Alfalfa Gene Editing Database
Alfalfa Gene Editing Database
| Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa0678860 | XP_013468641.1 | 99.206 | 126 | 1 | 0 | 1 | 126 | 1 | 126 | 4.14e-86 | 256 |
| Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa0678860 | sp|Q8L8Q8|Y5486_ARATH | 82.500 | 120 | 21 | 0 | 1 | 120 | 1 | 120 | 2.35e-73 | 217 |
| Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa0678860 | A0A072VML2 | 99.206 | 126 | 1 | 0 | 1 | 126 | 1 | 126 | 1.98e-86 | 256 |
| Gene ID | Type | Classification |
|---|
| Gene ID | Type | Classification |
|---|
Co-expression Network
| Gene1 | Gene2 | correlation coefficient | p_value | FDR |
|---|---|---|---|---|
| Msa0001950 | Msa0678860 | 0.852842 | 3.539818e-61 | -8.615850e-47 |
| Msa0003470 | Msa0678860 | 0.815901 | 7.289892e-52 | -8.615850e-47 |
| Msa0004360 | Msa0678860 | 0.805861 | 1.087999e-49 | -8.615850e-47 |
| Msa0005050 | Msa0678860 | 0.800212 | 1.602543e-48 | -8.615850e-47 |
| Msa0017940 | Msa0678860 | 0.822870 | 1.879550e-53 | -8.615850e-47 |
| Msa0024680 | Msa0678860 | 0.833062 | 6.617555e-56 | -8.615850e-47 |
| Msa0027540 | Msa0678860 | 0.834345 | 3.163131e-56 | -8.615850e-47 |
| Msa0029710 | Msa0678860 | 0.803185 | 3.933270e-49 | -8.615850e-47 |
| Msa0030310 | Msa0678860 | 0.831347 | 1.757676e-55 | -8.615850e-47 |
| Msa0030380 | Msa0678860 | 0.848116 | 7.521295e-60 | -8.615850e-47 |
| Msa0032120 | Msa0678860 | 0.800534 | 1.377625e-48 | -8.615850e-47 |
| Msa0032840 | Msa0678860 | -0.816572 | 5.160020e-52 | -8.615850e-47 |
| Msa0048020 | Msa0678860 | 0.803333 | 3.664355e-49 | -8.615850e-47 |
| Msa0049400 | Msa0678860 | -0.817140 | 3.847454e-52 | -8.615850e-47 |
| Msa0053110 | Msa0678860 | 0.826779 | 2.249023e-54 | -8.615850e-47 |
| Msa0072810 | Msa0678860 | 0.824863 | 6.408302e-54 | -8.615850e-47 |
| Msa0073670 | Msa0678860 | 0.815465 | 9.118344e-52 | -8.615850e-47 |
| Msa0075310 | Msa0678860 | 0.826793 | 2.231770e-54 | -8.615850e-47 |
| Msa0084680 | Msa0678860 | 0.810473 | 1.132593e-50 | -8.615850e-47 |
| Msa0094950 | Msa0678860 | 0.827887 | 1.220567e-54 | -8.615850e-47 |
| Msa0095380 | Msa0678860 | 0.845947 | 2.954765e-59 | -8.615850e-47 |
| Msa0096670 | Msa0678860 | 0.802414 | 5.674569e-49 | -8.615850e-47 |
| Msa0103000 | Msa0678860 | 0.815043 | 1.131482e-51 | -8.615850e-47 |
| Msa0109950 | Msa0678860 | 0.817046 | 4.039361e-52 | -8.615850e-47 |
| Msa0120330 | Msa0678860 | 0.810507 | 1.113874e-50 | -8.615850e-47 |
| Msa0607200 | Msa0678860 | 0.812230 | 4.705884e-51 | -8.615850e-47 |
| Msa0607600 | Msa0678860 | -0.804355 | 2.248010e-49 | -8.615850e-47 |
| Msa0618010 | Msa0678860 | 0.832431 | 9.491640e-56 | -8.615850e-47 |
| Msa0619070 | Msa0678860 | 0.805594 | 1.237993e-49 | -8.615850e-47 |
| Msa0638690 | Msa0678860 | 0.827793 | 1.285390e-54 | -8.615850e-47 |
| Msa0639120 | Msa0678860 | 0.813046 | 3.121128e-51 | -8.615850e-47 |
| Msa0642650 | Msa0678860 | 0.832870 | 7.384697e-56 | -8.615850e-47 |
| Msa0647380 | Msa0678860 | 0.835015 | 2.145550e-56 | -8.615850e-47 |
| Msa0669850 | Msa0678860 | 0.851582 | 8.077943e-61 | -8.615850e-47 |
| Msa0670980 | Msa0678860 | 0.801151 | 1.030969e-48 | -8.615850e-47 |
| Msa0677290 | Msa0678860 | 0.833808 | 4.310372e-56 | -8.615850e-47 |
| Msa0678860 | Msa0681890 | 0.820819 | 5.607177e-53 | -8.615850e-47 |
| Msa0678860 | Msa0684510 | 0.800635 | 1.313779e-48 | -8.615850e-47 |
| Msa0678860 | Msa0687630 | 0.814343 | 1.617004e-51 | -8.615850e-47 |
| Msa0678860 | Msa0687860 | -0.802633 | 5.115221e-49 | -8.615850e-47 |
| Msa0678860 | Msa0690560 | 0.804217 | 2.401856e-49 | -8.615850e-47 |
| Msa0678860 | Msa0692080 | 0.802572 | 5.264059e-49 | -8.615850e-47 |
| Msa0678860 | Msa0703230 | 0.805413 | 1.351331e-49 | -8.615850e-47 |
| Msa0678860 | Msa0709760 | 0.802452 | 5.573511e-49 | -8.615850e-47 |
| Msa0678860 | Msa0712310 | 0.800567 | 1.356475e-48 | -8.615850e-47 |
| Msa0678860 | Msa0712980 | 0.817980 | 2.488697e-52 | -8.615850e-47 |
| Msa0678860 | Msa0725920 | 0.822207 | 2.679556e-53 | -8.615850e-47 |
| Msa0678860 | Msa0730180 | 0.800301 | 1.536907e-48 | -8.615850e-47 |
| Msa0678860 | Msa0734660 | 0.808614 | 2.840252e-50 | -8.615850e-47 |
| Msa0678860 | Msa0740040 | 0.819645 | 1.041985e-52 | -8.615850e-47 |
| Msa0678860 | Msa0747780 | 0.814486 | 1.503399e-51 | -8.615850e-47 |
| Msa0678860 | Msa0755340 | 0.831695 | 1.443169e-55 | -8.615850e-47 |
| Msa0678860 | Msa0766470 | 0.802609 | 5.173692e-49 | -8.615850e-47 |
| Msa0678860 | Msa0776220 | 0.835134 | 2.002651e-56 | -8.615850e-47 |
| Msa0678860 | Msa0787750 | 0.822582 | 2.192537e-53 | -8.615850e-47 |
| Msa0678860 | Msa0790390 | -0.807883 | 4.065109e-50 | -8.615850e-47 |
| Msa0678860 | Msa0792790 | -0.813577 | 2.385440e-51 | -8.615850e-47 |
| Msa0678860 | Msa0813670 | 0.809906 | 1.501305e-50 | -8.615850e-47 |
| Msa0678860 | Msa0813720 | 0.838994 | 2.065364e-57 | -8.615850e-47 |
| Msa0678860 | Msa0813740 | 0.812384 | 4.356476e-51 | -8.615850e-47 |
| Msa0678860 | Msa0824910 | 0.801226 | 9.951176e-49 | -8.615850e-47 |
| Msa0678860 | Msa0830990 | 0.806425 | 8.276028e-50 | -8.615850e-47 |
| Msa0678860 | Msa0845750 | 0.828639 | 8.038158e-55 | -8.615850e-47 |
| Msa0678860 | Msa0846030 | 0.812402 | 4.315976e-51 | -8.615850e-47 |
| Msa0678860 | Msa0852730 | 0.806609 | 7.570617e-50 | -8.615850e-47 |
| Msa0678860 | Msa0854120 | 0.817023 | 4.088046e-52 | -8.615850e-47 |
| Msa0678860 | Msa0863970 | 0.801336 | 9.447113e-49 | -8.615850e-47 |
| Msa0678860 | Msa0872310 | 0.826082 | 3.296510e-54 | -8.615850e-47 |
| Msa0678860 | Msa0874760 | 0.800502 | 1.398776e-48 | -8.615850e-47 |
| Msa0678860 | Msa0878980 | -0.801479 | 8.829636e-49 | -8.615850e-47 |
| Msa0678860 | Msa0883030 | 0.841473 | 4.651031e-58 | -8.615850e-47 |
| Msa0678860 | Msa0890250 | 0.817464 | 3.252797e-52 | -8.615850e-47 |
| Msa0678860 | Msa0900630 | 0.837509 | 4.985341e-57 | -8.615850e-47 |
| Msa0678860 | Msa0903330 | 0.841140 | 5.692528e-58 | -8.615850e-47 |
| Msa0678860 | Msa0905260 | 0.817571 | 3.077877e-52 | -8.615850e-47 |
| Msa0678860 | Msa0905550 | 0.818848 | 1.582522e-52 | -8.615850e-47 |
| Msa0678860 | Msa0912600 | 0.802048 | 6.749505e-49 | -8.615850e-47 |
| Msa0678860 | Msa0925160 | 0.831776 | 1.378262e-55 | -8.615850e-47 |
| Msa0678860 | Msa0926460 | 0.835979 | 1.223751e-56 | -8.615850e-47 |
| Msa0678860 | Msa0930330 | 0.810069 | 1.384346e-50 | -8.615850e-47 |
| Msa0678860 | Msa0937550 | 0.833076 | 6.563574e-56 | -8.615850e-47 |
| Msa0678860 | Msa0955260 | 0.802353 | 5.840690e-49 | -8.615850e-47 |
| Msa0678860 | Msa0958020 | 0.812347 | 4.438691e-51 | -8.615850e-47 |
| Msa0678860 | Msa0965860 | 0.830041 | 3.670276e-55 | -8.615850e-47 |
| Msa0678860 | Msa0979550 | 0.802452 | 5.572365e-49 | -8.615850e-47 |
| Msa0678860 | Msa0990520 | 0.837961 | 3.816489e-57 | -8.615850e-47 |
| Msa0678860 | Msa1000690 | 0.818952 | 1.498261e-52 | -8.615850e-47 |
| Msa0678860 | Msa1012810 | 0.817615 | 3.007512e-52 | -8.615850e-47 |
| Msa0678860 | Msa1018790 | 0.840170 | 1.021471e-57 | -8.615850e-47 |
| Msa0678860 | Msa1044340 | 0.834698 | 2.578534e-56 | -8.615850e-47 |
| Msa0678860 | Msa1049510 | -0.811935 | 5.458964e-51 | -8.615850e-47 |
| Msa0678860 | Msa1054240 | 0.832401 | 9.656956e-56 | -8.615850e-47 |
| Msa0678860 | Msa1082700 | 0.837100 | 6.343456e-57 | -8.615850e-47 |
| Msa0678860 | Msa1084470 | 0.811347 | 7.326407e-51 | -8.615850e-47 |
| Msa0678860 | Msa1094420 | 0.801879 | 7.311098e-49 | -8.615850e-47 |
| Msa0678860 | Msa1126120 | -0.800665 | 1.295838e-48 | -8.615850e-47 |
| Msa0678860 | Msa1126510 | 0.807354 | 5.266563e-50 | -8.615850e-47 |
| Msa0678860 | Msa1135690 | 0.817766 | 2.781242e-52 | -8.615850e-47 |
| Msa0678860 | Msa1139810 | 0.811037 | 8.552281e-51 | -8.615850e-47 |
| Msa0678860 | Msa1143840 | 0.806316 | 8.729304e-50 | -8.615850e-47 |
| Msa0678860 | Msa1150970 | 0.815360 | 9.619571e-52 | -8.615850e-47 |
| Msa0678860 | Msa1159100 | 0.831433 | 1.673665e-55 | -8.615850e-47 |
| Msa0678860 | Msa1159990 | 0.807765 | 4.308014e-50 | -8.615850e-47 |
| Msa0678860 | Msa1160570 | 0.821719 | 3.476249e-53 | -8.615850e-47 |
| Msa0678860 | Msa1174010 | 0.826506 | 2.613193e-54 | -8.615850e-47 |
| Msa0678860 | Msa1177240 | 0.808543 | 2.941547e-50 | -8.615850e-47 |
| Msa0678860 | Msa1188940 | 0.814560 | 1.447684e-51 | -8.615850e-47 |
| Msa0678860 | Msa1197110 | 0.801842 | 7.439701e-49 | -8.615850e-47 |
| Msa0678860 | Msa1210770 | 0.814468 | 1.517060e-51 | -8.615850e-47 |
| Msa0678860 | Msa1211090 | 0.825034 | 5.839924e-54 | -8.615850e-47 |
| Msa0678860 | Msa1217860 | 0.814104 | 1.825677e-51 | -8.615850e-47 |
| Msa0678860 | Msa1221560 | 0.800123 | 1.670194e-48 | -8.615850e-47 |
| Msa0678860 | Msa1226620 | 0.827954 | 1.176053e-54 | -8.615850e-47 |
| Msa0678860 | Msa1237030 | 0.826351 | 2.845103e-54 | -8.615850e-47 |
| Msa0678860 | Msa1246530 | -0.804890 | 1.738735e-49 | -8.615850e-47 |
| Msa0678860 | Msa1249870 | 0.833462 | 5.260309e-56 | -8.615850e-47 |
| Msa0678860 | Msa1254610 | 0.805716 | 1.167078e-49 | -8.615850e-47 |
| Msa0678860 | Msa1281190 | 0.801910 | 7.203795e-49 | -8.615850e-47 |
| Msa0678860 | Msa1284520 | 0.836690 | 8.072205e-57 | -8.615850e-47 |
| Msa0678860 | Msa1316780 | 0.811365 | 7.260972e-51 | -8.615850e-47 |
| Msa0678860 | Msa1316830 | 0.833055 | 6.643869e-56 | -8.615850e-47 |
| Msa0678860 | Msa1337090 | 0.826339 | 2.864199e-54 | -8.615850e-47 |
| Msa0678860 | Msa1341070 | 0.800682 | 1.285150e-48 | -8.615850e-47 |
| Msa0678860 | Msa1354040 | 0.803313 | 3.699952e-49 | -8.615850e-47 |
| Msa0678860 | Msa1358550 | 0.806431 | 8.252707e-50 | -8.615850e-47 |
| Msa0678860 | Msa1365150 | 0.816252 | 6.084926e-52 | -8.615850e-47 |
| Msa0678860 | Msa1365200 | 0.812690 | 3.734652e-51 | -8.615850e-47 |
| Msa0678860 | Msa1365870 | 0.806690 | 7.277515e-50 | -8.615850e-47 |
| Msa0678860 | Msa1367880 | 0.811076 | 8.389991e-51 | -8.615850e-47 |
| Msa0678860 | Msa1373510 | 0.827421 | 1.579584e-54 | -8.615850e-47 |
| Msa0678860 | Msa1379570 | 0.806611 | 7.561429e-50 | -8.615850e-47 |
| Msa0678860 | Msa1379990 | 0.812546 | 4.015514e-51 | -8.615850e-47 |
| Msa0678860 | Msa1382310 | 0.851202 | 1.034630e-60 | -8.615850e-47 |
| Msa0678860 | Msa1382720 | 0.802840 | 4.634139e-49 | -8.615850e-47 |
| Msa0678860 | Msa1389950 | 0.812025 | 5.217804e-51 | -8.615850e-47 |
| Msa0678860 | Msa1390310 | 0.820120 | 8.110822e-53 | -8.615850e-47 |
| Msa0678860 | Msa1396950 | 0.806294 | 8.819714e-50 | -8.615850e-47 |
| Msa0678860 | Msa1397050 | 0.805841 | 1.098414e-49 | -8.615850e-47 |
| Msa0678860 | Msa1403580 | -0.809693 | 1.667632e-50 | -8.615850e-47 |
| Msa0678860 | Msa1404190 | 0.814751 | 1.313434e-51 | -8.615850e-47 |
| Msa0678860 | Msa1406040 | 0.807731 | 4.379400e-50 | -8.615850e-47 |
| Msa0678860 | Msa1419850 | 0.806977 | 6.328280e-50 | -8.615850e-47 |
| Msa0678860 | Msa1439960 | 0.818235 | 2.178448e-52 | -8.615850e-47 |
| Msa0678860 | Msa1448690 | 0.800704 | 1.272079e-48 | -8.615850e-47 |
| Msa0678860 | Msa1449880 | 0.839459 | 1.564869e-57 | -8.615850e-47 |
| Msa0678860 | Msa1453620 | 0.809465 | 1.867261e-50 | -8.615850e-47 |
| Msa0678860 | Msa1460470 | 0.809003 | 2.345524e-50 | -8.615850e-47 |
| Msa0678860 | Msa1464830 | 0.800440 | 1.439619e-48 | -8.615850e-47 |
| Msa0678860 | Msa1466990 | 0.812538 | 4.031889e-51 | -8.615850e-47 |
| Msa0124990 | Msa0678860 | 0.804020 | 2.639558e-49 | -8.615850e-47 |
| Msa0125580 | Msa0678860 | 0.875261 | 3.541997e-68 | -8.615850e-47 |
| Msa0139900 | Msa0678860 | 0.800467 | 1.422013e-48 | -8.615850e-47 |
| Msa0141830 | Msa0678860 | 0.847266 | 1.289059e-59 | -8.615850e-47 |
| Msa0143080 | Msa0678860 | 0.832821 | 7.596615e-56 | -8.615850e-47 |
| Msa0143240 | Msa0678860 | -0.816260 | 6.061245e-52 | -8.615850e-47 |
| Msa0143430 | Msa0678860 | 0.814669 | 1.369878e-51 | -8.615850e-47 |
| Msa0145950 | Msa0678860 | 0.804157 | 2.471569e-49 | -8.615850e-47 |
| Msa0146470 | Msa0678860 | 0.802735 | 4.873043e-49 | -8.615850e-47 |
| Msa0168100 | Msa0678860 | 0.830629 | 2.636813e-55 | -8.615850e-47 |
| Msa0169570 | Msa0678860 | 0.913132 | 8.766219e-84 | -8.615850e-47 |
| Msa0169620 | Msa0678860 | 0.802421 | 5.656242e-49 | -8.615850e-47 |
| Msa0169690 | Msa0678860 | 0.803997 | 2.669169e-49 | -8.615850e-47 |
| Msa0172350 | Msa0678860 | 0.827968 | 1.167024e-54 | -8.615850e-47 |
| Msa0173740 | Msa0678860 | 0.846746 | 1.789615e-59 | -8.615850e-47 |
| Msa0173820 | Msa0678860 | 0.847618 | 1.032037e-59 | -8.615850e-47 |
| Msa0173830 | Msa0678860 | 0.827316 | 1.673774e-54 | -8.615850e-47 |
| Msa0182930 | Msa0678860 | 0.808355 | 3.225751e-50 | -8.615850e-47 |
| Msa0183620 | Msa0678860 | 0.837717 | 4.407927e-57 | -8.615850e-47 |
| Msa0186890 | Msa0678860 | 0.807819 | 4.195267e-50 | -8.615850e-47 |
| Msa0187930 | Msa0678860 | 0.800449 | 1.434094e-48 | -8.615850e-47 |
| Msa0188680 | Msa0678860 | -0.800691 | 1.279838e-48 | -8.615850e-47 |
| Msa0194540 | Msa0678860 | 0.810347 | 1.205735e-50 | -8.615850e-47 |
| Msa0194970 | Msa0678860 | 0.838509 | 2.756271e-57 | -8.615850e-47 |
| Msa0199690 | Msa0678860 | 0.803619 | 3.197404e-49 | -8.615850e-47 |
| Msa0200970 | Msa0678860 | 0.806678 | 7.321802e-50 | -8.615850e-47 |
| Msa0207000 | Msa0678860 | 0.827589 | 1.439462e-54 | -8.615850e-47 |
| Msa0222920 | Msa0678860 | 0.803620 | 3.195867e-49 | -8.615850e-47 |
| Msa0224730 | Msa0678860 | 0.813976 | 1.948585e-51 | -8.615850e-47 |
| Msa0230550 | Msa0678860 | -0.815301 | 9.917371e-52 | -8.615850e-47 |
| Msa0235980 | Msa0678860 | 0.802323 | 5.923213e-49 | -8.615850e-47 |
| Msa0236980 | Msa0678860 | 0.828519 | 8.592116e-55 | -8.615850e-47 |
| Msa0371070 | Msa0678860 | 0.800051 | 1.727708e-48 | -8.615850e-47 |
| Msa0378080 | Msa0678860 | 0.817834 | 2.685151e-52 | -8.615850e-47 |
| Msa0388720 | Msa0678860 | 0.820418 | 6.933290e-53 | -8.615850e-47 |
| Msa0395960 | Msa0678860 | 0.802352 | 5.844418e-49 | -8.615850e-47 |
| Msa0402330 | Msa0678860 | 0.817431 | 3.309085e-52 | -8.615850e-47 |
| Msa0413450 | Msa0678860 | 0.801406 | 9.139011e-49 | -8.615850e-47 |
| Msa0418220 | Msa0678860 | 0.809953 | 1.466217e-50 | -8.615850e-47 |
| Msa0422910 | Msa0678860 | 0.800987 | 1.113540e-48 | -8.615850e-47 |
| Msa0423360 | Msa0678860 | -0.806888 | 6.609947e-50 | -8.615850e-47 |
| Msa0425940 | Msa0678860 | 0.830144 | 3.465559e-55 | -8.615850e-47 |
| Msa0426020 | Msa0678860 | 0.800312 | 1.529021e-48 | -8.615850e-47 |
| Msa0426160 | Msa0678860 | 0.828493 | 8.719153e-55 | -8.615850e-47 |
| Msa0429210 | Msa0678860 | 0.815399 | 9.432104e-52 | -8.615850e-47 |
| Msa0436460 | Msa0678860 | 0.812692 | 3.729787e-51 | -8.615850e-47 |
| Msa0468160 | Msa0678860 | 0.815607 | 8.477622e-52 | -8.615850e-47 |
| Msa0469910 | Msa0678860 | -0.829470 | 5.055017e-55 | -8.615850e-47 |
| Msa0472380 | Msa0678860 | 0.827528 | 1.488368e-54 | -8.615850e-47 |
| Msa0476320 | Msa0678860 | 0.803672 | 3.117046e-49 | -8.615850e-47 |
| Msa0482680 | Msa0678860 | 0.807279 | 5.461768e-50 | -8.615850e-47 |
| Msa0242230 | Msa0678860 | 0.810346 | 1.206604e-50 | -8.615850e-47 |
| Msa0244270 | Msa0678860 | 0.819581 | 1.077440e-52 | -8.615850e-47 |
| Msa0244780 | Msa0678860 | 0.800227 | 1.590925e-48 | -8.615850e-47 |
| Msa0246690 | Msa0678860 | 0.850667 | 1.464612e-60 | -8.615850e-47 |
| Msa0259560 | Msa0678860 | 0.806635 | 7.473981e-50 | -8.615850e-47 |
| Msa0260240 | Msa0678860 | 0.834137 | 3.566396e-56 | -8.615850e-47 |
| Msa0260280 | Msa0678860 | 0.836293 | 1.018921e-56 | -8.615850e-47 |
| Msa0267760 | Msa0678860 | 0.832615 | 8.542199e-56 | -8.615850e-47 |
| Msa0268130 | Msa0678860 | 0.808688 | 2.738328e-50 | -8.615850e-47 |
| Msa0275030 | Msa0678860 | 0.819263 | 1.273179e-52 | -8.615850e-47 |
| Msa0280490 | Msa0678860 | 0.822363 | 2.465397e-53 | -8.615850e-47 |
| Msa0280900 | Msa0678860 | 0.822940 | 1.810367e-53 | -8.615850e-47 |
| Msa0298990 | Msa0678860 | 0.800428 | 1.447934e-48 | -8.615850e-47 |
| Msa0304260 | Msa0678860 | 0.834298 | 3.249445e-56 | -8.615850e-47 |
| Msa0304300 | Msa0678860 | 0.825172 | 5.417427e-54 | -8.615850e-47 |
| Msa0317260 | Msa0678860 | 0.816499 | 5.357899e-52 | -8.615850e-47 |
| Msa0319200 | Msa0678860 | 0.809139 | 2.193337e-50 | -8.615850e-47 |
| Msa0328210 | Msa0678860 | 0.825428 | 4.713261e-54 | -8.615850e-47 |
| Msa0344640 | Msa0678860 | 0.803179 | 3.943906e-49 | -8.615850e-47 |
| Msa0349060 | Msa0678860 | 0.803529 | 3.338286e-49 | -8.615850e-47 |
| Msa0355270 | Msa0678860 | 0.819550 | 1.095165e-52 | -8.615850e-47 |
| Msa0491020 | Msa0678860 | 0.805674 | 1.190830e-49 | -8.615850e-47 |
| Msa0510440 | Msa0678860 | 0.813085 | 3.059451e-51 | -8.615850e-47 |
| Msa0518040 | Msa0678860 | 0.811537 | 6.663574e-51 | -8.615850e-47 |
| Msa0520320 | Msa0678860 | 0.811745 | 6.003149e-51 | -8.615850e-47 |
| Msa0525340 | Msa0678860 | 0.800459 | 1.427351e-48 | -8.615850e-47 |
| Msa0526710 | Msa0678860 | 0.824266 | 8.858909e-54 | -8.615850e-47 |
| Msa0527590 | Msa0678860 | 0.818129 | 2.303279e-52 | -8.615850e-47 |
| Msa0527600 | Msa0678860 | 0.820562 | 6.424093e-53 | -8.615850e-47 |
| Msa0535030 | Msa0678860 | 0.839031 | 2.020456e-57 | -8.615850e-47 |
| Msa0535060 | Msa0678860 | 0.833534 | 5.045816e-56 | -8.615850e-47 |
| Msa0538570 | Msa0678860 | 0.802759 | 4.817382e-49 | -8.615850e-47 |
| Msa0541860 | Msa0678860 | 0.806517 | 7.914583e-50 | -8.615850e-47 |
| Msa0546380 | Msa0678860 | 0.800070 | 1.712467e-48 | -8.615850e-47 |
| Msa0546840 | Msa0678860 | 0.847451 | 1.146666e-59 | -8.615850e-47 |
| Msa0553150 | Msa0678860 | 0.800752 | 1.243725e-48 | -8.615850e-47 |
| Msa0560470 | Msa0678860 | 0.812427 | 4.263950e-51 | -8.615850e-47 |
| Msa0562300 | Msa0678860 | -0.809474 | 1.859142e-50 | -8.615850e-47 |
| Msa0576690 | Msa0678860 | 0.802367 | 5.801153e-49 | -8.615850e-47 |
| Msa0577390 | Msa0678860 | 0.805777 | 1.133224e-49 | -8.615850e-47 |
| Msa0579290 | Msa0678860 | 0.800923 | 1.147823e-48 | -8.615850e-47 |
| Msa0581460 | Msa0678860 | 0.822382 | 2.441030e-53 | -8.615850e-47 |
| Msa0590680 | Msa0678860 | 0.847021 | 1.504517e-59 | -8.615850e-47 |
| Msa0591060 | Msa0678860 | 0.843061 | 1.766139e-58 | -8.615850e-47 |
| Msa0591770 | Msa0678860 | 0.841757 | 3.916243e-58 | -8.615850e-47 |
PPI
| Gene1 | Gene2 | Type |
|---|
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa0678860 | MtrunA17_Chr1g0186311 | 99.206 | 126 | 1 | 0 | 1 | 126 | 1 | 126 | 3.81e-90 | 256 |
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa0678860 | AT5G64816.2 | 82.500 | 120 | 21 | 0 | 1 | 120 | 1 | 120 | 2.39e-74 | 217 |
| Msa0678860 | AT5G64816.4 | 82.500 | 120 | 21 | 0 | 1 | 120 | 1 | 120 | 2.39e-74 | 217 |
| Msa0678860 | AT5G64816.1 | 82.500 | 120 | 21 | 0 | 1 | 120 | 1 | 120 | 2.39e-74 | 217 |
| Msa0678860 | AT5G64816.3 | 82.500 | 120 | 21 | 0 | 1 | 120 | 1 | 120 | 2.39e-74 | 217 |
Find 33 sgRNAs with CRISPR-Local
Find 183 sgRNAs with CRISPR-GE
CRISPR-Local
| sgRNA_sequence | on_target_score | Position | Region |
|---|---|---|---|
| AGATATTTGGTGGTCACTTT+TGG | 0.138181 | 4_4:-35659994 | Msa0678860:CDS |
| TTCAAAGAGGATGTTGAAAA+AGG | 0.272946 | 4_4:-35659835 | Msa0678860:CDS |
| ACCAACATCAAGTACCTAAT+TGG | 0.274343 | 4_4:-35659707 | Msa0678860:CDS |
| GATACTTGTGTTACTGTTTG+TGG | 0.347747 | 4_4:-35659783 | Msa0678860:CDS |
| GCAGTCCCTGTCGTTGTTGC+AGG | 0.348680 | 4_4:-35659966 | Msa0678860:CDS |
| TATCAGAGATGGGAGATATT+TGG | 0.353189 | 4_4:-35660007 | Msa0678860:exon |
| ATTGGAATGACACATGTCTT+AGG | 0.381625 | 4_4:-35659689 | Msa0678860:CDS |
| AGACATGTGTCATTCCAATT+AGG | 0.386451 | 4_4:+35659693 | None:intergenic |
| GTAACACAAGTATCAGGAAT+TGG | 0.406394 | 4_4:+35659792 | None:intergenic |
| CAAACAGTAACACAAGTATC+AGG | 0.430522 | 4_4:+35659786 | None:intergenic |
| TTCTCTTTCTCCGCCACCGC+CGG | 0.441914 | 4_4:-35661024 | Msa0678860:intron |
| GCTTGTCCTGCAACAACGAC+AGG | 0.451940 | 4_4:+35659960 | None:intergenic |
| TATATAAATACGAAGGTAAA+GGG | 0.466273 | 4_4:-35661095 | None:intergenic |
| TCCAATTAGGTACTTGATGT+TGG | 0.474351 | 4_4:+35659706 | None:intergenic |
| AAGCATTTAGAGTTAAGAAA+AGG | 0.483524 | 4_4:-35659941 | Msa0678860:CDS |
| TGCTGAAGCTTGTGCTCGTA+CGG | 0.484272 | 4_4:-35659739 | Msa0678860:CDS |
| CTATATAAATACGAAGGTAA+AGG | 0.489752 | 4_4:-35661096 | None:intergenic |
| AGCAAAGGTTGAAGAGTGCA+AGG | 0.518677 | 4_4:-35659908 | Msa0678860:CDS |
| GTGAAACTAACCGGCGGTGG+CGG | 0.523447 | 4_4:+35661014 | None:intergenic |
| AAGTTGTGTAGTATCAGAGA+TGG | 0.527208 | 4_4:-35660018 | Msa0678860:intron |
| AAAGGAATGCAGAGGAGCAA+AGG | 0.541153 | 4_4:-35659923 | Msa0678860:CDS |
| AGAGTGCAAGGGGAAGAGAA+AGG | 0.552353 | 4_4:-35659896 | Msa0678860:CDS |
| CAGAGATGGGAGATATTTGG+TGG | 0.589138 | 4_4:-35660004 | Msa0678860:exon |
| GGCGGTGGCGGAGAAAGAGA+AGG | 0.591461 | 4_4:+35661026 | None:intergenic |
| CAAAGGTTGAAGAGTGCAAG+GGG | 0.608201 | 4_4:-35659906 | Msa0678860:CDS |
| GCAAAGGTTGAAGAGTGCAA+GGG | 0.610878 | 4_4:-35659907 | Msa0678860:CDS |
| AGTTGTGTAGTATCAGAGAT+GGG | 0.617867 | 4_4:-35660017 | Msa0678860:intron |
| AGTTAAGAAAAGGAATGCAG+AGG | 0.619043 | 4_4:-35659931 | Msa0678860:CDS |
| CTTGTCCTGCAACAACGACA+GGG | 0.623317 | 4_4:+35659961 | None:intergenic |
| GAAGTGAAACTAACCGGCGG+TGG | 0.626939 | 4_4:+35661011 | None:intergenic |
| GGAATGACACATGTCTTAGG+AGG | 0.635618 | 4_4:-35659686 | Msa0678860:CDS |
| AAAGGGTCTGCACTTCAAAG+AGG | 0.655293 | 4_4:-35659848 | Msa0678860:CDS |
| GGTGGCGGAGAAAGAGAAGG+CGG | 0.715233 | 4_4:+35661029 | None:intergenic |
CRISPR-GE
| badsite warning | sgRNA_sequence | Strand | Position | Region | GC_content |
|---|---|---|---|---|---|
| !! | TGAAAATTAAGAGAAAAATT+AGG | + | chr4_4:35659824-35659843 | None:intergenic | 15.0% |
| !!! | TTAAATGTTAAATTAACTTG+TGG | - | chr4_4:35659930-35659949 | Msa0678860:CDS | 15.0% |
| !!! | TAAATGTTAAATTAACTTGT+GGG | - | chr4_4:35659931-35659950 | Msa0678860:CDS | 15.0% |
| !!! | GTTTTTTTTTTTTGTTGAAA+TGG | - | chr4_4:35659956-35659975 | Msa0678860:CDS | 15.0% |
| !! | TTATATAGTTTAAGGAATAA+AGG | - | chr4_4:35660109-35660128 | Msa0678860:intron | 15.0% |
| !! | TATATAGTTTAAGGAATAAA+GGG | - | chr4_4:35660110-35660129 | Msa0678860:intron | 15.0% |
| !! | ATATTTAATGTCAATATTGA+GGG | - | chr4_4:35660327-35660346 | Msa0678860:intron | 15.0% |
| !! | TTAATGATAAGAAACAATTT+GGG | + | chr4_4:35660476-35660495 | None:intergenic | 15.0% |
| !! | ATTAATGATAAGAAACAATT+TGG | + | chr4_4:35660477-35660496 | None:intergenic | 15.0% |
| !! | TTTCTTATCATTAATTAAAG+TGG | - | chr4_4:35660482-35660501 | Msa0678860:intron | 15.0% |
| !! | TGAAAATTAAGAGAAAAATT+AGG | + | chr4_4:35659824-35659843 | None:intergenic | 15.0% |
| !!! | TTAAATGTTAAATTAACTTG+TGG | - | chr4_4:35659930-35659949 | Msa0678860:CDS | 15.0% |
| !!! | TAAATGTTAAATTAACTTGT+GGG | - | chr4_4:35659931-35659950 | Msa0678860:CDS | 15.0% |
| !!! | GTTTTTTTTTTTTGTTGAAA+TGG | - | chr4_4:35659956-35659975 | Msa0678860:CDS | 15.0% |
| !! | TTATATAGTTTAAGGAATAA+AGG | - | chr4_4:35660109-35660128 | Msa0678860:intron | 15.0% |
| !! | TATATAGTTTAAGGAATAAA+GGG | - | chr4_4:35660110-35660129 | Msa0678860:intron | 15.0% |
| !! | ATATTTAATGTCAATATTGA+GGG | - | chr4_4:35660327-35660346 | Msa0678860:intron | 15.0% |
| !! | TTAATGATAAGAAACAATTT+GGG | + | chr4_4:35660476-35660495 | None:intergenic | 15.0% |
| !! | ATTAATGATAAGAAACAATT+TGG | + | chr4_4:35660477-35660496 | None:intergenic | 15.0% |
| !! | TTTCTTATCATTAATTAAAG+TGG | - | chr4_4:35660482-35660501 | Msa0678860:intron | 15.0% |
| !!! | CATTTAAAGCATTTATTCAT+AGG | + | chr4_4:35659917-35659936 | None:intergenic | 20.0% |
| !!! | AAATGTTAAATTAACTTGTG+GGG | - | chr4_4:35659932-35659951 | Msa0678860:CDS | 20.0% |
| !! | AATTTAGTCACTAAACAATA+TGG | + | chr4_4:35660052-35660071 | None:intergenic | 20.0% |
| !! | ATATAGTTTAAGGAATAAAG+GGG | - | chr4_4:35660111-35660130 | Msa0678860:intron | 20.0% |
| !!! | TATTTTGAAATTTCGATACT+TGG | + | chr4_4:35660187-35660206 | None:intergenic | 20.0% |
| !! | CATATTTAATGTCAATATTG+AGG | - | chr4_4:35660326-35660345 | Msa0678860:intron | 20.0% |
| !!! | TTTGAAATTTTGATACATTG+AGG | - | chr4_4:35660401-35660420 | Msa0678860:intron | 20.0% |
| !! | TAATGATAAGAAACAATTTG+GGG | + | chr4_4:35660475-35660494 | None:intergenic | 20.0% |
| !!! | CATTTAAAGCATTTATTCAT+AGG | + | chr4_4:35659917-35659936 | None:intergenic | 20.0% |
| !!! | AAATGTTAAATTAACTTGTG+GGG | - | chr4_4:35659932-35659951 | Msa0678860:CDS | 20.0% |
| !! | AATTTAGTCACTAAACAATA+TGG | + | chr4_4:35660052-35660071 | None:intergenic | 20.0% |
| !! | ATATAGTTTAAGGAATAAAG+GGG | - | chr4_4:35660111-35660130 | Msa0678860:intron | 20.0% |
| !!! | TATTTTGAAATTTCGATACT+TGG | + | chr4_4:35660187-35660206 | None:intergenic | 20.0% |
| !! | CATATTTAATGTCAATATTG+AGG | - | chr4_4:35660326-35660345 | Msa0678860:intron | 20.0% |
| !!! | TTTGAAATTTTGATACATTG+AGG | - | chr4_4:35660401-35660420 | Msa0678860:intron | 20.0% |
| !! | TAATGATAAGAAACAATTTG+GGG | + | chr4_4:35660475-35660494 | None:intergenic | 20.0% |
| ! | GAAATAAAAAGCAAGATAGA+AGG | + | chr4_4:35659775-35659794 | None:intergenic | 25.0% |
| ! | TATGGTATTAAGGACTAAAT+TGG | + | chr4_4:35660034-35660053 | None:intergenic | 25.0% |
| ! | CACTAAACAATATGGTATTA+AGG | + | chr4_4:35660044-35660063 | None:intergenic | 25.0% |
| ! | TGACTAAGTTCAAATACTTT+AGG | - | chr4_4:35660071-35660090 | Msa0678860:intron | 25.0% |
| ! | GACTAAGTTCAAATACTTTA+GGG | - | chr4_4:35660072-35660091 | Msa0678860:intron | 25.0% |
| ! | ATCGAAATTTCAAAATAGTC+CGG | - | chr4_4:35660190-35660209 | Msa0678860:intron | 25.0% |
| ! | ATACTTACTTATTGTCGTAT+CGG | - | chr4_4:35660279-35660298 | Msa0678860:intron | 25.0% |
| !! | TATTTTACAACTGTCATTGA+GGG | - | chr4_4:35660523-35660542 | Msa0678860:intron | 25.0% |
| ! | AAACTATATAACCTAAGAGA+CGG | + | chr4_4:35660559-35660578 | None:intergenic | 25.0% |
| ! | AAAGATTGAAATTCTGTAAC+TGG | - | chr4_4:35660628-35660647 | Msa0678860:intron | 25.0% |
| ! | AAGATTGAAATTCTGTAACT+GGG | - | chr4_4:35660629-35660648 | Msa0678860:intron | 25.0% |
| ! | GTATAAATTTGAAGAAAGAG+CGG | - | chr4_4:35660684-35660703 | Msa0678860:intron | 25.0% |
| !! | AAGCATTTAGAGTTAAGAAA+AGG | - | chr4_4:35660787-35660806 | Msa0678860:intron | 25.0% |
| !! | ATGAAATTTTCGTTTGTGAA+AGG | - | chr4_4:35660862-35660881 | Msa0678860:intron | 25.0% |
| !! | TGAAATTTTCGTTTGTGAAA+GGG | - | chr4_4:35660863-35660882 | Msa0678860:intron | 25.0% |
| ! | GAAATAAAAAGCAAGATAGA+AGG | + | chr4_4:35659775-35659794 | None:intergenic | 25.0% |
| ! | TATGGTATTAAGGACTAAAT+TGG | + | chr4_4:35660034-35660053 | None:intergenic | 25.0% |
| ! | CACTAAACAATATGGTATTA+AGG | + | chr4_4:35660044-35660063 | None:intergenic | 25.0% |
| ! | TGACTAAGTTCAAATACTTT+AGG | - | chr4_4:35660071-35660090 | Msa0678860:intron | 25.0% |
| ! | GACTAAGTTCAAATACTTTA+GGG | - | chr4_4:35660072-35660091 | Msa0678860:intron | 25.0% |
| ! | ATCGAAATTTCAAAATAGTC+CGG | - | chr4_4:35660190-35660209 | Msa0678860:intron | 25.0% |
| ! | ATACTTACTTATTGTCGTAT+CGG | - | chr4_4:35660279-35660298 | Msa0678860:intron | 25.0% |
| !! | TATTTTACAACTGTCATTGA+GGG | - | chr4_4:35660523-35660542 | Msa0678860:intron | 25.0% |
| ! | AAACTATATAACCTAAGAGA+CGG | + | chr4_4:35660559-35660578 | None:intergenic | 25.0% |
| ! | AAAGATTGAAATTCTGTAAC+TGG | - | chr4_4:35660628-35660647 | Msa0678860:intron | 25.0% |
| ! | AAGATTGAAATTCTGTAACT+GGG | - | chr4_4:35660629-35660648 | Msa0678860:intron | 25.0% |
| ! | GTATAAATTTGAAGAAAGAG+CGG | - | chr4_4:35660684-35660703 | Msa0678860:intron | 25.0% |
| !! | AAGCATTTAGAGTTAAGAAA+AGG | - | chr4_4:35660787-35660806 | Msa0678860:intron | 25.0% |
| !! | ATGAAATTTTCGTTTGTGAA+AGG | - | chr4_4:35660862-35660881 | Msa0678860:intron | 25.0% |
| !! | TGAAATTTTCGTTTGTGAAA+GGG | - | chr4_4:35660863-35660882 | Msa0678860:intron | 25.0% |
| ! | TTTGAAATTTCGATACTTGG+AGG | + | chr4_4:35660184-35660203 | None:intergenic | 30.0% |
| ATTAATTAAAGTGGCACCAA+TGG | - | chr4_4:35660491-35660510 | Msa0678860:intron | 30.0% | |
| ! | CTATTTTACAACTGTCATTG+AGG | - | chr4_4:35660522-35660541 | Msa0678860:intron | 30.0% |
| TTCAAAGAGGATGTTGAAAA+AGG | - | chr4_4:35660893-35660912 | Msa0678860:intron | 30.0% | |
| ! | TTTGAAATTTCGATACTTGG+AGG | + | chr4_4:35660184-35660203 | None:intergenic | 30.0% |
| ATTAATTAAAGTGGCACCAA+TGG | - | chr4_4:35660491-35660510 | Msa0678860:intron | 30.0% | |
| ! | CTATTTTACAACTGTCATTG+AGG | - | chr4_4:35660522-35660541 | Msa0678860:intron | 30.0% |
| TTCAAAGAGGATGTTGAAAA+AGG | - | chr4_4:35660893-35660912 | Msa0678860:intron | 30.0% | |
| AGAATGGAAGTGAAACTAAC+CGG | + | chr4_4:35659726-35659745 | None:intergenic | 35.0% | |
| AAGGAACGAAAATGGAAGAA+TGG | + | chr4_4:35659742-35659761 | None:intergenic | 35.0% | |
| GAAATGGAAAGGAACGAAAA+TGG | + | chr4_4:35659750-35659769 | None:intergenic | 35.0% | |
| GATAGAAGGAAGAAATGGAA+AGG | + | chr4_4:35659761-35659780 | None:intergenic | 35.0% | |
| AGCAAGATAGAAGGAAGAAA+TGG | + | chr4_4:35659766-35659785 | None:intergenic | 35.0% | |
| TTTCAAAATAGTCCGGATTG+TGG | - | chr4_4:35660197-35660216 | Msa0678860:intron | 35.0% | |
| TGATTACTCGTTACACATTC+AGG | - | chr4_4:35660432-35660451 | Msa0678860:intron | 35.0% | |
| GATTACTCGTTACACATTCA+GGG | - | chr4_4:35660433-35660452 | Msa0678860:intron | 35.0% | |
| TAAAATAGTCACAGTGCCAT+TGG | + | chr4_4:35660510-35660529 | None:intergenic | 35.0% | |
| !!! | AACTGGGTTGTTTGTTTTGT+TGG | - | chr4_4:35660645-35660664 | Msa0678860:intron | 35.0% |
| !!! | ACTGGGTTGTTTGTTTTGTT+GGG | - | chr4_4:35660646-35660665 | Msa0678860:intron | 35.0% |
| AAGTTGTGTAGTATCAGAGA+TGG | - | chr4_4:35660710-35660729 | Msa0678860:intron | 35.0% | |
| AGTTGTGTAGTATCAGAGAT+GGG | - | chr4_4:35660711-35660730 | Msa0678860:intron | 35.0% | |
| TATCAGAGATGGGAGATATT+TGG | - | chr4_4:35660721-35660740 | Msa0678860:intron | 35.0% | |
| !! | AGATATTTGGTGGTCACTTT+TGG | - | chr4_4:35660734-35660753 | Msa0678860:intron | 35.0% |
| !!! | GATATTTGGTGGTCACTTTT+GGG | - | chr4_4:35660735-35660754 | Msa0678860:intron | 35.0% |
| !!! | ATATTTGGTGGTCACTTTTG+GGG | - | chr4_4:35660736-35660755 | Msa0678860:intron | 35.0% |
| AGTTAAGAAAAGGAATGCAG+AGG | - | chr4_4:35660797-35660816 | Msa0678860:intron | 35.0% | |
| AAGAGGATGTTGAAAAAGGT+TGG | - | chr4_4:35660897-35660916 | Msa0678860:intron | 35.0% | |
| GTAACACAAGTATCAGGAAT+TGG | + | chr4_4:35660939-35660958 | None:intergenic | 35.0% | |
| CAAACAGTAACACAAGTATC+AGG | + | chr4_4:35660945-35660964 | None:intergenic | 35.0% | |
| ! | GATACTTGTGTTACTGTTTG+TGG | - | chr4_4:35660945-35660964 | Msa0678860:intron | 35.0% |
| ACCAACATCAAGTACCTAAT+TGG | - | chr4_4:35661021-35661040 | Msa0678860:intron | 35.0% | |
| TCCAATTAGGTACTTGATGT+TGG | + | chr4_4:35661025-35661044 | None:intergenic | 35.0% | |
| ! | AGACATGTGTCATTCCAATT+AGG | + | chr4_4:35661038-35661057 | None:intergenic | 35.0% |
| ATTGGAATGACACATGTCTT+AGG | - | chr4_4:35661039-35661058 | Msa0678860:five_prime_UTR | 35.0% | |
| AGAATGGAAGTGAAACTAAC+CGG | + | chr4_4:35659726-35659745 | None:intergenic | 35.0% | |
| AAGGAACGAAAATGGAAGAA+TGG | + | chr4_4:35659742-35659761 | None:intergenic | 35.0% | |
| GAAATGGAAAGGAACGAAAA+TGG | + | chr4_4:35659750-35659769 | None:intergenic | 35.0% | |
| GATAGAAGGAAGAAATGGAA+AGG | + | chr4_4:35659761-35659780 | None:intergenic | 35.0% | |
| AGCAAGATAGAAGGAAGAAA+TGG | + | chr4_4:35659766-35659785 | None:intergenic | 35.0% | |
| TTTCAAAATAGTCCGGATTG+TGG | - | chr4_4:35660197-35660216 | Msa0678860:intron | 35.0% | |
| TGATTACTCGTTACACATTC+AGG | - | chr4_4:35660432-35660451 | Msa0678860:intron | 35.0% | |
| GATTACTCGTTACACATTCA+GGG | - | chr4_4:35660433-35660452 | Msa0678860:intron | 35.0% | |
| TAAAATAGTCACAGTGCCAT+TGG | + | chr4_4:35660510-35660529 | None:intergenic | 35.0% | |
| !!! | AACTGGGTTGTTTGTTTTGT+TGG | - | chr4_4:35660645-35660664 | Msa0678860:intron | 35.0% |
| !!! | ACTGGGTTGTTTGTTTTGTT+GGG | - | chr4_4:35660646-35660665 | Msa0678860:intron | 35.0% |
| AAGTTGTGTAGTATCAGAGA+TGG | - | chr4_4:35660710-35660729 | Msa0678860:intron | 35.0% | |
| AGTTGTGTAGTATCAGAGAT+GGG | - | chr4_4:35660711-35660730 | Msa0678860:intron | 35.0% | |
| TATCAGAGATGGGAGATATT+TGG | - | chr4_4:35660721-35660740 | Msa0678860:intron | 35.0% | |
| !! | AGATATTTGGTGGTCACTTT+TGG | - | chr4_4:35660734-35660753 | Msa0678860:intron | 35.0% |
| !!! | GATATTTGGTGGTCACTTTT+GGG | - | chr4_4:35660735-35660754 | Msa0678860:intron | 35.0% |
| !!! | ATATTTGGTGGTCACTTTTG+GGG | - | chr4_4:35660736-35660755 | Msa0678860:intron | 35.0% |
| AGTTAAGAAAAGGAATGCAG+AGG | - | chr4_4:35660797-35660816 | Msa0678860:intron | 35.0% | |
| AAGAGGATGTTGAAAAAGGT+TGG | - | chr4_4:35660897-35660916 | Msa0678860:intron | 35.0% | |
| GTAACACAAGTATCAGGAAT+TGG | + | chr4_4:35660939-35660958 | None:intergenic | 35.0% | |
| CAAACAGTAACACAAGTATC+AGG | + | chr4_4:35660945-35660964 | None:intergenic | 35.0% | |
| ! | GATACTTGTGTTACTGTTTG+TGG | - | chr4_4:35660945-35660964 | Msa0678860:intron | 35.0% |
| ACCAACATCAAGTACCTAAT+TGG | - | chr4_4:35661021-35661040 | Msa0678860:intron | 35.0% | |
| TCCAATTAGGTACTTGATGT+TGG | + | chr4_4:35661025-35661044 | None:intergenic | 35.0% | |
| ! | AGACATGTGTCATTCCAATT+AGG | + | chr4_4:35661038-35661057 | None:intergenic | 35.0% |
| ATTGGAATGACACATGTCTT+AGG | - | chr4_4:35661039-35661058 | Msa0678860:five_prime_UTR | 35.0% | |
| GACTAACATAGTCCACAATC+CGG | + | chr4_4:35660212-35660231 | None:intergenic | 40.0% | |
| TCGTTAGTCAAAATAGTCCC+TGG | + | chr4_4:35660365-35660384 | None:intergenic | 40.0% | |
| !!! | AGGGACTATTTTGACTAACG+AGG | - | chr4_4:35660364-35660383 | Msa0678860:intron | 40.0% |
| TCGTTGTGTATTGTGTTGTG+TGG | - | chr4_4:35660586-35660605 | Msa0678860:intron | 40.0% | |
| TGTGTATTGTGTTGTGTGGT+TGG | - | chr4_4:35660590-35660609 | Msa0678860:intron | 40.0% | |
| !!! | TATTTGGTGGTCACTTTTGG+GGG | - | chr4_4:35660737-35660756 | Msa0678860:intron | 40.0% |
| GACTAACATAGTCCACAATC+CGG | + | chr4_4:35660212-35660231 | None:intergenic | 40.0% | |
| TCGTTAGTCAAAATAGTCCC+TGG | + | chr4_4:35660365-35660384 | None:intergenic | 40.0% | |
| !!! | AGGGACTATTTTGACTAACG+AGG | - | chr4_4:35660364-35660383 | Msa0678860:intron | 40.0% |
| TCGTTGTGTATTGTGTTGTG+TGG | - | chr4_4:35660586-35660605 | Msa0678860:intron | 40.0% | |
| TGTGTATTGTGTTGTGTGGT+TGG | - | chr4_4:35660590-35660609 | Msa0678860:intron | 40.0% | |
| !!! | TATTTGGTGGTCACTTTTGG+GGG | - | chr4_4:35660737-35660756 | Msa0678860:intron | 40.0% |
| ATGGAAGTGAAACTAACCGG+CGG | + | chr4_4:35659723-35659742 | None:intergenic | 45.0% | |
| !!! | TGAGGGATTGTTTTAACGCC+AGG | - | chr4_4:35660344-35660363 | Msa0678860:intron | 45.0% |
| !!! | GAGGGATTGTTTTAACGCCA+GGG | - | chr4_4:35660345-35660364 | Msa0678860:intron | 45.0% |
| GAATTCGAACTCCGTCTCTT+AGG | - | chr4_4:35660545-35660564 | Msa0678860:intron | 45.0% | |
| CAGAGATGGGAGATATTTGG+TGG | - | chr4_4:35660724-35660743 | Msa0678860:intron | 45.0% | |
| AAAGGAATGCAGAGGAGCAA+AGG | - | chr4_4:35660805-35660824 | Msa0678860:intron | 45.0% | |
| ! | AGCAAAGGTTGAAGAGTGCA+AGG | - | chr4_4:35660820-35660839 | Msa0678860:intron | 45.0% |
| ! | GCAAAGGTTGAAGAGTGCAA+GGG | - | chr4_4:35660821-35660840 | Msa0678860:intron | 45.0% |
| ! | CAAAGGTTGAAGAGTGCAAG+GGG | - | chr4_4:35660822-35660841 | Msa0678860:intron | 45.0% |
| AAAGGGTCTGCACTTCAAAG+AGG | - | chr4_4:35660880-35660899 | Msa0678860:intron | 45.0% | |
| GGAATGACACATGTCTTAGG+AGG | - | chr4_4:35661042-35661061 | Msa0678860:five_prime_UTR | 45.0% | |
| ACTCTCTTCTCAGTCTTCTC+AGG | - | chr4_4:35661085-35661104 | Msa0678860:five_prime_UTR | 45.0% | |
| ATGGAAGTGAAACTAACCGG+CGG | + | chr4_4:35659723-35659742 | None:intergenic | 45.0% | |
| !!! | TGAGGGATTGTTTTAACGCC+AGG | - | chr4_4:35660344-35660363 | Msa0678860:intron | 45.0% |
| !!! | GAGGGATTGTTTTAACGCCA+GGG | - | chr4_4:35660345-35660364 | Msa0678860:intron | 45.0% |
| GAATTCGAACTCCGTCTCTT+AGG | - | chr4_4:35660545-35660564 | Msa0678860:intron | 45.0% | |
| CAGAGATGGGAGATATTTGG+TGG | - | chr4_4:35660724-35660743 | Msa0678860:intron | 45.0% | |
| AAAGGAATGCAGAGGAGCAA+AGG | - | chr4_4:35660805-35660824 | Msa0678860:intron | 45.0% | |
| ! | AGCAAAGGTTGAAGAGTGCA+AGG | - | chr4_4:35660820-35660839 | Msa0678860:intron | 45.0% |
| ! | GCAAAGGTTGAAGAGTGCAA+GGG | - | chr4_4:35660821-35660840 | Msa0678860:intron | 45.0% |
| ! | CAAAGGTTGAAGAGTGCAAG+GGG | - | chr4_4:35660822-35660841 | Msa0678860:intron | 45.0% |
| AAAGGGTCTGCACTTCAAAG+AGG | - | chr4_4:35660880-35660899 | Msa0678860:intron | 45.0% | |
| GGAATGACACATGTCTTAGG+AGG | - | chr4_4:35661042-35661061 | Msa0678860:five_prime_UTR | 45.0% | |
| !! | TATTATATTTATATAGTTTA+AGG | - | chr4_4:35660101-35660120 | Msa0678860:intron | 5.0% |
| !! | TATTATATTTATATAGTTTA+AGG | - | chr4_4:35660101-35660120 | Msa0678860:intron | 5.0% |
| CTTGTCCTGCAACAACGACA+GGG | + | chr4_4:35660770-35660789 | None:intergenic | 50.0% | |
| AGAGTGCAAGGGGAAGAGAA+AGG | - | chr4_4:35660832-35660851 | Msa0678860:intron | 50.0% | |
| TGCTGAAGCTTGTGCTCGTA+CGG | - | chr4_4:35660989-35661008 | Msa0678860:intron | 50.0% | |
| CTTGTCCTGCAACAACGACA+GGG | + | chr4_4:35660770-35660789 | None:intergenic | 50.0% | |
| AGAGTGCAAGGGGAAGAGAA+AGG | - | chr4_4:35660832-35660851 | Msa0678860:intron | 50.0% | |
| TGCTGAAGCTTGTGCTCGTA+CGG | - | chr4_4:35660989-35661008 | Msa0678860:intron | 50.0% | |
| GAAGTGAAACTAACCGGCGG+TGG | + | chr4_4:35659720-35659739 | None:intergenic | 55.0% | |
| GCTTGTCCTGCAACAACGAC+AGG | + | chr4_4:35660771-35660790 | None:intergenic | 55.0% | |
| GAAGTGAAACTAACCGGCGG+TGG | + | chr4_4:35659720-35659739 | None:intergenic | 55.0% | |
| GCTTGTCCTGCAACAACGAC+AGG | + | chr4_4:35660771-35660790 | None:intergenic | 55.0% | |
| !! | GGTGGCGGAGAAAGAGAAGG+CGG | + | chr4_4:35659702-35659721 | None:intergenic | 60.0% |
| TTCTCTTTCTCCGCCACCGC+CGG | - | chr4_4:35659704-35659723 | Msa0678860:CDS | 60.0% | |
| GTGAAACTAACCGGCGGTGG+CGG | + | chr4_4:35659717-35659736 | None:intergenic | 60.0% | |
| GCAGTCCCTGTCGTTGTTGC+AGG | - | chr4_4:35660762-35660781 | Msa0678860:intron | 60.0% | |
| !! | GGTGGCGGAGAAAGAGAAGG+CGG | + | chr4_4:35659702-35659721 | None:intergenic | 60.0% |
| TTCTCTTTCTCCGCCACCGC+CGG | - | chr4_4:35659704-35659723 | Msa0678860:CDS | 60.0% | |
| GTGAAACTAACCGGCGGTGG+CGG | + | chr4_4:35659717-35659736 | None:intergenic | 60.0% | |
| GCAGTCCCTGTCGTTGTTGC+AGG | - | chr4_4:35660762-35660781 | Msa0678860:intron | 60.0% | |
| !! | GGCGGTGGCGGAGAAAGAGA+AGG | + | chr4_4:35659705-35659724 | None:intergenic | 65.0% |
| !! | GGCGGTGGCGGAGAAAGAGA+AGG | + | chr4_4:35659705-35659724 | None:intergenic | 65.0% |
| Chromosome | Type | Strat | End | Strand | Name |
|---|---|---|---|---|---|
| chr4_4 | gene | 35659644 | 35661106 | 35659644 | ID=Msa0678860;Name=Msa0678860 |
| chr4_4 | mRNA | 35659644 | 35661106 | 35659644 | ID=Msa0678860-mRNA-1;Parent=Msa0678860;Name=Msa0678860-mRNA-1;_AED=0.18;_eAED=0.20;_QI=90|0|0.5|1|0|0|2|0|126 |
| chr4_4 | exon | 35659644 | 35660029 | 35659644 | ID=Msa0678860-mRNA-1:exon:8460;Parent=Msa0678860-mRNA-1 |
| chr4_4 | exon | 35661025 | 35661106 | 35661025 | ID=Msa0678860-mRNA-1:exon:8459;Parent=Msa0678860-mRNA-1 |
| chr4_4 | five_prime_UTR | 35661025 | 35661106 | 35661025 | ID=Msa0678860-mRNA-1:five_prime_utr;Parent=Msa0678860-mRNA-1 |
| chr4_4 | five_prime_UTR | 35660022 | 35660029 | 35660022 | ID=Msa0678860-mRNA-1:five_prime_utr;Parent=Msa0678860-mRNA-1 |
| chr4_4 | CDS | 35659644 | 35660021 | 35659644 | ID=Msa0678860-mRNA-1:cds;Parent=Msa0678860-mRNA-1 |
| Gene Sequence |
| Protein sequence |
