 168 |
| Msa0863970 | MtrunA17_Chr5g0445881 | 36.476 | 403 | 151 | 11 | 1 | 400 | 1 | 301 | 4.00e-44 | 163 |
| Msa0863970 | MtrunA17_Chr5g0446181 | 41.150 | 226 | 106 | 6 | 1 | 216 | 1 | 209 | 3.60e-28 | 115 |
| Msa0863970 | MtrunA17_Chr5g0445811 | 36.290 | 248 | 99 | 7 | 154 | 376 | 30 | 243 | 4.08e-24 | 102 |
| Msa0863970 | MtrunA17_Chr5g0446171 | 35.196 | 179 | 82 | 4 | 1 | 176 | 1 | 148 | 2.36e-17 | 81.6 |
| Msa0863970 | MtrunA17_Chr1g0185261 | 42.308 | 130 | 55 | 3 | 255 | 383 | 65 | 175 | 3.30e-17 | 80.9 |
| Msa0863970 | MtrunA17_Chr5g0446231 | 38.462 | 130 | 63 | 3 | 40 | 166 | 1 | 116 | 2.51e-13 | 72.4 |
| Msa0863970 | MtrunA17_Chr5g0413371 | 35.152 | 165 | 85 | 2 | 35 | 199 | 1 | 143 | 3.95e-13 | 72.0 |
| Msa0863970 | MtrunA17_Chr5g0446191 | 38.168 | 131 | 64 | 3 | 39 | 166 | 15 | 131 | 1.14e-11 | 67.4 |
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|
Find 123 sgRNAs with CRISPR-Local
Find 185 sgRNAs with CRISPR-GE
CRISPR-Local
| sgRNA_sequence | on_target_score | Position | Region |
|---|---|---|---|
| TATTGTTAGTAACTTTATTT+TGG | 0.155616 | 5_4:+64114064 | Msa0863970:three_prime_UTR |
| AGTAATCAGTAACTTTATTT+TGG | 0.175697 | 5_4:+64113983 | Msa0863970:three_prime_UTR |
| GTCTCAACACTTCAAGTTCA+TGG | 0.265620 | 5_4:-64112090 | None:intergenic |
| GCTTAAATACTTACATTTGT+AGG | 0.271720 | 5_4:-64113539 | None:intergenic |
| GGAGAAACTCTTAAGGTTAA+AGG | 0.271874 | 5_4:+64111853 | Msa0863970:CDS |
| TGAAACAGTAAACAAGAATT+TGG | 0.280388 | 5_4:+64112661 | Msa0863970:CDS |
| AATTGTTAGTAACTTTGTTT+TGG | 0.287134 | 5_4:+64114142 | Msa0863970:three_prime_UTR |
| GCATGCATGGACCAATCTTT+TGG | 0.292810 | 5_4:-64113872 | None:intergenic |
| ATTTAAGCTCATCAATAGTT+TGG | 0.295375 | 5_4:-64112816 | None:intergenic |
| GACTGGTGAGATGGAGAATA+AGG | 0.296831 | 5_4:+64112453 | Msa0863970:CDS |
| AGTTGAAGTGTGAGGTTAAT+AGG | 0.300952 | 5_4:+64112377 | Msa0863970:CDS |
| AGTTGGAGTGTGAGGTTAAT+AGG | 0.313791 | 5_4:+64112209 | Msa0863970:CDS |
| TTAATAAGTTGAAGGAAGAT+AGG | 0.328036 | 5_4:+64112308 | Msa0863970:CDS |
| GTCAAAATCATTACATGTTA+AGG | 0.357681 | 5_4:+64113644 | Msa0863970:CDS |
| AGCAATACTTGAACAAGATC+TGG | 0.362926 | 5_4:-64111704 | None:intergenic |
| GGGCTGCTTGCATCTTTGCC+TGG | 0.376137 | 5_4:-64113774 | None:intergenic |
| GTCCATGCATGCAGGCAATT+AGG | 0.379329 | 5_4:+64113883 | Msa0863970:three_prime_UTR |
| GGAAAGACAACAACTTGAAA+TGG | 0.380275 | 5_4:+64111832 | Msa0863970:CDS |
| TGAAAGAGTTGAAGGTGTTT+TGG | 0.381818 | 5_4:+64111751 | Msa0863970:CDS |
| GGTTGAAGTGTGAGGTTGAC+AGG | 0.395371 | 5_4:+64112041 | Msa0863970:CDS |
| CTTAGAGCAGAATGTTGAAA+TGG | 0.410048 | 5_4:+64111811 | Msa0863970:CDS |
| ATACTTACATTTGTAGGATC+AGG | 0.410411 | 5_4:-64113533 | None:intergenic |
| TGTAGCACCTTCTGCAAGTC+AGG | 0.411433 | 5_4:+64113469 | Msa0863970:CDS |
| ATGGAAACTCTTGACTTAGA+AGG | 0.415536 | 5_4:+64111671 | Msa0863970:CDS |
| GCAACTGGTGCATTTGCAAC+AGG | 0.416299 | 5_4:-64113497 | None:intergenic |
| TTGAAATGGAGAAACTCTTA+AGG | 0.417844 | 5_4:+64111846 | Msa0863970:CDS |
| TAATAGGTTGAAGGAAGATA+TGG | 0.418849 | 5_4:+64112225 | Msa0863970:CDS |
| GATCTTGTTCAAGTATTGCT+TGG | 0.420517 | 5_4:+64111707 | Msa0863970:CDS |
| TTGAAAACCAAGATGATTGC+TGG | 0.423791 | 5_4:+64113750 | Msa0863970:CDS |
| GCCTGGACCAGCAATCATCT+TGG | 0.434652 | 5_4:-64113757 | None:intergenic |
| AAGGAAGATAGGGTGGAGGA+TGG | 0.446522 | 5_4:+64112319 | Msa0863970:CDS |
| AAGTTATAATGCTCTCTTGA+AGG | 0.449736 | 5_4:+64111934 | Msa0863970:CDS |
| GAGTGATGAGCTAGAGTGTG+AGG | 0.452371 | 5_4:+64112285 | Msa0863970:CDS |
| TCAGCAGCCATAAAATCAAC+TGG | 0.457108 | 5_4:-64112872 | None:intergenic |
| TTTGTAGGATCAGGCACATA+AGG | 0.460936 | 5_4:-64113524 | None:intergenic |
| TTGACATATTACTCGCGTCT+TGG | 0.462570 | 5_4:+64112741 | Msa0863970:CDS |
| AAAGTTAAAGATGCATCATC+AGG | 0.464717 | 5_4:+64112926 | Msa0863970:CDS |
| AGTCAGGTCTAGTCATGTTA+AGG | 0.465936 | 5_4:+64113683 | Msa0863970:CDS |
| GAAACTTATGAAAGAGTTGA+AGG | 0.466139 | 5_4:+64111743 | Msa0863970:CDS |
| GTGTGAGGTTAATAGGTTGA+AGG | 0.471254 | 5_4:+64112216 | Msa0863970:CDS |
| GGCACATAAGGTATTGCAAC+TGG | 0.471489 | 5_4:-64113512 | None:intergenic |
| CACTGTCTTCAATTACCAAT+GGG | 0.473098 | 5_4:-64113794 | None:intergenic |
| GTGTGAGGTTAATAAGTTGA+AGG | 0.473823 | 5_4:+64112300 | Msa0863970:CDS |
| CTTGAACCTAAAATCGAACC+TGG | 0.474651 | 5_4:+64111584 | Msa0863970:CDS |
| TTAATAAGTTGAAAGAAGAA+AGG | 0.475430 | 5_4:+64112140 | Msa0863970:CDS |
| ACCAAGATGATTGCTGGTCC+AGG | 0.475629 | 5_4:+64113756 | Msa0863970:CDS |
| TCTATCACTAGACCTGACTT+TGG | 0.479541 | 5_4:-64113718 | None:intergenic |
| TTCTAAGAAGGAGAAACGTT+GGG | 0.480244 | 5_4:+64112020 | Msa0863970:CDS |
| AGCTTAAATGTCTCTGGTGG+TGG | 0.480275 | 5_4:+64112830 | Msa0863970:CDS |
| AAAGAAGAAAGGGTGGAGGA+TGG | 0.483082 | 5_4:+64112151 | Msa0863970:CDS |
| ATGTCAAGAAAGCCAAAGTC+AGG | 0.490710 | 5_4:+64113667 | Msa0863970:CDS |
| CCAGAGAGAGACCAAAAGAT+TGG | 0.491518 | 5_4:+64113861 | Msa0863970:three_prime_UTR |
| GTCCTAATTGCCTGCATGCA+TGG | 0.492307 | 5_4:-64113885 | None:intergenic |
| TCTGCTCTAAGAGTTGAATC+TGG | 0.493051 | 5_4:-64111799 | None:intergenic |
| AGACTTCATATGACATTAGC+AGG | 0.496406 | 5_4:+64113913 | Msa0863970:three_prime_UTR |
| CTTGCAGAAGGTGCTACAAT+TGG | 0.498019 | 5_4:-64113464 | None:intergenic |
| ATCAAGAATCACGTGGTTGG+AGG | 0.498362 | 5_4:-64111615 | None:intergenic |
| TTGATGAGCTTAAATGTCTC+TGG | 0.501390 | 5_4:+64112824 | Msa0863970:CDS |
| AACATGACTAGACCTGACTT+TGG | 0.503870 | 5_4:-64113679 | None:intergenic |
| AAGGAAGATATGGTGGAGGG+TGG | 0.509218 | 5_4:+64112235 | Msa0863970:CDS |
| TAATAAGTTGAAGGAAGATA+GGG | 0.510480 | 5_4:+64112309 | Msa0863970:CDS |
| GGTACTTCGACATGACCAAC+TGG | 0.512667 | 5_4:-64113437 | None:intergenic |
| GCGGATGATGGCTGTGAGCT+TGG | 0.513466 | 5_4:+64112415 | Msa0863970:CDS |
| ACTCTTAAGGTTAAAGGCTG+AGG | 0.519219 | 5_4:+64111859 | Msa0863970:CDS |
| TAATAAGTTGAAAGAAGAAA+GGG | 0.520930 | 5_4:+64112141 | Msa0863970:CDS |
| AGAGACGAAGATGATGAAGT+TGG | 0.521296 | 5_4:+64111638 | Msa0863970:CDS |
| GTTGAAGGAAGATAGGGTGG+AGG | 0.521973 | 5_4:+64112315 | Msa0863970:CDS |
| AAGAAGAAAGGGTGGAGGAT+GGG | 0.524336 | 5_4:+64112152 | Msa0863970:CDS |
| TTTCTAAGAAGGAGAAACGT+TGG | 0.528902 | 5_4:+64112019 | Msa0863970:CDS |
| GGAAGAGTTAAAGAAAAGAG+AGG | 0.532934 | 5_4:+64111880 | Msa0863970:CDS |
| AGGAAGATAGGGTGGAGGAT+GGG | 0.537473 | 5_4:+64112320 | Msa0863970:CDS |
| TAGGTTGAAGGAAGATATGG+TGG | 0.538319 | 5_4:+64112228 | Msa0863970:CDS |
| TGGCAACTATAAGAGAATTG+AGG | 0.540056 | 5_4:+64112681 | Msa0863970:CDS |
| GAAGATTGTATTGTGTGGGC+TGG | 0.542503 | 5_4:+64112611 | Msa0863970:CDS |
| TAAGTTGAAGGAAGATAGGG+TGG | 0.544598 | 5_4:+64112312 | Msa0863970:CDS |
| TGAAGTTGGAGCATTTCCTA+TGG | 0.545820 | 5_4:+64111652 | Msa0863970:CDS |
| AACAATGCCACAATAGATGA+TGG | 0.547079 | 5_4:-64114029 | None:intergenic |
| TGGTTGGAGGAAGGTGACCC+AGG | 0.547723 | 5_4:-64111602 | None:intergenic |
| GTGTGAGGTTAATAGGTTGA+CGG | 0.547979 | 5_4:+64112384 | Msa0863970:CDS |
| AGGAAGATATGGTGGAGGGT+GGG | 0.550407 | 5_4:+64112236 | Msa0863970:CDS |
| ATTGCTTGGATCTTTACAGA+TGG | 0.550510 | 5_4:+64111721 | Msa0863970:CDS |
| GAATAATGAGTTGGAGTGTG+AGG | 0.552863 | 5_4:+64112201 | Msa0863970:CDS |
| TCACTGTCTTCAATTACCAA+TGG | 0.555333 | 5_4:-64113795 | None:intergenic |
| GCAATACTTGAACAAGATCT+GGG | 0.555962 | 5_4:-64111703 | None:intergenic |
| AAAGATTGGTCCATGCATGC+AGG | 0.559005 | 5_4:+64113875 | Msa0863970:three_prime_UTR |
| CAAAGATGCAAGCAGCCCAT+TGG | 0.565479 | 5_4:+64113779 | Msa0863970:CDS |
| TCTATCAAGAATCACGTGGT+TGG | 0.566169 | 5_4:-64111618 | None:intergenic |
| TCTGGTGGTGGAAACAATGA+GGG | 0.566395 | 5_4:+64112842 | Msa0863970:CDS |
| TAAGTTGAAAGAAGAAAGGG+TGG | 0.575684 | 5_4:+64112144 | Msa0863970:CDS |
| CTCTGGTGGTGGAAACAATG+AGG | 0.577778 | 5_4:+64112841 | Msa0863970:CDS |
| AGTTGGTCATGTCGAAGTAC+CGG | 0.578493 | 5_4:+64113439 | Msa0863970:CDS |
| TATAATGCTCTCTTGAAGGA+AGG | 0.584603 | 5_4:+64111938 | Msa0863970:CDS |
| TTATGAACCATCATCTATTG+TGG | 0.584836 | 5_4:+64114022 | Msa0863970:three_prime_UTR |
| GAATGGTGAGTTGGAGTGTG+AGG | 0.586676 | 5_4:+64112117 | Msa0863970:CDS |
| GAGGGTGATGATATTGATGA+AGG | 0.589257 | 5_4:+64113819 | Msa0863970:CDS |
| GTTGAAAGAAGAAAGGGTGG+AGG | 0.590291 | 5_4:+64112147 | Msa0863970:CDS |
| AGAATCACGTGGTTGGAGGA+AGG | 0.592347 | 5_4:-64111611 | None:intergenic |
| GATGATATTGATGAAGGTGA+TGG | 0.594476 | 5_4:+64113825 | Msa0863970:CDS |
| GAAGGTGCTACAATTGGTGC+CGG | 0.596125 | 5_4:-64113458 | None:intergenic |
| TCTAAGTCAAGAGTTTCCAT+AGG | 0.597975 | 5_4:-64111668 | None:intergenic |
| GTTGAAGGAAGATATGGTGG+AGG | 0.598207 | 5_4:+64112231 | Msa0863970:CDS |
| CTGCATTGTTCTGCACCAGT+TGG | 0.601057 | 5_4:+64113422 | Msa0863970:CDS |
| GAGACAAAAGAATGGTGAGT+TGG | 0.607745 | 5_4:+64112108 | Msa0863970:CDS |
| TTGAAGGAAGATATGGTGGA+GGG | 0.608134 | 5_4:+64112232 | Msa0863970:CDS |
| TCTCTTGAAGGAAGGCAAGA+CGG | 0.610347 | 5_4:+64111946 | Msa0863970:CDS |
| GTAATTGAAGACAGTGATGA+GGG | 0.618776 | 5_4:+64113801 | Msa0863970:CDS |
| TAAGTTGACACAAGAAAGTG+AGG | 0.628177 | 5_4:+64111985 | Msa0863970:CDS |
| AAACGTTGGGTTGAAGTGTG+AGG | 0.632328 | 5_4:+64112033 | Msa0863970:CDS |
| GGAGGAAGATTGTATTGTGT+GGG | 0.635950 | 5_4:+64112607 | Msa0863970:CDS |
| GATACAGAGACCGCTCGAAG+TGG | 0.636412 | 5_4:-64114111 | None:intergenic |
| GGATCAACCTGACTTGCAGA+AGG | 0.648405 | 5_4:-64113476 | None:intergenic |
| CTGGTGGTGGAAACAATGAG+GGG | 0.648857 | 5_4:+64112843 | Msa0863970:CDS |
| GAAGTGTTGAGACAAAAGAA+TGG | 0.649570 | 5_4:+64112100 | Msa0863970:CDS |
| GGGAGGAAGATTGTATTGTG+TGG | 0.661249 | 5_4:+64112606 | Msa0863970:CDS |
| CGTCTCTATCAAGAATCACG+TGG | 0.663157 | 5_4:-64111622 | None:intergenic |
| GAATGATGAGTTGAAGTGTG+AGG | 0.673142 | 5_4:+64112369 | Msa0863970:CDS |
| GGTAATTGAAGACAGTGATG+AGG | 0.677445 | 5_4:+64113800 | Msa0863970:CDS |
| TTGAACCTAAAATCGAACCT+GGG | 0.681572 | 5_4:+64111585 | Msa0863970:CDS |
| ATGAGCTTAAATGTCTCTGG+TGG | 0.688563 | 5_4:+64112827 | Msa0863970:CDS |
| GTGTTATGAACCACTTCGAG+CGG | 0.691445 | 5_4:+64114101 | Msa0863970:three_prime_UTR |
| CTTCATATGACATTAGCAGG+AGG | 0.696178 | 5_4:+64113916 | Msa0863970:three_prime_UTR |
| TGGTGGTGGAAACAATGAGG+GGG | 0.698952 | 5_4:+64112844 | Msa0863970:CDS |
| GCAGCCATAAAATCAACTGG+AGG | 0.708098 | 5_4:-64112869 | None:intergenic |
CRISPR-GE
| badsite warning | sgRNA_sequence | Strand | Position | Region | GC_content |
|---|---|---|---|---|---|
| !! | TATAGTGTAAAGAAATTATA+GGG | - | chr5_4:64113161-64113180 | None:intergenic | 15.0% |
| !! | ATATAGTGTAAAGAAATTAT+AGG | - | chr5_4:64113162-64113181 | None:intergenic | 15.0% |
| !! | AAATACAAACATTATACATA+AGG | - | chr5_4:64113212-64113231 | None:intergenic | 15.0% |
| !!! | TTTATACATTATTTTAGACT+AGG | + | chr5_4:64113326-64113345 | Msa0863970:intron | 15.0% |
| !!! | TTATACATTATTTTAGACTA+GGG | + | chr5_4:64113327-64113346 | Msa0863970:intron | 15.0% |
| !!! | TATTGTTAGTAACTTTATTT+TGG | + | chr5_4:64114064-64114083 | Msa0863970:three_prime_UTR | 15.0% |
| !!! | AAACTATTGATTTTCTAAGA+AGG | + | chr5_4:64112008-64112027 | Msa0863970:CDS | 20.0% |
| !!! | TTAATAAGTTGAAAGAAGAA+AGG | + | chr5_4:64112140-64112159 | Msa0863970:CDS | 20.0% |
| !!! | TAATAAGTTGAAAGAAGAAA+GGG | + | chr5_4:64112141-64112160 | Msa0863970:CDS | 20.0% |
| !! | NNNNNNNNTGACAAAGTTGA+AGG | + | chr5_4:64112577-64112596 | Msa0863970:intron | 20.0% |
| !! | TATATATGATTTCATCAATG+AGG | - | chr5_4:64113113-64113132 | None:intergenic | 20.0% |
| !! | ATGAAATCATATATATTCGA+AGG | + | chr5_4:64113118-64113137 | Msa0863970:intron | 20.0% |
| !!! | ATATTTTATTGTATCTCTAG+TGG | + | chr5_4:64113246-64113265 | Msa0863970:intron | 20.0% |
| !!! | TATTTTATTGTATCTCTAGT+GGG | + | chr5_4:64113247-64113266 | Msa0863970:intron | 20.0% |
| !!! | TGTAAGTTATGTATTTTACA+GGG | + | chr5_4:64113609-64113628 | Msa0863970:intron | 20.0% |
| !!! | AGTAATCAGTAACTTTATTT+TGG | + | chr5_4:64113983-64114002 | Msa0863970:three_prime_UTR | 20.0% |
| !!! | AATTGTTAGTAACTTTGTTT+TGG | + | chr5_4:64114142-64114161 | Msa0863970:three_prime_UTR | 20.0% |
| ! | GAGAAAAAAGAATAATGAGT+TGG | + | chr5_4:64112192-64112211 | Msa0863970:CDS | 25.0% |
| !! | TTAATAAGTTGAAGGAAGAT+AGG | + | chr5_4:64112308-64112327 | Msa0863970:CDS | 25.0% |
| !! | TAATAAGTTGAAGGAAGATA+GGG | + | chr5_4:64112309-64112328 | Msa0863970:CDS | 25.0% |
| ! | TGAAACAGTAAACAAGAATT+TGG | + | chr5_4:64112661-64112680 | Msa0863970:CDS | 25.0% |
| ! | ATTTAAGCTCATCAATAGTT+TGG | - | chr5_4:64112819-64112838 | None:intergenic | 25.0% |
| !! | TGGGTATTGTATTTCTATTA+GGG | + | chr5_4:64113266-64113285 | Msa0863970:intron | 25.0% |
| ! | ACATATCAGCTAAGATATTT+GGG | - | chr5_4:64113367-64113386 | None:intergenic | 25.0% |
| ! | AACATATCAGCTAAGATATT+TGG | - | chr5_4:64113368-64113387 | None:intergenic | 25.0% |
| ! | GCTTAAATACTTACATTTGT+AGG | - | chr5_4:64113542-64113561 | None:intergenic | 25.0% |
| !! | GTGTAAGTTATGTATTTTAC+AGG | + | chr5_4:64113608-64113627 | Msa0863970:intron | 25.0% |
| !! | GTATTTTACAGGGAAATAAA+AGG | + | chr5_4:64113619-64113638 | Msa0863970:intron | 25.0% |
| ! | GTCAAAATCATTACATGTTA+AGG | + | chr5_4:64113644-64113663 | Msa0863970:CDS | 25.0% |
| GAAACTTATGAAAGAGTTGA+AGG | + | chr5_4:64111743-64111762 | Msa0863970:CDS | 30.0% | |
| TTGAAATGGAGAAACTCTTA+AGG | + | chr5_4:64111846-64111865 | Msa0863970:CDS | 30.0% | |
| AAGTTATAATGCTCTCTTGA+AGG | + | chr5_4:64111934-64111953 | Msa0863970:CDS | 30.0% | |
| ! | TAATAGGTTGAAGGAAGATA+TGG | + | chr5_4:64112225-64112244 | Msa0863970:CDS | 30.0% |
| ! | TAATAGGTTGACGGAAAAAA+CGG | + | chr5_4:64112393-64112412 | Msa0863970:CDS | 30.0% |
| TGACAAAGTTGAAGGAAAAA+TGG | + | chr5_4:64112585-64112604 | Msa0863970:intron | 30.0% | |
| GACAAAGTTGAAGGAAAAAT+GGG | + | chr5_4:64112586-64112605 | Msa0863970:intron | 30.0% | |
| GCTGGAATTGAGATTAAAAA+TGG | + | chr5_4:64112629-64112648 | Msa0863970:CDS | 30.0% | |
| TCTTGCATGAAAAAGTTTCA+AGG | + | chr5_4:64112780-64112799 | Msa0863970:CDS | 30.0% | |
| AAAGTTAAAGATGCATCATC+AGG | + | chr5_4:64112926-64112945 | Msa0863970:CDS | 30.0% | |
| GGTATGGAATTGAATTCAAT+AGG | + | chr5_4:64112947-64112966 | Msa0863970:intron | 30.0% | |
| GGTGTGATCAAATAAATGTT+TGG | + | chr5_4:64112968-64112987 | Msa0863970:intron | 30.0% | |
| AAATGTTTGGTTAGATTGCT+AGG | + | chr5_4:64112981-64113000 | Msa0863970:intron | 30.0% | |
| ACTACATGCTTCAATAAAAC+AGG | - | chr5_4:64113035-64113054 | None:intergenic | 30.0% | |
| !! | GTTTTATTGAAGCATGTAGT+AGG | + | chr5_4:64113035-64113054 | Msa0863970:intron | 30.0% |
| !! | ATAACTTGTTTGAACTTGTG+AGG | + | chr5_4:64113067-64113086 | Msa0863970:intron | 30.0% |
| TCGAAGGTTAAATTAGTAAG+TGG | + | chr5_4:64113134-64113153 | Msa0863970:intron | 30.0% | |
| ! | GTGGGTATTGTATTTCTATT+AGG | + | chr5_4:64113265-64113284 | Msa0863970:intron | 30.0% |
| ! | GGGTATTGTATTTCTATTAG+GGG | + | chr5_4:64113267-64113286 | Msa0863970:intron | 30.0% |
| ATACTTACATTTGTAGGATC+AGG | - | chr5_4:64113536-64113555 | None:intergenic | 30.0% | |
| TTATGAACCATCATCTATTG+TGG | + | chr5_4:64114022-64114041 | Msa0863970:three_prime_UTR | 30.0% | |
| TTGAACCTAAAATCGAACCT+GGG | + | chr5_4:64111585-64111604 | Msa0863970:CDS | 35.0% | |
| TCTAAGTCAAGAGTTTCCAT+AGG | - | chr5_4:64111671-64111690 | None:intergenic | 35.0% | |
| ATGGAAACTCTTGACTTAGA+AGG | + | chr5_4:64111671-64111690 | Msa0863970:CDS | 35.0% | |
| GCAATACTTGAACAAGATCT+GGG | - | chr5_4:64111706-64111725 | None:intergenic | 35.0% | |
| AGCAATACTTGAACAAGATC+TGG | - | chr5_4:64111707-64111726 | None:intergenic | 35.0% | |
| ! | GATCTTGTTCAAGTATTGCT+TGG | + | chr5_4:64111707-64111726 | Msa0863970:CDS | 35.0% |
| ATTGCTTGGATCTTTACAGA+TGG | + | chr5_4:64111721-64111740 | Msa0863970:CDS | 35.0% | |
| !!! | TGAAAGAGTTGAAGGTGTTT+TGG | + | chr5_4:64111751-64111770 | Msa0863970:CDS | 35.0% |
| CTTAGAGCAGAATGTTGAAA+TGG | + | chr5_4:64111811-64111830 | Msa0863970:CDS | 35.0% | |
| GGAAAGACAACAACTTGAAA+TGG | + | chr5_4:64111832-64111851 | Msa0863970:CDS | 35.0% | |
| GGAGAAACTCTTAAGGTTAA+AGG | + | chr5_4:64111853-64111872 | Msa0863970:CDS | 35.0% | |
| GGAAGAGTTAAAGAAAAGAG+AGG | + | chr5_4:64111880-64111899 | Msa0863970:CDS | 35.0% | |
| TATAATGCTCTCTTGAAGGA+AGG | + | chr5_4:64111938-64111957 | Msa0863970:CDS | 35.0% | |
| ! | TAAGTTGACACAAGAAAGTG+AGG | + | chr5_4:64111985-64112004 | Msa0863970:CDS | 35.0% |
| ! | TTTCTAAGAAGGAGAAACGT+TGG | + | chr5_4:64112019-64112038 | Msa0863970:CDS | 35.0% |
| ! | TTCTAAGAAGGAGAAACGTT+GGG | + | chr5_4:64112020-64112039 | Msa0863970:CDS | 35.0% |
| ! | TTGACAGGTTGAACGAAAAA+AGG | + | chr5_4:64112056-64112075 | Msa0863970:CDS | 35.0% |
| ! | TGACAGGTTGAACGAAAAAA+GGG | + | chr5_4:64112057-64112076 | Msa0863970:CDS | 35.0% |
| !! | GAAGTGTTGAGACAAAAGAA+TGG | + | chr5_4:64112100-64112119 | Msa0863970:CDS | 35.0% |
| ! | TAAGTTGAAAGAAGAAAGGG+TGG | + | chr5_4:64112144-64112163 | Msa0863970:CDS | 35.0% |
| ! | GTGTGAGGTTAATAAGTTGA+AGG | + | chr5_4:64112132-64112151 | Msa0863970:CDS | 35.0% |
| AGTTGAAGTGTGAGGTTAAT+AGG | + | chr5_4:64112377-64112396 | Msa0863970:CDS | 35.0% | |
| ! | TGAGATGGAGAATAAGGTTT+TGG | + | chr5_4:64112459-64112478 | Msa0863970:intron | 35.0% |
| AAAGTTGAAGGAAAAATGGG+AGG | + | chr5_4:64112589-64112608 | Msa0863970:intron | 35.0% | |
| TGGCAACTATAAGAGAATTG+AGG | + | chr5_4:64112681-64112700 | Msa0863970:CDS | 35.0% | |
| TTGATGAGCTTAAATGTCTC+TGG | + | chr5_4:64112824-64112843 | Msa0863970:CDS | 35.0% | |
| TAAAGATGCATCATCAGGTA+TGG | + | chr5_4:64112931-64112950 | Msa0863970:intron | 35.0% | |
| GGGGTTGTATCATATTATGT+AGG | + | chr5_4:64113286-64113305 | Msa0863970:intron | 35.0% | |
| TTGAAAACCAAGATGATTGC+TGG | + | chr5_4:64113750-64113769 | Msa0863970:CDS | 35.0% | |
| CACTGTCTTCAATTACCAAT+GGG | - | chr5_4:64113797-64113816 | None:intergenic | 35.0% | |
| TCACTGTCTTCAATTACCAA+TGG | - | chr5_4:64113798-64113817 | None:intergenic | 35.0% | |
| GTAATTGAAGACAGTGATGA+GGG | + | chr5_4:64113801-64113820 | Msa0863970:CDS | 35.0% | |
| GATGATATTGATGAAGGTGA+TGG | + | chr5_4:64113825-64113844 | Msa0863970:CDS | 35.0% | |
| AGACTTCATATGACATTAGC+AGG | + | chr5_4:64113913-64113932 | Msa0863970:three_prime_UTR | 35.0% | |
| AACAATGCCACAATAGATGA+TGG | - | chr5_4:64114032-64114051 | None:intergenic | 35.0% | |
| !!! | CAGGTTCGATTTTAGGTTCA+AGG | - | chr5_4:64111586-64111605 | None:intergenic | 40.0% |
| CTTGAACCTAAAATCGAACC+TGG | + | chr5_4:64111584-64111603 | Msa0863970:CDS | 40.0% | |
| TCTATCAAGAATCACGTGGT+TGG | - | chr5_4:64111621-64111640 | None:intergenic | 40.0% | |
| AGAGACGAAGATGATGAAGT+TGG | + | chr5_4:64111638-64111657 | Msa0863970:CDS | 40.0% | |
| ! | TGAAGTTGGAGCATTTCCTA+TGG | + | chr5_4:64111652-64111671 | Msa0863970:CDS | 40.0% |
| !!! | TTGAAGGTGTTTTGGTGAGA+AGG | + | chr5_4:64111759-64111778 | Msa0863970:CDS | 40.0% |
| !!! | TGAAGGTGTTTTGGTGAGAA+GGG | + | chr5_4:64111760-64111779 | Msa0863970:CDS | 40.0% |
| !!! | TGTTTTGGTGAGAAGGGATT+TGG | + | chr5_4:64111766-64111785 | Msa0863970:CDS | 40.0% |
| !! | GTTTTGGTGAGAAGGGATTT+GGG | + | chr5_4:64111767-64111786 | Msa0863970:CDS | 40.0% |
| !! | TCTGCTCTAAGAGTTGAATC+TGG | - | chr5_4:64111802-64111821 | None:intergenic | 40.0% |
| ACTCTTAAGGTTAAAGGCTG+AGG | + | chr5_4:64111859-64111878 | Msa0863970:CDS | 40.0% | |
| ! | GTCTCAACACTTCAAGTTCA+TGG | - | chr5_4:64112093-64112112 | None:intergenic | 40.0% |
| GAGACAAAAGAATGGTGAGT+TGG | + | chr5_4:64112108-64112127 | Msa0863970:CDS | 40.0% | |
| ! | GAATAATGAGTTGGAGTGTG+AGG | + | chr5_4:64112201-64112220 | Msa0863970:CDS | 40.0% |
| AGTTGGAGTGTGAGGTTAAT+AGG | + | chr5_4:64112125-64112144 | Msa0863970:CDS | 40.0% | |
| ! | GTGTGAGGTTAATAGGTTGA+AGG | + | chr5_4:64112216-64112235 | Msa0863970:CDS | 40.0% |
| ! | TAGGTTGAAGGAAGATATGG+TGG | + | chr5_4:64112228-64112247 | Msa0863970:CDS | 40.0% |
| ! | TTGAAGGAAGATATGGTGGA+GGG | + | chr5_4:64112232-64112251 | Msa0863970:CDS | 40.0% |
| ! | TAAGTTGAAGGAAGATAGGG+TGG | + | chr5_4:64112312-64112331 | Msa0863970:CDS | 40.0% |
| ! | GAATGATGAGTTGAAGTGTG+AGG | + | chr5_4:64112369-64112388 | Msa0863970:CDS | 40.0% |
| ! | GTGTGAGGTTAATAGGTTGA+CGG | + | chr5_4:64112216-64112235 | Msa0863970:CDS | 40.0% |
| GAGAAAAATGACTGGTGAGA+TGG | + | chr5_4:64112444-64112463 | Msa0863970:CDS | 40.0% | |
| GGAGGAAGATTGTATTGTGT+GGG | + | chr5_4:64112607-64112626 | Msa0863970:CDS | 40.0% | |
| TTGACATATTACTCGCGTCT+TGG | + | chr5_4:64112741-64112760 | Msa0863970:CDS | 40.0% | |
| GCATGAAAAAGTTTCAAGGC+TGG | + | chr5_4:64112784-64112803 | Msa0863970:CDS | 40.0% | |
| TGAAAAAGTTTCAAGGCTGG+AGG | + | chr5_4:64112787-64112806 | Msa0863970:CDS | 40.0% | |
| ATGAGCTTAAATGTCTCTGG+TGG | + | chr5_4:64112827-64112846 | Msa0863970:CDS | 40.0% | |
| !! | GGATCCTCCAGTTGATTTTA+TGG | + | chr5_4:64112865-64112884 | Msa0863970:CDS | 40.0% |
| TCAGCAGCCATAAAATCAAC+TGG | - | chr5_4:64112875-64112894 | None:intergenic | 40.0% | |
| GTTTGGTTAGATTGCTAGGT+AGG | + | chr5_4:64112985-64113004 | Msa0863970:intron | 40.0% | |
| AAACAGGAAAATCACGTTCC+AGG | - | chr5_4:64113019-64113038 | None:intergenic | 40.0% | |
| ACTTGTGAGGCTACTAGTAA+TGG | + | chr5_4:64113080-64113099 | Msa0863970:intron | 40.0% | |
| TTTGTAGGATCAGGCACATA+AGG | - | chr5_4:64113527-64113546 | None:intergenic | 40.0% | |
| ATGTCAAGAAAGCCAAAGTC+AGG | + | chr5_4:64113667-64113686 | Msa0863970:CDS | 40.0% | |
| AACATGACTAGACCTGACTT+TGG | - | chr5_4:64113682-64113701 | None:intergenic | 40.0% | |
| AGTCAGGTCTAGTCATGTTA+AGG | + | chr5_4:64113683-64113702 | Msa0863970:CDS | 40.0% | |
| ATGTCGCAAAAACCAAAGTC+AGG | + | chr5_4:64113706-64113725 | Msa0863970:CDS | 40.0% | |
| TCTATCACTAGACCTGACTT+TGG | - | chr5_4:64113721-64113740 | None:intergenic | 40.0% | |
| GGTAATTGAAGACAGTGATG+AGG | + | chr5_4:64113800-64113819 | Msa0863970:CDS | 40.0% | |
| GAGGGTGATGATATTGATGA+AGG | + | chr5_4:64113819-64113838 | Msa0863970:CDS | 40.0% | |
| CTTCATATGACATTAGCAGG+AGG | + | chr5_4:64113916-64113935 | Msa0863970:three_prime_UTR | 40.0% | |
| ATCAAGAATCACGTGGTTGG+AGG | - | chr5_4:64111618-64111637 | None:intergenic | 45.0% | |
| CGTCTCTATCAAGAATCACG+TGG | - | chr5_4:64111625-64111644 | None:intergenic | 45.0% | |
| TCTCTTGAAGGAAGGCAAGA+CGG | + | chr5_4:64111946-64111965 | Msa0863970:CDS | 45.0% | |
| !! | AAACGTTGGGTTGAAGTGTG+AGG | + | chr5_4:64112033-64112052 | Msa0863970:CDS | 45.0% |
| ! | CAGGTTGAACGAAAAAAGGG+AGG | + | chr5_4:64112060-64112079 | Msa0863970:CDS | 45.0% |
| GTTGAACGAAAAAAGGGAGG+AGG | + | chr5_4:64112063-64112082 | Msa0863970:CDS | 45.0% | |
| AACGAAAAAAGGGAGGAGGA+AGG | + | chr5_4:64112067-64112086 | Msa0863970:CDS | 45.0% | |
| GTTGAAAGAAGAAAGGGTGG+AGG | + | chr5_4:64112147-64112166 | Msa0863970:CDS | 45.0% | |
| AAAGAAGAAAGGGTGGAGGA+TGG | + | chr5_4:64112151-64112170 | Msa0863970:CDS | 45.0% | |
| AAGAAGAAAGGGTGGAGGAT+GGG | + | chr5_4:64112152-64112171 | Msa0863970:CDS | 45.0% | |
| GTTGAAGGAAGATATGGTGG+AGG | + | chr5_4:64112231-64112250 | Msa0863970:CDS | 45.0% | |
| ! | TAGGTTGACGGAAAAAACGG+CGG | + | chr5_4:64112396-64112415 | Msa0863970:CDS | 45.0% |
| GGTGTGCAGAGAAAAATGAC+TGG | + | chr5_4:64112436-64112455 | Msa0863970:CDS | 45.0% | |
| GACTGGTGAGATGGAGAATA+AGG | + | chr5_4:64112453-64112472 | Msa0863970:CDS | 45.0% | |
| GGGAGGAAGATTGTATTGTG+TGG | + | chr5_4:64112606-64112625 | Msa0863970:CDS | 45.0% | |
| GAAGATTGTATTGTGTGGGC+TGG | + | chr5_4:64112611-64112630 | Msa0863970:CDS | 45.0% | |
| AGCTTAAATGTCTCTGGTGG+TGG | + | chr5_4:64112830-64112849 | Msa0863970:CDS | 45.0% | |
| !! | TCTGGTGGTGGAAACAATGA+GGG | + | chr5_4:64112842-64112861 | Msa0863970:CDS | 45.0% |
| GCAGCCATAAAATCAACTGG+AGG | - | chr5_4:64112872-64112891 | None:intergenic | 45.0% | |
| AGATTGCTAGGTAGGTAGCT+TGG | + | chr5_4:64112993-64113012 | Msa0863970:intron | 45.0% | |
| AGTTGGTCATGTCGAAGTAC+CGG | + | chr5_4:64113439-64113458 | Msa0863970:CDS | 45.0% | |
| !! | CTTGCAGAAGGTGCTACAAT+TGG | - | chr5_4:64113467-64113486 | None:intergenic | 45.0% |
| !! | GGCACATAAGGTATTGCAAC+TGG | - | chr5_4:64113515-64113534 | None:intergenic | 45.0% |
| ATTCACTCACACACACACAC+AGG | - | chr5_4:64113570-64113589 | None:intergenic | 45.0% | |
| ! | CCAATCTTTTGGTCTCTCTC+TGG | - | chr5_4:64113864-64113883 | None:intergenic | 45.0% |
| CCAGAGAGAGACCAAAAGAT+TGG | + | chr5_4:64113861-64113880 | Msa0863970:three_prime_UTR | 45.0% | |
| ! | GCATGCATGGACCAATCTTT+TGG | - | chr5_4:64113875-64113894 | None:intergenic | 45.0% |
| ! | AAAGATTGGTCCATGCATGC+AGG | + | chr5_4:64113875-64113894 | Msa0863970:three_prime_UTR | 45.0% |
| GTGTTATGAACCACTTCGAG+CGG | + | chr5_4:64114101-64114120 | Msa0863970:three_prime_UTR | 45.0% | |
| ! | GGTGACCCAGGTTCGATTTT+AGG | - | chr5_4:64111593-64111612 | None:intergenic | 50.0% |
| AGAATCACGTGGTTGGAGGA+AGG | - | chr5_4:64111614-64111633 | None:intergenic | 50.0% | |
| GGTTGAAGTGTGAGGTTGAC+AGG | + | chr5_4:64112041-64112060 | Msa0863970:CDS | 50.0% | |
| ! | GAATGGTGAGTTGGAGTGTG+AGG | + | chr5_4:64112117-64112136 | Msa0863970:CDS | 50.0% |
| ! | AAGGAAGATATGGTGGAGGG+TGG | + | chr5_4:64112235-64112254 | Msa0863970:CDS | 50.0% |
| ! | AGGAAGATATGGTGGAGGGT+GGG | + | chr5_4:64112236-64112255 | Msa0863970:CDS | 50.0% |
| GAGTGATGAGCTAGAGTGTG+AGG | + | chr5_4:64112285-64112304 | Msa0863970:CDS | 50.0% | |
| GTTGAAGGAAGATAGGGTGG+AGG | + | chr5_4:64112315-64112334 | Msa0863970:CDS | 50.0% | |
| AAGGAAGATAGGGTGGAGGA+TGG | + | chr5_4:64112319-64112338 | Msa0863970:CDS | 50.0% | |
| AGGAAGATAGGGTGGAGGAT+GGG | + | chr5_4:64112320-64112339 | Msa0863970:CDS | 50.0% | |
| ACGGAAAAAACGGCGGATGA+TGG | + | chr5_4:64112403-64112422 | Msa0863970:CDS | 50.0% | |
| !! | CTCTGGTGGTGGAAACAATG+AGG | + | chr5_4:64112841-64112860 | Msa0863970:CDS | 50.0% |
| !! | CTGGTGGTGGAAACAATGAG+GGG | + | chr5_4:64112843-64112862 | Msa0863970:CDS | 50.0% |
| !! | TGGTGGTGGAAACAATGAGG+GGG | + | chr5_4:64112844-64112863 | Msa0863970:CDS | 50.0% |
| CTGCATTGTTCTGCACCAGT+TGG | + | chr5_4:64113422-64113441 | Msa0863970:CDS | 50.0% | |
| GGTACTTCGACATGACCAAC+TGG | - | chr5_4:64113440-64113459 | None:intergenic | 50.0% | |
| !! | GAAGGTGCTACAATTGGTGC+CGG | - | chr5_4:64113461-64113480 | None:intergenic | 50.0% |
| TGTAGCACCTTCTGCAAGTC+AGG | + | chr5_4:64113469-64113488 | Msa0863970:CDS | 50.0% | |
| ! | GGATCAACCTGACTTGCAGA+AGG | - | chr5_4:64113479-64113498 | None:intergenic | 50.0% |
| GCAACTGGTGCATTTGCAAC+AGG | - | chr5_4:64113500-64113519 | None:intergenic | 50.0% | |
| ACCAAGATGATTGCTGGTCC+AGG | + | chr5_4:64113756-64113775 | Msa0863970:CDS | 50.0% | |
| CAAAGATGCAAGCAGCCCAT+TGG | + | chr5_4:64113779-64113798 | Msa0863970:CDS | 50.0% | |
| GTCCATGCATGCAGGCAATT+AGG | + | chr5_4:64113883-64113902 | Msa0863970:three_prime_UTR | 50.0% | |
| GTCCTAATTGCCTGCATGCA+TGG | - | chr5_4:64113888-64113907 | None:intergenic | 50.0% | |
| GCCTGGACCAGCAATCATCT+TGG | - | chr5_4:64113760-64113779 | None:intergenic | 55.0% | |
| GATACAGAGACCGCTCGAAG+TGG | - | chr5_4:64114114-64114133 | None:intergenic | 55.0% | |
| TGGTTGGAGGAAGGTGACCC+AGG | - | chr5_4:64111605-64111624 | None:intergenic | 60.0% | |
| ! | GCGGATGATGGCTGTGAGCT+TGG | + | chr5_4:64112415-64112434 | Msa0863970:CDS | 60.0% |
| GCTAGGTAGGTAGCTTGGCC+TGG | + | chr5_4:64112998-64113017 | Msa0863970:intron | 60.0% | |
| GGGCTGCTTGCATCTTTGCC+TGG | - | chr5_4:64113777-64113796 | None:intergenic | 60.0% |
| Chromosome | Type | Strat | End | Strand | Name |
|---|---|---|---|---|---|
| chr5_4 | gene | 64111578 | 64114180 | 64111578 | ID=Msa0863970;Name=Msa0863970 |
| chr5_4 | mRNA | 64111578 | 64114180 | 64111578 | ID=Msa0863970-mRNA-1;Parent=Msa0863970;Name=Msa0863970-mRNA-1;_AED=0.02;_eAED=0.02;_QI=0|0.33|0.25|1|1|1|4|320|550 |
| chr5_4 | exon | 64111578 | 64112474 | 64111578 | ID=Msa0863970-mRNA-1:exon:20159;Parent=Msa0863970-mRNA-1 |
| chr5_4 | exon | 64112593 | 64112947 | 64112593 | ID=Msa0863970-mRNA-1:exon:20160;Parent=Msa0863970-mRNA-1 |
| chr5_4 | exon | 64113378 | 64113547 | 64113378 | ID=Msa0863970-mRNA-1:exon:20161;Parent=Msa0863970-mRNA-1 |
| chr5_4 | exon | 64113630 | 64114180 | 64113630 | ID=Msa0863970-mRNA-1:exon:20162;Parent=Msa0863970-mRNA-1 |
| chr5_4 | CDS | 64111578 | 64112474 | 64111578 | ID=Msa0863970-mRNA-1:cds;Parent=Msa0863970-mRNA-1 |
| chr5_4 | CDS | 64112593 | 64112947 | 64112593 | ID=Msa0863970-mRNA-1:cds;Parent=Msa0863970-mRNA-1 |
| chr5_4 | CDS | 64113378 | 64113547 | 64113378 | ID=Msa0863970-mRNA-1:cds;Parent=Msa0863970-mRNA-1 |
| chr5_4 | CDS | 64113630 | 64113860 | 64113630 | ID=Msa0863970-mRNA-1:cds;Parent=Msa0863970-mRNA-1 |
| chr5_4 | three_prime_UTR | 64113861 | 64114180 | 64113861 | ID=Msa0863970-mRNA-1:three_prime_utr;Parent=Msa0863970-mRNA-1 |
| Gene Sequence |
| Protein sequence |
