Alfalfa Gene Editing Database
Alfalfa Gene Editing Database
| Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa0966920 | XP_003620756.1 | 97.636 | 423 | 10 | 0 | 1 | 423 | 1 | 423 | 0.0 | 856 |
| Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|
| Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|
| Gene ID | Type | Classification |
|---|
| Gene ID | Type | Classification |
|---|
Co-expression Network
| Gene1 | Gene2 | correlation coefficient | p_value | FDR |
|---|---|---|---|---|
| Msa0705810 | Msa0966920 | -0.803264 | 3.788083e-49 | -8.615850e-47 |
| Msa0715510 | Msa0966920 | 0.831582 | 1.538530e-55 | -8.615850e-47 |
| Msa0748980 | Msa0966920 | -0.807592 | 4.687964e-50 | -8.615850e-47 |
| Msa0766860 | Msa0966920 | 0.825410 | 4.760283e-54 | -8.615850e-47 |
| Msa0771910 | Msa0966920 | 0.830091 | 3.568620e-55 | -8.615850e-47 |
| Msa0810080 | Msa0966920 | 0.817920 | 2.567256e-52 | -8.615850e-47 |
| Msa0825520 | Msa0966920 | -0.804358 | 2.244658e-49 | -8.615850e-47 |
| Msa0126130 | Msa0966920 | 0.810824 | 9.510580e-51 | -8.615850e-47 |
| Msa0131090 | Msa0966920 | -0.800617 | 1.324961e-48 | -8.615850e-47 |
| Msa0147680 | Msa0966920 | 0.805434 | 1.337687e-49 | -8.615850e-47 |
| Msa0185690 | Msa0966920 | 0.809592 | 1.753418e-50 | -8.615850e-47 |
| Msa0195140 | Msa0966920 | -0.817871 | 2.632913e-52 | -8.615850e-47 |
| Msa0240590 | Msa0966920 | -0.817215 | 3.701629e-52 | -8.615850e-47 |
| Msa0274950 | Msa0966920 | 0.818272 | 2.137939e-52 | -8.615850e-47 |
| Msa0279090 | Msa0966920 | -0.807321 | 5.351158e-50 | -8.615850e-47 |
| Msa0521940 | Msa0966920 | 0.802113 | 6.545245e-49 | -8.615850e-47 |
| Msa0565860 | Msa0966920 | -0.801103 | 1.054154e-48 | -8.615850e-47 |
| Msa0850600 | Msa0966920 | 0.840007 | 1.126749e-57 | -8.615850e-47 |
| Msa0864730 | Msa0966920 | -0.812112 | 4.994991e-51 | -8.615850e-47 |
| Msa0864750 | Msa0966920 | -0.810951 | 8.927502e-51 | -8.615850e-47 |
| Msa0901820 | Msa0966920 | 0.973241 | 4.264804e-136 | -8.615850e-47 |
| Msa0950470 | Msa0966920 | -0.818249 | 2.163623e-52 | -8.615850e-47 |
| Msa0950570 | Msa0966920 | -0.827664 | 1.381114e-54 | -8.615850e-47 |
| Msa0966830 | Msa0966920 | 0.880528 | 5.098211e-70 | -8.615850e-47 |
| Msa0966920 | Msa1001050 | 0.867721 | 1.110855e-65 | -8.615850e-47 |
| Msa0966920 | Msa1021560 | 0.805844 | 1.096867e-49 | -8.615850e-47 |
| Msa0966920 | Msa1078300 | 0.816984 | 4.172313e-52 | -8.615850e-47 |
| Msa0966920 | Msa1088740 | -0.814911 | 1.210211e-51 | -8.615850e-47 |
| Msa0966920 | Msa1148930 | 0.807065 | 6.064708e-50 | -8.615850e-47 |
| Msa0966920 | Msa1190350 | -0.830252 | 3.260625e-55 | -8.615850e-47 |
| Msa0966920 | Msa1243630 | -0.804738 | 1.870123e-49 | -8.615850e-47 |
| Msa0966920 | Msa1244220 | -0.803064 | 4.166982e-49 | -8.615850e-47 |
| Msa0966920 | Msa1384620 | -0.805613 | 1.226526e-49 | -8.615850e-47 |
| Msa0966920 | Msa1398490 | 0.801385 | 9.233119e-49 | -8.615850e-47 |
| Msa0966920 | Msa1417950 | 0.812870 | 3.410287e-51 | -8.615850e-47 |
| Msa0966920 | Msa1421540 | 0.804136 | 2.497042e-49 | -8.615850e-47 |
| Msa0966920 | Msa1438510 | 0.823338 | 1.462015e-53 | -8.615850e-47 |
| Msa0966920 | Msa1447900 | 0.816626 | 5.019484e-52 | -8.615850e-47 |
PPI
| Gene1 | Gene2 | Type |
|---|
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa0966920 | MtrunA17_Chr6g0487371 | 97.636 | 423 | 10 | 0 | 1 | 423 | 1 | 423 | 0.0 | 856 |
| Msa0966920 | MtrunA17_Chr3g0140721 | 51.724 | 464 | 168 | 11 | 1 | 420 | 1 | 452 | 1.17e-143 | 417 |
| Msa0966920 | MtrunA17_Chr5g0393941 | 42.377 | 446 | 194 | 13 | 1 | 414 | 64 | 478 | 5.67e-94 | 291 |
| Msa0966920 | MtrunA17_Chr8g0389691 | 69.841 | 189 | 45 | 3 | 237 | 419 | 1 | 183 | 1.19e-86 | 262 |
| Msa0966920 | MtrunA17_Chr8g0337321 | 36.117 | 443 | 219 | 12 | 1 | 412 | 1 | 410 | 2.86e-72 | 233 |
| Msa0966920 | MtrunA17_Chr8g0389701 | 56.250 | 144 | 59 | 1 | 64 | 207 | 26 | 165 | 6.30e-50 | 166 |
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa0966920 | AT4G29310.1 | 65.589 | 433 | 128 | 9 | 1 | 422 | 1 | 423 | 0.0 | 550 |
| Msa0966920 | AT4G29310.2 | 64.350 | 331 | 102 | 7 | 1 | 322 | 1 | 324 | 2.16e-145 | 417 |
| Msa0966920 | AT1G10020.1 | 49.254 | 469 | 175 | 12 | 1 | 417 | 1 | 458 | 1.95e-131 | 386 |
| Msa0966920 | AT3G19680.1 | 43.293 | 492 | 203 | 10 | 1 | 420 | 1 | 488 | 6.08e-108 | 327 |
| Msa0966920 | AT1G50040.1 | 41.901 | 463 | 208 | 10 | 1 | 414 | 1 | 451 | 2.27e-93 | 289 |
| Msa0966920 | AT5G17640.1 | 38.018 | 434 | 222 | 10 | 1 | 404 | 1 | 417 | 8.97e-83 | 261 |
Find 114 sgRNAs with CRISPR-Local
Find 249 sgRNAs with CRISPR-GE
CRISPR-Local
| sgRNA_sequence | on_target_score | Position | Region |
|---|---|---|---|
| TCAGCGGAGCTGGTGGTTTC+AGG | 0.223787 | 6_3:+95769773 | None:intergenic |
| TGTTGGTGATGGAAGGTTTA+GGG | 0.274468 | 6_3:+95769922 | None:intergenic |
| ATCCACAATGAATGTGAAAA+AGG | 0.295332 | 6_3:-95766182 | Msa0966920:CDS |
| TTGTTGGTGATGGAAGGTTT+AGG | 0.311492 | 6_3:+95769921 | None:intergenic |
| GTGGTTTGAGAAGGGAAATT+TGG | 0.319386 | 6_3:+95769830 | None:intergenic |
| AAGACATGAAAGGTATGTTT+TGG | 0.333797 | 6_3:+95770019 | None:intergenic |
| ATCCATTGTTCTTTGTTGTT+TGG | 0.340336 | 6_3:+95769982 | None:intergenic |
| CTCGGGTTCATTTCGTGGTT+CGG | 0.344710 | 6_3:-95769511 | Msa0966920:CDS |
| TGCTGCTATTGATCTTAGTA+TGG | 0.353674 | 6_3:-95765969 | Msa0966920:CDS |
| AGTATTATGGATTGTGTTCA+AGG | 0.354254 | 6_3:-95766123 | Msa0966920:CDS |
| TTTCGTGGTTCGGTCTGAAC+CGG | 0.364301 | 6_3:-95769501 | Msa0966920:CDS |
| TTGCAAACACTCCTAGTAGA+TGG | 0.374403 | 6_3:-95766516 | Msa0966920:CDS |
| CATTATAATCAATGCAGAAT+TGG | 0.384100 | 6_3:+95766155 | None:intergenic |
| AATGTTATGAAAGAGTATTA+TGG | 0.388839 | 6_3:-95766136 | Msa0966920:CDS |
| TTCATTGTGGATTCAGCTAT+AGG | 0.393565 | 6_3:+95766193 | None:intergenic |
| CTACTCACTGAGGCGCCGTT+TGG | 0.396234 | 6_3:+95766313 | None:intergenic |
| TTGGTTTATGTAATAAGATT+TGG | 0.398565 | 6_3:+95770038 | None:intergenic |
| TCATAGTGGATGGCTTGTGC+TGG | 0.409638 | 6_3:-95769573 | Msa0966920:CDS |
| CAAGGTTACCACCAGGTAAA+GGG | 0.410973 | 6_3:-95766105 | Msa0966920:CDS |
| CTGTGTTTGTCTGTGTATGC+TGG | 0.412676 | 6_3:-95769695 | Msa0966920:CDS |
| CATGGTATTGTTGTTGTTGA+AGG | 0.422188 | 6_3:+95769872 | None:intergenic |
| TGTGCACCAACTTGCACAAA+AGG | 0.427169 | 6_3:+95766037 | None:intergenic |
| CGAGCCGAATCCTTCTTTCC+CGG | 0.431922 | 6_3:+95769530 | None:intergenic |
| GTCTGTGTATGCTGGAAGCA+TGG | 0.433665 | 6_3:-95769687 | Msa0966920:CDS |
| ACCATTGAGGCTGCAGCAAC+CGG | 0.435726 | 6_3:+95766409 | None:intergenic |
| CACACCATTTGTCCCATCCC+CGG | 0.436841 | 6_3:-95766386 | Msa0966920:CDS |
| GTGGAAACCATCAGCGGAGC+TGG | 0.455014 | 6_3:+95769763 | None:intergenic |
| TTCGGCTCGGGTTCATTTCG+TGG | 0.456979 | 6_3:-95769516 | Msa0966920:CDS |
| AAGAGGTCATGTAGATGGCT+TGG | 0.464790 | 6_3:-95766254 | Msa0966920:CDS |
| ACACTCCTAGTAGATGGAAA+AGG | 0.466520 | 6_3:-95766510 | Msa0966920:CDS |
| CTCTGTCTGAGCCCGGGGAT+GGG | 0.471475 | 6_3:+95766374 | None:intergenic |
| AAAGAAGAAAGGGTTTGAAC+CGG | 0.474100 | 6_3:-95769549 | Msa0966920:CDS |
| CAGTTATGTTTCATAGTGGA+TGG | 0.475543 | 6_3:-95769583 | Msa0966920:CDS |
| CTTGATACTCTGTCTGAGCC+CGG | 0.475731 | 6_3:+95766367 | None:intergenic |
| TCAAGGTTACCACCAGGTAA+AGG | 0.476377 | 6_3:-95766106 | Msa0966920:CDS |
| AGGGTTTGAACCGGGAAAGA+AGG | 0.477281 | 6_3:-95769540 | Msa0966920:CDS |
| ACGGCGCCTCAGTGAGTAGC+TGG | 0.485041 | 6_3:-95766309 | Msa0966920:CDS |
| CACTCCTAGTAGATGGAAAA+GGG | 0.485668 | 6_3:-95766509 | Msa0966920:CDS |
| GTGATGAGTTCTAGTGTTGA+AGG | 0.486355 | 6_3:-95766079 | Msa0966920:CDS |
| ACCGGTTGCTGCAGCCTCAA+TGG | 0.487378 | 6_3:-95766410 | Msa0966920:CDS |
| ACACCATTTGTCCCATCCCC+GGG | 0.490416 | 6_3:-95766385 | Msa0966920:CDS |
| ACTCTGTCTGAGCCCGGGGA+TGG | 0.491390 | 6_3:+95766373 | None:intergenic |
| TTGATACTCTGTCTGAGCCC+GGG | 0.494151 | 6_3:+95766368 | None:intergenic |
| TCAACTGTTAGACGTACAAA+TGG | 0.494581 | 6_3:+95769953 | None:intergenic |
| AGAGGTCATGTAGATGGCTT+GGG | 0.495477 | 6_3:-95766253 | Msa0966920:CDS |
| AATAAGATTTGGTGTTGAAA+AGG | 0.496701 | 6_3:+95770049 | None:intergenic |
| GGAAGAAGTGTGGTTTGAGA+AGG | 0.497031 | 6_3:+95769821 | None:intergenic |
| CGAAGAATTAGCCATGCGCC+GGG | 0.497196 | 6_3:+95766337 | None:intergenic |
| AGAGAAAGAGGTCATGTAGA+TGG | 0.497449 | 6_3:-95766259 | Msa0966920:CDS |
| GCGTCACGGACGAGAAAGAA+AGG | 0.497933 | 6_3:-95766467 | Msa0966920:CDS |
| ATAACAGTTCACGATCTCTC+TGG | 0.506176 | 6_3:-95766436 | Msa0966920:CDS |
| TGAACCGGGAAAGAAGGATT+CGG | 0.506902 | 6_3:-95769534 | Msa0966920:CDS |
| GTAGTTTAAGAAAGAGGGTG+TGG | 0.512771 | 6_3:+95770086 | None:intergenic |
| TCACGATCTCTCTGGTTCAC+CGG | 0.513554 | 6_3:-95766428 | Msa0966920:CDS |
| GAGCCCGGGGATGGGACAAA+TGG | 0.513648 | 6_3:+95766382 | None:intergenic |
| AGGGAAATTTGGTATATGAA+TGG | 0.516982 | 6_3:+95769841 | None:intergenic |
| GTTTCGTAGTTTAAGAAAGA+GGG | 0.522168 | 6_3:+95770081 | None:intergenic |
| CTTGTGCTGGGAAAGAAGAA+AGG | 0.522313 | 6_3:-95769560 | Msa0966920:CDS |
| AAAACCACCGGACTACATTC+CGG | 0.522926 | 6_3:+95769446 | None:intergenic |
| AGTTTCGTAGTTTAAGAAAG+AGG | 0.522978 | 6_3:+95770080 | None:intergenic |
| TCAAGAGAATATTAGACAGC+CGG | 0.523927 | 6_3:-95769417 | Msa0966920:CDS |
| GAAGAAGTGTGGTTTGAGAA+GGG | 0.529695 | 6_3:+95769822 | None:intergenic |
| GGGAAAGAAGGATTCGGCTC+GGG | 0.533415 | 6_3:-95769528 | Msa0966920:CDS |
| AATGCACTCCAGCGTCTCAC+AGG | 0.544235 | 6_3:-95769731 | Msa0966920:CDS |
| CGTTCAGTTATGTTTCATAG+TGG | 0.545140 | 6_3:-95769587 | Msa0966920:CDS |
| ACAGACAAACACAGAGGGAT+AGG | 0.545665 | 6_3:+95769704 | None:intergenic |
| GATGAAGATGATGAAGAGAG+TGG | 0.546238 | 6_3:+95769800 | None:intergenic |
| TGGCTAATTCTTCGTCCAAA+CGG | 0.547768 | 6_3:-95766328 | Msa0966920:CDS |
| CAGTGAGTAGCTGGAAACCA+TGG | 0.547889 | 6_3:-95766300 | Msa0966920:CDS |
| TTAGAAGCATGGAGAGAAAG+AGG | 0.550587 | 6_3:-95766271 | Msa0966920:CDS |
| CTGATCGAAATTCTAGATCA+AGG | 0.551265 | 6_3:-95769373 | Msa0966920:intron |
| CATAGTGGATGGCTTGTGCT+GGG | 0.552598 | 6_3:-95769572 | Msa0966920:CDS |
| AGGTGAACCGGAATGTAGTC+CGG | 0.552686 | 6_3:-95769453 | Msa0966920:CDS |
| AGTGAGTAGCTGGAAACCAT+GGG | 0.554092 | 6_3:-95766299 | Msa0966920:CDS |
| TTCGGTCTGAACCGGATCCA+CGG | 0.555103 | 6_3:-95769493 | Msa0966920:CDS |
| CAAGATCAAACCCCGGCGCA+TGG | 0.560299 | 6_3:-95766348 | Msa0966920:CDS |
| TAGGTTTGCCTGTGAGACGC+TGG | 0.562906 | 6_3:+95769723 | None:intergenic |
| TGCACAACATGTTACATGTA+TGG | 0.563106 | 6_3:-95766020 | Msa0966920:CDS |
| TTGTGCTGGGAAAGAAGAAA+GGG | 0.565368 | 6_3:-95769559 | Msa0966920:CDS |
| ACGAAGAATTAGCCATGCGC+CGG | 0.565487 | 6_3:+95766336 | None:intergenic |
| CTCATCACAAACCCTTTACC+TGG | 0.570924 | 6_3:+95766094 | None:intergenic |
| GAAACCACCAGCTCCGCTGA+TGG | 0.570979 | 6_3:-95769770 | Msa0966920:CDS |
| CATGGGGACGTTTAGAAGCA+TGG | 0.571889 | 6_3:-95766282 | Msa0966920:CDS |
| TGTGAGACGCTGGAGTGCAT+TGG | 0.575230 | 6_3:+95769733 | None:intergenic |
| AAGAAGAAAGGGTTTGAACC+GGG | 0.580697 | 6_3:-95769548 | Msa0966920:CDS |
| GCTGGAGTGCATTGGAGTCG+AGG | 0.584687 | 6_3:+95769741 | None:intergenic |
| GAACTCGTAACCGAAAATAA+CGG | 0.585112 | 6_3:-95766220 | Msa0966920:CDS |
| GGAAGCATGGGTCGAACTTG+CGG | 0.588429 | 6_3:-95769674 | Msa0966920:CDS |
| AGTTCTAGTGTTGAAGGTGA+AGG | 0.591958 | 6_3:-95766073 | Msa0966920:CDS |
| TCTGTGTATGCTGGAAGCAT+GGG | 0.592421 | 6_3:-95769686 | Msa0966920:CDS |
| AACCAAACAACAAAGAACAA+TGG | 0.593579 | 6_3:-95769984 | Msa0966920:exon |
| TGAAGAGAGTGGAAGAAGTG+TGG | 0.595218 | 6_3:+95769811 | None:intergenic |
| CGGGAAAGAAGGATTCGGCT+CGG | 0.598341 | 6_3:-95769529 | Msa0966920:CDS |
| GAAGGATGAATACGTGAAAG+TGG | 0.601146 | 6_3:+95769890 | None:intergenic |
| ACGGACGAGAAAGAAAGGGT+TGG | 0.607719 | 6_3:-95766462 | Msa0966920:CDS |
| TGATACTCTGTCTGAGCCCG+GGG | 0.608826 | 6_3:+95766369 | None:intergenic |
| GAAACCATCAGCGGAGCTGG+TGG | 0.618402 | 6_3:+95769766 | None:intergenic |
| CAATTGTTTGAAGACATGAA+AGG | 0.628073 | 6_3:+95770009 | None:intergenic |
| CGTCACGGACGAGAAAGAAA+GGG | 0.630621 | 6_3:-95766466 | Msa0966920:CDS |
| CATGCTTCTAAACGTCCCCA+TGG | 0.635204 | 6_3:+95766283 | None:intergenic |
| TGAATACGTGAAAGTGGTGA+TGG | 0.640926 | 6_3:+95769896 | None:intergenic |
| TTGTGTTCAAGGTTACCACC+AGG | 0.654136 | 6_3:-95766112 | Msa0966920:CDS |
| AAAAGTGTTCAAGAGCGTCA+CGG | 0.669596 | 6_3:-95766481 | Msa0966920:CDS |
| GGAGTGCATTGGAGTCGAGG+TGG | 0.675035 | 6_3:+95769744 | None:intergenic |
| ATCACAAACCCTTTACCTGG+TGG | 0.684939 | 6_3:+95766097 | None:intergenic |
| CATACACAGACAAACACAGA+GGG | 0.691750 | 6_3:+95769699 | None:intergenic |
| TGAACCGGAATGTAGTCCGG+TGG | 0.695792 | 6_3:-95769450 | Msa0966920:CDS |
| GACAAATGGTGTGACCATTG+AGG | 0.703421 | 6_3:+95766396 | None:intergenic |
| GTCGAGGTGGAAACCATCAG+CGG | 0.705214 | 6_3:+95769757 | None:intergenic |
| AGAGTATCAAGATCAAACCC+CGG | 0.719340 | 6_3:-95766355 | Msa0966920:CDS |
| GAAGAATTAGCCATGCGCCG+GGG | 0.725892 | 6_3:+95766338 | None:intergenic |
| GTGAGTAGCTGGAAACCATG+GGG | 0.739154 | 6_3:-95766298 | Msa0966920:CDS |
| TGGTTTCCAGCTACTCACTG+AGG | 0.744962 | 6_3:+95766303 | None:intergenic |
| GCATACACAGACAAACACAG+AGG | 0.786916 | 6_3:+95769698 | None:intergenic |
CRISPR-GE
| badsite warning | sgRNA_sequence | Strand | Position | Region | GC_content |
|---|---|---|---|---|---|
| !!! | ATTTTTAATAAAATAATAAA+AGG | + | chr6_3:95767133-95767152 | None:intergenic | 0.0% |
| !! | AAAGTTATCATATTATTAAA+AGG | - | chr6_3:95767000-95767019 | Msa0966920:intron | 10.0% |
| !!! | ATAACATAATATTTTTTTGA+AGG | + | chr6_3:95767159-95767178 | None:intergenic | 10.0% |
| !! | TTAATTAACAAAGATAATTA+TGG | - | chr6_3:95767379-95767398 | Msa0966920:intron | 10.0% |
| !!! | AAAAATACTTAGTTTAAAAT+TGG | + | chr6_3:95768736-95768755 | None:intergenic | 10.0% |
| !! | TTAAATTTATAAATCTACCA+TGG | + | chr6_3:95766716-95766735 | None:intergenic | 15.0% |
| !! | ATCATATTATTAAAAGGAAA+AGG | - | chr6_3:95767006-95767025 | Msa0966920:intron | 15.0% |
| !!! | ACGATTTTAAATATTTTGAT+TGG | + | chr6_3:95768174-95768193 | None:intergenic | 15.0% |
| !!! | ATTAGTGTTTTTAATTTATG+TGG | - | chr6_3:95768201-95768220 | Msa0966920:intron | 15.0% |
| !! | ATTAAAAAGAGTTTAATGAT+GGG | + | chr6_3:95768273-95768292 | None:intergenic | 15.0% |
| !! | TATTAAAAAGAGTTTAATGA+TGG | + | chr6_3:95768274-95768293 | None:intergenic | 15.0% |
| !! | TATCTCTATTAAACATATTT+AGG | - | chr6_3:95768405-95768424 | Msa0966920:intron | 15.0% |
| !! | AAACATAATAATTTAGTAGT+TGG | + | chr6_3:95768892-95768911 | None:intergenic | 15.0% |
| !!! | ATCAATTTTTTTTATCTTTC+AGG | - | chr6_3:95769446-95769465 | Msa0966920:CDS | 15.0% |
| !! | TTGGTTTATGTAATAAGATT+TGG | + | chr6_3:95765966-95765985 | None:intergenic | 20.0% |
| !!! | TTTATTTTTTGTGTTCACAT+TGG | - | chr6_3:95766749-95766768 | Msa0966920:intron | 20.0% |
| !!! | TCTTTAAAAATCAAACGATT+TGG | - | chr6_3:95766777-95766796 | Msa0966920:intron | 20.0% |
| !! | CACTATCAGAAAAAATTAAA+TGG | - | chr6_3:95766977-95766996 | Msa0966920:intron | 20.0% |
| !!! | TTTTATGTTGGTTGAAAAAA+TGG | - | chr6_3:95767036-95767055 | Msa0966920:intron | 20.0% |
| !! | ATTAACAAAGATAATTATGG+TGG | - | chr6_3:95767382-95767401 | Msa0966920:intron | 20.0% |
| !!! | TTTTTTTCCTCAATTCTTAT+TGG | + | chr6_3:95767770-95767789 | None:intergenic | 20.0% |
| !! | AATTGTACCATATCATATTA+TGG | - | chr6_3:95768099-95768118 | Msa0966920:intron | 20.0% |
| !!! | TTAAATATTTTGATTGGTTG+TGG | + | chr6_3:95768168-95768187 | None:intergenic | 20.0% |
| !! | AAAAAAAAACCAGAATTTGA+GGG | + | chr6_3:95768438-95768457 | None:intergenic | 20.0% |
| !! | AAAAAAAAAACCAGAATTTG+AGG | + | chr6_3:95768439-95768458 | None:intergenic | 20.0% |
| !! | CACATTTATGATATGTTATA+TGG | + | chr6_3:95768585-95768604 | None:intergenic | 20.0% |
| !!! | CTAATTTAAAGTAAAATCCA+TGG | - | chr6_3:95768646-95768665 | Msa0966920:intron | 20.0% |
| !! | TATAAACCAATGACAAAAAT+CGG | - | chr6_3:95769203-95769222 | Msa0966920:intron | 20.0% |
| !!! | AATGTTATGAAAGAGTATTA+TGG | - | chr6_3:95769865-95769884 | Msa0966920:CDS | 20.0% |
| !!! | AATAAGATTTGGTGTTGAAA+AGG | + | chr6_3:95765955-95765974 | None:intergenic | 25.0% |
| ! | CTAAATTTGCAACTAAAAAC+CGG | + | chr6_3:95766606-95766625 | None:intergenic | 25.0% |
| !!! | ATCGTTTGATTTTTAAAGAG+TGG | + | chr6_3:95766776-95766795 | None:intergenic | 25.0% |
| !!! | ATCAAACGATTTGGTTAAAT+CGG | - | chr6_3:95766786-95766805 | Msa0966920:intron | 25.0% |
| ! | CTTTCTATGGTTTAGTTATT+TGG | - | chr6_3:95766827-95766846 | Msa0966920:intron | 25.0% |
| !!! | CAATAGTCACTTTTAACTAT+TGG | + | chr6_3:95766873-95766892 | None:intergenic | 25.0% |
| !! | AAAGGAAAATGCTTTTATGT+TGG | - | chr6_3:95767024-95767043 | Msa0966920:intron | 25.0% |
| !! | TGATATCTTCATTAGTTCTT+TGG | + | chr6_3:95767324-95767343 | None:intergenic | 25.0% |
| !! | GTGGGTTAATTAATTAACTA+TGG | - | chr6_3:95767444-95767463 | Msa0966920:intron | 25.0% |
| ! | TAATGTATAGTTTAAGCTCA+TGG | - | chr6_3:95767479-95767498 | Msa0966920:intron | 25.0% |
| ! | AATGTATAGTTTAAGCTCAT+GGG | - | chr6_3:95767480-95767499 | Msa0966920:intron | 25.0% |
| ! | GATTAAATGACATATATGGT+AGG | + | chr6_3:95767536-95767555 | None:intergenic | 25.0% |
| !! | ACCATATATGTCATTTAATC+AGG | - | chr6_3:95767536-95767555 | Msa0966920:intron | 25.0% |
| ! | ACCTGATTAAATGACATATA+TGG | + | chr6_3:95767540-95767559 | None:intergenic | 25.0% |
| ! | TCAATGAAATGAGTACAAAA+TGG | + | chr6_3:95767638-95767657 | None:intergenic | 25.0% |
| !! | ATTTTGTACTCATTTCATTG+AGG | - | chr6_3:95767637-95767656 | Msa0966920:intron | 25.0% |
| !!! | ACAACCATTTTTAACAACTT+TGG | - | chr6_3:95767672-95767691 | Msa0966920:intron | 25.0% |
| ! | ATAACAATAGAGAGAGAAAA+AGG | + | chr6_3:95767744-95767763 | None:intergenic | 25.0% |
| ! | TTATTGTCCAATAAGAATTG+AGG | - | chr6_3:95767760-95767779 | Msa0966920:intron | 25.0% |
| ! | ATCCAATTTCAAACAACTTT+AGG | + | chr6_3:95767800-95767819 | None:intergenic | 25.0% |
| ! | TAATACAAAACTTGTGGATA+GGG | + | chr6_3:95767966-95767985 | None:intergenic | 25.0% |
| ! | CTTAATCATCAAAGTCATAA+TGG | + | chr6_3:95768014-95768033 | None:intergenic | 25.0% |
| !! | CATTATGACTTTGATGATTA+AGG | - | chr6_3:95768012-95768031 | Msa0966920:intron | 25.0% |
| ! | GTTTACACCATAATATGATA+TGG | + | chr6_3:95768109-95768128 | None:intergenic | 25.0% |
| ! | TTAATCTTAAAGAGTCTCTT+AGG | + | chr6_3:95768319-95768338 | None:intergenic | 25.0% |
| !! | CTGTTTATTTAAGGTTGAAA+AGG | + | chr6_3:95768618-95768637 | None:intergenic | 25.0% |
| ! | GAGAAGTTTCTGTTTATTTA+AGG | + | chr6_3:95768627-95768646 | None:intergenic | 25.0% |
| !! | TTTTTCCCACTTATTCTTTA+AGG | - | chr6_3:95768751-95768770 | Msa0966920:intron | 25.0% |
| !!! | ATTTTTTCACAAGGACATAA+AGG | + | chr6_3:95768784-95768803 | None:intergenic | 25.0% |
| !! | TTTGACACAACTAATTTTGT+AGG | - | chr6_3:95769159-95769178 | Msa0966920:intron | 25.0% |
| !!! | TTTTTATCTTTCAGGTCTAA+TGG | - | chr6_3:95769454-95769473 | Msa0966920:CDS | 25.0% |
| !!! | TATAGGTATTCCGTTATTTT+CGG | + | chr6_3:95769794-95769813 | None:intergenic | 25.0% |
| ! | CATTATAATCAATGCAGAAT+TGG | + | chr6_3:95769849-95769868 | None:intergenic | 25.0% |
| GTTTCGTAGTTTAAGAAAGA+GGG | + | chr6_3:95765923-95765942 | None:intergenic | 30.0% | |
| AGTTTCGTAGTTTAAGAAAG+AGG | + | chr6_3:95765924-95765943 | None:intergenic | 30.0% | |
| !! | AAGACATGAAAGGTATGTTT+TGG | + | chr6_3:95765985-95766004 | None:intergenic | 30.0% |
| CAATTGTTTGAAGACATGAA+AGG | + | chr6_3:95765995-95766014 | None:intergenic | 30.0% | |
| AACCAAACAACAAAGAACAA+TGG | - | chr6_3:95766017-95766036 | Msa0966920:CDS | 30.0% | |
| !! | ATCCATTGTTCTTTGTTGTT+TGG | + | chr6_3:95766022-95766041 | None:intergenic | 30.0% |
| ATATGAATGGTGCAAAAACA+TGG | + | chr6_3:95766150-95766169 | None:intergenic | 30.0% | |
| AGGGAAATTTGGTATATGAA+TGG | + | chr6_3:95766163-95766182 | None:intergenic | 30.0% | |
| CTATGAACTAAAGCTTTCTA+TGG | - | chr6_3:95766814-95766833 | Msa0966920:intron | 30.0% | |
| TTAATTAACCCACCATAATG+TGG | + | chr6_3:95767437-95767456 | None:intergenic | 30.0% | |
| CTTTGCTTGTCAATATCTTT+AGG | - | chr6_3:95767503-95767522 | Msa0966920:intron | 30.0% | |
| GTCACCAAAGTTGTTAAAAA+TGG | + | chr6_3:95767679-95767698 | None:intergenic | 30.0% | |
| ! | CACCTAAAGTTGTTTGAAAT+TGG | - | chr6_3:95767795-95767814 | Msa0966920:intron | 30.0% |
| TATCATTCCTCCATTTCATT+TGG | - | chr6_3:95767827-95767846 | Msa0966920:intron | 30.0% | |
| ATTCATGACACCAAATGAAA+TGG | + | chr6_3:95767840-95767859 | None:intergenic | 30.0% | |
| ! | GTGTCAAGTAAACATGTTTT+TGG | + | chr6_3:95767909-95767928 | None:intergenic | 30.0% |
| CTAATACAAAACTTGTGGAT+AGG | + | chr6_3:95767967-95767986 | None:intergenic | 30.0% | |
| !! | CTATCCACAAGTTTTGTATT+AGG | - | chr6_3:95767965-95767984 | Msa0966920:intron | 30.0% |
| ! | ATCATCAAAGTCATAATGGA+GGG | + | chr6_3:95768010-95768029 | None:intergenic | 30.0% |
| AATCATCAAAGTCATAATGG+AGG | + | chr6_3:95768011-95768030 | None:intergenic | 30.0% | |
| !!! | GCAATTCAGAATGTTTTGAT+TGG | - | chr6_3:95768223-95768242 | Msa0966920:intron | 30.0% |
| ATTAAGATAGACTCAAGACT+CGG | - | chr6_3:95768334-95768353 | Msa0966920:intron | 30.0% | |
| GAGTACCTTAAAGAATAAGT+GGG | + | chr6_3:95768759-95768778 | None:intergenic | 30.0% | |
| TGAGTACCTTAAAGAATAAG+TGG | + | chr6_3:95768760-95768779 | None:intergenic | 30.0% | |
| !!! | AAAGGGGAAATTTTTTCACA+AGG | + | chr6_3:95768793-95768812 | None:intergenic | 30.0% |
| !! | AGTGGACTTTAATTTGAAAG+GGG | + | chr6_3:95768809-95768828 | None:intergenic | 30.0% |
| !! | GAGTGGACTTTAATTTGAAA+GGG | + | chr6_3:95768810-95768829 | None:intergenic | 30.0% |
| !! | TGAGTGGACTTTAATTTGAA+AGG | + | chr6_3:95768811-95768830 | None:intergenic | 30.0% |
| AAGTCCACTCATTTAAAAAC+AGG | - | chr6_3:95768820-95768839 | Msa0966920:intron | 30.0% | |
| !!! | TGAACCTGTTTTTAAATGAG+TGG | + | chr6_3:95768827-95768846 | None:intergenic | 30.0% |
| GTTGCATATATAACCAGATT+TGG | - | chr6_3:95768934-95768953 | Msa0966920:intron | 30.0% | |
| GACAGTTATGTATCATAGTT+TGG | + | chr6_3:95768983-95769002 | None:intergenic | 30.0% | |
| ACTATGATACATAACTGTCA+TGG | - | chr6_3:95768984-95769003 | Msa0966920:intron | 30.0% | |
| AGAGACATATGAAAATCGAA+CGG | + | chr6_3:95769421-95769440 | None:intergenic | 30.0% | |
| ATCCACAATGAATGTGAAAA+AGG | - | chr6_3:95769819-95769838 | Msa0966920:CDS | 30.0% | |
| TCCACAATGAATGTGAAAAA+GGG | - | chr6_3:95769820-95769839 | Msa0966920:CDS | 30.0% | |
| ! | AGTATTATGGATTGTGTTCA+AGG | - | chr6_3:95769878-95769897 | Msa0966920:CDS | 30.0% |
| ! | AGCTTTTCTCTCATAAACTT+AGG | - | chr6_3:95770064-95770083 | Msa0966920:five_prime_UTR | 30.0% |
| TCAACTGTTAGACGTACAAA+TGG | + | chr6_3:95766051-95766070 | None:intergenic | 35.0% | |
| ! | CATGGTATTGTTGTTGTTGA+AGG | + | chr6_3:95766132-95766151 | None:intergenic | 35.0% |
| ! | ATAGCAAGTTCGAAGCTTTT+AGG | - | chr6_3:95766351-95766370 | Msa0966920:CDS | 35.0% |
| CGTTCAGTTATGTTTCATAG+TGG | - | chr6_3:95766414-95766433 | Msa0966920:CDS | 35.0% | |
| ! | CAGTTATGTTTCATAGTGGA+TGG | - | chr6_3:95766418-95766437 | Msa0966920:CDS | 35.0% |
| AAAGAAGAAAGGGTTTGAAC+CGG | - | chr6_3:95766452-95766471 | Msa0966920:CDS | 35.0% | |
| CCAAATTGAAAAACAAACCG+TGG | + | chr6_3:95766528-95766547 | None:intergenic | 35.0% | |
| !! | CCACGGTTTGTTTTTCAATT+TGG | - | chr6_3:95766525-95766544 | Msa0966920:CDS | 35.0% |
| !! | CGGTTTGTTTTTCAATTTGG+AGG | - | chr6_3:95766528-95766547 | Msa0966920:CDS | 35.0% |
| ! | TTTTCAATTTGGAGGTGAAC+CGG | - | chr6_3:95766536-95766555 | Msa0966920:CDS | 35.0% |
| TCTTGAATCTGAAAAACCAC+CGG | + | chr6_3:95766570-95766589 | None:intergenic | 35.0% | |
| TCAAGAGAATATTAGACAGC+CGG | - | chr6_3:95766584-95766603 | Msa0966920:intron | 35.0% | |
| CTGATCGAAATTCTAGATCA+AGG | - | chr6_3:95766628-95766647 | Msa0966920:intron | 35.0% | |
| ATTCTAGATCAAGGTGAGTT+TGG | - | chr6_3:95766637-95766656 | Msa0966920:intron | 35.0% | |
| !! | GATAATTATGGTGGACCATT+TGG | - | chr6_3:95767391-95767410 | Msa0966920:intron | 35.0% |
| CACTTGTAAAACTAGCCAAA+TGG | + | chr6_3:95767409-95767428 | None:intergenic | 35.0% | |
| !!! | CATTTGGCTAGTTTTACAAG+TGG | - | chr6_3:95767407-95767426 | Msa0966920:intron | 35.0% |
| CTTGTCAATATCTTTAGGCT+AGG | - | chr6_3:95767508-95767527 | Msa0966920:intron | 35.0% | |
| AATGAGATTGAGCTGGATAA+GGG | + | chr6_3:95767585-95767604 | None:intergenic | 35.0% | |
| TAATGAGATTGAGCTGGATA+AGG | + | chr6_3:95767586-95767605 | None:intergenic | 35.0% | |
| ! | ACATGATAATGAGATTGAGC+TGG | + | chr6_3:95767592-95767611 | None:intergenic | 35.0% |
| ACAGCCTAATACAAAACTTG+TGG | + | chr6_3:95767972-95767991 | None:intergenic | 35.0% | |
| ! | TTACGTGTGCAAAGTTGTTT+TGG | - | chr6_3:95768246-95768265 | Msa0966920:intron | 35.0% |
| TTCTAACTCAGCAAAAACCA+TGG | + | chr6_3:95768666-95768685 | None:intergenic | 35.0% | |
| ! | GCACGTTTGACATTTTCATT+AGG | - | chr6_3:95769067-95769086 | Msa0966920:intron | 35.0% |
| ! | AGTCATCCGATTTTTGTCAT+TGG | + | chr6_3:95769212-95769231 | None:intergenic | 35.0% |
| GAACTCGTAACCGAAAATAA+CGG | - | chr6_3:95769781-95769800 | Msa0966920:CDS | 35.0% | |
| TTCATTGTGGATTCAGCTAT+AGG | + | chr6_3:95769811-95769830 | None:intergenic | 35.0% | |
| !! | ACCCTTTTTCACATTCATTG+TGG | + | chr6_3:95769824-95769843 | None:intergenic | 35.0% |
| ACAATGAATGTGAAAAAGGG+TGG | - | chr6_3:95769823-95769842 | Msa0966920:CDS | 35.0% | |
| ! | AGTAAACCTTTTGTGCAAGT+TGG | - | chr6_3:95769958-95769977 | Msa0966920:CDS | 35.0% |
| TGCACAACATGTTACATGTA+TGG | - | chr6_3:95769981-95770000 | Msa0966920:exon | 35.0% | |
| TGCTGCTATTGATCTTAGTA+TGG | - | chr6_3:95770032-95770051 | Msa0966920:five_prime_UTR | 35.0% | |
| GTAGTTTAAGAAAGAGGGTG+TGG | + | chr6_3:95765918-95765937 | None:intergenic | 40.0% | |
| !! | TGTTGGTGATGGAAGGTTTA+GGG | + | chr6_3:95766082-95766101 | None:intergenic | 40.0% |
| !! | TTGTTGGTGATGGAAGGTTT+AGG | + | chr6_3:95766083-95766102 | None:intergenic | 40.0% |
| !!! | ATGGTTTTGTTGGTGATGGA+AGG | + | chr6_3:95766089-95766108 | None:intergenic | 40.0% |
| !!! | GAAAGTGGTGATGGTTTTGT+TGG | + | chr6_3:95766099-95766118 | None:intergenic | 40.0% |
| TGAATACGTGAAAGTGGTGA+TGG | + | chr6_3:95766108-95766127 | None:intergenic | 40.0% | |
| GAAGGATGAATACGTGAAAG+TGG | + | chr6_3:95766114-95766133 | None:intergenic | 40.0% | |
| GTGGTTTGAGAAGGGAAATT+TGG | + | chr6_3:95766174-95766193 | None:intergenic | 40.0% | |
| ! | GAAGAAGTGTGGTTTGAGAA+GGG | + | chr6_3:95766182-95766201 | None:intergenic | 40.0% |
| GATGAAGATGATGAAGAGAG+TGG | + | chr6_3:95766204-95766223 | None:intergenic | 40.0% | |
| CATACACAGACAAACACAGA+GGG | + | chr6_3:95766305-95766324 | None:intergenic | 40.0% | |
| TTGTGCTGGGAAAGAAGAAA+GGG | - | chr6_3:95766442-95766461 | Msa0966920:CDS | 40.0% | |
| AAGAAGAAAGGGTTTGAACC+GGG | - | chr6_3:95766453-95766472 | Msa0966920:CDS | 40.0% | |
| TGAAAAACAAACCGTGGATC+CGG | + | chr6_3:95766522-95766541 | None:intergenic | 40.0% | |
| CTCTATGCTAATGTTAGCCA+TGG | - | chr6_3:95766696-95766715 | Msa0966920:intron | 40.0% | |
| !!! | TTGGCTAGTTTTACAAGTGG+TGG | - | chr6_3:95767410-95767429 | Msa0966920:intron | 40.0% |
| TCATTATCATGTCTCTCTCG+TGG | - | chr6_3:95767600-95767619 | Msa0966920:intron | 40.0% | |
| CATGACACCAAATGAAATGG+AGG | + | chr6_3:95767837-95767856 | None:intergenic | 40.0% | |
| GGTTTATGTCCCTCAAATTC+TGG | - | chr6_3:95768426-95768445 | Msa0966920:intron | 40.0% | |
| CTTGTCTGTTTGACCAAATC+TGG | + | chr6_3:95768950-95768969 | None:intergenic | 40.0% | |
| CTATGCAATTCATGATCACG+AGG | + | chr6_3:95769305-95769324 | None:intergenic | 40.0% | |
| TTGCAAACACTCCTAGTAGA+TGG | - | chr6_3:95769485-95769504 | Msa0966920:CDS | 40.0% | |
| ACACTCCTAGTAGATGGAAA+AGG | - | chr6_3:95769491-95769510 | Msa0966920:CDS | 40.0% | |
| CACTCCTAGTAGATGGAAAA+GGG | - | chr6_3:95769492-95769511 | Msa0966920:CDS | 40.0% | |
| ! | AATGCCCTTTTCCATCTACT+AGG | + | chr6_3:95769499-95769518 | None:intergenic | 40.0% |
| !! | AAAAGTGTTCAAGAGCGTCA+CGG | - | chr6_3:95769520-95769539 | Msa0966920:CDS | 40.0% |
| ATAACAGTTCACGATCTCTC+TGG | - | chr6_3:95769565-95769584 | Msa0966920:CDS | 40.0% | |
| ! | AGAGTATCAAGATCAAACCC+CGG | - | chr6_3:95769646-95769665 | Msa0966920:CDS | 40.0% |
| TGGCTAATTCTTCGTCCAAA+CGG | - | chr6_3:95769673-95769692 | Msa0966920:CDS | 40.0% | |
| ! | TTAGAAGCATGGAGAGAAAG+AGG | - | chr6_3:95769730-95769749 | Msa0966920:CDS | 40.0% |
| AGAGAAAGAGGTCATGTAGA+TGG | - | chr6_3:95769742-95769761 | Msa0966920:CDS | 40.0% | |
| ! | GTGATGAGTTCTAGTGTTGA+AGG | - | chr6_3:95769922-95769941 | Msa0966920:CDS | 40.0% |
| ! | AGTTCTAGTGTTGAAGGTGA+AGG | - | chr6_3:95769928-95769947 | Msa0966920:CDS | 40.0% |
| !!! | GGTGATGGTTTTGTTGGTGA+TGG | + | chr6_3:95766093-95766112 | None:intergenic | 45.0% |
| ! | GGAAGAAGTGTGGTTTGAGA+AGG | + | chr6_3:95766183-95766202 | None:intergenic | 45.0% |
| TGAAGAGAGTGGAAGAAGTG+TGG | + | chr6_3:95766193-95766212 | None:intergenic | 45.0% | |
| ACAGACAAACACAGAGGGAT+AGG | + | chr6_3:95766300-95766319 | None:intergenic | 45.0% | |
| GCATACACAGACAAACACAG+AGG | + | chr6_3:95766306-95766325 | None:intergenic | 45.0% | |
| CTGTGTTTGTCTGTGTATGC+TGG | - | chr6_3:95766306-95766325 | Msa0966920:CDS | 45.0% | |
| ! | TCTGTGTATGCTGGAAGCAT+GGG | - | chr6_3:95766315-95766334 | Msa0966920:CDS | 45.0% |
| CTTGTGCTGGGAAAGAAGAA+AGG | - | chr6_3:95766441-95766460 | Msa0966920:CDS | 45.0% | |
| TGAACCGGGAAAGAAGGATT+CGG | - | chr6_3:95766467-95766486 | Msa0966920:CDS | 45.0% | |
| AAAACCACCGGACTACATTC+CGG | + | chr6_3:95766558-95766577 | None:intergenic | 45.0% | |
| !! | ACAAGTGGTGGACCACATTA+TGG | - | chr6_3:95767422-95767441 | Msa0966920:intron | 45.0% |
| CCAGATACTAGCACATGGTA+GGG | + | chr6_3:95769013-95769032 | None:intergenic | 45.0% | |
| ACCAGATACTAGCACATGGT+AGG | + | chr6_3:95769014-95769033 | None:intergenic | 45.0% | |
| TGCTACCAGATACTAGCACA+TGG | + | chr6_3:95769018-95769037 | None:intergenic | 45.0% | |
| !! | ACTCGGATATTGATTCCCTG+CGG | + | chr6_3:95769261-95769280 | None:intergenic | 45.0% |
| GACAAATGGTGTGACCATTG+AGG | + | chr6_3:95769608-95769627 | None:intergenic | 45.0% | |
| AGTGAGTAGCTGGAAACCAT+GGG | - | chr6_3:95769702-95769721 | Msa0966920:CDS | 45.0% | |
| AAGAGGTCATGTAGATGGCT+TGG | - | chr6_3:95769747-95769766 | Msa0966920:CDS | 45.0% | |
| AGAGGTCATGTAGATGGCTT+GGG | - | chr6_3:95769748-95769767 | Msa0966920:CDS | 45.0% | |
| TTGTGTTCAAGGTTACCACC+AGG | - | chr6_3:95769889-95769908 | Msa0966920:CDS | 45.0% | |
| TCAAGGTTACCACCAGGTAA+AGG | - | chr6_3:95769895-95769914 | Msa0966920:CDS | 45.0% | |
| CAAGGTTACCACCAGGTAAA+GGG | - | chr6_3:95769896-95769915 | Msa0966920:CDS | 45.0% | |
| ATCACAAACCCTTTACCTGG+TGG | + | chr6_3:95769907-95769926 | None:intergenic | 45.0% | |
| CTCATCACAAACCCTTTACC+TGG | + | chr6_3:95769910-95769929 | None:intergenic | 45.0% | |
| TGTGCACCAACTTGCACAAA+AGG | + | chr6_3:95769967-95769986 | None:intergenic | 45.0% | |
| !!! | TTAATTAATTTTTTTTTTGA+AGG | + | chr6_3:95767367-95767386 | None:intergenic | 5.0% |
| !!! | TATATTTTTTTTATTTTACT+CGG | + | chr6_3:95769278-95769297 | None:intergenic | 5.0% |
| GTCTGTGTATGCTGGAAGCA+TGG | - | chr6_3:95766314-95766333 | Msa0966920:CDS | 50.0% | |
| !! | TCATAGTGGATGGCTTGTGC+TGG | - | chr6_3:95766428-95766447 | Msa0966920:CDS | 50.0% |
| !! | CATAGTGGATGGCTTGTGCT+GGG | - | chr6_3:95766429-95766448 | Msa0966920:CDS | 50.0% |
| AGGGTTTGAACCGGGAAAGA+AGG | - | chr6_3:95766461-95766480 | Msa0966920:CDS | 50.0% | |
| CTCGGGTTCATTTCGTGGTT+CGG | - | chr6_3:95766490-95766509 | Msa0966920:CDS | 50.0% | |
| !! | TTTCGTGGTTCGGTCTGAAC+CGG | - | chr6_3:95766500-95766519 | Msa0966920:CDS | 50.0% |
| AGGTGAACCGGAATGTAGTC+CGG | - | chr6_3:95766548-95766567 | Msa0966920:intron | 50.0% | |
| !! | AGTGGTGGACCACATTATGG+TGG | - | chr6_3:95767425-95767444 | Msa0966920:intron | 50.0% |
| !! | GTGGTGGACCACATTATGGT+GGG | - | chr6_3:95767426-95767445 | Msa0966920:intron | 50.0% |
| TCAGGTGCACATGCTTAGTC+TGG | - | chr6_3:95767554-95767573 | Msa0966920:intron | 50.0% | |
| CCCTACCATGTGCTAGTATC+TGG | - | chr6_3:95769010-95769029 | Msa0966920:intron | 50.0% | |
| TACCGTCACTATTTGACCGC+AGG | - | chr6_3:95769242-95769261 | Msa0966920:intron | 50.0% | |
| ACCGTCACTATTTGACCGCA+GGG | - | chr6_3:95769243-95769262 | Msa0966920:intron | 50.0% | |
| TCCCTGCGGTCAAATAGTGA+CGG | + | chr6_3:95769247-95769266 | None:intergenic | 50.0% | |
| CGTCACGGACGAGAAAGAAA+GGG | - | chr6_3:95769535-95769554 | Msa0966920:CDS | 50.0% | |
| ACGGACGAGAAAGAAAGGGT+TGG | - | chr6_3:95769539-95769558 | Msa0966920:CDS | 50.0% | |
| ! | TCACGATCTCTCTGGTTCAC+CGG | - | chr6_3:95769573-95769592 | Msa0966920:CDS | 50.0% |
| TTGATACTCTGTCTGAGCCC+GGG | + | chr6_3:95769636-95769655 | None:intergenic | 50.0% | |
| CTTGATACTCTGTCTGAGCC+CGG | + | chr6_3:95769637-95769656 | None:intergenic | 50.0% | |
| ACGAAGAATTAGCCATGCGC+CGG | + | chr6_3:95769668-95769687 | None:intergenic | 50.0% | |
| TGGTTTCCAGCTACTCACTG+AGG | + | chr6_3:95769701-95769720 | None:intergenic | 50.0% | |
| CAGTGAGTAGCTGGAAACCA+TGG | - | chr6_3:95769701-95769720 | Msa0966920:CDS | 50.0% | |
| GTGAGTAGCTGGAAACCATG+GGG | - | chr6_3:95769703-95769722 | Msa0966920:CDS | 50.0% | |
| CATGCTTCTAAACGTCCCCA+TGG | + | chr6_3:95769721-95769740 | None:intergenic | 50.0% | |
| CATGGGGACGTTTAGAAGCA+TGG | - | chr6_3:95769719-95769738 | Msa0966920:CDS | 50.0% | |
| GTCGAGGTGGAAACCATCAG+CGG | + | chr6_3:95766247-95766266 | None:intergenic | 55.0% | |
| TGTGAGACGCTGGAGTGCAT+TGG | + | chr6_3:95766271-95766290 | None:intergenic | 55.0% | |
| AATGCACTCCAGCGTCTCAC+AGG | - | chr6_3:95766270-95766289 | Msa0966920:CDS | 55.0% | |
| TAGGTTTGCCTGTGAGACGC+TGG | + | chr6_3:95766281-95766300 | None:intergenic | 55.0% | |
| ! | GGAAGCATGGGTCGAACTTG+CGG | - | chr6_3:95766327-95766346 | Msa0966920:CDS | 55.0% |
| CGAGCCGAATCCTTCTTTCC+CGG | + | chr6_3:95766474-95766493 | None:intergenic | 55.0% | |
| CGGGAAAGAAGGATTCGGCT+CGG | - | chr6_3:95766472-95766491 | Msa0966920:CDS | 55.0% | |
| GGGAAAGAAGGATTCGGCTC+GGG | - | chr6_3:95766473-95766492 | Msa0966920:CDS | 55.0% | |
| !! | TTCGGCTCGGGTTCATTTCG+TGG | - | chr6_3:95766485-95766504 | Msa0966920:CDS | 55.0% |
| TTCGGTCTGAACCGGATCCA+CGG | - | chr6_3:95766508-95766527 | Msa0966920:CDS | 55.0% | |
| TGAACCGGAATGTAGTCCGG+TGG | - | chr6_3:95766551-95766570 | Msa0966920:intron | 55.0% | |
| GCGTCACGGACGAGAAAGAA+AGG | - | chr6_3:95769534-95769553 | Msa0966920:CDS | 55.0% | |
| ACCATTGAGGCTGCAGCAAC+CGG | + | chr6_3:95769595-95769614 | None:intergenic | 55.0% | |
| CACACCATTTGTCCCATCCC+CGG | - | chr6_3:95769615-95769634 | Msa0966920:CDS | 55.0% | |
| ACACCATTTGTCCCATCCCC+GGG | - | chr6_3:95769616-95769635 | Msa0966920:CDS | 55.0% | |
| TGATACTCTGTCTGAGCCCG+GGG | + | chr6_3:95769635-95769654 | None:intergenic | 55.0% | |
| GAAGAATTAGCCATGCGCCG+GGG | + | chr6_3:95769666-95769685 | None:intergenic | 55.0% | |
| CGAAGAATTAGCCATGCGCC+GGG | + | chr6_3:95769667-95769686 | None:intergenic | 55.0% | |
| TCAGCGGAGCTGGTGGTTTC+AGG | + | chr6_3:95766231-95766250 | None:intergenic | 60.0% | |
| GAAACCACCAGCTCCGCTGA+TGG | - | chr6_3:95766231-95766250 | Msa0966920:CDS | 60.0% | |
| GAAACCATCAGCGGAGCTGG+TGG | + | chr6_3:95766238-95766257 | None:intergenic | 60.0% | |
| GTGGAAACCATCAGCGGAGC+TGG | + | chr6_3:95766241-95766260 | None:intergenic | 60.0% | |
| GGAGTGCATTGGAGTCGAGG+TGG | + | chr6_3:95766260-95766279 | None:intergenic | 60.0% | |
| GCTGGAGTGCATTGGAGTCG+AGG | + | chr6_3:95766263-95766282 | None:intergenic | 60.0% | |
| ACCGGTTGCTGCAGCCTCAA+TGG | - | chr6_3:95769591-95769610 | Msa0966920:CDS | 60.0% | |
| CAAGATCAAACCCCGGCGCA+TGG | - | chr6_3:95769653-95769672 | Msa0966920:CDS | 60.0% | |
| !! | CTACTCACTGAGGCGCCGTT+TGG | + | chr6_3:95769691-95769710 | None:intergenic | 60.0% |
| GAGCCCGGGGATGGGACAAA+TGG | + | chr6_3:95769622-95769641 | None:intergenic | 65.0% | |
| CTCTGTCTGAGCCCGGGGAT+GGG | + | chr6_3:95769630-95769649 | None:intergenic | 65.0% | |
| ACTCTGTCTGAGCCCGGGGA+TGG | + | chr6_3:95769631-95769650 | None:intergenic | 65.0% | |
| ACGGCGCCTCAGTGAGTAGC+TGG | - | chr6_3:95769692-95769711 | Msa0966920:CDS | 65.0% |
| Chromosome | Type | Strat | End | Strand | Name |
|---|---|---|---|---|---|
| chr6_3 | gene | 95765898 | 95770125 | 95765898 | ID=Msa0966920;Name=Msa0966920 |
| chr6_3 | mRNA | 95765898 | 95770125 | 95765898 | ID=Msa0966920-mRNA-1;Parent=Msa0966920;Name=Msa0966920-mRNA-1;_AED=0.00;_eAED=0.00;_QI=138|1|0.5|1|1|1|2|0|423 |
| chr6_3 | exon | 95765898 | 95766555 | 95765898 | ID=Msa0966920-mRNA-1:exon:17752;Parent=Msa0966920-mRNA-1 |
| chr6_3 | exon | 95769374 | 95770125 | 95769374 | ID=Msa0966920-mRNA-1:exon:17751;Parent=Msa0966920-mRNA-1 |
| chr6_3 | five_prime_UTR | 95769988 | 95770125 | 95769988 | ID=Msa0966920-mRNA-1:five_prime_utr;Parent=Msa0966920-mRNA-1 |
| chr6_3 | CDS | 95769374 | 95769987 | 95769374 | ID=Msa0966920-mRNA-1:cds;Parent=Msa0966920-mRNA-1 |
| chr6_3 | CDS | 95765898 | 95766555 | 95765898 | ID=Msa0966920-mRNA-1:cds;Parent=Msa0966920-mRNA-1 |
| Gene Sequence |
| Protein sequence |
