AlfalfaGEDB Alfalfa Gene Editing Database

M. sativa cultivar zhongmu-4 / Msa0914900

Query id Subject id identity % alignment length mismatches gap openings q. start q. end s. start s. end e-value bit score
Msa0914900 MtrunA17_Chr6g0470101 88.961 308 11 3 1 289 51 354 0.0 521
Msa0914900 MtrunA17_Chr3g0086601 41.791 201 97 3 41 222 75 274 2.93e-44 151
Msa0914900 MtrunA17_Chr5g0398991 34.615 156 85 2 63 201 81 236 1.19e-25 102
Query id Subject id identity % alignment length mismatches gap openings q. start q. end s. start s. end e-value bit score
Msa0914900 AT4G21190.1 65.158 221 58 2 20 221 23 243 5.32e-102 300
Msa0914900 AT4G18975.2 44.162 197 90 3 42 219 58 253 4.50e-49 164
Msa0914900 AT4G18975.3 44.162 197 90 3 42 219 85 280 9.32e-49 164
Msa0914900 AT4G18975.4 44.162 197 90 3 42 219 85 280 9.32e-49 164
Msa0914900 AT4G18975.1 44.162 197 90 3 42 219 85 280 9.32e-49 164
Msa0914900 AT1G04590.1 34.615 182 99 3 40 201 131 312 7.46e-26 105
Msa0914900 AT1G04590.2 34.595 185 98 4 40 201 131 315 2.01e-24 101

Find 101 sgRNAs with CRISPR-Local

Find 298 sgRNAs with CRISPR-GE


CRISPR-Local

CRISPR-Local
sgRNA_sequence on_target_score Position Region
ACTGTGGACTTCGCCATTTC+AGG 0.183949 6_2:-30070771 None:intergenic
ACGTATCTATCAACTTTATT+AGG 0.201297 6_2:-30070328 None:intergenic
TCCTATAATTACAGTGAAAA+AGG 0.241597 6_2:+30068254 Msa0914900:CDS
TTACGGCCAGGTTTGGGTTT+TGG 0.249976 6_2:-30066536 None:intergenic
TGGTAGCCATTTCATTTATA+AGG 0.263319 6_2:+30070704 Msa0914900:three_prime_UTR
AAAATGTAAGCCTGAGAATT+TGG 0.265784 6_2:+30070681 Msa0914900:three_prime_UTR
GACAATGTTCAACGAAATTC+AGG 0.282692 6_2:+30070361 Msa0914900:CDS
AATGTCAAAGAAGAAGTTTA+TGG 0.291907 6_2:+30068195 Msa0914900:CDS
AGATGAGTCATCTGAGTTTA+CGG 0.299452 6_2:+30070486 Msa0914900:CDS
CCGAGATTTACGGCCAGGTT+TGG 0.305873 6_2:-30066543 None:intergenic
GAACAGGATGCCGATTTAAT+AGG 0.309673 6_2:+30070442 Msa0914900:CDS
CTTCAATTCAGCATTGATAC+TGG 0.319784 6_2:-30070820 None:intergenic
AATGCATATAGGCTTTGATT+AGG 0.320445 6_2:+30070906 Msa0914900:three_prime_UTR
TACACACAAAATCATTATTT+CGG 0.321174 6_2:+30070589 Msa0914900:three_prime_UTR
TTTCCTGAATGCATAATATA+TGG 0.334719 6_2:+30070864 Msa0914900:three_prime_UTR
CTAACTCCGCCCGAGATTTA+CGG 0.342115 6_2:-30066553 None:intergenic
TCTCCATATATTATGCATTC+AGG 0.344803 6_2:-30070867 None:intergenic
AAGGAAAGCGTGTAAGAATC+AGG 0.347993 6_2:+30070293 Msa0914900:CDS
TGAAACTATAGGTAACAAAA+TGG 0.351629 6_2:+30068503 Msa0914900:intron
GACCAAGATATCCTCGAGTT+TGG 0.361562 6_2:+30066791 Msa0914900:CDS
TGACTCATCTGAAATTTGTT+TGG 0.365964 6_2:-30070473 None:intergenic
CGAGATTTACGGCCAGGTTT+GGG 0.373990 6_2:-30066542 None:intergenic
TTGACGAAGCAGAAGAGCTT+TGG 0.377250 6_2:+30068602 Msa0914900:CDS
TATTTGATATGTTAATTTGT+TGG 0.381277 6_2:-30066645 None:intergenic
GGTTTCCATGCCTATTAAAT+CGG 0.386492 6_2:-30070452 None:intergenic
AAGTGGATGATGATGGATTT+GGG 0.389153 6_2:-30066463 None:intergenic
ATGCATATAGGCTTTGATTA+GGG 0.389204 6_2:+30070907 Msa0914900:three_prime_UTR
CGAGGTAAGGTGAAGACATT+AGG 0.390237 6_2:+30070635 Msa0914900:three_prime_UTR
GAAGTGGATGATGATGGATT+TGG 0.396162 6_2:-30066464 None:intergenic
TAGTAGTTCTGTTGTCTCAA+TGG 0.409178 6_2:+30070177 Msa0914900:CDS
TTCCAAACTCGAGGATATCT+TGG 0.417267 6_2:-30066793 None:intergenic
TGATATCCTTATAAATGAAA+TGG 0.417527 6_2:-30070710 None:intergenic
AGAAGAGACTTCAGAGTTAA+CGG 0.420834 6_2:+30070405 Msa0914900:CDS
TCTACTTCAGATTCCTGAAA+TGG 0.427650 6_2:+30070758 Msa0914900:three_prime_UTR
AAGGTATTTGCTGCTGCAAA+AGG 0.436480 6_2:+30066763 Msa0914900:intron
TGAATTGAAGTTGGGTACTT+TGG 0.441846 6_2:+30070833 Msa0914900:three_prime_UTR
CCAAACCTGGCCGTAAATCT+CGG 0.445698 6_2:+30066543 Msa0914900:five_prime_UTR
CTGCTTGTGGCGGTGGCTGA+TGG 0.447414 6_2:-30066576 None:intergenic
GCATAATATATGGAGATTGT+AGG 0.449323 6_2:+30070874 Msa0914900:three_prime_UTR
CTATATTCCCATTGTGGTGG+TGG 0.450226 6_2:-30070262 None:intergenic
AAAATATCCACCACCACAAT+GGG 0.452410 6_2:+30070255 Msa0914900:CDS
ACTCGAGGATATCTTGGTCT+TGG 0.456302 6_2:-30066787 None:intergenic
TTCGACTTGCTGCTGATGTA+AGG 0.458742 6_2:-30066495 None:intergenic
CTCTTGATACCTATGTCGCT+TGG 0.459035 6_2:+30068220 Msa0914900:CDS
AGCATTACTGCTTGTGGCGG+TGG 0.467846 6_2:-30066583 None:intergenic
TATCAATGCTGAATTGAAGT+TGG 0.470532 6_2:+30070824 Msa0914900:three_prime_UTR
ATGTAAGGTTGGTGTGGAAG+TGG 0.475787 6_2:-30066480 None:intergenic
CATGTAGGTATTTGCAGACA+TGG 0.476328 6_2:+30070135 Msa0914900:intron
GGACGATGAACAATTCGAAC+AGG 0.477783 6_2:+30070426 Msa0914900:CDS
TCCGCCCGAGATTTACGGCC+AGG 0.477901 6_2:-30066548 None:intergenic
AGTTCTGTTGTCTCAATGGT+TGG 0.480356 6_2:+30070181 Msa0914900:CDS
AATGGTTGGAAATGTCTTCA+AGG 0.484077 6_2:+30070195 Msa0914900:CDS
GATATGTTAATTTGTTGGTA+TGG 0.485734 6_2:-30066640 None:intergenic
CTTCAAGGAGCTAGGTATGA+TGG 0.487411 6_2:+30070210 Msa0914900:CDS
CATAATATATGGAGATTGTA+GGG 0.487894 6_2:+30070875 Msa0914900:three_prime_UTR
ATATCTATCTACTGTAAAAG+AGG 0.491255 6_2:+30068682 Msa0914900:CDS
ATCAATGCTGAATTGAAGTT+GGG 0.492173 6_2:+30070825 Msa0914900:three_prime_UTR
CTTGCATGATAAGATGTTTG+AGG 0.498325 6_2:+30068705 Msa0914900:CDS
TCTTGATACCTATGTCGCTT+GGG 0.501458 6_2:+30068221 Msa0914900:CDS
CAAACCTGGCCGTAAATCTC+GGG 0.502020 6_2:+30066544 Msa0914900:five_prime_UTR
GAAGTTCTGTGTTATACTGT+TGG 0.504569 6_2:+30070939 Msa0914900:three_prime_UTR
AACAAAATGGATGTTAAGCA+AGG 0.507980 6_2:+30068516 Msa0914900:CDS
ATGGCTACCACCAAATTCTC+AGG 0.509342 6_2:-30070691 None:intergenic
TTGTGTGTAACCAACATCAA+TGG 0.511366 6_2:-30070575 None:intergenic
TCTCGTTATACATCTAAACT+TGG 0.517938 6_2:-30070511 None:intergenic
CTACATGCTGTTACGAGGTA+AGG 0.523242 6_2:+30070622 Msa0914900:three_prime_UTR
ATTGAGACAACAGAACTACT+AGG 0.527919 6_2:-30070175 None:intergenic
TGCCCGCCAAAACCCAAACC+TGG 0.542227 6_2:+30066530 Msa0914900:five_prime_UTR
GCTCTTCTGCTTCGTCAACT+CGG 0.545541 6_2:-30068597 None:intergenic
TTTCTGTTGGCCATTGATGT+TGG 0.548156 6_2:+30070565 Msa0914900:three_prime_UTR
TGATAGATACGTAAGAAAGC+AGG 0.551062 6_2:+30070339 Msa0914900:CDS
ACTTGCTGCTGATGTAAGGT+TGG 0.552667 6_2:-30066491 None:intergenic
ACTAACAGATAAGTTTCTGT+TGG 0.553495 6_2:+30070552 Msa0914900:three_prime_UTR
GATGTATAACGAGAGAAAGA+TGG 0.554815 6_2:+30070520 Msa0914900:exon
TTCTAGTTCCCAAGCGACAT+AGG 0.558781 6_2:-30068229 None:intergenic
CTGCTGATGTAAGGTTGGTG+TGG 0.558823 6_2:-30066486 None:intergenic
GGATGCCGATTTAATAGGCA+TGG 0.559417 6_2:+30070447 Msa0914900:CDS
ATGTATCTATATTCCCATTG+TGG 0.561013 6_2:-30070268 None:intergenic
AAGGGTCAAGGAAAGACAAT+GGG 0.563191 6_2:+30068535 Msa0914900:CDS
TTATTAGTCTTCCAAACTCG+AGG 0.571818 6_2:-30066802 None:intergenic
GAACATAACAACTTATACTG+TGG 0.577110 6_2:-30070787 None:intergenic
GGAAATGTCTTCAAGGAGCT+AGG 0.581726 6_2:+30070202 Msa0914900:CDS
ATTACTTAATGCTTTAGCAG+AGG 0.581952 6_2:+30068570 Msa0914900:CDS
ATGTAAGCCTGAGAATTTGG+TGG 0.593101 6_2:+30070684 Msa0914900:three_prime_UTR
GGTGTGGAAGTGGATGATGA+TGG 0.594460 6_2:-30066470 None:intergenic
CGTGTAAGAATCAGGGTGCA+AGG 0.595586 6_2:+30070301 Msa0914900:CDS
ACGAAATTCAGGCTTAAGAG+AGG 0.595718 6_2:+30070372 Msa0914900:CDS
TGGGAATATAGATACATCAA+AGG 0.609942 6_2:+30070274 Msa0914900:CDS
AGGAAAGCGTGTAAGAATCA+GGG 0.610217 6_2:+30070294 Msa0914900:CDS
TGGATGTTAAGCAAGGGTCA+AGG 0.625921 6_2:+30068523 Msa0914900:CDS
TATCTATATTCCCATTGTGG+TGG 0.627567 6_2:-30070265 None:intergenic
CTTACCTCGTAACAGCATGT+AGG 0.629695 6_2:-30070621 None:intergenic
TATGGTTTAGCAATAAGTAG+AGG 0.629980 6_2:-30066622 None:intergenic
ACAAAATGGATGTTAAGCAA+GGG 0.632530 6_2:+30068517 Msa0914900:CDS
CAAGGGTCAAGGAAAGACAA+TGG 0.634494 6_2:+30068534 Msa0914900:CDS
GACTCCTACATGCTGTTACG+AGG 0.640590 6_2:+30070617 Msa0914900:three_prime_UTR
ACCTGGCCGTAAATCTCGGG+CGG 0.643892 6_2:+30066547 Msa0914900:five_prime_UTR
AGTGAAAGCATTACTGCTTG+TGG 0.656125 6_2:-30066589 None:intergenic
AAAGTTGTTAATGCAGTACA+CGG 0.674701 6_2:+30068627 Msa0914900:CDS
GAAAGCATTACTGCTTGTGG+CGG 0.705239 6_2:-30066586 None:intergenic
GTAGGTATTTGCAGACATGG+AGG 0.706718 6_2:+30070138 Msa0914900:intron

CRISPR-GE

badsite warning sgRNA_sequence Strand Position Region GC_content
!! AAAAAGTAAAAAGATTAATT+TGG + chr6_2:30066428-30066447 Msa0914900:five_prime_UTR 10.0%
!! AAAATAATTACTCAAATTTA+AGG - chr6_2:30068789-30068808 None:intergenic 10.0%
!! TTATATATATTCTGTAAATA+TGG + chr6_2:30068931-30068950 Msa0914900:intron 10.0%
!!! TATTTGATATGTTAATTTGT+TGG - chr6_2:30066648-30066667 None:intergenic 15.0%
!! AATAACTAAGTAGTTATTTA+TGG + chr6_2:30069591-30069610 Msa0914900:intron 15.0%
!!! TTGAAACTAATATTTTAGTT+CGG + chr6_2:30069950-30069969 Msa0914900:intron 15.0%
!! TGGAAGACTAATAAAAAAAT+TGG + chr6_2:30066811-30066830 Msa0914900:CDS 20.0%
!!! AAAAATTGGAACTATTTCTA+AGG + chr6_2:30066825-30066844 Msa0914900:CDS 20.0%
!! TAAATTTAATAACATGTGTG+TGG + chr6_2:30067000-30067019 Msa0914900:intron 20.0%
!! AAATTTAATAACATGTGTGT+GGG + chr6_2:30067001-30067020 Msa0914900:intron 20.0%
!! AATCTTAGTAGTTTATACTT+TGG + chr6_2:30067402-30067421 Msa0914900:intron 20.0%
!! AATGAACATAAAAAATCACA+AGG - chr6_2:30068352-30068371 None:intergenic 20.0%
!!! AAATTACTTTCTGAAACTAT+AGG + chr6_2:30068492-30068511 Msa0914900:intron 20.0%
!! TTGTATATTCAAAGTTCAAA+TGG + chr6_2:30068841-30068860 Msa0914900:intron 20.0%
!! AAAGCTATTAGAGTAAAAAT+AGG + chr6_2:30068887-30068906 Msa0914900:intron 20.0%
!! ATTTGCATGTTTACTATATT+AGG - chr6_2:30069651-30069670 None:intergenic 20.0%
!! TTTCTTAAGAAGTAAACATA+CGG + chr6_2:30069845-30069864 Msa0914900:intron 20.0%
!! ATTATTATTATGTGCTTTAG+TGG - chr6_2:30070051-30070070 None:intergenic 20.0%
!! ACAAACAAATGTTGTTAATA+TGG + chr6_2:30070078-30070097 Msa0914900:intron 20.0%
!! TACACACAAAATCATTATTT+CGG + chr6_2:30070589-30070608 Msa0914900:three_prime_UTR 20.0%
!! TGATATCCTTATAAATGAAA+TGG - chr6_2:30070713-30070732 None:intergenic 20.0%
!!! GTATAATTGTTTTTGTATCA+AGG - chr6_2:30071017-30071036 None:intergenic 20.0%
!!! GATATGTTAATTTGTTGGTA+TGG - chr6_2:30066643-30066662 None:intergenic 25.0%
!!! TCCTTAGTTCTATAGTTTTT+AGG + chr6_2:30066695-30066714 Msa0914900:intron 25.0%
!!! CCTTAGTTCTATAGTTTTTA+GGG + chr6_2:30066696-30066715 Msa0914900:intron 25.0%
!! ATGTCTTAGATAAAAAGTGT+TGG + chr6_2:30067045-30067064 Msa0914900:intron 25.0%
! TTCAGTGTAATTATATGTGT+CGG - chr6_2:30067282-30067301 None:intergenic 25.0%
!!! AAAAATTGGTGTTTTTGTTG+AGG + chr6_2:30067660-30067679 Msa0914900:intron 25.0%
!!! AAAATTGGTGTTTTTGTTGA+GGG + chr6_2:30067661-30067680 Msa0914900:intron 25.0%
! ATTACCGAGTTGTAAAATAT+TGG + chr6_2:30067730-30067749 Msa0914900:intron 25.0%
! AATGTCAAAGAAGAAGTTTA+TGG + chr6_2:30068195-30068214 Msa0914900:CDS 25.0%
! TCCTATAATTACAGTGAAAA+AGG + chr6_2:30068254-30068273 Msa0914900:CDS 25.0%
!!! ACCTTTTTCACTGTAATTAT+AGG - chr6_2:30068258-30068277 None:intergenic 25.0%
! TGAAACTATAGGTAACAAAA+TGG + chr6_2:30068503-30068522 Msa0914900:intron 25.0%
!! ATTTTATCAAAGAATCTACG+TGG - chr6_2:30068661-30068680 None:intergenic 25.0%
! ATATCTATCTACTGTAAAAG+AGG + chr6_2:30068682-30068701 Msa0914900:CDS 25.0%
! TCAAATGGCAAAATATACAT+TGG + chr6_2:30068856-30068875 Msa0914900:intron 25.0%
!!! TTTTTTCAGCATATTTCCAA+TGG - chr6_2:30069075-30069094 None:intergenic 25.0%
! GGAAATATGCTGAAAAAAAA+AGG + chr6_2:30069077-30069096 Msa0914900:intron 25.0%
! AAATAACTGAATGAAAACAG+AGG + chr6_2:30069138-30069157 Msa0914900:intron 25.0%
! AAAAATCAAATAGAGTGGTA+TGG + chr6_2:30069428-30069447 Msa0914900:intron 25.0%
!!! AGTGTTGTTATTTATAGACT+CGG + chr6_2:30069510-30069529 Msa0914900:intron 25.0%
! ACAAATGTTGTTAATATGGA+TGG + chr6_2:30070082-30070101 Msa0914900:intron 25.0%
! AATTGAGTAAAATATTGAGC+CGG - chr6_2:30070112-30070131 None:intergenic 25.0%
!! TTTTACTCAATTTCTCATGT+AGG + chr6_2:30070120-30070139 Msa0914900:intron 25.0%
! ACGTATCTATCAACTTTATT+AGG - chr6_2:30070331-30070350 None:intergenic 25.0%
! TTTCCTGAATGCATAATATA+TGG + chr6_2:30070864-30070883 Msa0914900:three_prime_UTR 25.0%
! CATAATATATGGAGATTGTA+GGG + chr6_2:30070875-30070894 Msa0914900:three_prime_UTR 25.0%
TATGGTTTAGCAATAAGTAG+AGG - chr6_2:30066625-30066644 None:intergenic 30.0%
CCCTAAAAACTATAGAACTA+AGG - chr6_2:30066699-30066718 None:intergenic 30.0%
!! CTTTTTATCTAAGACATGTC+CGG - chr6_2:30067042-30067061 None:intergenic 30.0%
!!! GACACAGTGACTTTTTTATA+TGG - chr6_2:30067553-30067572 None:intergenic 30.0%
! ATTTTTATGACTTTAACCCG+TGG - chr6_2:30067646-30067665 None:intergenic 30.0%
CGGGTTAAAGTCATAAAAAT+TGG + chr6_2:30067646-30067665 Msa0914900:intron 30.0%
! ATGGCCAATATTTTACAACT+CGG - chr6_2:30067737-30067756 None:intergenic 30.0%
!!! CACCATGGTGTTTTATTTTA+TGG + chr6_2:30067817-30067836 Msa0914900:intron 30.0%
!!! CATGGTGTTTTATTTTATGG+CGG + chr6_2:30067820-30067839 Msa0914900:intron 30.0%
! TATTTTATGGCGGTTCAAAA+TGG + chr6_2:30067830-30067849 Msa0914900:intron 30.0%
TTTATGTTCAACTCTCTTCA+TGG + chr6_2:30068054-30068073 Msa0914900:intron 30.0%
TTATGTTCAACTCTCTTCAT+GGG + chr6_2:30068055-30068074 Msa0914900:intron 30.0%
AACAAAATGGATGTTAAGCA+AGG + chr6_2:30068516-30068535 Msa0914900:CDS 30.0%
ACAAAATGGATGTTAAGCAA+GGG + chr6_2:30068517-30068536 Msa0914900:CDS 30.0%
ATTACTTAATGCTTTAGCAG+AGG + chr6_2:30068570-30068589 Msa0914900:CDS 30.0%
AAAGTTGTTAATGCAGTACA+CGG + chr6_2:30068627-30068646 Msa0914900:CDS 30.0%
ATGAAACGAAGATGTTCATT+CGG + chr6_2:30068992-30069011 Msa0914900:intron 30.0%
TATGCTGAAAAAAAAAGGAG+AGG + chr6_2:30069082-30069101 Msa0914900:intron 30.0%
GAAAGAAACCAAAAACATAG+AGG + chr6_2:30069104-30069123 Msa0914900:intron 30.0%
AAAAGACTTGACAAATACTC+AGG + chr6_2:30069206-30069225 Msa0914900:intron 30.0%
GGCAAAAAAATCAAATAGAG+TGG + chr6_2:30069423-30069442 Msa0914900:intron 30.0%
!! TTTAATCAGTAGCTTTAGTG+TGG + chr6_2:30069792-30069811 Msa0914900:intron 30.0%
ACAATCCAGTACTATATTCT+AGG - chr6_2:30069884-30069903 None:intergenic 30.0%
AAAGTTGTTACAGTAGATGA+CGG + chr6_2:30069923-30069942 Msa0914900:intron 30.0%
TTTCTTGCAGTCAGTTATTT+CGG - chr6_2:30069991-30070010 None:intergenic 30.0%
TGTTAATATGGATGGAATTC+CGG + chr6_2:30070090-30070109 Msa0914900:intron 30.0%
ATGTATCTATATTCCCATTG+TGG - chr6_2:30070271-30070290 None:intergenic 30.0%
TGGGAATATAGATACATCAA+AGG + chr6_2:30070274-30070293 Msa0914900:CDS 30.0%
! TGACTCATCTGAAATTTGTT+TGG - chr6_2:30070476-30070495 None:intergenic 30.0%
TCTCGTTATACATCTAAACT+TGG - chr6_2:30070514-30070533 None:intergenic 30.0%
ACTAACAGATAAGTTTCTGT+TGG + chr6_2:30070552-30070571 Msa0914900:three_prime_UTR 30.0%
AAAATGTAAGCCTGAGAATT+TGG + chr6_2:30070681-30070700 Msa0914900:three_prime_UTR 30.0%
TGGTAGCCATTTCATTTATA+AGG + chr6_2:30070704-30070723 Msa0914900:three_prime_UTR 30.0%
GAACATAACAACTTATACTG+TGG - chr6_2:30070790-30070809 None:intergenic 30.0%
TATCAATGCTGAATTGAAGT+TGG + chr6_2:30070824-30070843 Msa0914900:three_prime_UTR 30.0%
ATCAATGCTGAATTGAAGTT+GGG + chr6_2:30070825-30070844 Msa0914900:three_prime_UTR 30.0%
TCTCCATATATTATGCATTC+AGG - chr6_2:30070870-30070889 None:intergenic 30.0%
GCATAATATATGGAGATTGT+AGG + chr6_2:30070874-30070893 Msa0914900:three_prime_UTR 30.0%
! AATGCATATAGGCTTTGATT+AGG + chr6_2:30070906-30070925 Msa0914900:three_prime_UTR 30.0%
! ATGCATATAGGCTTTGATTA+GGG + chr6_2:30070907-30070926 Msa0914900:three_prime_UTR 30.0%
!! AAGTGGATGATGATGGATTT+GGG - chr6_2:30066466-30066485 None:intergenic 35.0%
!! TTATTAGTCTTCCAAACTCG+AGG - chr6_2:30066805-30066824 None:intergenic 35.0%
TATTCGAGAAAATAGCGTGT+TGG + chr6_2:30067131-30067150 Msa0914900:intron 35.0%
! GCTTCATAGCTTTTGATCAA+AGG - chr6_2:30067192-30067211 None:intergenic 35.0%
! CTCTTTTGATCTATGAAGCA+CGG - chr6_2:30067366-30067385 None:intergenic 35.0%
GCTTCATAGATCAAAAGAGT+CGG + chr6_2:30067367-30067386 Msa0914900:intron 35.0%
ACTACCATATCACAACTAGT+GGG - chr6_2:30067431-30067450 None:intergenic 35.0%
TACTACCATATCACAACTAG+TGG - chr6_2:30067432-30067451 None:intergenic 35.0%
TATGGTAGTAGTACTCTTTG+TGG + chr6_2:30067442-30067461 Msa0914900:intron 35.0%
AAAAAAGTCACTGTGTCCTT+TGG + chr6_2:30067556-30067575 Msa0914900:intron 35.0%
GGTCATAGACAAATAGTGAA+GGG - chr6_2:30067600-30067619 None:intergenic 35.0%
AGGTCATAGACAAATAGTGA+AGG - chr6_2:30067601-30067620 None:intergenic 35.0%
!! TTGTCTATGACCTAGTCTTT+TGG + chr6_2:30067608-30067627 Msa0914900:intron 35.0%
!! TGTCTATGACCTAGTCTTTT+GGG + chr6_2:30067609-30067628 Msa0914900:intron 35.0%
GTTACGGAAAAGCTACTTAT+TGG + chr6_2:30067689-30067708 Msa0914900:intron 35.0%
TTGTAAAATATTGGCCATGC+TGG + chr6_2:30067739-30067758 Msa0914900:intron 35.0%
AAAATAAAACACCATGGTGC+CGG - chr6_2:30067816-30067835 None:intergenic 35.0%
CGCCATAAAATAAAACACCA+TGG - chr6_2:30067822-30067841 None:intergenic 35.0%
AATGGCAGAACATGGTAAAA+AGG - chr6_2:30067866-30067885 None:intergenic 35.0%
AATTCCAAAAAGCTACCACA+TGG + chr6_2:30067939-30067958 Msa0914900:intron 35.0%
!! ACCTTAAGCTGATTTTTCCT+TGG + chr6_2:30068111-30068130 Msa0914900:intron 35.0%
TCCAAGGAAAAATCAGCTTA+AGG - chr6_2:30068115-30068134 None:intergenic 35.0%
!! CTCTAGAATACGAGAAAGAA+TGG + chr6_2:30068286-30068305 Msa0914900:intron 35.0%
AATACGAGAAAGAATGGAAG+CGG + chr6_2:30068292-30068311 Msa0914900:intron 35.0%
! GCTGATTTATGTTCCTTCTT+TGG + chr6_2:30068440-30068459 Msa0914900:intron 35.0%
CTTGCATGATAAGATGTTTG+AGG + chr6_2:30068705-30068724 Msa0914900:CDS 35.0%
! TTTCATCAATTAGCCTGTCT+TGG - chr6_2:30068970-30068989 None:intergenic 35.0%
TCTTAATGGTGTTCAGCTAA+GGG - chr6_2:30069031-30069050 None:intergenic 35.0%
TTCTTAATGGTGTTCAGCTA+AGG - chr6_2:30069032-30069051 None:intergenic 35.0%
!! TAGTCTTACTGGCTTCTTAA+TGG - chr6_2:30069045-30069064 None:intergenic 35.0%
! ATGGAATACAGTAGTCTTAC+TGG - chr6_2:30069056-30069075 None:intergenic 35.0%
GTAAGACTACTGTATTCCAT+TGG + chr6_2:30069056-30069075 Msa0914900:intron 35.0%
AACCAAAAACATAGAGGAAG+AGG + chr6_2:30069110-30069129 Msa0914900:intron 35.0%
! TTCCTCTTCCTCTATGTTTT+TGG - chr6_2:30069115-30069134 None:intergenic 35.0%
AAAACATAGAGGAAGAGGAA+AGG + chr6_2:30069115-30069134 Msa0914900:intron 35.0%
AATGAAAACAGAGGCAGAAA+AGG + chr6_2:30069147-30069166 Msa0914900:intron 35.0%
ATGAAAACAGAGGCAGAAAA+GGG + chr6_2:30069148-30069167 Msa0914900:intron 35.0%
TCAAATAGAGTGGTATGGAT+AGG + chr6_2:30069433-30069452 Msa0914900:intron 35.0%
GGAATGATTGATCGTTACAT+TGG + chr6_2:30069479-30069498 Msa0914900:intron 35.0%
TTATTTATAGACTCGGCCTA+GGG + chr6_2:30069517-30069536 Msa0914900:intron 35.0%
AATACTCCAACATCTTTCCT+AGG + chr6_2:30069676-30069695 Msa0914900:intron 35.0%
TCAGACTAAATTGAACACCT+AGG - chr6_2:30069696-30069715 None:intergenic 35.0%
!! AGTACTATATTCTAGGACCA+AGG - chr6_2:30069877-30069896 None:intergenic 35.0%
TTGGTCCTAGAATATAGTAC+TGG + chr6_2:30069876-30069895 Msa0914900:intron 35.0%
! GAATATAGTACTGGATTGTG+CGG + chr6_2:30069885-30069904 Msa0914900:intron 35.0%
! AATATAGTACTGGATTGTGC+GGG + chr6_2:30069886-30069905 Msa0914900:intron 35.0%
! TTAGTTCGGTGAGAAATCAT+TGG + chr6_2:30069964-30069983 Msa0914900:intron 35.0%
GAAATAACTACAGCTATGTG+AGG + chr6_2:30070007-30070026 Msa0914900:intron 35.0%
ATTGAGACAACAGAACTACT+AGG - chr6_2:30070178-30070197 None:intergenic 35.0%
! TAGTAGTTCTGTTGTCTCAA+TGG + chr6_2:30070177-30070196 Msa0914900:CDS 35.0%
AATGGTTGGAAATGTCTTCA+AGG + chr6_2:30070195-30070214 Msa0914900:CDS 35.0%
AAAAATATCCACCACCACAA+TGG + chr6_2:30070254-30070273 Msa0914900:CDS 35.0%
AAAATATCCACCACCACAAT+GGG + chr6_2:30070255-30070274 Msa0914900:CDS 35.0%
TATCTATATTCCCATTGTGG+TGG - chr6_2:30070268-30070287 None:intergenic 35.0%
TGATAGATACGTAAGAAAGC+AGG + chr6_2:30070339-30070358 Msa0914900:CDS 35.0%
GACAATGTTCAACGAAATTC+AGG + chr6_2:30070361-30070380 Msa0914900:CDS 35.0%
AGAAGAGACTTCAGAGTTAA+CGG + chr6_2:30070405-30070424 Msa0914900:CDS 35.0%
GGTTTCCATGCCTATTAAAT+CGG - chr6_2:30070455-30070474 None:intergenic 35.0%
AGATGAGTCATCTGAGTTTA+CGG + chr6_2:30070486-30070505 Msa0914900:CDS 35.0%
GATGTATAACGAGAGAAAGA+TGG + chr6_2:30070520-30070539 Msa0914900:exon 35.0%
TTGTGTGTAACCAACATCAA+TGG - chr6_2:30070578-30070597 None:intergenic 35.0%
TCTACTTCAGATTCCTGAAA+TGG + chr6_2:30070758-30070777 Msa0914900:three_prime_UTR 35.0%
!! CTTCAATTCAGCATTGATAC+TGG - chr6_2:30070823-30070842 None:intergenic 35.0%
TGAATTGAAGTTGGGTACTT+TGG + chr6_2:30070833-30070852 Msa0914900:three_prime_UTR 35.0%
! GGGTGATTTTCAATGCATAT+AGG + chr6_2:30070895-30070914 Msa0914900:three_prime_UTR 35.0%
GAAGTTCTGTGTTATACTGT+TGG + chr6_2:30070939-30070958 Msa0914900:three_prime_UTR 35.0%
!! GAAGTGGATGATGATGGATT+TGG - chr6_2:30066467-30066486 None:intergenic 40.0%
!! AGTGAAAGCATTACTGCTTG+TGG - chr6_2:30066592-30066611 None:intergenic 40.0%
! AAGGTATTTGCTGCTGCAAA+AGG + chr6_2:30066763-30066782 Msa0914900:intron 40.0%
TTCCAAACTCGAGGATATCT+TGG - chr6_2:30066796-30066815 None:intergenic 40.0%
AAACGAATATAGCGAACGCA+AGG - chr6_2:30066881-30066900 None:intergenic 40.0%
TGACACTAATACATCGACAC+TGG + chr6_2:30067104-30067123 Msa0914900:intron 40.0%
! AGAAAATAGCGTGTTGGTGT+AGG + chr6_2:30067137-30067156 Msa0914900:intron 40.0%
TATGAAGCACAGACACTTCT+CGG + chr6_2:30067204-30067223 Msa0914900:intron 40.0%
ACGGATATAGACATGGACAT+CGG - chr6_2:30067347-30067366 None:intergenic 40.0%
ATGAAGCACGGATATAGACA+TGG - chr6_2:30067354-30067373 None:intergenic 40.0%
GTTTCCCACTAGTTGTGATA+TGG + chr6_2:30067424-30067443 Msa0914900:intron 40.0%
!! GTCTATGACCTAGTCTTTTG+GGG + chr6_2:30067610-30067629 Msa0914900:intron 40.0%
!! TGGTGTTTTTGTTGAGGGTT+TGG + chr6_2:30067666-30067685 Msa0914900:intron 40.0%
!! GGTGTTTTTGTTGAGGGTTT+GGG + chr6_2:30067667-30067686 Msa0914900:intron 40.0%
! TTTGTTGAGGGTTTGGGTTA+CGG + chr6_2:30067673-30067692 Msa0914900:intron 40.0%
GAGAAATTTGTGAAGGATGC+CGG + chr6_2:30067794-30067813 Msa0914900:intron 40.0%
TTTATGGCGGTTCAAAATGG+TGG + chr6_2:30067833-30067852 Msa0914900:intron 40.0%
! ATAGCGTTGTCGATTGCAAA+TGG - chr6_2:30067884-30067903 None:intergenic 40.0%
!!! TGGTAGCTTTTTGGAATTCG+TGG - chr6_2:30067937-30067956 None:intergenic 40.0%
TGATAGAGTAAAATCCGTCG+TGG + chr6_2:30067969-30067988 Msa0914900:intron 40.0%
CCAGAATTGCAAATCATCCA+AGG - chr6_2:30068131-30068150 None:intergenic 40.0%
! CCTTGGATGATTTGCAATTC+TGG + chr6_2:30068128-30068147 Msa0914900:intron 40.0%
! TCTTGATACCTATGTCGCTT+GGG + chr6_2:30068221-30068240 Msa0914900:CDS 40.0%
AGAATGGAAGCGGATAATAC+AGG + chr6_2:30068302-30068321 Msa0914900:intron 40.0%
AAGGGTCAAGGAAAGACAAT+GGG + chr6_2:30068535-30068554 Msa0914900:CDS 40.0%
! TTCAGCTAAGGGCTATTTCA+GGG - chr6_2:30069020-30069039 None:intergenic 40.0%
GATAGGATATGAGCGAACAA+AGG + chr6_2:30069175-30069194 Msa0914900:intron 40.0%
! CTTTTCTGTGCAGATGTAAG+TGG + chr6_2:30069402-30069421 Msa0914900:intron 40.0%
ATAGAGTGGTATGGATAGGA+AGG + chr6_2:30069437-30069456 Msa0914900:intron 40.0%
TATGGATAGGAAGGATTCTG+AGG + chr6_2:30069446-30069465 Msa0914900:intron 40.0%
! GGATTCTGAGGAATCTGTAA+TGG + chr6_2:30069458-30069477 Msa0914900:intron 40.0%
GTTATTTATAGACTCGGCCT+AGG + chr6_2:30069516-30069535 Msa0914900:intron 40.0%
TATTTATAGACTCGGCCTAG+GGG + chr6_2:30069518-30069537 Msa0914900:intron 40.0%
CTAACAATTAAGTCACCCCT+AGG - chr6_2:30069536-30069555 None:intergenic 40.0%
TGAACACCTAGGAAAGATGT+TGG - chr6_2:30069685-30069704 None:intergenic 40.0%
CATGTAGGTATTTGCAGACA+TGG + chr6_2:30070135-30070154 Msa0914900:intron 40.0%
AGTTCTGTTGTCTCAATGGT+TGG + chr6_2:30070181-30070200 Msa0914900:CDS 40.0%
! AAGGAAAGCGTGTAAGAATC+AGG + chr6_2:30070293-30070312 Msa0914900:CDS 40.0%
! AGGAAAGCGTGTAAGAATCA+GGG + chr6_2:30070294-30070313 Msa0914900:CDS 40.0%
ACGAAATTCAGGCTTAAGAG+AGG + chr6_2:30070372-30070391 Msa0914900:CDS 40.0%
!! GAACAGGATGCCGATTTAAT+AGG + chr6_2:30070442-30070461 Msa0914900:CDS 40.0%
TTTCTGTTGGCCATTGATGT+TGG + chr6_2:30070565-30070584 Msa0914900:three_prime_UTR 40.0%
ATGTAAGCCTGAGAATTTGG+TGG + chr6_2:30070684-30070703 Msa0914900:three_prime_UTR 40.0%
!! ATGTAAGGTTGGTGTGGAAG+TGG - chr6_2:30066483-30066502 None:intergenic 45.0%
! ACTTGCTGCTGATGTAAGGT+TGG - chr6_2:30066494-30066513 None:intergenic 45.0%
!! TTCGACTTGCTGCTGATGTA+AGG - chr6_2:30066498-30066517 None:intergenic 45.0%
!! GAAAGCATTACTGCTTGTGG+CGG - chr6_2:30066589-30066608 None:intergenic 45.0%
ACTCGAGGATATCTTGGTCT+TGG - chr6_2:30066790-30066809 None:intergenic 45.0%
GACCAAGATATCCTCGAGTT+TGG + chr6_2:30066791-30066810 Msa0914900:CDS 45.0%
!! TATATGTGTCGGTGTCATGC+CGG - chr6_2:30067271-30067290 None:intergenic 45.0%
TGTCGATAGCGAATGACAGA+TGG + chr6_2:30067516-30067535 Msa0914900:intron 45.0%
!! TATGACCTAGTCTTTTGGGG+TGG + chr6_2:30067613-30067632 Msa0914900:intron 45.0%
CGGAAAAGCTACTTATTGGC+TGG + chr6_2:30067693-30067712 Msa0914900:intron 45.0%
CCTTCACAAATTTCTCACGC+TGG - chr6_2:30067790-30067809 None:intergenic 45.0%
CCAGCGTGAGAAATTTGTGA+AGG + chr6_2:30067787-30067806 Msa0914900:intron 45.0%
CGATTGCAAATGGCAGAACA+TGG - chr6_2:30067874-30067893 None:intergenic 45.0%
! CTGACCATGTGGTAGCTTTT+TGG - chr6_2:30067946-30067965 None:intergenic 45.0%
CTCTATCAACACTGACCATG+TGG - chr6_2:30067957-30067976 None:intergenic 45.0%
GTAAAATCCGTCGTGGATGT+CGG + chr6_2:30067976-30067995 Msa0914900:intron 45.0%
CAATGTTATGAGTTCCACGC+CGG + chr6_2:30068014-30068033 Msa0914900:intron 45.0%
! AAAGACTAGCCACTAAGAGC+CGG - chr6_2:30068036-30068055 None:intergenic 45.0%
CTCTTGATACCTATGTCGCT+TGG + chr6_2:30068220-30068239 Msa0914900:CDS 45.0%
!! TTCTAGTTCCCAAGCGACAT+AGG - chr6_2:30068232-30068251 None:intergenic 45.0%
!! GCTCTGAAGCTATCCAAAGA+AGG - chr6_2:30068456-30068475 None:intergenic 45.0%
TGGATGTTAAGCAAGGGTCA+AGG + chr6_2:30068523-30068542 Msa0914900:CDS 45.0%
CAAGGGTCAAGGAAAGACAA+TGG + chr6_2:30068534-30068553 Msa0914900:CDS 45.0%
TTGACGAAGCAGAAGAGCTT+TGG + chr6_2:30068602-30068621 Msa0914900:CDS 45.0%
CAGTGCTACATAACCAAGAC+AGG + chr6_2:30068954-30068973 Msa0914900:intron 45.0%
! TCAGCTAAGGGCTATTTCAG+GGG - chr6_2:30069019-30069038 None:intergenic 45.0%
! GTTCAGCTAAGGGCTATTTC+AGG - chr6_2:30069021-30069040 None:intergenic 45.0%
AACAGAGGCAGAAAAGGGAT+AGG + chr6_2:30069153-30069172 Msa0914900:intron 45.0%
AGGCAGAAAAGGGATAGGAT+AGG + chr6_2:30069158-30069177 Msa0914900:intron 45.0%
TGCTGCAGATTTCCTGGAAA+TGG + chr6_2:30069231-30069250 Msa0914900:intron 45.0%
TCACGTCTTACTCCATTTCC+AGG - chr6_2:30069246-30069265 None:intergenic 45.0%
GAAATGGAGTAAGACGTGAG+TGG + chr6_2:30069247-30069266 Msa0914900:intron 45.0%
! CAAACACCGAGTTTTTCTCG+AGG + chr6_2:30069722-30069741 Msa0914900:intron 45.0%
GGACTTCCTCGAGAAAAACT+CGG - chr6_2:30069731-30069750 None:intergenic 45.0%
TCCAAACCAAGGAGAGGATA+GGG + chr6_2:30069748-30069767 Msa0914900:intron 45.0%
AAGGAGAGGATAGGGGTTTA+GGG + chr6_2:30069756-30069775 Msa0914900:intron 45.0%
TAAACATACGGCTCTGTCCT+TGG + chr6_2:30069857-30069876 Msa0914900:intron 45.0%
GTAGGTATTTGCAGACATGG+AGG + chr6_2:30070138-30070157 Msa0914900:intron 45.0%
GGAAATGTCTTCAAGGAGCT+AGG + chr6_2:30070202-30070221 Msa0914900:CDS 45.0%
CTTCAAGGAGCTAGGTATGA+TGG + chr6_2:30070210-30070229 Msa0914900:CDS 45.0%
CTATATTCCCATTGTGGTGG+TGG - chr6_2:30070265-30070284 None:intergenic 45.0%
GGACGATGAACAATTCGAAC+AGG + chr6_2:30070426-30070445 Msa0914900:CDS 45.0%
!! GGATGCCGATTTAATAGGCA+TGG + chr6_2:30070447-30070466 Msa0914900:CDS 45.0%
CTTACCTCGTAACAGCATGT+AGG - chr6_2:30070624-30070643 None:intergenic 45.0%
CTACATGCTGTTACGAGGTA+AGG + chr6_2:30070622-30070641 Msa0914900:three_prime_UTR 45.0%
CGAGGTAAGGTGAAGACATT+AGG + chr6_2:30070635-30070654 Msa0914900:three_prime_UTR 45.0%
ATGGCTACCACCAAATTCTC+AGG - chr6_2:30070694-30070713 None:intergenic 45.0%
!!! ATTTTTATGATTTTATTATA+AGG + chr6_2:30066744-30066763 Msa0914900:intron 5.0%
GGTGTGGAAGTGGATGATGA+TGG - chr6_2:30066473-30066492 None:intergenic 50.0%
!! CTGCTGATGTAAGGTTGGTG+TGG - chr6_2:30066489-30066508 None:intergenic 50.0%
!! TTACGGCCAGGTTTGGGTTT+TGG - chr6_2:30066539-30066558 None:intergenic 50.0%
CGAGATTTACGGCCAGGTTT+GGG - chr6_2:30066545-30066564 None:intergenic 50.0%
CCAAACCTGGCCGTAAATCT+CGG + chr6_2:30066543-30066562 Msa0914900:five_prime_UTR 50.0%
CAAACCTGGCCGTAAATCTC+GGG + chr6_2:30066544-30066563 Msa0914900:five_prime_UTR 50.0%
CTAACTCCGCCCGAGATTTA+CGG - chr6_2:30066556-30066575 None:intergenic 50.0%
TGGGTACATGTGTCGAACAC+CGG + chr6_2:30067020-30067039 Msa0914900:intron 50.0%
ACACGGCATGTGTTCGACAT+CGG - chr6_2:30067242-30067261 None:intergenic 50.0%
AAGTCACTGTGTCCTTTGGC+AGG + chr6_2:30067560-30067579 Msa0914900:intron 50.0%
AGTCACTGTGTCCTTTGGCA+GGG + chr6_2:30067561-30067580 Msa0914900:intron 50.0%
AGAGACCACCCCAAAAGACT+AGG - chr6_2:30067621-30067640 None:intergenic 50.0%
! TTTGGGGTGGTCTCTTTCCA+CGG + chr6_2:30067626-30067645 Msa0914900:intron 50.0%
TTAAGAGCCGACATCCACGA+CGG - chr6_2:30067986-30068005 None:intergenic 50.0%
!! GTGGATGTCGGCTCTTAAAG+AGG + chr6_2:30067988-30068007 Msa0914900:intron 50.0%
!! GATGTCGGCTCTTAAAGAGG+TGG + chr6_2:30067991-30068010 Msa0914900:intron 50.0%
GCTCTTCTGCTTCGTCAACT+CGG - chr6_2:30068600-30068619 None:intergenic 50.0%
CAGGATTGCTGCAGATTTCC+TGG + chr6_2:30069225-30069244 Msa0914900:intron 50.0%
GGAGTAAGACGTGAGTGGAA+TGG + chr6_2:30069252-30069271 Msa0914900:intron 50.0%
GTAAGACGTGAGTGGAATGG+AGG + chr6_2:30069255-30069274 Msa0914900:intron 50.0%
TCTCGAGGAAGTCCAAACCA+AGG + chr6_2:30069737-30069756 Msa0914900:intron 50.0%
AGGAAGTCCAAACCAAGGAG+AGG + chr6_2:30069742-30069761 Msa0914900:intron 50.0%
GTCCAAACCAAGGAGAGGAT+AGG + chr6_2:30069747-30069766 Msa0914900:intron 50.0%
CCAAACCAAGGAGAGGATAG+GGG + chr6_2:30069749-30069768 Msa0914900:intron 50.0%
CTAAACCCCTATCCTCTCCT+TGG - chr6_2:30069757-30069776 None:intergenic 50.0%
CAAGGAGAGGATAGGGGTTT+AGG + chr6_2:30069755-30069774 Msa0914900:intron 50.0%
CGTGTAAGAATCAGGGTGCA+AGG + chr6_2:30070301-30070320 Msa0914900:CDS 50.0%
GACTCCTACATGCTGTTACG+AGG + chr6_2:30070617-30070636 Msa0914900:three_prime_UTR 50.0%
ACTGTGGACTTCGCCATTTC+AGG - chr6_2:30070774-30070793 None:intergenic 50.0%
CCGAGATTTACGGCCAGGTT+TGG - chr6_2:30066546-30066565 None:intergenic 55.0%
AGCATTACTGCTTGTGGCGG+TGG - chr6_2:30066586-30066605 None:intergenic 55.0%
ACACATGCCGTGTCCAACAC+CGG + chr6_2:30067249-30067268 Msa0914900:intron 55.0%
! TGTCATGCCGGTGTTGGACA+CGG - chr6_2:30067259-30067278 None:intergenic 55.0%
CATGGACATCGGACACGACA+CGG - chr6_2:30067336-30067355 None:intergenic 55.0%
TAGTGAAGGGATGTCCGCCA+TGG - chr6_2:30067587-30067606 None:intergenic 55.0%
TTGGGGTGGTCTCTTTCCAC+GGG + chr6_2:30067627-30067646 Msa0914900:intron 55.0%
TCCAACACTGCGATCCAGCA+TGG - chr6_2:30067756-30067775 None:intergenic 55.0%
CCCCTATCCTCTCCTTGGTT+TGG - chr6_2:30069752-30069771 None:intergenic 55.0%
GAGAGGATAGGGGTTTAGGG+AGG + chr6_2:30069759-30069778 Msa0914900:intron 55.0%
TGCCCGCCAAAACCCAAACC+TGG + chr6_2:30066530-30066549 Msa0914900:five_prime_UTR 60.0%
!! GGCCAGGTTTGGGTTTTGGC+GGG - chr6_2:30066535-30066554 None:intergenic 60.0%
!! CGGCCAGGTTTGGGTTTTGG+CGG - chr6_2:30066536-30066555 None:intergenic 60.0%
ACCTGGCCGTAAATCTCGGG+CGG + chr6_2:30066547-30066566 Msa0914900:five_prime_UTR 60.0%
!! TGTCGGTGTCATGCCGGTGT+TGG - chr6_2:30067265-30067284 None:intergenic 60.0%
TGTGTCCTTTGGCAGGGCCA+TGG + chr6_2:30067567-30067586 Msa0914900:intron 60.0%
GCCATGCTGGATCGCAGTGT+TGG + chr6_2:30067752-30067771 Msa0914900:intron 60.0%
TGTGAAGGATGCCGGCACCA+TGG + chr6_2:30067802-30067821 Msa0914900:intron 60.0%
!! AGTTCCACGCCGGCTCTTAG+TGG + chr6_2:30068024-30068043 Msa0914900:intron 60.0%
TCCGCCCGAGATTTACGGCC+AGG - chr6_2:30066551-30066570 None:intergenic 65.0%
CTGCTTGTGGCGGTGGCTGA+TGG - chr6_2:30066579-30066598 None:intergenic 65.0%
GTCCTTTGGCAGGGCCATGG+CGG + chr6_2:30067570-30067589 Msa0914900:intron 65.0%
CTAGCCACTAAGAGCCGGCG+TGG - chr6_2:30068031-30068050 None:intergenic 65.0%
GTCCGCCATGGCCCTGCCAA+AGG - chr6_2:30067575-30067594 None:intergenic 70.0%
Chromosome Type Strat End Strand Name
chr6_2 gene 30066428 30071066 30066428 ID=Msa0914900;Name=Msa0914900
chr6_2 mRNA 30066428 30071066 30066428 ID=Msa0914900-mRNA-1;Parent=Msa0914900;Name=Msa0914900-mRNA-1;_AED=0.11;_eAED=0.11;_QI=173|0.5|0.6|1|0.5|0.6|5|538|289
chr6_2 exon 30066428 30066681 30066428 ID=Msa0914900-mRNA-1:exon:5447;Parent=Msa0914900-mRNA-1
chr6_2 exon 30066766 30066858 30066766 ID=Msa0914900-mRNA-1:exon:5448;Parent=Msa0914900-mRNA-1
chr6_2 exon 30068180 30068275 30068180 ID=Msa0914900-mRNA-1:exon:5449;Parent=Msa0914900-mRNA-1
chr6_2 exon 30068514 30068726 30068514 ID=Msa0914900-mRNA-1:exon:5450;Parent=Msa0914900-mRNA-1
chr6_2 exon 30070142 30071066 30070142 ID=Msa0914900-mRNA-1:exon:5451;Parent=Msa0914900-mRNA-1
chr6_2 five_prime_UTR 30066428 30066600 30066428 ID=Msa0914900-mRNA-1:five_prime_utr;Parent=Msa0914900-mRNA-1
chr6_2 CDS 30066601 30066681 30066601 ID=Msa0914900-mRNA-1:cds;Parent=Msa0914900-mRNA-1
chr6_2 CDS 30066766 30066858 30066766 ID=Msa0914900-mRNA-1:cds;Parent=Msa0914900-mRNA-1
chr6_2 CDS 30068180 30068275 30068180 ID=Msa0914900-mRNA-1:cds;Parent=Msa0914900-mRNA-1
chr6_2 CDS 30068514 30068726 30068514 ID=Msa0914900-mRNA-1:cds;Parent=Msa0914900-mRNA-1
chr6_2 CDS 30070142 30070528 30070142 ID=Msa0914900-mRNA-1:cds;Parent=Msa0914900-mRNA-1
chr6_2 three_prime_UTR 30070529 30071066 30070529 ID=Msa0914900-mRNA-1:three_prime_utr;Parent=Msa0914900-mRNA-1
Gene Sequence

>Msa0914900

ATGCTTTCACTCATTAATTCGCCTCTACTTATTGCTAAACCATACCAACAAATTAACATATCAAATAAACGAAGCATTGTTGTATTTGCTGCTGCAAAAGGTCCAAGACCAAGATATCCTCGAGTTTGGAAGACTAATAAAAAAATTGGAACTATTTCTAAGGCTGCTAAGCTTATTAAAGAACTTTCAAATGTCAAAGAAGAAGTTTATGGAGCTCTTGATACCTATGTCGCTTGGGAACTAGAATTTCCTATAATTACAGTGAAAAAGGTAACAAAATGGATGTTAAGCAAGGGTCAAGGAAAGACAATGGGAAGCTATTTTACATTACTTAATGCTTTAGCAGAGGATGACCGAGTTGACGAAGCAGAAGAGCTTTGGACAAAGTTGTTAATGCAGTACACGGAAAGCTTGCCACGTAGATTCTTTGATAAAATGATATCTATCTACTGTAAAAGAGGCTTGCATGATAAGATGTTTGAGGTATTTGCAGACATGGAGGAGCTCAGTGTTAAACCTAGTAGTTCTGTTGTCTCAATGGTTGGAAATGTCTTCAAGGAGCTAGGTATGATGGATAAATACGAGAAGTTACATCAAAAATATCCACCACCACAATGGGAATATAGATACATCAAAGGAAAGCGTGTAAGAATCAGGGTGCAAGGTCAGCCTAATAAAGTTGATAGATACGTAAGAAAGCAGGACAATGTTCAACGAAATTCAGGCTTAAGAGAGGAAGATAGTTCAGAAGAGACTTCAGAGTTAACGGACGATGAACAATTCGAACAGGATGCCGATTTAATAGGCATGGAAACCAAACAAATTTCAGATGAGTCATCTGAGTTTACGGAACCAAGTTTAGATGTATAA
Protein sequence

>Msa0914900

MLSLINSPLLIAKPYQQINISNKRSIVVFAAAKGPRPRYPRVWKTNKKIGTISKAAKLIKELSNVKEEVYGALDTYVAWELEFPIITVKKVTKWMLSKGQGKTMGSYFTLLNALAEDDRVDEAEELWTKLLMQYTESLPRRFFDKMISIYCKRGLHDKMFEVFADMEELSVKPSSSVVSMVGNVFKELGMMDKYEKLHQKYPPPQWEYRYIKGKRVRIRVQGQPNKVDRYVRKQDNVQRNSGLREEDSSEETSELTDDEQFEQDADLIGMETKQISDESSEFTEPSLDV*