Alfalfa Gene Editing Database
Alfalfa Gene Editing Database
| Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa0510440 | XP_013460899.1 | 96.364 | 110 | 4 | 0 | 1 | 110 | 1 | 110 | 2.27e-71 | 218 |
| Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa0510440 | sp|Q7XI45|DTM1_ORYSJ | 44.144 | 111 | 60 | 1 | 1 | 109 | 1 | 111 | 7.78e-20 | 80.5 |
| Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa0510440 | A0A072V0P5 | 96.364 | 110 | 4 | 0 | 1 | 110 | 1 | 110 | 1.09e-71 | 218 |
| Gene ID | Type | Classification |
|---|
| Gene ID | Type | Classification |
|---|
Co-expression Network
| Gene1 | Gene2 | correlation coefficient | p_value | FDR |
|---|---|---|---|---|
| Msa0001950 | Msa0510440 | 0.811880 | 5.609694e-51 | -8.615850e-47 |
| Msa0003470 | Msa0510440 | 0.850094 | 2.119817e-60 | -8.615850e-47 |
| Msa0004360 | Msa0510440 | 0.811453 | 6.947539e-51 | -8.615850e-47 |
| Msa0017120 | Msa0510440 | 0.832369 | 9.833764e-56 | -8.615850e-47 |
| Msa0017940 | Msa0510440 | 0.809198 | 2.129937e-50 | -8.615850e-47 |
| Msa0024680 | Msa0510440 | 0.809047 | 2.294651e-50 | -8.615850e-47 |
| Msa0027540 | Msa0510440 | 0.829612 | 4.669903e-55 | -8.615850e-47 |
| Msa0030000 | Msa0510440 | 0.811763 | 5.950469e-51 | -8.615850e-47 |
| Msa0030310 | Msa0510440 | 0.814043 | 1.882929e-51 | -8.615850e-47 |
| Msa0030730 | Msa0510440 | 0.803838 | 2.879054e-49 | -8.615850e-47 |
| Msa0032120 | Msa0510440 | 0.805196 | 1.499863e-49 | -8.615850e-47 |
| Msa0032400 | Msa0510440 | 0.800642 | 1.309529e-48 | -8.615850e-47 |
| Msa0041540 | Msa0510440 | 0.825861 | 3.719916e-54 | -8.615850e-47 |
| Msa0053110 | Msa0510440 | 0.801604 | 8.324741e-49 | -8.615850e-47 |
| Msa0065390 | Msa0510440 | 0.826602 | 2.479017e-54 | -8.615850e-47 |
| Msa0075310 | Msa0510440 | 0.826904 | 2.100320e-54 | -8.615850e-47 |
| Msa0077410 | Msa0510440 | 0.815580 | 8.594164e-52 | -8.615850e-47 |
| Msa0079250 | Msa0510440 | 0.801302 | 9.600186e-49 | -8.615850e-47 |
| Msa0084680 | Msa0510440 | 0.823363 | 1.442364e-53 | -8.615850e-47 |
| Msa0089210 | Msa0510440 | 0.818729 | 1.683693e-52 | -8.615850e-47 |
| Msa0092730 | Msa0510440 | 0.802771 | 4.789046e-49 | -8.615850e-47 |
| Msa0110710 | Msa0510440 | 0.823606 | 1.265174e-53 | -8.615850e-47 |
| Msa0113160 | Msa0510440 | 0.814312 | 1.642427e-51 | -8.615850e-47 |
| Msa0120330 | Msa0510440 | 0.815131 | 1.081719e-51 | -8.615850e-47 |
| Msa0125230 | Msa0510440 | 0.821186 | 4.615880e-53 | -8.615850e-47 |
| Msa0134130 | Msa0510440 | 0.815401 | 9.420380e-52 | -8.615850e-47 |
| Msa0135980 | Msa0510440 | 0.835045 | 2.108861e-56 | -8.615850e-47 |
| Msa0139900 | Msa0510440 | 0.804042 | 2.611290e-49 | -8.615850e-47 |
| Msa0141830 | Msa0510440 | 0.831709 | 1.431447e-55 | -8.615850e-47 |
| Msa0143080 | Msa0510440 | 0.840083 | 1.076786e-57 | -8.615850e-47 |
| Msa0143970 | Msa0510440 | 0.809499 | 1.835889e-50 | -8.615850e-47 |
| Msa0145950 | Msa0510440 | 0.803618 | 3.199170e-49 | -8.615850e-47 |
| Msa0146020 | Msa0510440 | 0.833823 | 4.273244e-56 | -8.615850e-47 |
| Msa0146470 | Msa0510440 | 0.832717 | 8.059795e-56 | -8.615850e-47 |
| Msa0157020 | Msa0510440 | 0.828437 | 8.995049e-55 | -8.615850e-47 |
| Msa0159560 | Msa0510440 | 0.808232 | 3.426293e-50 | -8.615850e-47 |
| Msa0168100 | Msa0510440 | 0.811640 | 6.328081e-51 | -8.615850e-47 |
| Msa0169570 | Msa0510440 | 0.803682 | 3.103213e-49 | -8.615850e-47 |
| Msa0172960 | Msa0510440 | -0.819438 | 1.161449e-52 | -8.615850e-47 |
| Msa0183610 | Msa0510440 | 0.800928 | 1.144980e-48 | -8.615850e-47 |
| Msa0183620 | Msa0510440 | 0.831544 | 1.571488e-55 | -8.615850e-47 |
| Msa0185390 | Msa0510440 | 0.841205 | 5.472626e-58 | -8.615850e-47 |
| Msa0185700 | Msa0510440 | 0.806243 | 9.042546e-50 | -8.615850e-47 |
| Msa0194970 | Msa0510440 | 0.823967 | 1.041564e-53 | -8.615850e-47 |
| Msa0200970 | Msa0510440 | 0.823596 | 1.271861e-53 | -8.615850e-47 |
| Msa0207000 | Msa0510440 | 0.844391 | 7.784099e-59 | -8.615850e-47 |
| Msa0222070 | Msa0510440 | 0.804966 | 1.675687e-49 | -8.615850e-47 |
| Msa0222120 | Msa0510440 | 0.807568 | 4.743045e-50 | -8.615850e-47 |
| Msa0223280 | Msa0510440 | 0.800546 | 1.369722e-48 | -8.615850e-47 |
| Msa0223390 | Msa0510440 | 0.805660 | 1.199145e-49 | -8.615850e-47 |
| Msa0230400 | Msa0510440 | 0.808697 | 2.726972e-50 | -8.615850e-47 |
| Msa0236980 | Msa0510440 | 0.831566 | 1.552100e-55 | -8.615850e-47 |
| Msa0370600 | Msa0510440 | 0.800812 | 1.208898e-48 | -8.615850e-47 |
| Msa0377560 | Msa0510440 | 0.801985 | 6.952981e-49 | -8.615850e-47 |
| Msa0378340 | Msa0510440 | 0.852283 | 5.111789e-61 | -8.615850e-47 |
| Msa0380060 | Msa0510440 | 0.840420 | 8.790799e-58 | -8.615850e-47 |
| Msa0382500 | Msa0510440 | 0.801403 | 9.154085e-49 | -8.615850e-47 |
| Msa0382560 | Msa0510440 | 0.808272 | 3.359802e-50 | -8.615850e-47 |
| Msa0388720 | Msa0510440 | 0.824363 | 8.405717e-54 | -8.615850e-47 |
| Msa0417630 | Msa0510440 | 0.837291 | 5.667709e-57 | -8.615850e-47 |
| Msa0418220 | Msa0510440 | 0.899903 | 1.248899e-77 | -8.615850e-47 |
| Msa0427690 | Msa0510440 | 0.849526 | 3.055305e-60 | -8.615850e-47 |
| Msa0429270 | Msa0510440 | 0.831197 | 1.913392e-55 | -8.615850e-47 |
| Msa0431430 | Msa0510440 | 0.807796 | 4.243023e-50 | -8.615850e-47 |
| Msa0432680 | Msa0510440 | 0.810529 | 1.101902e-50 | -8.615850e-47 |
| Msa0464630 | Msa0510440 | 0.937469 | 3.294378e-98 | -8.615850e-47 |
| Msa0467800 | Msa0510440 | 0.808329 | 3.267404e-50 | -8.615850e-47 |
| Msa0467880 | Msa0510440 | 0.806670 | 7.347347e-50 | -8.615850e-47 |
| Msa0468610 | Msa0510440 | 0.817548 | 3.114604e-52 | -8.615850e-47 |
| Msa0469910 | Msa0510440 | -0.811098 | 8.297060e-51 | -8.615850e-47 |
| Msa0246690 | Msa0510440 | 0.808372 | 3.199776e-50 | -8.615850e-47 |
| Msa0248560 | Msa0510440 | 0.814147 | 1.786028e-51 | -8.615850e-47 |
| Msa0257130 | Msa0510440 | 0.818184 | 2.238054e-52 | -8.615850e-47 |
| Msa0259560 | Msa0510440 | 0.812491 | 4.127627e-51 | -8.615850e-47 |
| Msa0259980 | Msa0510440 | 0.805318 | 1.414660e-49 | -8.615850e-47 |
| Msa0263620 | Msa0510440 | 0.804585 | 2.012889e-49 | -8.615850e-47 |
| Msa0267760 | Msa0510440 | 0.800079 | 1.705036e-48 | -8.615850e-47 |
| Msa0274780 | Msa0510440 | 0.815941 | 7.142184e-52 | -8.615850e-47 |
| Msa0277530 | Msa0510440 | 0.811304 | 7.484382e-51 | -8.615850e-47 |
| Msa0278620 | Msa0510440 | 0.829181 | 5.941146e-55 | -8.615850e-47 |
| Msa0296760 | Msa0510440 | 0.800735 | 1.253911e-48 | -8.615850e-47 |
| Msa0297920 | Msa0510440 | 0.820604 | 6.281500e-53 | -8.615850e-47 |
| Msa0298970 | Msa0510440 | 0.803514 | 3.361321e-49 | -8.615850e-47 |
| Msa0301180 | Msa0510440 | 0.811473 | 6.880619e-51 | -8.615850e-47 |
| Msa0315480 | Msa0510440 | 0.800977 | 1.118884e-48 | -8.615850e-47 |
| Msa0317260 | Msa0510440 | 0.800747 | 1.246639e-48 | -8.615850e-47 |
| Msa0318000 | Msa0510440 | 0.832682 | 8.223296e-56 | -8.615850e-47 |
| Msa0328210 | Msa0510440 | 0.834480 | 2.925698e-56 | -8.615850e-47 |
| Msa0339860 | Msa0510440 | 0.817537 | 3.132662e-52 | -8.615850e-47 |
| Msa0344640 | Msa0510440 | 0.807745 | 4.350490e-50 | -8.615850e-47 |
| Msa0485280 | Msa0510440 | 0.809136 | 2.196375e-50 | -8.615850e-47 |
| Msa0508400 | Msa0510440 | 0.819090 | 1.393623e-52 | -8.615850e-47 |
| Msa0510440 | Msa0514490 | 0.813069 | 3.084322e-51 | -8.615850e-47 |
| Msa0510440 | Msa0518520 | 0.852047 | 5.962991e-61 | -8.615850e-47 |
| Msa0510440 | Msa0519200 | 0.853812 | 1.865164e-61 | -8.615850e-47 |
| Msa0510440 | Msa0520320 | 0.812337 | 4.461543e-51 | -8.615850e-47 |
| Msa0510440 | Msa0524090 | 0.821440 | 4.032206e-53 | -8.615850e-47 |
| Msa0510440 | Msa0524120 | 0.832030 | 1.192655e-55 | -8.615850e-47 |
| Msa0510440 | Msa0527590 | 0.809121 | 2.213126e-50 | -8.615850e-47 |
| Msa0510440 | Msa0532840 | 0.821588 | 3.727809e-53 | -8.615850e-47 |
| Msa0510440 | Msa0533010 | 0.816787 | 4.619720e-52 | -8.615850e-47 |
| Msa0510440 | Msa0538570 | 0.851805 | 6.984144e-61 | -8.615850e-47 |
| Msa0510440 | Msa0543850 | 0.806441 | 8.214377e-50 | -8.615850e-47 |
| Msa0510440 | Msa0544220 | 0.810537 | 1.097076e-50 | -8.615850e-47 |
| Msa0510440 | Msa0546380 | 0.815428 | 9.290336e-52 | -8.615850e-47 |
| Msa0510440 | Msa0546740 | 0.836464 | 9.217960e-57 | -8.615850e-47 |
| Msa0510440 | Msa0547050 | 0.839868 | 1.225083e-57 | -8.615850e-47 |
| Msa0510440 | Msa0560470 | 0.812223 | 4.723143e-51 | -8.615850e-47 |
| Msa0510440 | Msa0561510 | 0.807713 | 4.419163e-50 | -8.615850e-47 |
| Msa0510440 | Msa0581460 | 0.807362 | 5.246934e-50 | -8.615850e-47 |
| Msa0510440 | Msa0590680 | 0.824888 | 6.324672e-54 | -8.615850e-47 |
| Msa0510440 | Msa0594390 | 0.836824 | 7.462253e-57 | -8.615850e-47 |
| Msa0510440 | Msa0600390 | 0.828559 | 8.406898e-55 | -8.615850e-47 |
| Msa0510440 | Msa0601780 | 0.809646 | 1.707507e-50 | -8.615850e-47 |
| Msa0510440 | Msa0607280 | 0.803111 | 4.074346e-49 | -8.615850e-47 |
| Msa0510440 | Msa0607500 | 0.828705 | 7.747641e-55 | -8.615850e-47 |
| Msa0510440 | Msa0614230 | 0.836331 | 9.962279e-57 | -8.615850e-47 |
| Msa0510440 | Msa0619330 | 0.816564 | 5.183130e-52 | -8.615850e-47 |
| Msa0510440 | Msa0619980 | 0.808644 | 2.798895e-50 | -8.615850e-47 |
| Msa0510440 | Msa0633750 | 0.830855 | 2.321525e-55 | -8.615850e-47 |
| Msa0510440 | Msa0634270 | 0.814008 | 1.917321e-51 | -8.615850e-47 |
| Msa0510440 | Msa0638690 | 0.837247 | 5.815793e-57 | -8.615850e-47 |
| Msa0510440 | Msa0638710 | 0.822399 | 2.418322e-53 | -8.615850e-47 |
| Msa0510440 | Msa0639120 | 0.815386 | 9.492927e-52 | -8.615850e-47 |
| Msa0510440 | Msa0640880 | 0.848002 | 8.088707e-60 | -8.615850e-47 |
| Msa0510440 | Msa0640990 | 0.812571 | 3.964858e-51 | -8.615850e-47 |
| Msa0510440 | Msa0642650 | 0.856377 | 3.352419e-62 | -8.615850e-47 |
| Msa0510440 | Msa0642910 | 0.819942 | 8.911651e-53 | -8.615850e-47 |
| Msa0510440 | Msa0654060 | 0.807480 | 4.952740e-50 | -8.615850e-47 |
| Msa0510440 | Msa0654540 | 0.802752 | 4.834007e-49 | -8.615850e-47 |
| Msa0510440 | Msa0667220 | 0.827342 | 1.649585e-54 | -8.615850e-47 |
| Msa0510440 | Msa0678860 | 0.813085 | 3.059451e-51 | -8.615850e-47 |
| Msa0510440 | Msa0678890 | 0.819292 | 1.253673e-52 | -8.615850e-47 |
| Msa0510440 | Msa0681890 | 0.868613 | 5.734181e-66 | -8.615850e-47 |
| Msa0510440 | Msa0686610 | 0.802014 | 6.859048e-49 | -8.615850e-47 |
| Msa0510440 | Msa0690560 | 0.820894 | 5.388034e-53 | -8.615850e-47 |
| Msa0510440 | Msa0696620 | 0.804194 | 2.428534e-49 | -8.615850e-47 |
| Msa0510440 | Msa0703720 | 0.835540 | 1.580821e-56 | -8.615850e-47 |
| Msa0510440 | Msa0703760 | 0.822507 | 2.283055e-53 | -8.615850e-47 |
| Msa0510440 | Msa0709480 | 0.805888 | 1.073710e-49 | -8.615850e-47 |
| Msa0510440 | Msa0720270 | 0.810394 | 1.178117e-50 | -8.615850e-47 |
| Msa0510440 | Msa0725920 | 0.812144 | 4.915062e-51 | -8.615850e-47 |
| Msa0510440 | Msa0730180 | 0.817668 | 2.926849e-52 | -8.615850e-47 |
| Msa0510440 | Msa0740040 | 0.811752 | 5.982971e-51 | -8.615850e-47 |
| Msa0510440 | Msa0747780 | 0.801132 | 1.040315e-48 | -8.615850e-47 |
| Msa0510440 | Msa0766470 | 0.800779 | 1.227925e-48 | -8.615850e-47 |
| Msa0510440 | Msa0772020 | 0.813253 | 2.810468e-51 | -8.615850e-47 |
| Msa0510440 | Msa0775260 | 0.803426 | 3.505185e-49 | -8.615850e-47 |
| Msa0510440 | Msa0787750 | 0.833216 | 6.056003e-56 | -8.615850e-47 |
| Msa0510440 | Msa0799210 | 0.810619 | 1.053663e-50 | -8.615850e-47 |
| Msa0510440 | Msa0803130 | 0.848380 | 6.361212e-60 | -8.615850e-47 |
| Msa0510440 | Msa0810020 | 0.829985 | 3.788341e-55 | -8.615850e-47 |
| Msa0510440 | Msa0841490 | 0.846029 | 2.807875e-59 | -8.615850e-47 |
| Msa0510440 | Msa0846030 | 0.820051 | 8.412304e-53 | -8.615850e-47 |
| Msa0510440 | Msa0850500 | 0.840482 | 8.468752e-58 | -8.615850e-47 |
| Msa0510440 | Msa0852730 | 0.812179 | 4.830223e-51 | -8.615850e-47 |
| Msa0510440 | Msa0863970 | 0.800280 | 1.551694e-48 | -8.615850e-47 |
| Msa0510440 | Msa0872310 | 0.826093 | 3.276929e-54 | -8.615850e-47 |
| Msa0510440 | Msa0874760 | 0.810905 | 9.135139e-51 | -8.615850e-47 |
| Msa0510440 | Msa0877420 | 0.828368 | 9.344306e-55 | -8.615850e-47 |
| Msa0510440 | Msa0878980 | -0.812473 | 4.164542e-51 | -8.615850e-47 |
| Msa0510440 | Msa0890250 | 0.813214 | 2.866280e-51 | -8.615850e-47 |
| Msa0510440 | Msa0903330 | 0.814378 | 1.588525e-51 | -8.615850e-47 |
| Msa0510440 | Msa0905550 | 0.844494 | 7.304470e-59 | -8.615850e-47 |
| Msa0510440 | Msa0907700 | 0.811056 | 8.470761e-51 | -8.615850e-47 |
| Msa0510440 | Msa0922540 | 0.829812 | 4.175079e-55 | -8.615850e-47 |
| Msa0510440 | Msa0925160 | 0.834994 | 2.172047e-56 | -8.615850e-47 |
| Msa0510440 | Msa0930330 | 0.841570 | 4.385503e-58 | -8.615850e-47 |
| Msa0510440 | Msa0931480 | 0.850634 | 1.495857e-60 | -8.615850e-47 |
| Msa0510440 | Msa0931610 | 0.815765 | 7.816604e-52 | -8.615850e-47 |
| Msa0510440 | Msa0937550 | 0.840523 | 8.260790e-58 | -8.615850e-47 |
| Msa0510440 | Msa0942730 | 0.800612 | 1.327944e-48 | -8.615850e-47 |
| Msa0510440 | Msa0951460 | 0.804504 | 2.092575e-49 | -8.615850e-47 |
| Msa0510440 | Msa0951710 | 0.804147 | 2.483613e-49 | -8.615850e-47 |
| Msa0510440 | Msa0955260 | 0.832554 | 8.845997e-56 | -8.615850e-47 |
| Msa0510440 | Msa0958020 | 0.864291 | 1.351842e-64 | -8.615850e-47 |
| Msa0510440 | Msa0974750 | 0.822499 | 2.292717e-53 | -8.615850e-47 |
| Msa0510440 | Msa0979550 | 0.817264 | 3.608617e-52 | -8.615850e-47 |
| Msa0510440 | Msa0990520 | 0.868843 | 4.830188e-66 | -8.615850e-47 |
| Msa0510440 | Msa0992570 | 0.812768 | 3.590242e-51 | -8.615850e-47 |
| Msa0510440 | Msa0992590 | 0.823538 | 1.312587e-53 | -8.615850e-47 |
| Msa0510440 | Msa0996090 | 0.809960 | 1.461519e-50 | -8.615850e-47 |
| Msa0510440 | Msa1002040 | 0.851898 | 6.572560e-61 | -8.615850e-47 |
| Msa0510440 | Msa1004500 | 0.823511 | 1.331662e-53 | -8.615850e-47 |
| Msa0510440 | Msa1004520 | 0.822587 | 2.187452e-53 | -8.615850e-47 |
| Msa0510440 | Msa1007350 | 0.812381 | 4.363904e-51 | -8.615850e-47 |
| Msa0510440 | Msa1014270 | 0.821308 | 4.325626e-53 | -8.615850e-47 |
| Msa0510440 | Msa1018790 | 0.822841 | 1.908574e-53 | -8.615850e-47 |
| Msa0510440 | Msa1038320 | 0.801751 | 7.767645e-49 | -8.615850e-47 |
| Msa0510440 | Msa1044340 | 0.816272 | 6.022300e-52 | -8.615850e-47 |
| Msa0510440 | Msa1046870 | 0.811792 | 5.864020e-51 | -8.615850e-47 |
| Msa0510440 | Msa1055260 | 0.800560 | 1.360943e-48 | -8.615850e-47 |
| Msa0510440 | Msa1061180 | 0.801743 | 7.795169e-49 | -8.615850e-47 |
| Msa0510440 | Msa1061500 | 0.824668 | 7.124404e-54 | -8.615850e-47 |
| Msa0510440 | Msa1061920 | 0.813725 | 2.213234e-51 | -8.615850e-47 |
| Msa0510440 | Msa1073840 | 0.803995 | 2.671625e-49 | -8.615850e-47 |
| Msa0510440 | Msa1089530 | 0.825484 | 4.571824e-54 | -8.615850e-47 |
| Msa0510440 | Msa1103670 | 0.814616 | 1.406965e-51 | -8.615850e-47 |
| Msa0510440 | Msa1106810 | 0.826605 | 2.475406e-54 | -8.615850e-47 |
| Msa0510440 | Msa1107440 | 0.826587 | 2.500018e-54 | -8.615850e-47 |
| Msa0510440 | Msa1112610 | 0.801090 | 1.060635e-48 | -8.615850e-47 |
| Msa0510440 | Msa1122160 | 0.821950 | 3.073648e-53 | -8.615850e-47 |
| Msa0510440 | Msa1125780 | 0.805056 | 1.604716e-49 | -8.615850e-47 |
| Msa0510440 | Msa1125950 | 0.811954 | 5.405185e-51 | -8.615850e-47 |
| Msa0510440 | Msa1134400 | 0.814183 | 1.754160e-51 | -8.615850e-47 |
| Msa0510440 | Msa1136230 | 0.815149 | 1.071958e-51 | -8.615850e-47 |
| Msa0510440 | Msa1147270 | 0.812900 | 3.359772e-51 | -8.615850e-47 |
| Msa0510440 | Msa1150970 | 0.858832 | 6.285173e-63 | -8.615850e-47 |
| Msa0510440 | Msa1159100 | 0.839085 | 1.957046e-57 | -8.615850e-47 |
| Msa0510440 | Msa1160570 | 0.831413 | 1.693326e-55 | -8.615850e-47 |
| Msa0510440 | Msa1166180 | 0.813132 | 2.987859e-51 | -8.615850e-47 |
| Msa0510440 | Msa1166280 | 0.805062 | 1.600164e-49 | -8.615850e-47 |
| Msa0510440 | Msa1171340 | 0.820984 | 5.136745e-53 | -8.615850e-47 |
| Msa0510440 | Msa1175750 | 0.812859 | 3.429740e-51 | -8.615850e-47 |
| Msa0510440 | Msa1197110 | 0.819730 | 9.961096e-53 | -8.615850e-47 |
| Msa0510440 | Msa1200920 | 0.819567 | 1.085492e-52 | -8.615850e-47 |
| Msa0510440 | Msa1210770 | 0.833592 | 4.882514e-56 | -8.615850e-47 |
| Msa0510440 | Msa1211090 | 0.820590 | 6.330185e-53 | -8.615850e-47 |
| Msa0510440 | Msa1215210 | 0.811066 | 8.431081e-51 | -8.615850e-47 |
| Msa0510440 | Msa1219250 | 0.808416 | 3.130349e-50 | -8.615850e-47 |
| Msa0510440 | Msa1220450 | -0.826938 | 2.061297e-54 | -8.615850e-47 |
| Msa0510440 | Msa1220460 | -0.821819 | 3.297215e-53 | -8.615850e-47 |
| Msa0510440 | Msa1220480 | -0.820527 | 6.543881e-53 | -8.615850e-47 |
| Msa0510440 | Msa1223160 | -0.813067 | 3.087386e-51 | -8.615850e-47 |
| Msa0510440 | Msa1223840 | 0.835375 | 1.740619e-56 | -8.615850e-47 |
| Msa0510440 | Msa1224670 | 0.836325 | 9.996730e-57 | -8.615850e-47 |
| Msa0510440 | Msa1235890 | 0.818120 | 2.313016e-52 | -8.615850e-47 |
| Msa0510440 | Msa1237030 | 0.832686 | 8.203687e-56 | -8.615850e-47 |
| Msa0510440 | Msa1249870 | 0.829820 | 4.155038e-55 | -8.615850e-47 |
| Msa0510440 | Msa1250670 | 0.813160 | 2.946509e-51 | -8.615850e-47 |
| Msa0510440 | Msa1263030 | 0.823338 | 1.461529e-53 | -8.615850e-47 |
| Msa0510440 | Msa1265960 | 0.802850 | 4.613954e-49 | -8.615850e-47 |
| Msa0510440 | Msa1271600 | 0.801015 | 1.098979e-48 | -8.615850e-47 |
| Msa0510440 | Msa1272330 | 0.813238 | 2.832544e-51 | -8.615850e-47 |
| Msa0510440 | Msa1284030 | 0.822248 | 2.621506e-53 | -8.615850e-47 |
| Msa0510440 | Msa1288190 | 0.811735 | 6.033217e-51 | -8.615850e-47 |
| Msa0510440 | Msa1307370 | 0.801196 | 1.009435e-48 | -8.615850e-47 |
| Msa0510440 | Msa1315980 | 0.821656 | 3.595352e-53 | -8.615850e-47 |
| Msa0510440 | Msa1323060 | 0.837789 | 4.225263e-57 | -8.615850e-47 |
| Msa0510440 | Msa1337090 | 0.836276 | 1.028965e-56 | -8.615850e-47 |
| Msa0510440 | Msa1341930 | 0.815444 | 9.214391e-52 | -8.615850e-47 |
| Msa0510440 | Msa1350670 | 0.822298 | 2.552935e-53 | -8.615850e-47 |
| Msa0510440 | Msa1352290 | 0.802117 | 6.531727e-49 | -8.615850e-47 |
| Msa0510440 | Msa1354040 | 0.837365 | 5.427855e-57 | -8.615850e-47 |
| Msa0510440 | Msa1358550 | 0.810856 | 9.360582e-51 | -8.615850e-47 |
| Msa0510440 | Msa1365020 | 0.819300 | 1.248468e-52 | -8.615850e-47 |
| Msa0510440 | Msa1365150 | 0.801666 | 8.085732e-49 | -8.615850e-47 |
| Msa0510440 | Msa1365200 | 0.801059 | 1.076407e-48 | -8.615850e-47 |
| Msa0510440 | Msa1365870 | 0.800159 | 1.642393e-48 | -8.615850e-47 |
| Msa0510440 | Msa1367940 | 0.811001 | 8.707300e-51 | -8.615850e-47 |
| Msa0510440 | Msa1373510 | 0.847781 | 9.305682e-60 | -8.615850e-47 |
| Msa0510440 | Msa1376870 | 0.914730 | 1.360349e-84 | -8.615850e-47 |
| Msa0510440 | Msa1381130 | 0.847572 | 1.062096e-59 | -8.615850e-47 |
| Msa0510440 | Msa1382310 | 0.814237 | 1.706669e-51 | -8.615850e-47 |
| Msa0510440 | Msa1382720 | 0.865352 | 6.286580e-65 | -8.615850e-47 |
| Msa0510440 | Msa1390310 | 0.804805 | 1.810762e-49 | -8.615850e-47 |
| Msa0510440 | Msa1398480 | 0.800647 | 1.306711e-48 | -8.615850e-47 |
| Msa0510440 | Msa1405770 | 0.823837 | 1.116936e-53 | -8.615850e-47 |
| Msa0510440 | Msa1412080 | 0.806827 | 6.808965e-50 | -8.615850e-47 |
| Msa0510440 | Msa1419850 | 0.825449 | 4.659668e-54 | -8.615850e-47 |
| Msa0510440 | Msa1434020 | 0.802323 | 5.923884e-49 | -8.615850e-47 |
| Msa0510440 | Msa1435050 | 0.801662 | 8.101216e-49 | -8.615850e-47 |
| Msa0510440 | Msa1439670 | 0.818354 | 2.047536e-52 | -8.615850e-47 |
| Msa0510440 | Msa1444450 | 0.840697 | 7.438825e-58 | -8.615850e-47 |
| Msa0510440 | Msa1449880 | 0.834177 | 3.485409e-56 | -8.615850e-47 |
| Msa0510440 | Msa1461820 | 0.801446 | 8.970830e-49 | -8.615850e-47 |
| Msa0510440 | Msa1464560 | 0.800470 | 1.420056e-48 | -8.615850e-47 |
PPI
| Gene1 | Gene2 | Type |
|---|
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa0510440 | MtrunA17_Chr3g0115811 | 96.364 | 110 | 4 | 0 | 1 | 110 | 1 | 110 | 2.09e-75 | 218 |
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa0510440 | AT1G34640.1 | 54.545 | 110 | 49 | 1 | 1 | 110 | 1 | 109 | 4.94e-34 | 114 |
Find 47 sgRNAs with CRISPR-Local
Find 242 sgRNAs with CRISPR-GE
CRISPR-Local
| sgRNA_sequence | on_target_score | Position | Region |
|---|---|---|---|
| TTGGGTATTGTTGGAATTTC+TGG | 0.095978 | 3_4:+59482331 | Msa0510440:CDS |
| TTGATTCAATTTGTTTAATT+TGG | 0.106463 | 3_4:+59483757 | Msa0510440:three_prime_UTR |
| TTTAACTTAATTGTTGATTT+TGG | 0.162503 | 3_4:-59482140 | None:intergenic |
| ACTTTGATGGCATATGAAAA+TGG | 0.232248 | 3_4:-59483868 | None:intergenic |
| TTTCCTAAAGTCTATAATAT+TGG | 0.275231 | 3_4:+59482172 | Msa0510440:five_prime_UTR |
| ATTGTTTATACCGTGGTATA+TGG | 0.321881 | 3_4:+59483631 | Msa0510440:CDS |
| TCTATCAGGAAGAATCAAAT+TGG | 0.325828 | 3_4:-59483942 | None:intergenic |
| GAAAGTATAAAGAAAGAATA+TGG | 0.333215 | 3_4:-59483722 | None:intergenic |
| CAACTTGTGCTAGACTTTGA+TGG | 0.337336 | 3_4:-59483881 | None:intergenic |
| CAACCAATATTATAGACTTT+AGG | 0.344691 | 3_4:-59482175 | None:intergenic |
| GATCTTTCCTCAACAGTAAC+AGG | 0.350655 | 3_4:-59482409 | None:intergenic |
| CTTTGATGGCATATGAAAAT+GGG | 0.380874 | 3_4:-59483867 | None:intergenic |
| TTGGCTGGCAGCAGTTATAT+TGG | 0.382907 | 3_4:+59482258 | Msa0510440:CDS |
| AAATGGTGGAAGTATGTATC+TGG | 0.404668 | 3_4:+59483667 | Msa0510440:CDS |
| AAAATGAGGATATTTCTATC+AGG | 0.418958 | 3_4:-59483956 | None:intergenic |
| ACCTATGTGTTGGGTATTGT+TGG | 0.449040 | 3_4:+59482322 | Msa0510440:CDS |
| AGTGGCCATGCTTACAATTA+CGG | 0.449497 | 3_4:-59482105 | None:intergenic |
| TCCTCAACAGTAACAGGATA+AGG | 0.457912 | 3_4:-59482403 | None:intergenic |
| ATGTTCGTTACCTATGTGTT+GGG | 0.458889 | 3_4:+59482313 | Msa0510440:CDS |
| CGGTTGAAATAATCCCAATC+AGG | 0.486481 | 3_4:-59482364 | None:intergenic |
| TCAGCAGCTTCTCTTTCTCA+TGG | 0.490405 | 3_4:+59482430 | Msa0510440:CDS |
| CTCTAAGAACCTCTATACTT+TGG | 0.491621 | 3_4:+59482239 | Msa0510440:CDS |
| ATGGATATGCTATTTACAAA+TGG | 0.496079 | 3_4:+59483650 | Msa0510440:CDS |
| GCCTTATCCTGTTACTGTTG+AGG | 0.496290 | 3_4:+59482402 | Msa0510440:CDS |
| GCAGCAGTTATATTGGTAGT+TGG | 0.498983 | 3_4:+59482265 | Msa0510440:CDS |
| AAGAACCTCTATACTTTGGC+TGG | 0.505897 | 3_4:+59482243 | Msa0510440:CDS |
| CTAAAGTCTATAATATTGGT+TGG | 0.508456 | 3_4:+59482176 | Msa0510440:five_prime_UTR |
| GATGTTCGTTACCTATGTGT+TGG | 0.512795 | 3_4:+59482312 | Msa0510440:CDS |
| TAGAGCTGCATCATTTGCCA+TGG | 0.517008 | 3_4:-59482221 | None:intergenic |
| TGCTGCCAGCCAAAGTATAG+AGG | 0.518224 | 3_4:-59482248 | None:intergenic |
| GTTTACATGTTCTCCTCTGA+GGG | 0.520969 | 3_4:+59483606 | Msa0510440:CDS |
| GGTTTACATGTTCTCCTCTG+AGG | 0.536710 | 3_4:+59483605 | Msa0510440:intron |
| CATGCTTACAATTACGGTAG+TGG | 0.548361 | 3_4:-59482099 | None:intergenic |
| CACTACCGTAATTGTAAGCA+TGG | 0.564352 | 3_4:+59482100 | Msa0510440:five_prime_UTR |
| GATATGCTATTTACAAATGG+TGG | 0.584585 | 3_4:+59483653 | Msa0510440:CDS |
| TTACAATTACGGTAGTGGTA+AGG | 0.588978 | 3_4:-59482094 | None:intergenic |
| CTTGTCGATAATCACTGTTG+TGG | 0.600841 | 3_4:-59483793 | None:intergenic |
| TCAACCGTGATATTTCTCGT+TGG | 0.602906 | 3_4:+59482380 | Msa0510440:CDS |
| CACAACAGTGATTATCGACA+AGG | 0.616326 | 3_4:+59483794 | Msa0510440:three_prime_UTR |
| GAGGGTGATTGTTTATACCG+TGG | 0.633740 | 3_4:+59483624 | Msa0510440:CDS |
| TGTGCGAGTGTTGTAAACTC+TGG | 0.636513 | 3_4:+59483917 | Msa0510440:three_prime_UTR |
| TTTGATGGCATATGAAAATG+GGG | 0.641442 | 3_4:-59483866 | None:intergenic |
| TCCAACAATACCCAACACAT+AGG | 0.663389 | 3_4:-59482323 | None:intergenic |
| TATCAATCTCATCACAACCA+TGG | 0.667626 | 3_4:+59482204 | Msa0510440:exon |
| AAGGCCAACGAGAAATATCA+CGG | 0.673257 | 3_4:-59482384 | None:intergenic |
| GTATAAACAATCACCCTCAG+AGG | 0.703555 | 3_4:-59483619 | None:intergenic |
| AATAGCATATCCATATACCA+CGG | 0.722953 | 3_4:-59483641 | None:intergenic |
CRISPR-GE
| badsite warning | sgRNA_sequence | Strand | Position | Region | GC_content |
|---|---|---|---|---|---|
| !! | AAAGAATATAAATGAATTAA+GGG | - | chr3_4:59482477-59482496 | None:intergenic | 10.0% |
| !! | TAAAGAATATAAATGAATTA+AGG | - | chr3_4:59482478-59482497 | None:intergenic | 10.0% |
| !!! | AAAATAATTTGTTAAAATGT+TGG | + | chr3_4:59482920-59482939 | Msa0510440:intron | 10.0% |
| !! | AAAGAATATAAATGAATTAA+GGG | - | chr3_4:59482477-59482496 | None:intergenic | 10.0% |
| !! | TAAAGAATATAAATGAATTA+AGG | - | chr3_4:59482478-59482497 | None:intergenic | 10.0% |
| !!! | AAAATAATTTGTTAAAATGT+TGG | + | chr3_4:59482920-59482939 | Msa0510440:intron | 10.0% |
| !!! | TTTAACTTAATTGTTGATTT+TGG | - | chr3_4:59482143-59482162 | None:intergenic | 15.0% |
| !!! | ACTTATACTTTTTATATTTG+TGG | + | chr3_4:59483352-59483371 | Msa0510440:intron | 15.0% |
| !! | GTGTTATAAAATAAAATTGA+TGG | + | chr3_4:59483548-59483567 | Msa0510440:intron | 15.0% |
| !!! | TTGATTCAATTTGTTTAATT+TGG | + | chr3_4:59483757-59483776 | Msa0510440:three_prime_UTR | 15.0% |
| !!! | TTTAACTTAATTGTTGATTT+TGG | - | chr3_4:59482143-59482162 | None:intergenic | 15.0% |
| !!! | ACTTATACTTTTTATATTTG+TGG | + | chr3_4:59483352-59483371 | Msa0510440:intron | 15.0% |
| !! | GTGTTATAAAATAAAATTGA+TGG | + | chr3_4:59483548-59483567 | Msa0510440:intron | 15.0% |
| !!! | TTGATTCAATTTGTTTAATT+TGG | + | chr3_4:59483757-59483776 | Msa0510440:three_prime_UTR | 15.0% |
| !! | TTTCCTAAAGTCTATAATAT+TGG | + | chr3_4:59482172-59482191 | Msa0510440:five_prime_UTR | 20.0% |
| !! | TATACTTTGACAAAGAAAAA+TGG | + | chr3_4:59482769-59482788 | Msa0510440:intron | 20.0% |
| !! | ATTATGAGATGAATATTAGA+AGG | + | chr3_4:59482878-59482897 | Msa0510440:intron | 20.0% |
| !!! | CTAAGGAAACAAAATAATTT+TGG | - | chr3_4:59483081-59483100 | None:intergenic | 20.0% |
| !!! | ATTTTGTTTCCTTAGTAATT+AGG | + | chr3_4:59483086-59483105 | Msa0510440:intron | 20.0% |
| !! | AAAAGATTCATTTATAGTCA+AGG | - | chr3_4:59483177-59483196 | None:intergenic | 20.0% |
| !! | AAGACATTCGAATAATTAAA+AGG | + | chr3_4:59483218-59483237 | Msa0510440:intron | 20.0% |
| !! | AGACATTCGAATAATTAAAA+GGG | + | chr3_4:59483219-59483238 | Msa0510440:intron | 20.0% |
| !! | TAGATCTTCAATAAGATTTA+GGG | + | chr3_4:59483477-59483496 | Msa0510440:intron | 20.0% |
| !!! | GAAAGTATAAAGAAAGAATA+TGG | - | chr3_4:59483725-59483744 | None:intergenic | 20.0% |
| !! | TTTCCTAAAGTCTATAATAT+TGG | + | chr3_4:59482172-59482191 | Msa0510440:five_prime_UTR | 20.0% |
| !! | TATACTTTGACAAAGAAAAA+TGG | + | chr3_4:59482769-59482788 | Msa0510440:intron | 20.0% |
| !! | ATTATGAGATGAATATTAGA+AGG | + | chr3_4:59482878-59482897 | Msa0510440:intron | 20.0% |
| !!! | CTAAGGAAACAAAATAATTT+TGG | - | chr3_4:59483081-59483100 | None:intergenic | 20.0% |
| !!! | ATTTTGTTTCCTTAGTAATT+AGG | + | chr3_4:59483086-59483105 | Msa0510440:intron | 20.0% |
| !! | AAAAGATTCATTTATAGTCA+AGG | - | chr3_4:59483177-59483196 | None:intergenic | 20.0% |
| !! | AAGACATTCGAATAATTAAA+AGG | + | chr3_4:59483218-59483237 | Msa0510440:intron | 20.0% |
| !! | AGACATTCGAATAATTAAAA+GGG | + | chr3_4:59483219-59483238 | Msa0510440:intron | 20.0% |
| !! | TAGATCTTCAATAAGATTTA+GGG | + | chr3_4:59483477-59483496 | Msa0510440:intron | 20.0% |
| !!! | GAAAGTATAAAGAAAGAATA+TGG | - | chr3_4:59483725-59483744 | None:intergenic | 20.0% |
| ! | CAACCAATATTATAGACTTT+AGG | - | chr3_4:59482178-59482197 | None:intergenic | 25.0% |
| ! | CTAAAGTCTATAATATTGGT+TGG | + | chr3_4:59482176-59482195 | Msa0510440:five_prime_UTR | 25.0% |
| ! | GATGAATCAATTTAAATCGA+CGG | + | chr3_4:59482523-59482542 | Msa0510440:intron | 25.0% |
| !! | ATGATTTTGTTGAAGTTTCA+AGG | - | chr3_4:59482598-59482617 | None:intergenic | 25.0% |
| ! | TTGAAACTTCAACAAAATCA+TGG | + | chr3_4:59482597-59482616 | Msa0510440:intron | 25.0% |
| !!! | TTCCATCTAGAGTTTTTTAA+AGG | - | chr3_4:59482652-59482671 | None:intergenic | 25.0% |
| ! | TTTAAAAAACTCTAGATGGA+AGG | + | chr3_4:59482651-59482670 | Msa0510440:intron | 25.0% |
| ! | CTATCTAAACCTAATTACTA+AGG | - | chr3_4:59483098-59483117 | None:intergenic | 25.0% |
| ! | GTAGATCTTCAATAAGATTT+AGG | + | chr3_4:59483476-59483495 | Msa0510440:intron | 25.0% |
| !! | ATGGATATGCTATTTACAAA+TGG | + | chr3_4:59483650-59483669 | Msa0510440:CDS | 25.0% |
| !! | TAATTGTTGAACATGTTTTG+TGG | + | chr3_4:59483691-59483710 | Msa0510440:exon | 25.0% |
| !!! | CTTTTGAGTAGAAAATCAAA+AGG | + | chr3_4:59483824-59483843 | Msa0510440:three_prime_UTR | 25.0% |
| !! | AAAATGAGGATATTTCTATC+AGG | - | chr3_4:59483959-59483978 | None:intergenic | 25.0% |
| ! | CTGTTACATATGTAAAAATG+AGG | - | chr3_4:59483973-59483992 | None:intergenic | 25.0% |
| !!! | CTCATTTTTACATATGTAAC+AGG | + | chr3_4:59483971-59483990 | Msa0510440:three_prime_UTR | 25.0% |
| ! | CAACCAATATTATAGACTTT+AGG | - | chr3_4:59482178-59482197 | None:intergenic | 25.0% |
| ! | CTAAAGTCTATAATATTGGT+TGG | + | chr3_4:59482176-59482195 | Msa0510440:five_prime_UTR | 25.0% |
| ! | GATGAATCAATTTAAATCGA+CGG | + | chr3_4:59482523-59482542 | Msa0510440:intron | 25.0% |
| !! | ATGATTTTGTTGAAGTTTCA+AGG | - | chr3_4:59482598-59482617 | None:intergenic | 25.0% |
| ! | TTGAAACTTCAACAAAATCA+TGG | + | chr3_4:59482597-59482616 | Msa0510440:intron | 25.0% |
| !!! | TTCCATCTAGAGTTTTTTAA+AGG | - | chr3_4:59482652-59482671 | None:intergenic | 25.0% |
| ! | TTTAAAAAACTCTAGATGGA+AGG | + | chr3_4:59482651-59482670 | Msa0510440:intron | 25.0% |
| ! | CTATCTAAACCTAATTACTA+AGG | - | chr3_4:59483098-59483117 | None:intergenic | 25.0% |
| ! | GTAGATCTTCAATAAGATTT+AGG | + | chr3_4:59483476-59483495 | Msa0510440:intron | 25.0% |
| !! | ATGGATATGCTATTTACAAA+TGG | + | chr3_4:59483650-59483669 | Msa0510440:CDS | 25.0% |
| !! | TAATTGTTGAACATGTTTTG+TGG | + | chr3_4:59483691-59483710 | Msa0510440:exon | 25.0% |
| !!! | CTTTTGAGTAGAAAATCAAA+AGG | + | chr3_4:59483824-59483843 | Msa0510440:three_prime_UTR | 25.0% |
| !! | AAAATGAGGATATTTCTATC+AGG | - | chr3_4:59483959-59483978 | None:intergenic | 25.0% |
| ! | CTGTTACATATGTAAAAATG+AGG | - | chr3_4:59483973-59483992 | None:intergenic | 25.0% |
| !!! | CTCATTTTTACATATGTAAC+AGG | + | chr3_4:59483971-59483990 | Msa0510440:three_prime_UTR | 25.0% |
| !!! | TTTTGGTTACTTGTTATGAG+TGG | - | chr3_4:59482126-59482145 | None:intergenic | 30.0% |
| CACAATGAATAATCGTGATT+TGG | + | chr3_4:59482561-59482580 | Msa0510440:intron | 30.0% | |
| ! | GTCCTTTAAAAAACTCTAGA+TGG | + | chr3_4:59482647-59482666 | Msa0510440:intron | 30.0% |
| ! | CCAAAGTCGATATTTTCAAA+AGG | - | chr3_4:59482702-59482721 | None:intergenic | 30.0% |
| !!! | CCTTTTGAAAATATCGACTT+TGG | + | chr3_4:59482699-59482718 | Msa0510440:intron | 30.0% |
| GAGAACTAATTGGACTTTAT+CGG | - | chr3_4:59482809-59482828 | None:intergenic | 30.0% | |
| CATTACTAGTGAGAACTAAT+TGG | - | chr3_4:59482819-59482838 | None:intergenic | 30.0% | |
| !! | ACATCTTTATTGATTCGTTC+AGG | + | chr3_4:59483243-59483262 | Msa0510440:intron | 30.0% |
| GACACCAAAAATCTTAAGAT+CGG | + | chr3_4:59483265-59483284 | Msa0510440:intron | 30.0% | |
| TTATATTTGTGGCCATGAAA+TGG | + | chr3_4:59483363-59483382 | Msa0510440:intron | 30.0% | |
| !! | TCTTTTGGTAATCCATTTCA+TGG | - | chr3_4:59483378-59483397 | None:intergenic | 30.0% |
| !!! | GCTCTTTTAGAATATCATCA+AGG | - | chr3_4:59483440-59483459 | None:intergenic | 30.0% |
| ! | AGAATTTTCTTCTATGATCC+AGG | + | chr3_4:59483584-59483603 | Msa0510440:intron | 30.0% |
| ATTGTTTATACCGTGGTATA+TGG | + | chr3_4:59483631-59483650 | Msa0510440:CDS | 30.0% | |
| AATAGCATATCCATATACCA+CGG | - | chr3_4:59483644-59483663 | None:intergenic | 30.0% | |
| ! | GATATGCTATTTACAAATGG+TGG | + | chr3_4:59483653-59483672 | Msa0510440:CDS | 30.0% |
| ! | ATAATCACTGTTGTGGTTTT+TGG | - | chr3_4:59483789-59483808 | None:intergenic | 30.0% |
| ! | TTTGATGGCATATGAAAATG+GGG | - | chr3_4:59483869-59483888 | None:intergenic | 30.0% |
| ! | CTTTGATGGCATATGAAAAT+GGG | - | chr3_4:59483870-59483889 | None:intergenic | 30.0% |
| ! | ACTTTGATGGCATATGAAAA+TGG | - | chr3_4:59483871-59483890 | None:intergenic | 30.0% |
| TCTATCAGGAAGAATCAAAT+TGG | - | chr3_4:59483945-59483964 | None:intergenic | 30.0% | |
| !! | TATGAGCTTTAAATGCAAAC+GGG | - | chr3_4:59482057-59482076 | None:intergenic | 30.0% |
| !! | GTATGAGCTTTAAATGCAAA+CGG | - | chr3_4:59482058-59482077 | None:intergenic | 30.0% |
| !!! | TTTTGGTTACTTGTTATGAG+TGG | - | chr3_4:59482126-59482145 | None:intergenic | 30.0% |
| CACAATGAATAATCGTGATT+TGG | + | chr3_4:59482561-59482580 | Msa0510440:intron | 30.0% | |
| ! | GTCCTTTAAAAAACTCTAGA+TGG | + | chr3_4:59482647-59482666 | Msa0510440:intron | 30.0% |
| ! | CCAAAGTCGATATTTTCAAA+AGG | - | chr3_4:59482702-59482721 | None:intergenic | 30.0% |
| !!! | CCTTTTGAAAATATCGACTT+TGG | + | chr3_4:59482699-59482718 | Msa0510440:intron | 30.0% |
| GAGAACTAATTGGACTTTAT+CGG | - | chr3_4:59482809-59482828 | None:intergenic | 30.0% | |
| CATTACTAGTGAGAACTAAT+TGG | - | chr3_4:59482819-59482838 | None:intergenic | 30.0% | |
| !! | ACATCTTTATTGATTCGTTC+AGG | + | chr3_4:59483243-59483262 | Msa0510440:intron | 30.0% |
| GACACCAAAAATCTTAAGAT+CGG | + | chr3_4:59483265-59483284 | Msa0510440:intron | 30.0% | |
| TTATATTTGTGGCCATGAAA+TGG | + | chr3_4:59483363-59483382 | Msa0510440:intron | 30.0% | |
| !! | TCTTTTGGTAATCCATTTCA+TGG | - | chr3_4:59483378-59483397 | None:intergenic | 30.0% |
| !!! | GCTCTTTTAGAATATCATCA+AGG | - | chr3_4:59483440-59483459 | None:intergenic | 30.0% |
| ! | AGAATTTTCTTCTATGATCC+AGG | + | chr3_4:59483584-59483603 | Msa0510440:intron | 30.0% |
| ATTGTTTATACCGTGGTATA+TGG | + | chr3_4:59483631-59483650 | Msa0510440:CDS | 30.0% | |
| AATAGCATATCCATATACCA+CGG | - | chr3_4:59483644-59483663 | None:intergenic | 30.0% | |
| ! | GATATGCTATTTACAAATGG+TGG | + | chr3_4:59483653-59483672 | Msa0510440:CDS | 30.0% |
| ! | ATAATCACTGTTGTGGTTTT+TGG | - | chr3_4:59483789-59483808 | None:intergenic | 30.0% |
| ! | TTTGATGGCATATGAAAATG+GGG | - | chr3_4:59483869-59483888 | None:intergenic | 30.0% |
| ! | CTTTGATGGCATATGAAAAT+GGG | - | chr3_4:59483870-59483889 | None:intergenic | 30.0% |
| ! | ACTTTGATGGCATATGAAAA+TGG | - | chr3_4:59483871-59483890 | None:intergenic | 30.0% |
| TCTATCAGGAAGAATCAAAT+TGG | - | chr3_4:59483945-59483964 | None:intergenic | 30.0% | |
| ! | TTACAATTACGGTAGTGGTA+AGG | - | chr3_4:59482097-59482116 | None:intergenic | 35.0% |
| TATCAATCTCATCACAACCA+TGG | + | chr3_4:59482204-59482223 | Msa0510440:exon | 35.0% | |
| ! | CTCTAAGAACCTCTATACTT+TGG | + | chr3_4:59482239-59482258 | Msa0510440:CDS | 35.0% |
| ATGTTCGTTACCTATGTGTT+GGG | + | chr3_4:59482313-59482332 | Msa0510440:CDS | 35.0% | |
| ! | TTGGGTATTGTTGGAATTTC+TGG | + | chr3_4:59482331-59482350 | Msa0510440:CDS | 35.0% |
| TTAACCCGAAGTTATTACAG+TGG | - | chr3_4:59482625-59482644 | None:intergenic | 35.0% | |
| ! | CTGTAATAACTTCGGGTTAA+AGG | + | chr3_4:59482625-59482644 | Msa0510440:intron | 35.0% |
| TACATCCAATAGAGCTAAAG+AGG | + | chr3_4:59482977-59482996 | Msa0510440:intron | 35.0% | |
| TAAAGAGGTGAAGTGACATA+AGG | + | chr3_4:59482992-59483011 | Msa0510440:intron | 35.0% | |
| TGAAGTGACATAAGGTACAT+GGG | + | chr3_4:59483000-59483019 | Msa0510440:intron | 35.0% | |
| ! | AACCCAAGACATCATCTTTT+AGG | + | chr3_4:59483051-59483070 | Msa0510440:intron | 35.0% |
| ! | ACCCAAGACATCATCTTTTA+GGG | + | chr3_4:59483052-59483071 | Msa0510440:intron | 35.0% |
| !! | AAGAGCATAGAGTGTTTTCT+AGG | + | chr3_4:59483454-59483473 | Msa0510440:intron | 35.0% |
| ! | AAATGGTGGAAGTATGTATC+TGG | + | chr3_4:59483667-59483686 | Msa0510440:CDS | 35.0% |
| ! | TTACAATTACGGTAGTGGTA+AGG | - | chr3_4:59482097-59482116 | None:intergenic | 35.0% |
| TATCAATCTCATCACAACCA+TGG | + | chr3_4:59482204-59482223 | Msa0510440:exon | 35.0% | |
| ! | CTCTAAGAACCTCTATACTT+TGG | + | chr3_4:59482239-59482258 | Msa0510440:CDS | 35.0% |
| ATGTTCGTTACCTATGTGTT+GGG | + | chr3_4:59482313-59482332 | Msa0510440:CDS | 35.0% | |
| ! | TTGGGTATTGTTGGAATTTC+TGG | + | chr3_4:59482331-59482350 | Msa0510440:CDS | 35.0% |
| TTAACCCGAAGTTATTACAG+TGG | - | chr3_4:59482625-59482644 | None:intergenic | 35.0% | |
| ! | CTGTAATAACTTCGGGTTAA+AGG | + | chr3_4:59482625-59482644 | Msa0510440:intron | 35.0% |
| TACATCCAATAGAGCTAAAG+AGG | + | chr3_4:59482977-59482996 | Msa0510440:intron | 35.0% | |
| TAAAGAGGTGAAGTGACATA+AGG | + | chr3_4:59482992-59483011 | Msa0510440:intron | 35.0% | |
| TGAAGTGACATAAGGTACAT+GGG | + | chr3_4:59483000-59483019 | Msa0510440:intron | 35.0% | |
| ! | AACCCAAGACATCATCTTTT+AGG | + | chr3_4:59483051-59483070 | Msa0510440:intron | 35.0% |
| ! | ACCCAAGACATCATCTTTTA+GGG | + | chr3_4:59483052-59483071 | Msa0510440:intron | 35.0% |
| !! | AAGAGCATAGAGTGTTTTCT+AGG | + | chr3_4:59483454-59483473 | Msa0510440:intron | 35.0% |
| ! | AAATGGTGGAAGTATGTATC+TGG | + | chr3_4:59483667-59483686 | Msa0510440:CDS | 35.0% |
| CATGCTTACAATTACGGTAG+TGG | - | chr3_4:59482102-59482121 | None:intergenic | 40.0% | |
| CACTACCGTAATTGTAAGCA+TGG | + | chr3_4:59482100-59482119 | Msa0510440:five_prime_UTR | 40.0% | |
| AGTGGCCATGCTTACAATTA+CGG | - | chr3_4:59482108-59482127 | None:intergenic | 40.0% | |
| AAGAACCTCTATACTTTGGC+TGG | + | chr3_4:59482243-59482262 | Msa0510440:CDS | 40.0% | |
| ! | GCAGCAGTTATATTGGTAGT+TGG | + | chr3_4:59482265-59482284 | Msa0510440:CDS | 40.0% |
| GATGTTCGTTACCTATGTGT+TGG | + | chr3_4:59482312-59482331 | Msa0510440:CDS | 40.0% | |
| ! | ACCTATGTGTTGGGTATTGT+TGG | + | chr3_4:59482322-59482341 | Msa0510440:CDS | 40.0% |
| TCCAACAATACCCAACACAT+AGG | - | chr3_4:59482326-59482345 | None:intergenic | 40.0% | |
| ! | TGGTGTTCTTTTGCCTGATT+GGG | + | chr3_4:59482351-59482370 | Msa0510440:CDS | 40.0% |
| CGGTTGAAATAATCCCAATC+AGG | - | chr3_4:59482367-59482386 | None:intergenic | 40.0% | |
| TCAACCGTGATATTTCTCGT+TGG | + | chr3_4:59482380-59482399 | Msa0510440:CDS | 40.0% | |
| AAGGCCAACGAGAAATATCA+CGG | - | chr3_4:59482387-59482406 | None:intergenic | 40.0% | |
| TCCTCAACAGTAACAGGATA+AGG | - | chr3_4:59482406-59482425 | None:intergenic | 40.0% | |
| GATCTTTCCTCAACAGTAAC+AGG | - | chr3_4:59482412-59482431 | None:intergenic | 40.0% | |
| !! | TGGTGCCACTGTAATAACTT+CGG | + | chr3_4:59482617-59482636 | Msa0510440:intron | 40.0% |
| !! | CTTCACCTCTTTAGCTCTAT+TGG | - | chr3_4:59482985-59483004 | None:intergenic | 40.0% |
| GTGAAGTGACATAAGGTACA+TGG | + | chr3_4:59482999-59483018 | Msa0510440:intron | 40.0% | |
| CCCCTAAAAGATGATGTCTT+GGG | - | chr3_4:59483056-59483075 | None:intergenic | 40.0% | |
| ! | CCCAAGACATCATCTTTTAG+GGG | + | chr3_4:59483053-59483072 | Msa0510440:intron | 40.0% |
| ACCCCTAAAAGATGATGTCT+TGG | - | chr3_4:59483057-59483076 | None:intergenic | 40.0% | |
| ! | AGGGCCGATCTTAAGATTTT+TGG | - | chr3_4:59483272-59483291 | None:intergenic | 40.0% |
| GTTTACATGTTCTCCTCTGA+GGG | + | chr3_4:59483606-59483625 | Msa0510440:CDS | 40.0% | |
| GTATAAACAATCACCCTCAG+AGG | - | chr3_4:59483622-59483641 | None:intergenic | 40.0% | |
| CTTGTCGATAATCACTGTTG+TGG | - | chr3_4:59483796-59483815 | None:intergenic | 40.0% | |
| CACAACAGTGATTATCGACA+AGG | + | chr3_4:59483794-59483813 | Msa0510440:three_prime_UTR | 40.0% | |
| CAACTTGTGCTAGACTTTGA+TGG | - | chr3_4:59483884-59483903 | None:intergenic | 40.0% | |
| CATGCTTACAATTACGGTAG+TGG | - | chr3_4:59482102-59482121 | None:intergenic | 40.0% | |
| CACTACCGTAATTGTAAGCA+TGG | + | chr3_4:59482100-59482119 | Msa0510440:five_prime_UTR | 40.0% | |
| AGTGGCCATGCTTACAATTA+CGG | - | chr3_4:59482108-59482127 | None:intergenic | 40.0% | |
| AAGAACCTCTATACTTTGGC+TGG | + | chr3_4:59482243-59482262 | Msa0510440:CDS | 40.0% | |
| ! | GCAGCAGTTATATTGGTAGT+TGG | + | chr3_4:59482265-59482284 | Msa0510440:CDS | 40.0% |
| GATGTTCGTTACCTATGTGT+TGG | + | chr3_4:59482312-59482331 | Msa0510440:CDS | 40.0% | |
| ! | ACCTATGTGTTGGGTATTGT+TGG | + | chr3_4:59482322-59482341 | Msa0510440:CDS | 40.0% |
| TCCAACAATACCCAACACAT+AGG | - | chr3_4:59482326-59482345 | None:intergenic | 40.0% | |
| ! | TGGTGTTCTTTTGCCTGATT+GGG | + | chr3_4:59482351-59482370 | Msa0510440:CDS | 40.0% |
| CGGTTGAAATAATCCCAATC+AGG | - | chr3_4:59482367-59482386 | None:intergenic | 40.0% | |
| TCAACCGTGATATTTCTCGT+TGG | + | chr3_4:59482380-59482399 | Msa0510440:CDS | 40.0% | |
| AAGGCCAACGAGAAATATCA+CGG | - | chr3_4:59482387-59482406 | None:intergenic | 40.0% | |
| TCCTCAACAGTAACAGGATA+AGG | - | chr3_4:59482406-59482425 | None:intergenic | 40.0% | |
| GATCTTTCCTCAACAGTAAC+AGG | - | chr3_4:59482412-59482431 | None:intergenic | 40.0% | |
| !! | TGGTGCCACTGTAATAACTT+CGG | + | chr3_4:59482617-59482636 | Msa0510440:intron | 40.0% |
| !! | CTTCACCTCTTTAGCTCTAT+TGG | - | chr3_4:59482985-59483004 | None:intergenic | 40.0% |
| GTGAAGTGACATAAGGTACA+TGG | + | chr3_4:59482999-59483018 | Msa0510440:intron | 40.0% | |
| CCCCTAAAAGATGATGTCTT+GGG | - | chr3_4:59483056-59483075 | None:intergenic | 40.0% | |
| ! | CCCAAGACATCATCTTTTAG+GGG | + | chr3_4:59483053-59483072 | Msa0510440:intron | 40.0% |
| ACCCCTAAAAGATGATGTCT+TGG | - | chr3_4:59483057-59483076 | None:intergenic | 40.0% | |
| ! | AGGGCCGATCTTAAGATTTT+TGG | - | chr3_4:59483272-59483291 | None:intergenic | 40.0% |
| GTTTACATGTTCTCCTCTGA+GGG | + | chr3_4:59483606-59483625 | Msa0510440:CDS | 40.0% | |
| GTATAAACAATCACCCTCAG+AGG | - | chr3_4:59483622-59483641 | None:intergenic | 40.0% | |
| CTTGTCGATAATCACTGTTG+TGG | - | chr3_4:59483796-59483815 | None:intergenic | 40.0% | |
| CACAACAGTGATTATCGACA+AGG | + | chr3_4:59483794-59483813 | Msa0510440:three_prime_UTR | 40.0% | |
| CAACTTGTGCTAGACTTTGA+TGG | - | chr3_4:59483884-59483903 | None:intergenic | 40.0% | |
| TAGAGCTGCATCATTTGCCA+TGG | - | chr3_4:59482224-59482243 | None:intergenic | 45.0% | |
| TTGGCTGGCAGCAGTTATAT+TGG | + | chr3_4:59482258-59482277 | Msa0510440:CDS | 45.0% | |
| ! | CTGGTGTTCTTTTGCCTGAT+TGG | + | chr3_4:59482350-59482369 | Msa0510440:CDS | 45.0% |
| GCCTTATCCTGTTACTGTTG+AGG | + | chr3_4:59482402-59482421 | Msa0510440:CDS | 45.0% | |
| TCAGCAGCTTCTCTTTCTCA+TGG | + | chr3_4:59482430-59482449 | Msa0510440:CDS | 45.0% | |
| !! | GGTGCCACTGTAATAACTTC+GGG | + | chr3_4:59482618-59482637 | Msa0510440:intron | 45.0% |
| AGTGACATAAGGTACATGGG+TGG | + | chr3_4:59483003-59483022 | Msa0510440:intron | 45.0% | |
| ATGCTAGTGTTGCCTTGTCA+GGG | - | chr3_4:59483291-59483310 | None:intergenic | 45.0% | |
| AATGCTAGTGTTGCCTTGTC+AGG | - | chr3_4:59483292-59483311 | None:intergenic | 45.0% | |
| ! | CAGCTGAGTCTATGCTCTTT+TGG | - | chr3_4:59483393-59483412 | None:intergenic | 45.0% |
| AGAGCATAGACTCAGCTGTT+AGG | + | chr3_4:59483395-59483414 | Msa0510440:intron | 45.0% | |
| CAGAGGAGAACATGTAAACC+TGG | - | chr3_4:59483605-59483624 | None:intergenic | 45.0% | |
| GGTTTACATGTTCTCCTCTG+AGG | + | chr3_4:59483605-59483624 | Msa0510440:intron | 45.0% | |
| GAGGGTGATTGTTTATACCG+TGG | + | chr3_4:59483624-59483643 | Msa0510440:CDS | 45.0% | |
| ! | TGTGCGAGTGTTGTAAACTC+TGG | + | chr3_4:59483917-59483936 | Msa0510440:three_prime_UTR | 45.0% |
| TAGAGCTGCATCATTTGCCA+TGG | - | chr3_4:59482224-59482243 | None:intergenic | 45.0% | |
| TTGGCTGGCAGCAGTTATAT+TGG | + | chr3_4:59482258-59482277 | Msa0510440:CDS | 45.0% | |
| ! | CTGGTGTTCTTTTGCCTGAT+TGG | + | chr3_4:59482350-59482369 | Msa0510440:CDS | 45.0% |
| GCCTTATCCTGTTACTGTTG+AGG | + | chr3_4:59482402-59482421 | Msa0510440:CDS | 45.0% | |
| TCAGCAGCTTCTCTTTCTCA+TGG | + | chr3_4:59482430-59482449 | Msa0510440:CDS | 45.0% | |
| !! | GGTGCCACTGTAATAACTTC+GGG | + | chr3_4:59482618-59482637 | Msa0510440:intron | 45.0% |
| AGTGACATAAGGTACATGGG+TGG | + | chr3_4:59483003-59483022 | Msa0510440:intron | 45.0% | |
| ATGCTAGTGTTGCCTTGTCA+GGG | - | chr3_4:59483291-59483310 | None:intergenic | 45.0% | |
| AATGCTAGTGTTGCCTTGTC+AGG | - | chr3_4:59483292-59483311 | None:intergenic | 45.0% | |
| ! | CAGCTGAGTCTATGCTCTTT+TGG | - | chr3_4:59483393-59483412 | None:intergenic | 45.0% |
| AGAGCATAGACTCAGCTGTT+AGG | + | chr3_4:59483395-59483414 | Msa0510440:intron | 45.0% | |
| CAGAGGAGAACATGTAAACC+TGG | - | chr3_4:59483605-59483624 | None:intergenic | 45.0% | |
| GGTTTACATGTTCTCCTCTG+AGG | + | chr3_4:59483605-59483624 | Msa0510440:intron | 45.0% | |
| GAGGGTGATTGTTTATACCG+TGG | + | chr3_4:59483624-59483643 | Msa0510440:CDS | 45.0% | |
| ! | TGTGCGAGTGTTGTAAACTC+TGG | + | chr3_4:59483917-59483936 | Msa0510440:three_prime_UTR | 45.0% |
| !! | TAAAGTAAAATTTAAATTAA+GGG | - | chr3_4:59483526-59483545 | None:intergenic | 5.0% |
| !! | ATAAAGTAAAATTTAAATTA+AGG | - | chr3_4:59483527-59483546 | None:intergenic | 5.0% |
| !! | TAAAGTAAAATTTAAATTAA+GGG | - | chr3_4:59483526-59483545 | None:intergenic | 5.0% |
| !! | ATAAAGTAAAATTTAAATTA+AGG | - | chr3_4:59483527-59483546 | None:intergenic | 5.0% |
| TGCTGCCAGCCAAAGTATAG+AGG | - | chr3_4:59482251-59482270 | None:intergenic | 50.0% | |
| ATAAGGTACATGGGTGGCCT+TGG | + | chr3_4:59483009-59483028 | Msa0510440:intron | 50.0% | |
| TCTTAAGATCGGCCCTGACA+AGG | + | chr3_4:59483276-59483295 | Msa0510440:intron | 50.0% | |
| TGCTGCCAGCCAAAGTATAG+AGG | - | chr3_4:59482251-59482270 | None:intergenic | 50.0% | |
| ATAAGGTACATGGGTGGCCT+TGG | + | chr3_4:59483009-59483028 | Msa0510440:intron | 50.0% | |
| TCTTAAGATCGGCCCTGACA+AGG | + | chr3_4:59483276-59483295 | Msa0510440:intron | 50.0% | |
| ! | TACATGGGTGGCCTTGGAGT+GGG | + | chr3_4:59483015-59483034 | Msa0510440:intron | 55.0% |
| ! | TACATGGGTGGCCTTGGAGT+GGG | + | chr3_4:59483015-59483034 | Msa0510440:intron | 55.0% |
| ! | GTACATGGGTGGCCTTGGAG+TGG | + | chr3_4:59483014-59483033 | Msa0510440:intron | 60.0% |
| ! | GTACATGGGTGGCCTTGGAG+TGG | + | chr3_4:59483014-59483033 | Msa0510440:intron | 60.0% |
| ! | TGGCCTTGGAGTGGGCAGGA+GGG | + | chr3_4:59483023-59483042 | Msa0510440:intron | 65.0% |
| ! | TGGCCTTGGAGTGGGCAGGA+GGG | + | chr3_4:59483023-59483042 | Msa0510440:intron | 65.0% |
| ! | TGGGTGGCCTTGGAGTGGGC+AGG | + | chr3_4:59483019-59483038 | Msa0510440:intron | 70.0% |
| ! | GTGGCCTTGGAGTGGGCAGG+AGG | + | chr3_4:59483022-59483041 | Msa0510440:intron | 70.0% |
| GGCCTTGGAGTGGGCAGGAG+GGG | + | chr3_4:59483024-59483043 | Msa0510440:intron | 70.0% | |
| CACCCCTCCTGCCCACTCCA+AGG | - | chr3_4:59483029-59483048 | None:intergenic | 70.0% | |
| ! | TGGGTGGCCTTGGAGTGGGC+AGG | + | chr3_4:59483019-59483038 | Msa0510440:intron | 70.0% |
| ! | GTGGCCTTGGAGTGGGCAGG+AGG | + | chr3_4:59483022-59483041 | Msa0510440:intron | 70.0% |
| GGCCTTGGAGTGGGCAGGAG+GGG | + | chr3_4:59483024-59483043 | Msa0510440:intron | 70.0% | |
| CACCCCTCCTGCCCACTCCA+AGG | - | chr3_4:59483029-59483048 | None:intergenic | 70.0% |
| Chromosome | Type | Strat | End | Strand | Name |
|---|---|---|---|---|---|
| chr3_4 | gene | 59482057 | 59484027 | 59482057 | ID=Msa0510440;Name=Msa0510440 |
| chr3_4 | mRNA | 59482057 | 59484027 | 59482057 | ID=Msa0510440-mRNA-1;Parent=Msa0510440;Name=Msa0510440-mRNA-1;_AED=0.00;_eAED=0.00;_QI=166|1|1|1|1|1|2|334|110 |
| chr3_4 | exon | 59482057 | 59482467 | 59482057 | ID=Msa0510440-mRNA-1:exon:13927;Parent=Msa0510440-mRNA-1 |
| chr3_4 | exon | 59483606 | 59484027 | 59483606 | ID=Msa0510440-mRNA-1:exon:13928;Parent=Msa0510440-mRNA-1 |
| chr3_4 | five_prime_UTR | 59482057 | 59482222 | 59482057 | ID=Msa0510440-mRNA-1:five_prime_utr;Parent=Msa0510440-mRNA-1 |
| chr3_4 | CDS | 59482223 | 59482467 | 59482223 | ID=Msa0510440-mRNA-1:cds;Parent=Msa0510440-mRNA-1 |
| chr3_4 | CDS | 59483606 | 59483693 | 59483606 | ID=Msa0510440-mRNA-1:cds;Parent=Msa0510440-mRNA-1 |
| chr3_4 | three_prime_UTR | 59483694 | 59484027 | 59483694 | ID=Msa0510440-mRNA-1:three_prime_utr;Parent=Msa0510440-mRNA-1 |
| Gene Sequence |
| Protein sequence |
