AlfalfaGEDB Alfalfa Gene Editing Database

M. sativa cultivar zhongmu-4 / Msa1352290


Query id Subject id identity % alignment length mismatches gap openings q. start q. end s. start s. end e-value bit score
Msa1352290 MtrunA17_Chr8g0389851 91.002 589 35 2 1 588 1 572 0.0 1050
Query id Subject id identity % alignment length mismatches gap openings q. start q. end s. start s. end e-value bit score
Msa1352290 AT2G19870.1 65.672 402 113 5 185 575 200 587 2.17e-177 514

Find 151 sgRNAs with CRISPR-Local

Find 356 sgRNAs with CRISPR-GE


CRISPR-Local

CRISPR-Local
sgRNA_sequence on_target_score Position Region
TTTGGGTTGCGAAGATATTT+TGG 0.207278 tig0012581:-159980 None:intergenic
GTGCTTCTTCATCATTTAAT+TGG 0.212312 tig0012581:+161629 Msa1352290:CDS
GGTGACTGATCCTCAGAATT+TGG 0.221183 tig0012581:+161145 Msa1352290:CDS
TTCATCATTTAATTGGTAAA+AGG 0.248065 tig0012581:+161636 Msa1352290:CDS
GAGAGGAAAGTGGTGAAAAT+TGG 0.249494 tig0012581:-160032 None:intergenic
TCCACCGACTATTCTTGTTT+TGG 0.250256 tig0012581:+161406 Msa1352290:CDS
ATCTTTACAAACCCCAGATA+TGG 0.252491 tig0012581:+160066 Msa1352290:CDS
TTGTAGCATCAACCCATATC+TGG 0.258177 tig0012581:-160079 None:intergenic
ATTCAATGAAATCGCTTTAG+AGG 0.276688 tig0012581:-161369 None:intergenic
ATATGGGGTTGGTCCGGTTT+TGG 0.283851 tig0012581:+160821 Msa1352290:CDS
GAGTGGAAATGCTTGGGTTT+TGG 0.297903 tig0012581:-159953 None:intergenic
CTATCCCATCTTCGAAATTC+CGG 0.303948 tig0012581:-160723 None:intergenic
AACTATCGCGGTAGTAGATA+TGG 0.304627 tig0012581:+160408 Msa1352290:CDS
ATGGGATAGGAATGAGAATT+GGG 0.304875 tig0012581:+160737 Msa1352290:CDS
GTGACTGATCCTCAGAATTT+GGG 0.308960 tig0012581:+161146 Msa1352290:CDS
TGAAGTTAAGGAAGATAAAA+TGG 0.309296 tig0012581:+160164 Msa1352290:CDS
GGAGAGTGAATTGAAGCATT+TGG 0.309472 tig0012581:-159998 None:intergenic
GGGCACTGGTTTGAGGCCTT+TGG 0.313891 tig0012581:+161436 Msa1352290:CDS
ATTGTTGGTGAAGGAATATA+TGG 0.317938 tig0012581:+160804 Msa1352290:CDS
GAGAGTGAATTGAAGCATTT+GGG 0.337657 tig0012581:-159997 None:intergenic
TTAGTGTCTTCAGCCGAAAA+TGG 0.342593 tig0012581:+161320 Msa1352290:CDS
GGGTTCTCTTTGGGTAGCTT+TGG 0.344118 tig0012581:+161118 Msa1352290:CDS
ACTCAGTTGGTTAAAATTGC+TGG 0.346577 tig0012581:+161473 Msa1352290:CDS
ATCAAAGCATGATTTGAATA+TGG 0.349024 tig0012581:+160995 Msa1352290:CDS
CAAAAGGTGGTGTTTCTGAT+AGG 0.351351 tig0012581:+160343 Msa1352290:CDS
AGGAAGGAAAGGGTTCTCTT+TGG 0.354350 tig0012581:+161108 Msa1352290:CDS
GAAAATGGTTGGCGAGTTCT+TGG 0.366846 tig0012581:+161335 Msa1352290:CDS
GAAGGGGTGGTTGGAGGCAG+AGG 0.368357 tig0012581:+160687 Msa1352290:CDS
CTTGGGAACAATCAGTTGAT+AGG 0.368906 tig0012581:+160262 Msa1352290:CDS
AACACGCGCTTTGACAAATA+TGG 0.370111 tig0012581:+160510 Msa1352290:CDS
ATTCCTTCACCAACAATCTT+AGG 0.371901 tig0012581:-160798 None:intergenic
TGGATTTAAGTAGCAACAAT+AGG 0.376931 tig0012581:+160898 Msa1352290:CDS
AATGGTGAAAATACATGAAT+TGG 0.386914 tig0012581:+161070 Msa1352290:CDS
AGATGCTTCACCACTTGAAA+TGG 0.390011 tig0012581:+161052 Msa1352290:CDS
CACTGGTTTGAGGCCTTTGG+TGG 0.390317 tig0012581:+161439 Msa1352290:CDS
GATGGGATAGGAATGAGAAT+TGG 0.394591 tig0012581:+160736 Msa1352290:CDS
TTTCCTTCCTCAATAGAAAC+AGG 0.398608 tig0012581:-161095 None:intergenic
GTTAGAAACAAATGAAGTTA+AGG 0.403040 tig0012581:+160152 Msa1352290:CDS
GGAAGGAAAGGGTTCTCTTT+GGG 0.408128 tig0012581:+161109 Msa1352290:CDS
AAGGTCTGTAGATTCTTTGC+CGG 0.408230 tig0012581:+161655 Msa1352290:CDS
TGCAGGCTCACTTGAATTGA+TGG 0.409606 tig0012581:+161265 Msa1352290:CDS
GGTTGGAGGCAGAGGTGGAT+TGG 0.419961 tig0012581:+160695 Msa1352290:CDS
TGAAATAGAGGATGAGGTAG+AGG 0.420378 tig0012581:+160620 Msa1352290:CDS
AACAGGTTTGAAGGGGTGGT+TGG 0.425007 tig0012581:+160678 Msa1352290:CDS
ATATCTGGGGTTTGTAAAGA+TGG 0.425449 tig0012581:-160064 None:intergenic
TAACCGACCTCATCAAGGTT+TGG 0.432198 tig0012581:+161025 Msa1352290:CDS
TTCTTTATGTTATCCCACCT+TGG 0.433598 tig0012581:-160657 None:intergenic
TCTTTACAAACCCCAGATAT+GGG 0.434522 tig0012581:+160067 Msa1352290:CDS
ACCTTGATGAGGTCGGTTAT+CGG 0.435923 tig0012581:-161021 None:intergenic
AAGAGTTGATGATGAAATAG+AGG 0.441508 tig0012581:+160608 Msa1352290:CDS
ATGGGAAGTTTGATGATAAG+AGG 0.445575 tig0012581:+160427 Msa1352290:CDS
AAATGGTTGAGAAAGCAAAA+AGG 0.446800 tig0012581:+160181 Msa1352290:CDS
AACATAAAGAACAGGTTTGA+AGG 0.449000 tig0012581:+160669 Msa1352290:CDS
AAGAATGGTTTGGTTGAGAA+TGG 0.449455 tig0012581:+160372 Msa1352290:CDS
TCAAGAGGATTCAGCTAAGA+AGG 0.452042 tig0012581:+160224 Msa1352290:CDS
TCTGATAGGGAAAGGAAGAA+TGG 0.456281 tig0012581:+160357 Msa1352290:CDS
GCAGTGAGGGCACTGGTTTG+AGG 0.457860 tig0012581:+161429 Msa1352290:CDS
TGATGATGAAATAGAGGATG+AGG 0.459116 tig0012581:+160614 Msa1352290:CDS
TAGGGAAAGGAAGAATGGTT+TGG 0.459411 tig0012581:+160362 Msa1352290:CDS
AGGGGAGTGTTAAGTCCTCT+TGG 0.461457 tig0012581:+160244 Msa1352290:CDS
GGGGTGGTTGGAGGCAGAGG+TGG 0.463273 tig0012581:+160690 Msa1352290:CDS
AGGAAGAAGAAGGATAAGAA+AGG 0.464408 tig0012581:+160918 Msa1352290:CDS
TGTAGCATCAACCCATATCT+GGG 0.464556 tig0012581:-160078 None:intergenic
AATAGAGGATGAGGTAGAGG+AGG 0.466450 tig0012581:+160623 Msa1352290:CDS
TTAAATGTTAGTGTAGCAAC+AGG 0.467333 tig0012581:+161605 Msa1352290:CDS
GCTGATAATGCAGCCAAAAC+CGG 0.467466 tig0012581:-160834 None:intergenic
TGGATACGAGTGGAAATGCT+TGG 0.468330 tig0012581:-159960 None:intergenic
ATGGGAAATTTGATGATAAG+AGG 0.470031 tig0012581:+160478 Msa1352290:CDS
AACGCACTCTTTGACAGGTA+TGG 0.470608 tig0012581:+160459 Msa1352290:CDS
GGATACGAGTGGAAATGCTT+GGG 0.476032 tig0012581:-159959 None:intergenic
GGCTTAAATTCTGAAACTGT+TGG 0.480882 tig0012581:-160294 None:intergenic
TTCACCTTCTAATTCATCAC+TGG 0.486683 tig0012581:-161519 None:intergenic
AGGAATATATGGGGTTGGTC+CGG 0.486780 tig0012581:+160815 Msa1352290:CDS
GGAAGAAGAAGGATAAGAAA+GGG 0.487682 tig0012581:+160919 Msa1352290:CDS
AGGTTTGAAGGGGTGGTTGG+AGG 0.490484 tig0012581:+160681 Msa1352290:CDS
CTGCATTATCAGCTGGAAGA+AGG 0.491724 tig0012581:+160844 Msa1352290:CDS
AACACACGCTCTGATAGATA+TGG 0.493170 tig0012581:+160561 Msa1352290:CDS
GTTTGAGAGGGTTCTAAAGA+TGG 0.495191 tig0012581:+160941 Msa1352290:CDS
AGTACCAGTGATGAATTAGA+AGG 0.495253 tig0012581:+161515 Msa1352290:CDS
ATTGGAACCTGTTTCTATTG+AGG 0.499018 tig0012581:+161088 Msa1352290:CDS
AGGATAAGAAAGGGTTTGAG+AGG 0.499280 tig0012581:+160928 Msa1352290:CDS
GGTGGGATAACATAAAGAAC+AGG 0.505350 tig0012581:+160661 Msa1352290:CDS
GTGCCGAAAAGCAACTTCCT+TGG 0.506599 tig0012581:+160130 Msa1352290:CDS
GTTTCTATTGAGGAAGGAAA+GGG 0.506660 tig0012581:+161098 Msa1352290:CDS
AAGGCTGATTCCCGTGATCT+CGG 0.513099 tig0012581:-160315 None:intergenic
TCTACTGTGCCTAAGATTGT+TGG 0.513554 tig0012581:+160789 Msa1352290:CDS
ACTATCGCGGTAGTAGATAT+GGG 0.514868 tig0012581:+160409 Msa1352290:CDS
AGAATTTAAGCCGAGATCAC+GGG 0.516449 tig0012581:+160305 Msa1352290:CDS
CGGAATTTCGAAGATGGGAT+AGG 0.516595 tig0012581:+160724 Msa1352290:CDS
TTGCTAACAACACCACTCAA+TGG 0.517461 tig0012581:-161236 None:intergenic
CAGAATTTAAGCCGAGATCA+CGG 0.517505 tig0012581:+160304 Msa1352290:CDS
GGGGAGTGTTAAGTCCTCTT+GGG 0.518971 tig0012581:+160245 Msa1352290:CDS
CTAGCAACGCACTCTTTGAC+AGG 0.519621 tig0012581:+160454 Msa1352290:CDS
CAAGAGGATTCAGCTAAGAA+GGG 0.522670 tig0012581:+160225 Msa1352290:CDS
AGGGCTCTCGCAATTTAAAC+CGG 0.524607 tig0012581:-161546 None:intergenic
TGCATTATCAGCTGGAAGAA+GGG 0.526271 tig0012581:+160845 Msa1352290:CDS
TTGTTGGTGAAGGAATATAT+GGG 0.526684 tig0012581:+160805 Msa1352290:CDS
AATATGGTAAATTTGATGAC+AGG 0.528608 tig0012581:+160526 Msa1352290:CDS
AATGAAAGGAACTCTTTACC+AGG 0.531611 tig0012581:-161566 None:intergenic
GAACCTGTTTCTATTGAGGA+AGG 0.531799 tig0012581:+161092 Msa1352290:CDS
ATAGAGGATGAGGTAGAGGA+GGG 0.532626 tig0012581:+160624 Msa1352290:CDS
GGTTTAAATTGCGAGAGCCC+TGG 0.537733 tig0012581:+161548 Msa1352290:CDS
ACGCACTCTTTGACAGGTAT+GGG 0.538109 tig0012581:+160460 Msa1352290:CDS
ACAAGAATAGTCGGTGGACC+AGG 0.539499 tig0012581:-161401 None:intergenic
TGTTTCTATTGAGGAAGGAA+AGG 0.540500 tig0012581:+161097 Msa1352290:CDS
AAAAGGTGGTGTTTCTGATA+GGG 0.542620 tig0012581:+160344 Msa1352290:CDS
TAGCAACAATAGGAAGAAGA+AGG 0.545364 tig0012581:+160908 Msa1352290:CDS
GGATAAGAAAGGGTTTGAGA+GGG 0.548500 tig0012581:+160929 Msa1352290:CDS
ACATAAAGAACAGGTTTGAA+GGG 0.550590 tig0012581:+160670 Msa1352290:CDS
TCATTGAATGAGATTGAACC+TGG 0.551962 tig0012581:+161383 Msa1352290:CDS
AATGGTTGGCGAGTTCTTGG+TGG 0.554386 tig0012581:+161338 Msa1352290:CDS
TCTTTGGGTAGCTTTGGATG+AGG 0.554762 tig0012581:+161124 Msa1352290:CDS
AAAGAACAGGTTTGAAGGGG+TGG 0.558809 tig0012581:+160674 Msa1352290:CDS
GAATTAGAAGGTGAAAGTAC+CGG 0.562679 tig0012581:+161527 Msa1352290:CDS
TGTTAGAAGCTCTATTCAAG+AGG 0.569050 tig0012581:+160209 Msa1352290:CDS
TGTCTTCAGCCGAAAATGGT+TGG 0.569832 tig0012581:+161324 Msa1352290:CDS
AAAACCGGAATTTCGAAGAT+GGG 0.573277 tig0012581:+160719 Msa1352290:CDS
GTTGTTAGCAAAGCAAGTGC+AGG 0.576145 tig0012581:+161248 Msa1352290:CDS
ATTGTATGTGCAACAAGGGT+TGG 0.578953 tig0012581:+160878 Msa1352290:CDS
TGGGATAGGAATGAGAATTG+GGG 0.582523 tig0012581:+160738 Msa1352290:CDS
ACTTCATTTGTTTCTAACCA+AGG 0.587852 tig0012581:-160147 None:intergenic
TATGCATTGTATGTGCAACA+AGG 0.588944 tig0012581:+160873 Msa1352290:CDS
ACCGATAACCGACCTCATCA+AGG 0.589227 tig0012581:+161020 Msa1352290:CDS
GGAGAGATCATGTACTCAGT+TGG 0.591924 tig0012581:+161460 Msa1352290:CDS
AGGAGGGTGTTGATGATCCA+AGG 0.596771 tig0012581:+160640 Msa1352290:CDS
GGTGAAGGAATATATGGGGT+TGG 0.605307 tig0012581:+160810 Msa1352290:CDS
TGACTGATCCTCAGAATTTG+GGG 0.608000 tig0012581:+161147 Msa1352290:CDS
GTGGTGTTTCTGATAGGGAA+AGG 0.611587 tig0012581:+160349 Msa1352290:CDS
CTGCCCAAAACAAGAATAGT+CGG 0.613868 tig0012581:-161410 None:intergenic
TCACTGGTACTTAAGTCTGA+AGG 0.626035 tig0012581:-161503 None:intergenic
ATGGTAAATTTGATGACAGG+AGG 0.626340 tig0012581:+160529 Msa1352290:CDS
AAGAGGATTCAGCTAAGAAG+GGG 0.627469 tig0012581:+160226 Msa1352290:CDS
AAACCAAACCTTGATGAGGT+CGG 0.629144 tig0012581:-161028 None:intergenic
AAGAATTCAGCTCCATTGAG+TGG 0.632763 tig0012581:+161224 Msa1352290:CDS
CATAAAGAACAGGTTTGAAG+GGG 0.634813 tig0012581:+160671 Msa1352290:CDS
GTACATGATCTCTCCACCAA+AGG 0.638656 tig0012581:-161452 None:intergenic
GTAGCATCAACCCATATCTG+GGG 0.640827 tig0012581:-160077 None:intergenic
GGGTGTTGATGATCCAAGGT+GGG 0.646275 tig0012581:+160644 Msa1352290:CDS
ATCAACTGATTGTTCCCAAG+AGG 0.647199 tig0012581:-160259 None:intergenic
GGGTAGAAAGACATGGCAAG+AGG 0.647888 tig0012581:+160758 Msa1352290:CDS
TAAAGTTGATGATAATGTTG+AGG 0.652967 tig0012581:+160584 Msa1352290:CDS
GTGCCTAAGATTGTTGGTGA+AGG 0.658684 tig0012581:+160795 Msa1352290:CDS
TGTTGGTGAAGGAATATATG+GGG 0.659943 tig0012581:+160806 Msa1352290:CDS
ATGAAAGGAACTCTTTACCA+GGG 0.662091 tig0012581:-161565 None:intergenic
AGAATTGGGGTAGAAAGACA+TGG 0.667470 tig0012581:+160751 Msa1352290:CDS
TCTAAAACCAAACCTTGATG+AGG 0.673105 tig0012581:-161032 None:intergenic
CCCAAAACAAGAATAGTCGG+TGG 0.677904 tig0012581:-161407 None:intergenic
ATGCATTGTATGTGCAACAA+GGG 0.683300 tig0012581:+160874 Msa1352290:CDS
AGGGTGTTGATGATCCAAGG+TGG 0.702862 tig0012581:+160643 Msa1352290:CDS
GACTGATCCTCAGAATTTGG+GGG 0.715259 tig0012581:+161148 Msa1352290:CDS
AGAGAGCATAGAAACTATCG+CGG 0.742148 tig0012581:+160396 Msa1352290:CDS

CRISPR-GE

badsite warning sgRNA_sequence Strand Position Region GC_content
!!! TGAAAATTGGATTTTTAAAG+AGG - tig0012581:160022-160041 None:intergenic 20.0%
!!! ATTAGGTCTTCATATTTTTT+TGG + tig0012581:161176-161195 Msa1352290:CDS 20.0%
!! TTCATCATTTAATTGGTAAA+AGG + tig0012581:161636-161655 Msa1352290:CDS 20.0%
!!! TGAAAATTGGATTTTTAAAG+AGG - tig0012581:160022-160041 None:intergenic 20.0%
!!! ATTAGGTCTTCATATTTTTT+TGG + tig0012581:161176-161195 Msa1352290:CDS 20.0%
!! TTCATCATTTAATTGGTAAA+AGG + tig0012581:161636-161655 Msa1352290:CDS 20.0%
!!! AAAGATGGATTTTTTATGAG+AGG - tig0012581:160052-160071 None:intergenic 25.0%
! GTTAGAAACAAATGAAGTTA+AGG + tig0012581:160152-160171 Msa1352290:CDS 25.0%
! TGAAGTTAAGGAAGATAAAA+TGG + tig0012581:160164-160183 Msa1352290:CDS 25.0%
!! AATATGGTAAATTTGATGAC+AGG + tig0012581:160526-160545 Msa1352290:CDS 25.0%
!!! TAAAGTTGATGATAATGTTG+AGG + tig0012581:160584-160603 Msa1352290:CDS 25.0%
! ATCAAAGCATGATTTGAATA+TGG + tig0012581:160995-161014 Msa1352290:CDS 25.0%
! AATGGTGAAAATACATGAAT+TGG + tig0012581:161070-161089 Msa1352290:CDS 25.0%
!! TAAAGAGTTCCTTTCATTTT+TGG + tig0012581:161571-161590 Msa1352290:CDS 25.0%
!!! AAAGATGGATTTTTTATGAG+AGG - tig0012581:160052-160071 None:intergenic 25.0%
! GTTAGAAACAAATGAAGTTA+AGG + tig0012581:160152-160171 Msa1352290:CDS 25.0%
! TGAAGTTAAGGAAGATAAAA+TGG + tig0012581:160164-160183 Msa1352290:CDS 25.0%
!! AATATGGTAAATTTGATGAC+AGG + tig0012581:160526-160545 Msa1352290:CDS 25.0%
!!! TAAAGTTGATGATAATGTTG+AGG + tig0012581:160584-160603 Msa1352290:CDS 25.0%
! ATCAAAGCATGATTTGAATA+TGG + tig0012581:160995-161014 Msa1352290:CDS 25.0%
! AATGGTGAAAATACATGAAT+TGG + tig0012581:161070-161089 Msa1352290:CDS 25.0%
!! TAAAGAGTTCCTTTCATTTT+TGG + tig0012581:161571-161590 Msa1352290:CDS 25.0%
!!! GATTTTTTATGAGAGGAAAG+TGG - tig0012581:160045-160064 None:intergenic 30.0%
!! ACTTCATTTGTTTCTAACCA+AGG - tig0012581:160150-160169 None:intergenic 30.0%
AAATGGTTGAGAAAGCAAAA+AGG + tig0012581:160181-160200 Msa1352290:CDS 30.0%
! ATGGGAAATTTGATGATAAG+AGG + tig0012581:160478-160497 Msa1352290:CDS 30.0%
!! AAGAGTTGATGATGAAATAG+AGG + tig0012581:160608-160627 Msa1352290:CDS 30.0%
AACATAAAGAACAGGTTTGA+AGG + tig0012581:160669-160688 Msa1352290:CDS 30.0%
ACATAAAGAACAGGTTTGAA+GGG + tig0012581:160670-160689 Msa1352290:CDS 30.0%
! ATTGTTGGTGAAGGAATATA+TGG + tig0012581:160804-160823 Msa1352290:CDS 30.0%
! TTGTTGGTGAAGGAATATAT+GGG + tig0012581:160805-160824 Msa1352290:CDS 30.0%
TGGATTTAAGTAGCAACAAT+AGG + tig0012581:160898-160917 Msa1352290:CDS 30.0%
! TGTATTTTCACCATTTCAAG+TGG - tig0012581:161065-161084 None:intergenic 30.0%
!!! TCATATTTTTTTGGAGCTAC+TGG + tig0012581:161185-161204 Msa1352290:CDS 30.0%
ATTCAATGAAATCGCTTTAG+AGG - tig0012581:161372-161391 None:intergenic 30.0%
TTAAATGTTAGTGTAGCAAC+AGG + tig0012581:161605-161624 Msa1352290:CDS 30.0%
GTGCTTCTTCATCATTTAAT+TGG + tig0012581:161629-161648 Msa1352290:CDS 30.0%
!!! GATTTTTTATGAGAGGAAAG+TGG - tig0012581:160045-160064 None:intergenic 30.0%
!! ACTTCATTTGTTTCTAACCA+AGG - tig0012581:160150-160169 None:intergenic 30.0%
AAATGGTTGAGAAAGCAAAA+AGG + tig0012581:160181-160200 Msa1352290:CDS 30.0%
! ATGGGAAATTTGATGATAAG+AGG + tig0012581:160478-160497 Msa1352290:CDS 30.0%
!! AAGAGTTGATGATGAAATAG+AGG + tig0012581:160608-160627 Msa1352290:CDS 30.0%
AACATAAAGAACAGGTTTGA+AGG + tig0012581:160669-160688 Msa1352290:CDS 30.0%
ACATAAAGAACAGGTTTGAA+GGG + tig0012581:160670-160689 Msa1352290:CDS 30.0%
! ATTGTTGGTGAAGGAATATA+TGG + tig0012581:160804-160823 Msa1352290:CDS 30.0%
! TTGTTGGTGAAGGAATATAT+GGG + tig0012581:160805-160824 Msa1352290:CDS 30.0%
TGGATTTAAGTAGCAACAAT+AGG + tig0012581:160898-160917 Msa1352290:CDS 30.0%
! TGTATTTTCACCATTTCAAG+TGG - tig0012581:161065-161084 None:intergenic 30.0%
!!! TCATATTTTTTTGGAGCTAC+TGG + tig0012581:161185-161204 Msa1352290:CDS 30.0%
ATTCAATGAAATCGCTTTAG+AGG - tig0012581:161372-161391 None:intergenic 30.0%
TTAAATGTTAGTGTAGCAAC+AGG + tig0012581:161605-161624 Msa1352290:CDS 30.0%
GTGCTTCTTCATCATTTAAT+TGG + tig0012581:161629-161648 Msa1352290:CDS 30.0%
!! GAAGATATTTTGGATACGAG+TGG - tig0012581:159973-159992 None:intergenic 35.0%
!!! TTTGGGTTGCGAAGATATTT+TGG - tig0012581:159983-160002 None:intergenic 35.0%
! GAGAGTGAATTGAAGCATTT+GGG - tig0012581:160000-160019 None:intergenic 35.0%
! ATATCTGGGGTTTGTAAAGA+TGG - tig0012581:160067-160086 None:intergenic 35.0%
ATCTTTACAAACCCCAGATA+TGG + tig0012581:160066-160085 Msa1352290:CDS 35.0%
TCTTTACAAACCCCAGATAT+GGG + tig0012581:160067-160086 Msa1352290:CDS 35.0%
!!! TAACCAAGGAAGTTGCTTTT+CGG - tig0012581:160136-160155 None:intergenic 35.0%
TGTTAGAAGCTCTATTCAAG+AGG + tig0012581:160209-160228 Msa1352290:CDS 35.0%
!! GGCTTAAATTCTGAAACTGT+TGG - tig0012581:160297-160316 None:intergenic 35.0%
! AAAAGGTGGTGTTTCTGATA+GGG + tig0012581:160344-160363 Msa1352290:CDS 35.0%
!! AAGAATGGTTTGGTTGAGAA+TGG + tig0012581:160372-160391 Msa1352290:CDS 35.0%
! ATGGGAAGTTTGATGATAAG+AGG + tig0012581:160427-160446 Msa1352290:CDS 35.0%
! ATGGTAAATTTGATGACAGG+AGG + tig0012581:160529-160548 Msa1352290:CDS 35.0%
! TGATGATGAAATAGAGGATG+AGG + tig0012581:160614-160633 Msa1352290:CDS 35.0%
TTCTTTATGTTATCCCACCT+TGG - tig0012581:160660-160679 None:intergenic 35.0%
CATAAAGAACAGGTTTGAAG+GGG + tig0012581:160671-160690 Msa1352290:CDS 35.0%
AAAAACCGGAATTTCGAAGA+TGG + tig0012581:160718-160737 Msa1352290:CDS 35.0%
AAAACCGGAATTTCGAAGAT+GGG + tig0012581:160719-160738 Msa1352290:CDS 35.0%
ATGGGATAGGAATGAGAATT+GGG + tig0012581:160737-160756 Msa1352290:CDS 35.0%
ATTCCTTCACCAACAATCTT+AGG - tig0012581:160801-160820 None:intergenic 35.0%
! TGTTGGTGAAGGAATATATG+GGG + tig0012581:160806-160825 Msa1352290:CDS 35.0%
TATGCATTGTATGTGCAACA+AGG + tig0012581:160873-160892 Msa1352290:CDS 35.0%
ATGCATTGTATGTGCAACAA+GGG + tig0012581:160874-160893 Msa1352290:CDS 35.0%
TAGCAACAATAGGAAGAAGA+AGG + tig0012581:160908-160927 Msa1352290:CDS 35.0%
AGGAAGAAGAAGGATAAGAA+AGG + tig0012581:160918-160937 Msa1352290:CDS 35.0%
GGAAGAAGAAGGATAAGAAA+GGG + tig0012581:160919-160938 Msa1352290:CDS 35.0%
! TCTAAAACCAAACCTTGATG+AGG - tig0012581:161035-161054 None:intergenic 35.0%
!! ATTGGAACCTGTTTCTATTG+AGG + tig0012581:161088-161107 Msa1352290:CDS 35.0%
TTTCCTTCCTCAATAGAAAC+AGG - tig0012581:161098-161117 None:intergenic 35.0%
! TGTTTCTATTGAGGAAGGAA+AGG + tig0012581:161097-161116 Msa1352290:CDS 35.0%
GTTTCTATTGAGGAAGGAAA+GGG + tig0012581:161098-161117 Msa1352290:CDS 35.0%
AGAATTTGGGGGCAATTATT+AGG + tig0012581:161159-161178 Msa1352290:CDS 35.0%
TCATTGAATGAGATTGAACC+TGG + tig0012581:161383-161402 Msa1352290:CDS 35.0%
ACTCAGTTGGTTAAAATTGC+TGG + tig0012581:161473-161492 Msa1352290:CDS 35.0%
AGTACCAGTGATGAATTAGA+AGG + tig0012581:161515-161534 Msa1352290:CDS 35.0%
TTCACCTTCTAATTCATCAC+TGG - tig0012581:161522-161541 None:intergenic 35.0%
! GAATTAGAAGGTGAAAGTAC+CGG + tig0012581:161527-161546 Msa1352290:CDS 35.0%
ATGAAAGGAACTCTTTACCA+GGG - tig0012581:161568-161587 None:intergenic 35.0%
AATGAAAGGAACTCTTTACC+AGG - tig0012581:161569-161588 None:intergenic 35.0%
TTTCCACAGCCAAAAATGAA+AGG - tig0012581:161583-161602 None:intergenic 35.0%
!! GAAGATATTTTGGATACGAG+TGG - tig0012581:159973-159992 None:intergenic 35.0%
!!! TTTGGGTTGCGAAGATATTT+TGG - tig0012581:159983-160002 None:intergenic 35.0%
! GAGAGTGAATTGAAGCATTT+GGG - tig0012581:160000-160019 None:intergenic 35.0%
! ATATCTGGGGTTTGTAAAGA+TGG - tig0012581:160067-160086 None:intergenic 35.0%
ATCTTTACAAACCCCAGATA+TGG + tig0012581:160066-160085 Msa1352290:CDS 35.0%
TCTTTACAAACCCCAGATAT+GGG + tig0012581:160067-160086 Msa1352290:CDS 35.0%
!!! TAACCAAGGAAGTTGCTTTT+CGG - tig0012581:160136-160155 None:intergenic 35.0%
TGTTAGAAGCTCTATTCAAG+AGG + tig0012581:160209-160228 Msa1352290:CDS 35.0%
!! GGCTTAAATTCTGAAACTGT+TGG - tig0012581:160297-160316 None:intergenic 35.0%
! AAAAGGTGGTGTTTCTGATA+GGG + tig0012581:160344-160363 Msa1352290:CDS 35.0%
!! AAGAATGGTTTGGTTGAGAA+TGG + tig0012581:160372-160391 Msa1352290:CDS 35.0%
! ATGGGAAGTTTGATGATAAG+AGG + tig0012581:160427-160446 Msa1352290:CDS 35.0%
! ATGGTAAATTTGATGACAGG+AGG + tig0012581:160529-160548 Msa1352290:CDS 35.0%
! TGATGATGAAATAGAGGATG+AGG + tig0012581:160614-160633 Msa1352290:CDS 35.0%
TTCTTTATGTTATCCCACCT+TGG - tig0012581:160660-160679 None:intergenic 35.0%
CATAAAGAACAGGTTTGAAG+GGG + tig0012581:160671-160690 Msa1352290:CDS 35.0%
AAAAACCGGAATTTCGAAGA+TGG + tig0012581:160718-160737 Msa1352290:CDS 35.0%
AAAACCGGAATTTCGAAGAT+GGG + tig0012581:160719-160738 Msa1352290:CDS 35.0%
ATGGGATAGGAATGAGAATT+GGG + tig0012581:160737-160756 Msa1352290:CDS 35.0%
ATTCCTTCACCAACAATCTT+AGG - tig0012581:160801-160820 None:intergenic 35.0%
! TGTTGGTGAAGGAATATATG+GGG + tig0012581:160806-160825 Msa1352290:CDS 35.0%
TATGCATTGTATGTGCAACA+AGG + tig0012581:160873-160892 Msa1352290:CDS 35.0%
ATGCATTGTATGTGCAACAA+GGG + tig0012581:160874-160893 Msa1352290:CDS 35.0%
TAGCAACAATAGGAAGAAGA+AGG + tig0012581:160908-160927 Msa1352290:CDS 35.0%
AGGAAGAAGAAGGATAAGAA+AGG + tig0012581:160918-160937 Msa1352290:CDS 35.0%
GGAAGAAGAAGGATAAGAAA+GGG + tig0012581:160919-160938 Msa1352290:CDS 35.0%
! TCTAAAACCAAACCTTGATG+AGG - tig0012581:161035-161054 None:intergenic 35.0%
!! ATTGGAACCTGTTTCTATTG+AGG + tig0012581:161088-161107 Msa1352290:CDS 35.0%
TTTCCTTCCTCAATAGAAAC+AGG - tig0012581:161098-161117 None:intergenic 35.0%
! TGTTTCTATTGAGGAAGGAA+AGG + tig0012581:161097-161116 Msa1352290:CDS 35.0%
GTTTCTATTGAGGAAGGAAA+GGG + tig0012581:161098-161117 Msa1352290:CDS 35.0%
AGAATTTGGGGGCAATTATT+AGG + tig0012581:161159-161178 Msa1352290:CDS 35.0%
TCATTGAATGAGATTGAACC+TGG + tig0012581:161383-161402 Msa1352290:CDS 35.0%
ACTCAGTTGGTTAAAATTGC+TGG + tig0012581:161473-161492 Msa1352290:CDS 35.0%
AGTACCAGTGATGAATTAGA+AGG + tig0012581:161515-161534 Msa1352290:CDS 35.0%
TTCACCTTCTAATTCATCAC+TGG - tig0012581:161522-161541 None:intergenic 35.0%
! GAATTAGAAGGTGAAAGTAC+CGG + tig0012581:161527-161546 Msa1352290:CDS 35.0%
ATGAAAGGAACTCTTTACCA+GGG - tig0012581:161568-161587 None:intergenic 35.0%
AATGAAAGGAACTCTTTACC+AGG - tig0012581:161569-161588 None:intergenic 35.0%
TTTCCACAGCCAAAAATGAA+AGG - tig0012581:161583-161602 None:intergenic 35.0%
!!! TGCTTGGGTTTTGGAGATAT+TGG - tig0012581:159947-159966 None:intergenic 40.0%
! GGAGAGTGAATTGAAGCATT+TGG - tig0012581:160001-160020 None:intergenic 40.0%
GAGAGGAAAGTGGTGAAAAT+TGG - tig0012581:160035-160054 None:intergenic 40.0%
TGTAGCATCAACCCATATCT+GGG - tig0012581:160081-160100 None:intergenic 40.0%
TTGTAGCATCAACCCATATC+TGG - tig0012581:160082-160101 None:intergenic 40.0%
TCAAGAGGATTCAGCTAAGA+AGG + tig0012581:160224-160243 Msa1352290:CDS 40.0%
CAAGAGGATTCAGCTAAGAA+GGG + tig0012581:160225-160244 Msa1352290:CDS 40.0%
AAGAGGATTCAGCTAAGAAG+GGG + tig0012581:160226-160245 Msa1352290:CDS 40.0%
ATCAACTGATTGTTCCCAAG+AGG - tig0012581:160262-160281 None:intergenic 40.0%
CTTGGGAACAATCAGTTGAT+AGG + tig0012581:160262-160281 Msa1352290:CDS 40.0%
CAGAATTTAAGCCGAGATCA+CGG + tig0012581:160304-160323 Msa1352290:CDS 40.0%
AGAATTTAAGCCGAGATCAC+GGG + tig0012581:160305-160324 Msa1352290:CDS 40.0%
! GAATCAGCCTTTTCTGCAAA+AGG + tig0012581:160327-160346 Msa1352290:CDS 40.0%
! AACACCACCTTTTGCAGAAA+AGG - tig0012581:160337-160356 None:intergenic 40.0%
! CAAAAGGTGGTGTTTCTGAT+AGG + tig0012581:160343-160362 Msa1352290:CDS 40.0%
TCTGATAGGGAAAGGAAGAA+TGG + tig0012581:160357-160376 Msa1352290:CDS 40.0%
TAGGGAAAGGAAGAATGGTT+TGG + tig0012581:160362-160381 Msa1352290:CDS 40.0%
! AGAGAGCATAGAAACTATCG+CGG + tig0012581:160396-160415 Msa1352290:CDS 40.0%
AACTATCGCGGTAGTAGATA+TGG + tig0012581:160408-160427 Msa1352290:CDS 40.0%
ACTATCGCGGTAGTAGATAT+GGG + tig0012581:160409-160428 Msa1352290:CDS 40.0%
AACACGCGCTTTGACAAATA+TGG + tig0012581:160510-160529 Msa1352290:CDS 40.0%
AACACACGCTCTGATAGATA+TGG + tig0012581:160561-160580 Msa1352290:CDS 40.0%
TGAAATAGAGGATGAGGTAG+AGG + tig0012581:160620-160639 Msa1352290:CDS 40.0%
GGTGGGATAACATAAAGAAC+AGG + tig0012581:160661-160680 Msa1352290:CDS 40.0%
CTATCCCATCTTCGAAATTC+CGG - tig0012581:160726-160745 None:intergenic 40.0%
GATGGGATAGGAATGAGAAT+TGG + tig0012581:160736-160755 Msa1352290:CDS 40.0%
TGGGATAGGAATGAGAATTG+GGG + tig0012581:160738-160757 Msa1352290:CDS 40.0%
AGAATTGGGGTAGAAAGACA+TGG + tig0012581:160751-160770 Msa1352290:CDS 40.0%
TCTACTGTGCCTAAGATTGT+TGG + tig0012581:160789-160808 Msa1352290:CDS 40.0%
TGCATTATCAGCTGGAAGAA+GGG + tig0012581:160845-160864 Msa1352290:CDS 40.0%
ATTGTATGTGCAACAAGGGT+TGG + tig0012581:160878-160897 Msa1352290:CDS 40.0%
AGGATAAGAAAGGGTTTGAG+AGG + tig0012581:160928-160947 Msa1352290:CDS 40.0%
GGATAAGAAAGGGTTTGAGA+GGG + tig0012581:160929-160948 Msa1352290:CDS 40.0%
!! GTTTGAGAGGGTTCTAAAGA+TGG + tig0012581:160941-160960 Msa1352290:CDS 40.0%
AAACCAAACCTTGATGAGGT+CGG - tig0012581:161031-161050 None:intergenic 40.0%
AGATGCTTCACCACTTGAAA+TGG + tig0012581:161052-161071 Msa1352290:CDS 40.0%
!! GAACCTGTTTCTATTGAGGA+AGG + tig0012581:161092-161111 Msa1352290:CDS 40.0%
GTGACTGATCCTCAGAATTT+GGG + tig0012581:161146-161165 Msa1352290:CDS 40.0%
TGACTGATCCTCAGAATTTG+GGG + tig0012581:161147-161166 Msa1352290:CDS 40.0%
ATAATTGCCCCCAAATTCTG+AGG - tig0012581:161158-161177 None:intergenic 40.0%
AAGAATTCAGCTCCATTGAG+TGG + tig0012581:161224-161243 Msa1352290:CDS 40.0%
TTGCTAACAACACCACTCAA+TGG - tig0012581:161239-161258 None:intergenic 40.0%
TTAGTGTCTTCAGCCGAAAA+TGG + tig0012581:161320-161339 Msa1352290:CDS 40.0%
! AAGAACTCGCCAACCATTTT+CGG - tig0012581:161336-161355 None:intergenic 40.0%
!! TCCACCGACTATTCTTGTTT+TGG + tig0012581:161406-161425 Msa1352290:CDS 40.0%
!!! CCACCGACTATTCTTGTTTT+GGG + tig0012581:161407-161426 Msa1352290:CDS 40.0%
CTGCCCAAAACAAGAATAGT+CGG - tig0012581:161413-161432 None:intergenic 40.0%
!!! TATTCTTGTTTTGGGCAGTG+AGG + tig0012581:161415-161434 Msa1352290:CDS 40.0%
!!! ATTCTTGTTTTGGGCAGTGA+GGG + tig0012581:161416-161435 Msa1352290:CDS 40.0%
TCACTGGTACTTAAGTCTGA+AGG - tig0012581:161506-161525 None:intergenic 40.0%
!!! GTTCCTTTCATTTTTGGCTG+TGG + tig0012581:161577-161596 Msa1352290:CDS 40.0%
AAGGTCTGTAGATTCTTTGC+CGG + tig0012581:161655-161674 Msa1352290:CDS 40.0%
!!! TGCTTGGGTTTTGGAGATAT+TGG - tig0012581:159947-159966 None:intergenic 40.0%
! GGAGAGTGAATTGAAGCATT+TGG - tig0012581:160001-160020 None:intergenic 40.0%
GAGAGGAAAGTGGTGAAAAT+TGG - tig0012581:160035-160054 None:intergenic 40.0%
TGTAGCATCAACCCATATCT+GGG - tig0012581:160081-160100 None:intergenic 40.0%
TTGTAGCATCAACCCATATC+TGG - tig0012581:160082-160101 None:intergenic 40.0%
TCAAGAGGATTCAGCTAAGA+AGG + tig0012581:160224-160243 Msa1352290:CDS 40.0%
CAAGAGGATTCAGCTAAGAA+GGG + tig0012581:160225-160244 Msa1352290:CDS 40.0%
AAGAGGATTCAGCTAAGAAG+GGG + tig0012581:160226-160245 Msa1352290:CDS 40.0%
ATCAACTGATTGTTCCCAAG+AGG - tig0012581:160262-160281 None:intergenic 40.0%
CTTGGGAACAATCAGTTGAT+AGG + tig0012581:160262-160281 Msa1352290:CDS 40.0%
CAGAATTTAAGCCGAGATCA+CGG + tig0012581:160304-160323 Msa1352290:CDS 40.0%
AGAATTTAAGCCGAGATCAC+GGG + tig0012581:160305-160324 Msa1352290:CDS 40.0%
! GAATCAGCCTTTTCTGCAAA+AGG + tig0012581:160327-160346 Msa1352290:CDS 40.0%
! AACACCACCTTTTGCAGAAA+AGG - tig0012581:160337-160356 None:intergenic 40.0%
! CAAAAGGTGGTGTTTCTGAT+AGG + tig0012581:160343-160362 Msa1352290:CDS 40.0%
TCTGATAGGGAAAGGAAGAA+TGG + tig0012581:160357-160376 Msa1352290:CDS 40.0%
TAGGGAAAGGAAGAATGGTT+TGG + tig0012581:160362-160381 Msa1352290:CDS 40.0%
! AGAGAGCATAGAAACTATCG+CGG + tig0012581:160396-160415 Msa1352290:CDS 40.0%
AACTATCGCGGTAGTAGATA+TGG + tig0012581:160408-160427 Msa1352290:CDS 40.0%
ACTATCGCGGTAGTAGATAT+GGG + tig0012581:160409-160428 Msa1352290:CDS 40.0%
AACACGCGCTTTGACAAATA+TGG + tig0012581:160510-160529 Msa1352290:CDS 40.0%
AACACACGCTCTGATAGATA+TGG + tig0012581:160561-160580 Msa1352290:CDS 40.0%
TGAAATAGAGGATGAGGTAG+AGG + tig0012581:160620-160639 Msa1352290:CDS 40.0%
GGTGGGATAACATAAAGAAC+AGG + tig0012581:160661-160680 Msa1352290:CDS 40.0%
CTATCCCATCTTCGAAATTC+CGG - tig0012581:160726-160745 None:intergenic 40.0%
GATGGGATAGGAATGAGAAT+TGG + tig0012581:160736-160755 Msa1352290:CDS 40.0%
TGGGATAGGAATGAGAATTG+GGG + tig0012581:160738-160757 Msa1352290:CDS 40.0%
AGAATTGGGGTAGAAAGACA+TGG + tig0012581:160751-160770 Msa1352290:CDS 40.0%
TCTACTGTGCCTAAGATTGT+TGG + tig0012581:160789-160808 Msa1352290:CDS 40.0%
TGCATTATCAGCTGGAAGAA+GGG + tig0012581:160845-160864 Msa1352290:CDS 40.0%
ATTGTATGTGCAACAAGGGT+TGG + tig0012581:160878-160897 Msa1352290:CDS 40.0%
AGGATAAGAAAGGGTTTGAG+AGG + tig0012581:160928-160947 Msa1352290:CDS 40.0%
GGATAAGAAAGGGTTTGAGA+GGG + tig0012581:160929-160948 Msa1352290:CDS 40.0%
!! GTTTGAGAGGGTTCTAAAGA+TGG + tig0012581:160941-160960 Msa1352290:CDS 40.0%
AAACCAAACCTTGATGAGGT+CGG - tig0012581:161031-161050 None:intergenic 40.0%
AGATGCTTCACCACTTGAAA+TGG + tig0012581:161052-161071 Msa1352290:CDS 40.0%
!! GAACCTGTTTCTATTGAGGA+AGG + tig0012581:161092-161111 Msa1352290:CDS 40.0%
GTGACTGATCCTCAGAATTT+GGG + tig0012581:161146-161165 Msa1352290:CDS 40.0%
TGACTGATCCTCAGAATTTG+GGG + tig0012581:161147-161166 Msa1352290:CDS 40.0%
ATAATTGCCCCCAAATTCTG+AGG - tig0012581:161158-161177 None:intergenic 40.0%
AAGAATTCAGCTCCATTGAG+TGG + tig0012581:161224-161243 Msa1352290:CDS 40.0%
TTGCTAACAACACCACTCAA+TGG - tig0012581:161239-161258 None:intergenic 40.0%
TTAGTGTCTTCAGCCGAAAA+TGG + tig0012581:161320-161339 Msa1352290:CDS 40.0%
! AAGAACTCGCCAACCATTTT+CGG - tig0012581:161336-161355 None:intergenic 40.0%
!! TCCACCGACTATTCTTGTTT+TGG + tig0012581:161406-161425 Msa1352290:CDS 40.0%
!!! CCACCGACTATTCTTGTTTT+GGG + tig0012581:161407-161426 Msa1352290:CDS 40.0%
CTGCCCAAAACAAGAATAGT+CGG - tig0012581:161413-161432 None:intergenic 40.0%
!!! TATTCTTGTTTTGGGCAGTG+AGG + tig0012581:161415-161434 Msa1352290:CDS 40.0%
!!! ATTCTTGTTTTGGGCAGTGA+GGG + tig0012581:161416-161435 Msa1352290:CDS 40.0%
TCACTGGTACTTAAGTCTGA+AGG - tig0012581:161506-161525 None:intergenic 40.0%
!!! GTTCCTTTCATTTTTGGCTG+TGG + tig0012581:161577-161596 Msa1352290:CDS 40.0%
AAGGTCTGTAGATTCTTTGC+CGG + tig0012581:161655-161674 Msa1352290:CDS 40.0%
! GAGTGGAAATGCTTGGGTTT+TGG - tig0012581:159956-159975 None:intergenic 45.0%
GGATACGAGTGGAAATGCTT+GGG - tig0012581:159962-159981 None:intergenic 45.0%
TGGATACGAGTGGAAATGCT+TGG - tig0012581:159963-159982 None:intergenic 45.0%
GTAGCATCAACCCATATCTG+GGG - tig0012581:160080-160099 None:intergenic 45.0%
!! TTGCTTTTCGGCACTTCTAG+CGG - tig0012581:160124-160143 None:intergenic 45.0%
! TCAGCCTTTTCTGCAAAAGG+TGG + tig0012581:160330-160349 Msa1352290:CDS 45.0%
! GTGGTGTTTCTGATAGGGAA+AGG + tig0012581:160349-160368 Msa1352290:CDS 45.0%
AACGCACTCTTTGACAGGTA+TGG + tig0012581:160459-160478 Msa1352290:CDS 45.0%
ACGCACTCTTTGACAGGTAT+GGG + tig0012581:160460-160479 Msa1352290:CDS 45.0%
AATAGAGGATGAGGTAGAGG+AGG + tig0012581:160623-160642 Msa1352290:CDS 45.0%
ATAGAGGATGAGGTAGAGGA+GGG + tig0012581:160624-160643 Msa1352290:CDS 45.0%
AAAGAACAGGTTTGAAGGGG+TGG + tig0012581:160674-160693 Msa1352290:CDS 45.0%
!! CAGAGGTGGATTGGAAAAAC+CGG + tig0012581:160704-160723 Msa1352290:CDS 45.0%
CGGAATTTCGAAGATGGGAT+AGG + tig0012581:160724-160743 Msa1352290:CDS 45.0%
! GTGCCTAAGATTGTTGGTGA+AGG + tig0012581:160795-160814 Msa1352290:CDS 45.0%
GGTGAAGGAATATATGGGGT+TGG + tig0012581:160810-160829 Msa1352290:CDS 45.0%
!! AGGAATATATGGGGTTGGTC+CGG + tig0012581:160815-160834 Msa1352290:CDS 45.0%
! GCTGATAATGCAGCCAAAAC+CGG - tig0012581:160837-160856 None:intergenic 45.0%
!!! GTTTTGGCTGCATTATCAGC+TGG + tig0012581:160837-160856 Msa1352290:CDS 45.0%
CTGCATTATCAGCTGGAAGA+AGG + tig0012581:160844-160863 Msa1352290:CDS 45.0%
ACCTTGATGAGGTCGGTTAT+CGG - tig0012581:161024-161043 None:intergenic 45.0%
TAACCGACCTCATCAAGGTT+TGG + tig0012581:161025-161044 Msa1352290:CDS 45.0%
AGGAAGGAAAGGGTTCTCTT+TGG + tig0012581:161108-161127 Msa1352290:CDS 45.0%
GGAAGGAAAGGGTTCTCTTT+GGG + tig0012581:161109-161128 Msa1352290:CDS 45.0%
!! TCTTTGGGTAGCTTTGGATG+AGG + tig0012581:161124-161143 Msa1352290:CDS 45.0%
GGTGACTGATCCTCAGAATT+TGG + tig0012581:161145-161164 Msa1352290:CDS 45.0%
GACTGATCCTCAGAATTTGG+GGG + tig0012581:161148-161167 Msa1352290:CDS 45.0%
GTTGTTAGCAAAGCAAGTGC+AGG + tig0012581:161248-161267 Msa1352290:CDS 45.0%
TGCAGGCTCACTTGAATTGA+TGG + tig0012581:161265-161284 Msa1352290:CDS 45.0%
TGTCTTCAGCCGAAAATGGT+TGG + tig0012581:161324-161343 Msa1352290:CDS 45.0%
GAAAATGGTTGGCGAGTTCT+TGG + tig0012581:161335-161354 Msa1352290:CDS 45.0%
CCCAAAACAAGAATAGTCGG+TGG - tig0012581:161410-161429 None:intergenic 45.0%
GTACATGATCTCTCCACCAA+AGG - tig0012581:161455-161474 None:intergenic 45.0%
GGAGAGATCATGTACTCAGT+TGG + tig0012581:161460-161479 Msa1352290:CDS 45.0%
AGGGCTCTCGCAATTTAAAC+CGG - tig0012581:161549-161568 None:intergenic 45.0%
GAAATCTGTCTATTCGCGTC+CGG - tig0012581:161677-161696 None:intergenic 45.0%
! GAGTGGAAATGCTTGGGTTT+TGG - tig0012581:159956-159975 None:intergenic 45.0%
GGATACGAGTGGAAATGCTT+GGG - tig0012581:159962-159981 None:intergenic 45.0%
TGGATACGAGTGGAAATGCT+TGG - tig0012581:159963-159982 None:intergenic 45.0%
GTAGCATCAACCCATATCTG+GGG - tig0012581:160080-160099 None:intergenic 45.0%
!! TTGCTTTTCGGCACTTCTAG+CGG - tig0012581:160124-160143 None:intergenic 45.0%
! TCAGCCTTTTCTGCAAAAGG+TGG + tig0012581:160330-160349 Msa1352290:CDS 45.0%
! GTGGTGTTTCTGATAGGGAA+AGG + tig0012581:160349-160368 Msa1352290:CDS 45.0%
AACGCACTCTTTGACAGGTA+TGG + tig0012581:160459-160478 Msa1352290:CDS 45.0%
ACGCACTCTTTGACAGGTAT+GGG + tig0012581:160460-160479 Msa1352290:CDS 45.0%
AATAGAGGATGAGGTAGAGG+AGG + tig0012581:160623-160642 Msa1352290:CDS 45.0%
ATAGAGGATGAGGTAGAGGA+GGG + tig0012581:160624-160643 Msa1352290:CDS 45.0%
AAAGAACAGGTTTGAAGGGG+TGG + tig0012581:160674-160693 Msa1352290:CDS 45.0%
!! CAGAGGTGGATTGGAAAAAC+CGG + tig0012581:160704-160723 Msa1352290:CDS 45.0%
CGGAATTTCGAAGATGGGAT+AGG + tig0012581:160724-160743 Msa1352290:CDS 45.0%
! GTGCCTAAGATTGTTGGTGA+AGG + tig0012581:160795-160814 Msa1352290:CDS 45.0%
GGTGAAGGAATATATGGGGT+TGG + tig0012581:160810-160829 Msa1352290:CDS 45.0%
!! AGGAATATATGGGGTTGGTC+CGG + tig0012581:160815-160834 Msa1352290:CDS 45.0%
! GCTGATAATGCAGCCAAAAC+CGG - tig0012581:160837-160856 None:intergenic 45.0%
!!! GTTTTGGCTGCATTATCAGC+TGG + tig0012581:160837-160856 Msa1352290:CDS 45.0%
CTGCATTATCAGCTGGAAGA+AGG + tig0012581:160844-160863 Msa1352290:CDS 45.0%
ACCTTGATGAGGTCGGTTAT+CGG - tig0012581:161024-161043 None:intergenic 45.0%
TAACCGACCTCATCAAGGTT+TGG + tig0012581:161025-161044 Msa1352290:CDS 45.0%
AGGAAGGAAAGGGTTCTCTT+TGG + tig0012581:161108-161127 Msa1352290:CDS 45.0%
GGAAGGAAAGGGTTCTCTTT+GGG + tig0012581:161109-161128 Msa1352290:CDS 45.0%
!! TCTTTGGGTAGCTTTGGATG+AGG + tig0012581:161124-161143 Msa1352290:CDS 45.0%
GGTGACTGATCCTCAGAATT+TGG + tig0012581:161145-161164 Msa1352290:CDS 45.0%
GACTGATCCTCAGAATTTGG+GGG + tig0012581:161148-161167 Msa1352290:CDS 45.0%
GTTGTTAGCAAAGCAAGTGC+AGG + tig0012581:161248-161267 Msa1352290:CDS 45.0%
TGCAGGCTCACTTGAATTGA+TGG + tig0012581:161265-161284 Msa1352290:CDS 45.0%
TGTCTTCAGCCGAAAATGGT+TGG + tig0012581:161324-161343 Msa1352290:CDS 45.0%
GAAAATGGTTGGCGAGTTCT+TGG + tig0012581:161335-161354 Msa1352290:CDS 45.0%
CCCAAAACAAGAATAGTCGG+TGG - tig0012581:161410-161429 None:intergenic 45.0%
GTACATGATCTCTCCACCAA+AGG - tig0012581:161455-161474 None:intergenic 45.0%
GGAGAGATCATGTACTCAGT+TGG + tig0012581:161460-161479 Msa1352290:CDS 45.0%
AGGGCTCTCGCAATTTAAAC+CGG - tig0012581:161549-161568 None:intergenic 45.0%
GAAATCTGTCTATTCGCGTC+CGG - tig0012581:161677-161696 None:intergenic 45.0%
GTGCCGAAAAGCAACTTCCT+TGG + tig0012581:160130-160149 Msa1352290:CDS 50.0%
!! AGGGGAGTGTTAAGTCCTCT+TGG + tig0012581:160244-160263 Msa1352290:CDS 50.0%
!! GGGGAGTGTTAAGTCCTCTT+GGG + tig0012581:160245-160264 Msa1352290:CDS 50.0%
! AAGGCTGATTCCCGTGATCT+CGG - tig0012581:160318-160337 None:intergenic 50.0%
CTAGCAACGCACTCTTTGAC+AGG + tig0012581:160454-160473 Msa1352290:CDS 50.0%
!! AGGAGGGTGTTGATGATCCA+AGG + tig0012581:160640-160659 Msa1352290:CDS 50.0%
!! AGGGTGTTGATGATCCAAGG+TGG + tig0012581:160643-160662 Msa1352290:CDS 50.0%
!! GGGTGTTGATGATCCAAGGT+GGG + tig0012581:160644-160663 Msa1352290:CDS 50.0%
AACAGGTTTGAAGGGGTGGT+TGG + tig0012581:160678-160697 Msa1352290:CDS 50.0%
GGGTAGAAAGACATGGCAAG+AGG + tig0012581:160758-160777 Msa1352290:CDS 50.0%
!!! ATATGGGGTTGGTCCGGTTT+TGG + tig0012581:160821-160840 Msa1352290:CDS 50.0%
ACCGATAACCGACCTCATCA+AGG + tig0012581:161020-161039 Msa1352290:CDS 50.0%
GGGTTCTCTTTGGGTAGCTT+TGG + tig0012581:161118-161137 Msa1352290:CDS 50.0%
AATGGTTGGCGAGTTCTTGG+TGG + tig0012581:161338-161357 Msa1352290:CDS 50.0%
ACAAGAATAGTCGGTGGACC+AGG - tig0012581:161404-161423 None:intergenic 50.0%
GGTTTAAATTGCGAGAGCCC+TGG + tig0012581:161548-161567 Msa1352290:CDS 50.0%
GTGCCGAAAAGCAACTTCCT+TGG + tig0012581:160130-160149 Msa1352290:CDS 50.0%
!! AGGGGAGTGTTAAGTCCTCT+TGG + tig0012581:160244-160263 Msa1352290:CDS 50.0%
!! GGGGAGTGTTAAGTCCTCTT+GGG + tig0012581:160245-160264 Msa1352290:CDS 50.0%
! AAGGCTGATTCCCGTGATCT+CGG - tig0012581:160318-160337 None:intergenic 50.0%
CTAGCAACGCACTCTTTGAC+AGG + tig0012581:160454-160473 Msa1352290:CDS 50.0%
!! AGGAGGGTGTTGATGATCCA+AGG + tig0012581:160640-160659 Msa1352290:CDS 50.0%
!! AGGGTGTTGATGATCCAAGG+TGG + tig0012581:160643-160662 Msa1352290:CDS 50.0%
!! GGGTGTTGATGATCCAAGGT+GGG + tig0012581:160644-160663 Msa1352290:CDS 50.0%
AACAGGTTTGAAGGGGTGGT+TGG + tig0012581:160678-160697 Msa1352290:CDS 50.0%
GGGTAGAAAGACATGGCAAG+AGG + tig0012581:160758-160777 Msa1352290:CDS 50.0%
!!! ATATGGGGTTGGTCCGGTTT+TGG + tig0012581:160821-160840 Msa1352290:CDS 50.0%
ACCGATAACCGACCTCATCA+AGG + tig0012581:161020-161039 Msa1352290:CDS 50.0%
GGGTTCTCTTTGGGTAGCTT+TGG + tig0012581:161118-161137 Msa1352290:CDS 50.0%
AATGGTTGGCGAGTTCTTGG+TGG + tig0012581:161338-161357 Msa1352290:CDS 50.0%
ACAAGAATAGTCGGTGGACC+AGG - tig0012581:161404-161423 None:intergenic 50.0%
GGTTTAAATTGCGAGAGCCC+TGG + tig0012581:161548-161567 Msa1352290:CDS 50.0%
AGGTTTGAAGGGGTGGTTGG+AGG + tig0012581:160681-160700 Msa1352290:CDS 55.0%
!! CACTGGTTTGAGGCCTTTGG+TGG + tig0012581:161439-161458 Msa1352290:CDS 55.0%
AGGTTTGAAGGGGTGGTTGG+AGG + tig0012581:160681-160700 Msa1352290:CDS 55.0%
!! CACTGGTTTGAGGCCTTTGG+TGG + tig0012581:161439-161458 Msa1352290:CDS 55.0%
GGTTGGAGGCAGAGGTGGAT+TGG + tig0012581:160695-160714 Msa1352290:CDS 60.0%
!! GTTTTGGGCAGTGAGGGCAC+TGG + tig0012581:161422-161441 Msa1352290:CDS 60.0%
!! GCAGTGAGGGCACTGGTTTG+AGG + tig0012581:161429-161448 Msa1352290:CDS 60.0%
!! GGGCACTGGTTTGAGGCCTT+TGG + tig0012581:161436-161455 Msa1352290:CDS 60.0%
GGTTGGAGGCAGAGGTGGAT+TGG + tig0012581:160695-160714 Msa1352290:CDS 60.0%
!! GTTTTGGGCAGTGAGGGCAC+TGG + tig0012581:161422-161441 Msa1352290:CDS 60.0%
!! GCAGTGAGGGCACTGGTTTG+AGG + tig0012581:161429-161448 Msa1352290:CDS 60.0%
!! GGGCACTGGTTTGAGGCCTT+TGG + tig0012581:161436-161455 Msa1352290:CDS 60.0%
GAAGGGGTGGTTGGAGGCAG+AGG + tig0012581:160687-160706 Msa1352290:CDS 65.0%
GAAGGGGTGGTTGGAGGCAG+AGG + tig0012581:160687-160706 Msa1352290:CDS 65.0%
GGGGTGGTTGGAGGCAGAGG+TGG + tig0012581:160690-160709 Msa1352290:CDS 70.0%
GGGGTGGTTGGAGGCAGAGG+TGG + tig0012581:160690-160709 Msa1352290:CDS 70.0%
Chromosome Type Strat End Strand Name
tig0012581 gene 159937 161703 159937 ID=Msa1352290;Name=Msa1352290
tig0012581 mRNA 159937 161703 159937 ID=Msa1352290-mRNA-1;Parent=Msa1352290;Name=Msa1352290-mRNA-1;_AED=0.00;_eAED=0.02;_QI=0|-1|0|1|-1|1|1|0|588
tig0012581 exon 159937 161703 159937 ID=Msa1352290-mRNA-1:exon:8061;Parent=Msa1352290-mRNA-1
tig0012581 CDS 159937 161703 159937 ID=Msa1352290-mRNA-1:cds;Parent=Msa1352290-mRNA-1
Gene Sequence

>Msa1352290

ATGTATACCAATATCTCCAAAACCCAAGCATTTCCACTCGTATCCAAAATATCTTCGCAACCCAAATGCTTCAATTCACTCTCCTCTTTAAAAATCCAATTTTCACCACTTTCCTCTCATAAAAAATCCATCTTTACAAACCCCAGATATGGGTTGATGCTACAAATTGCTAGAAAGTACTGTGCCGCTAGAAGTGCCGAAAAGCAACTTCCTTGGTTAGAAACAAATGAAGTTAAGGAAGATAAAATGGTTGAGAAAGCAAAAAGGAACAATGTTAGAAGCTCTATTCAAGAGGATTCAGCTAAGAAGGGGAGTGTTAAGTCCTCTTGGGAACAATCAGTTGATAGGTTAGAGATACCAACAGTTTCAGAATTTAAGCCGAGATCACGGGAATCAGCCTTTTCTGCAAAAGGTGGTGTTTCTGATAGGGAAAGGAAGAATGGTTTGGTTGAGAATGGTAGAGAGCATAGAAACTATCGCGGTAGTAGATATGGGAAGTTTGATGATAAGAGGAGTGCTAGCAACGCACTCTTTGACAGGTATGGGAAATTTGATGATAAGAGGAGCACTAGCAACACGCGCTTTGACAAATATGGTAAATTTGATGACAGGAGGAGCGCTAGCAACACACGCTCTGATAGATATGGTAAAGTTGATGATAATGTTGAGGAAAGAGTTGATGATGAAATAGAGGATGAGGTAGAGGAGGGTGTTGATGATCCAAGGTGGGATAACATAAAGAACAGGTTTGAAGGGGTGGTTGGAGGCAGAGGTGGATTGGAAAAACCGGAATTTCGAAGATGGGATAGGAATGAGAATTGGGGTAGAAAGACATGGCAAGAGGCAACTGAATCTACTGTGCCTAAGATTGTTGGTGAAGGAATATATGGGGTTGGTCCGGTTTTGGCTGCATTATCAGCTGGAAGAAGGGAATTCTATGCATTGTATGTGCAACAAGGGTTGGATTTAAGTAGCAACAATAGGAAGAAGAAGGATAAGAAAGGGTTTGAGAGGGTTCTAAAGATGGCTGAAAAGCTTAATTTAAGTATAAAAGAAGAATCAAAGCATGATTTGAATATGGTAACCGATAACCGACCTCATCAAGGTTTGGTTTTAGATGCTTCACCACTTGAAATGGTGAAAATACATGAATTGGAACCTGTTTCTATTGAGGAAGGAAAGGGTTCTCTTTGGGTAGCTTTGGATGAGGTGACTGATCCTCAGAATTTGGGGGCAATTATTAGGTCTTCATATTTTTTTGGAGCTACTGGTATAGTTTTATGTGCAAAGAATTCAGCTCCATTGAGTGGTGTTGTTAGCAAAGCAAGTGCAGGCTCACTTGAATTGATGGAACTTAGATATTGCAAAAACATGATGCAATTCTTAGTGTCTTCAGCCGAAAATGGTTGGCGAGTTCTTGGTGGTTCTGTCTCCTCTAAAGCGATTTCATTGAATGAGATTGAACCTGGTCCACCGACTATTCTTGTTTTGGGCAGTGAGGGCACTGGTTTGAGGCCTTTGGTGGAGAGATCATGTACTCAGTTGGTTAAAATTGCTGGTAATATTCCTTCAGACTTAAGTACCAGTGATGAATTAGAAGGTGAAAGTACCGGTTTAAATTGCGAGAGCCCTGGTAAAGAGTTCCTTTCATTTTTGGCTGTGGAAAGCTTAAATGTTAGTGTAGCAACAGGTGTGCTTCTTCATCATTTAATTGGTAAAAGGTCTGTAGATTCTTTGCCGGACGCGAATAGACAGATTTCTGAGTGA

Protein sequence

>Msa1352290

MYTNISKTQAFPLVSKISSQPKCFNSLSSLKIQFSPLSSHKKSIFTNPRYGLMLQIARKYCAARSAEKQLPWLETNEVKEDKMVEKAKRNNVRSSIQEDSAKKGSVKSSWEQSVDRLEIPTVSEFKPRSRESAFSAKGGVSDRERKNGLVENGREHRNYRGSRYGKFDDKRSASNALFDRYGKFDDKRSTSNTRFDKYGKFDDRRSASNTRSDRYGKVDDNVEERVDDEIEDEVEEGVDDPRWDNIKNRFEGVVGGRGGLEKPEFRRWDRNENWGRKTWQEATESTVPKIVGEGIYGVGPVLAALSAGRREFYALYVQQGLDLSSNNRKKKDKKGFERVLKMAEKLNLSIKEESKHDLNMVTDNRPHQGLVLDASPLEMVKIHELEPVSIEEGKGSLWVALDEVTDPQNLGAIIRSSYFFGATGIVLCAKNSAPLSGVVSKASAGSLELMELRYCKNMMQFLVSSAENGWRVLGGSVSSKAISLNEIEPGPPTILVLGSEGTGLRPLVERSCTQLVKIAGNIPSDLSTSDELEGESTGLNCESPGKEFLSFLAVESLNVSVATGVLLHHLIGKRSVDSLPDANRQISE*