Alfalfa Gene Editing Database
Alfalfa Gene Editing Database
| Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|
| Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa0766860 | sp|D2CSU4|CM1_PETHY | 59.281 | 334 | 105 | 5 | 12 | 334 | 11 | 324 | 2.04e-132 | 383 |
| Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa0766860 | A0A072UEK4 | 90.909 | 319 | 14 | 1 | 16 | 334 | 15 | 318 | 0.0 | 583 |
| Gene ID | Type | Classification |
|---|
| Gene ID | Type | Classification |
|---|
Co-expression Network
| Gene1 | Gene2 | correlation coefficient | p_value | FDR |
|---|---|---|---|---|
| Msa0006840 | Msa0766860 | 0.818514 | 1.884104e-52 | -8.615850e-47 |
| Msa0019830 | Msa0766860 | 0.800618 | 1.324495e-48 | -8.615850e-47 |
| Msa0032130 | Msa0766860 | 0.803129 | 4.040098e-49 | -8.615850e-47 |
| Msa0032390 | Msa0766860 | 0.812513 | 4.082507e-51 | -8.615850e-47 |
| Msa0044780 | Msa0766860 | -0.834963 | 2.211560e-56 | -8.615850e-47 |
| Msa0045620 | Msa0766860 | 0.831451 | 1.657046e-55 | -8.615850e-47 |
| Msa0050530 | Msa0766860 | 0.825351 | 4.915715e-54 | -8.615850e-47 |
| Msa0063190 | Msa0766860 | 0.818853 | 1.578464e-52 | -8.615850e-47 |
| Msa0064240 | Msa0766860 | -0.801516 | 8.676876e-49 | -8.615850e-47 |
| Msa0080370 | Msa0766860 | 0.809238 | 2.088152e-50 | -8.615850e-47 |
| Msa0094180 | Msa0766860 | 0.814838 | 1.256388e-51 | -8.615850e-47 |
| Msa0097720 | Msa0766860 | 0.803414 | 3.526662e-49 | -8.615850e-47 |
| Msa0100890 | Msa0766860 | 0.808678 | 2.752294e-50 | -8.615850e-47 |
| Msa0108630 | Msa0766860 | 0.806460 | 8.137937e-50 | -8.615850e-47 |
| Msa0612520 | Msa0766860 | 0.802983 | 4.329905e-49 | -8.615850e-47 |
| Msa0619320 | Msa0766860 | -0.807466 | 4.986886e-50 | -8.615850e-47 |
| Msa0623310 | Msa0766860 | 0.817016 | 4.103734e-52 | -8.615850e-47 |
| Msa0627360 | Msa0766860 | 0.801048 | 1.081934e-48 | -8.615850e-47 |
| Msa0647440 | Msa0766860 | 0.833856 | 4.194516e-56 | -8.615850e-47 |
| Msa0660090 | Msa0766860 | 0.835514 | 1.605290e-56 | -8.615850e-47 |
| Msa0663290 | Msa0766860 | 0.823375 | 1.432842e-53 | -8.615850e-47 |
| Msa0664070 | Msa0766860 | 0.821657 | 3.594150e-53 | -8.615850e-47 |
| Msa0673940 | Msa0766860 | 0.807048 | 6.113924e-50 | -8.615850e-47 |
| Msa0685390 | Msa0766860 | -0.858380 | 8.573550e-63 | -8.615850e-47 |
| Msa0689830 | Msa0766860 | 0.809876 | 1.523119e-50 | -8.615850e-47 |
| Msa0690320 | Msa0766860 | 0.816762 | 4.679734e-52 | -8.615850e-47 |
| Msa0704690 | Msa0766860 | 0.816934 | 4.279952e-52 | -8.615850e-47 |
| Msa0704780 | Msa0766860 | -0.823540 | 1.310858e-53 | -8.615850e-47 |
| Msa0708020 | Msa0766860 | 0.859313 | 4.510830e-63 | -8.615850e-47 |
| Msa0708980 | Msa0766860 | 0.803866 | 2.841680e-49 | -8.615850e-47 |
| Msa0714230 | Msa0766860 | -0.805994 | 1.020399e-49 | -8.615850e-47 |
| Msa0726520 | Msa0766860 | 0.884201 | 2.346910e-71 | -8.615850e-47 |
| Msa0732970 | Msa0766860 | 0.807280 | 5.460894e-50 | -8.615850e-47 |
| Msa0745140 | Msa0766860 | 0.809257 | 2.069029e-50 | -8.615850e-47 |
| Msa0751720 | Msa0766860 | 0.803507 | 3.372472e-49 | -8.615850e-47 |
| Msa0766860 | Msa0771910 | 0.831799 | 1.360016e-55 | -8.615850e-47 |
| Msa0766860 | Msa0776590 | -0.813103 | 3.032756e-51 | -8.615850e-47 |
| Msa0766860 | Msa0776640 | 0.808506 | 2.995512e-50 | -8.615850e-47 |
| Msa0766860 | Msa0825920 | 0.815861 | 7.443242e-52 | -8.615850e-47 |
| Msa0766860 | Msa0831820 | 0.828708 | 7.736882e-55 | -8.615850e-47 |
| Msa0766860 | Msa0846900 | 0.838619 | 2.582588e-57 | -8.615850e-47 |
| Msa0766860 | Msa0850600 | 0.807325 | 5.341033e-50 | -8.615850e-47 |
| Msa0766860 | Msa0876630 | 0.820097 | 8.209640e-53 | -8.615850e-47 |
| Msa0766860 | Msa0900090 | 0.822990 | 1.762328e-53 | -8.615850e-47 |
| Msa0766860 | Msa0901820 | 0.801151 | 1.030702e-48 | -8.615850e-47 |
| Msa0766860 | Msa0965470 | 0.818766 | 1.651720e-52 | -8.615850e-47 |
| Msa0766860 | Msa0966830 | 0.838177 | 3.358405e-57 | -8.615850e-47 |
| Msa0766860 | Msa0966920 | 0.825410 | 4.760283e-54 | -8.615850e-47 |
| Msa0766860 | Msa0978980 | 0.836129 | 1.121571e-56 | -8.615850e-47 |
| Msa0766860 | Msa0999950 | 0.815548 | 8.738217e-52 | -8.615850e-47 |
| Msa0766860 | Msa1001050 | 0.806987 | 6.297860e-50 | -8.615850e-47 |
| Msa0766860 | Msa1008850 | 0.821639 | 3.627373e-53 | -8.615850e-47 |
| Msa0766860 | Msa1021560 | 0.815176 | 1.057287e-51 | -8.615850e-47 |
| Msa0766860 | Msa1025200 | 0.840923 | 6.488044e-58 | -8.615850e-47 |
| Msa0766860 | Msa1025220 | 0.824970 | 6.046765e-54 | -8.615850e-47 |
| Msa0766860 | Msa1042300 | 0.808238 | 3.416337e-50 | -8.615850e-47 |
| Msa0766860 | Msa1050260 | 0.838898 | 2.186882e-57 | -8.615850e-47 |
| Msa0766860 | Msa1057620 | -0.804862 | 1.761578e-49 | -8.615850e-47 |
| Msa0766860 | Msa1071410 | 0.805174 | 1.516227e-49 | -8.615850e-47 |
| Msa0766860 | Msa1078300 | 0.811482 | 6.847718e-51 | -8.615850e-47 |
| Msa0766860 | Msa1078590 | -0.818898 | 1.541636e-52 | -8.615850e-47 |
| Msa0766860 | Msa1078760 | -0.817220 | 3.691987e-52 | -8.615850e-47 |
| Msa0766860 | Msa1083630 | 0.814264 | 1.683218e-51 | -8.615850e-47 |
| Msa0766860 | Msa1085570 | -0.837421 | 5.250191e-57 | -8.615850e-47 |
| Msa0766860 | Msa1085680 | 0.814954 | 1.184377e-51 | -8.615850e-47 |
| Msa0766860 | Msa1088740 | -0.834426 | 3.018563e-56 | -8.615850e-47 |
| Msa0766860 | Msa1101610 | -0.828121 | 1.072278e-54 | -8.615850e-47 |
| Msa0766860 | Msa1127200 | 0.829663 | 4.539036e-55 | -8.615850e-47 |
| Msa0766860 | Msa1128620 | 0.814778 | 1.295314e-51 | -8.615850e-47 |
| Msa0766860 | Msa1130770 | 0.806332 | 8.660014e-50 | -8.615850e-47 |
| Msa0766860 | Msa1130780 | 0.808376 | 3.193222e-50 | -8.615850e-47 |
| Msa0766860 | Msa1130860 | -0.821110 | 4.806018e-53 | -8.615850e-47 |
| Msa0766860 | Msa1130920 | -0.818713 | 1.697994e-52 | -8.615850e-47 |
| Msa0766860 | Msa1133440 | -0.808632 | 2.815433e-50 | -8.615850e-47 |
| Msa0766860 | Msa1144990 | 0.818504 | 1.894228e-52 | -8.615850e-47 |
| Msa0766860 | Msa1148930 | 0.825931 | 3.581036e-54 | -8.615850e-47 |
| Msa0766860 | Msa1165460 | 0.808927 | 2.434261e-50 | -8.615850e-47 |
| Msa0766860 | Msa1169590 | -0.813559 | 2.407526e-51 | -8.615850e-47 |
| Msa0766860 | Msa1183910 | 0.812866 | 3.417004e-51 | -8.615850e-47 |
| Msa0766860 | Msa1190350 | -0.829844 | 4.101440e-55 | -8.615850e-47 |
| Msa0766860 | Msa1206040 | 0.839096 | 1.943897e-57 | -8.615850e-47 |
| Msa0766860 | Msa1217890 | 0.837075 | 6.435831e-57 | -8.615850e-47 |
| Msa0766860 | Msa1220720 | 0.817647 | 2.959050e-52 | -8.615850e-47 |
| Msa0766860 | Msa1240940 | 0.803901 | 2.793934e-49 | -8.615850e-47 |
| Msa0766860 | Msa1243630 | -0.819498 | 1.125102e-52 | -8.615850e-47 |
| Msa0766860 | Msa1244220 | -0.815726 | 7.973573e-52 | -8.615850e-47 |
| Msa0766860 | Msa1254420 | 0.824964 | 6.067104e-54 | -8.615850e-47 |
| Msa0766860 | Msa1255710 | 0.811442 | 6.986912e-51 | -8.615850e-47 |
| Msa0766860 | Msa1265570 | 0.822575 | 2.201581e-53 | -8.615850e-47 |
| Msa0766860 | Msa1266120 | -0.815097 | 1.100565e-51 | -8.615850e-47 |
| Msa0766860 | Msa1273320 | 0.815070 | 1.115841e-51 | -8.615850e-47 |
| Msa0766860 | Msa1281780 | 0.802664 | 5.038276e-49 | -8.615850e-47 |
| Msa0766860 | Msa1282300 | 0.806789 | 6.934150e-50 | -8.615850e-47 |
| Msa0766860 | Msa1283980 | 0.809087 | 2.249961e-50 | -8.615850e-47 |
| Msa0766860 | Msa1288070 | 0.801536 | 8.598835e-49 | -8.615850e-47 |
| Msa0766860 | Msa1294790 | 0.813072 | 3.079549e-51 | -8.615850e-47 |
| Msa0766860 | Msa1297070 | 0.836928 | 7.017033e-57 | -8.615850e-47 |
| Msa0766860 | Msa1308850 | 0.802992 | 4.311754e-49 | -8.615850e-47 |
| Msa0766860 | Msa1321010 | 0.809042 | 2.300264e-50 | -8.615850e-47 |
| Msa0766860 | Msa1328280 | 0.813846 | 2.081797e-51 | -8.615850e-47 |
| Msa0766860 | Msa1328870 | 0.834408 | 3.049428e-56 | -8.615850e-47 |
| Msa0766860 | Msa1334670 | 0.825100 | 5.634329e-54 | -8.615850e-47 |
| Msa0766860 | Msa1361680 | 0.805340 | 1.399546e-49 | -8.615850e-47 |
| Msa0766860 | Msa1362590 | 0.848815 | 4.817493e-60 | -8.615850e-47 |
| Msa0766860 | Msa1365130 | -0.801183 | 1.015252e-48 | -8.615850e-47 |
| Msa0766860 | Msa1365230 | 0.821848 | 3.246116e-53 | -8.615850e-47 |
| Msa0766860 | Msa1366140 | -0.824803 | 6.621546e-54 | -8.615850e-47 |
| Msa0766860 | Msa1367900 | -0.801742 | 7.801870e-49 | -8.615850e-47 |
| Msa0766860 | Msa1368170 | 0.806121 | 9.590991e-50 | -8.615850e-47 |
| Msa0766860 | Msa1371800 | 0.837907 | 3.940056e-57 | -8.615850e-47 |
| Msa0766860 | Msa1372030 | 0.830765 | 2.441857e-55 | -8.615850e-47 |
| Msa0766860 | Msa1376310 | 0.830942 | 2.210461e-55 | -8.615850e-47 |
| Msa0766860 | Msa1381800 | 0.800836 | 1.195518e-48 | -8.615850e-47 |
| Msa0766860 | Msa1385570 | 0.824677 | 7.090574e-54 | -8.615850e-47 |
| Msa0766860 | Msa1387450 | -0.817169 | 3.790915e-52 | -8.615850e-47 |
| Msa0766860 | Msa1407810 | 0.803632 | 3.177862e-49 | -8.615850e-47 |
| Msa0766860 | Msa1417930 | 0.806497 | 7.993653e-50 | -8.615850e-47 |
| Msa0766860 | Msa1421540 | 0.802223 | 6.212895e-49 | -8.615850e-47 |
| Msa0766860 | Msa1431520 | 0.819152 | 1.349581e-52 | -8.615850e-47 |
| Msa0766860 | Msa1434710 | -0.800834 | 1.196366e-48 | -8.615850e-47 |
| Msa0766860 | Msa1437780 | 0.804248 | 2.366546e-49 | -8.615850e-47 |
| Msa0766860 | Msa1438510 | 0.839264 | 1.758328e-57 | -8.615850e-47 |
| Msa0766860 | Msa1447900 | 0.810187 | 1.305699e-50 | -8.615850e-47 |
| Msa0766860 | Msa1450290 | 0.818483 | 1.914398e-52 | -8.615850e-47 |
| Msa0766860 | Msa1451690 | -0.803676 | 3.111558e-49 | -8.615850e-47 |
| Msa0766860 | Msa1456040 | 0.816480 | 5.411015e-52 | -8.615850e-47 |
| Msa0121470 | Msa0766860 | 0.821820 | 3.294491e-53 | -8.615850e-47 |
| Msa0121490 | Msa0766860 | 0.821682 | 3.546709e-53 | -8.615850e-47 |
| Msa0125590 | Msa0766860 | 0.802289 | 6.020993e-49 | -8.615850e-47 |
| Msa0131810 | Msa0766860 | 0.802274 | 6.062521e-49 | -8.615850e-47 |
| Msa0136690 | Msa0766860 | 0.811471 | 6.885407e-51 | -8.615850e-47 |
| Msa0137010 | Msa0766860 | -0.812894 | 3.368587e-51 | -8.615850e-47 |
| Msa0158760 | Msa0766860 | 0.824400 | 8.241199e-54 | -8.615850e-47 |
| Msa0168380 | Msa0766860 | 0.824639 | 7.239857e-54 | -8.615850e-47 |
| Msa0185690 | Msa0766860 | 0.808310 | 3.298588e-50 | -8.615850e-47 |
| Msa0186180 | Msa0766860 | 0.821098 | 4.835619e-53 | -8.615850e-47 |
| Msa0186510 | Msa0766860 | -0.817775 | 2.768628e-52 | -8.615850e-47 |
| Msa0192830 | Msa0766860 | 0.841515 | 4.536050e-58 | -8.615850e-47 |
| Msa0195140 | Msa0766860 | -0.819691 | 1.016885e-52 | -8.615850e-47 |
| Msa0206370 | Msa0766860 | 0.853912 | 1.746077e-61 | -8.615850e-47 |
| Msa0211460 | Msa0766860 | 0.808238 | 3.416768e-50 | -8.615850e-47 |
| Msa0225800 | Msa0766860 | 0.815578 | 8.603601e-52 | -8.615850e-47 |
| Msa0229750 | Msa0766860 | -0.838502 | 2.768006e-57 | -8.615850e-47 |
| Msa0235080 | Msa0766860 | 0.821488 | 3.931715e-53 | -8.615850e-47 |
| Msa0371350 | Msa0766860 | -0.849246 | 3.656294e-60 | -8.615850e-47 |
| Msa0372100 | Msa0766860 | 0.818778 | 1.641320e-52 | -8.615850e-47 |
| Msa0385770 | Msa0766860 | -0.813590 | 2.369389e-51 | -8.615850e-47 |
| Msa0387740 | Msa0766860 | -0.829702 | 4.440932e-55 | -8.615850e-47 |
| Msa0391160 | Msa0766860 | -0.803655 | 3.143590e-49 | -8.615850e-47 |
| Msa0401060 | Msa0766860 | 0.834270 | 3.303558e-56 | -8.615850e-47 |
| Msa0416210 | Msa0766860 | 0.830176 | 3.403334e-55 | -8.615850e-47 |
| Msa0419420 | Msa0766860 | -0.851334 | 9.498000e-61 | -8.615850e-47 |
| Msa0422690 | Msa0766860 | 0.802747 | 4.843450e-49 | -8.615850e-47 |
| Msa0422820 | Msa0766860 | 0.830688 | 2.551342e-55 | -8.615850e-47 |
| Msa0422900 | Msa0766860 | 0.803611 | 3.209959e-49 | -8.615850e-47 |
| Msa0429970 | Msa0766860 | 0.814001 | 1.923693e-51 | -8.615850e-47 |
| Msa0432200 | Msa0766860 | 0.810113 | 1.354326e-50 | -8.615850e-47 |
| Msa0432690 | Msa0766860 | 0.812276 | 4.599376e-51 | -8.615850e-47 |
| Msa0433630 | Msa0766860 | 0.821624 | 3.658031e-53 | -8.615850e-47 |
| Msa0434090 | Msa0766860 | 0.802058 | 6.716482e-49 | -8.615850e-47 |
| Msa0436610 | Msa0766860 | -0.811438 | 7.000984e-51 | -8.615850e-47 |
| Msa0438680 | Msa0766860 | -0.818719 | 1.692966e-52 | -8.615850e-47 |
| Msa0447870 | Msa0766860 | 0.801698 | 7.965368e-49 | -8.615850e-47 |
| Msa0469060 | Msa0766860 | 0.844699 | 6.430437e-59 | -8.615850e-47 |
| Msa0478200 | Msa0766860 | 0.802212 | 6.245647e-49 | -8.615850e-47 |
| Msa0481670 | Msa0766860 | 0.800058 | 1.722373e-48 | -8.615850e-47 |
| Msa0238960 | Msa0766860 | -0.814304 | 1.649764e-51 | -8.615850e-47 |
| Msa0240590 | Msa0766860 | -0.829775 | 4.262457e-55 | -8.615850e-47 |
| Msa0260570 | Msa0766860 | 0.827128 | 1.855929e-54 | -8.615850e-47 |
| Msa0260630 | Msa0766860 | 0.814093 | 1.836200e-51 | -8.615850e-47 |
| Msa0260980 | Msa0766860 | 0.811818 | 5.788640e-51 | -8.615850e-47 |
| Msa0267450 | Msa0766860 | -0.817407 | 3.351688e-52 | -8.615850e-47 |
| Msa0267510 | Msa0766860 | -0.815714 | 8.022738e-52 | -8.615850e-47 |
| Msa0273360 | Msa0766860 | 0.818765 | 1.652658e-52 | -8.615850e-47 |
| Msa0276800 | Msa0766860 | -0.830270 | 3.228324e-55 | -8.615850e-47 |
| Msa0279090 | Msa0766860 | -0.827868 | 1.233113e-54 | -8.615850e-47 |
| Msa0307430 | Msa0766860 | 0.814798 | 1.282460e-51 | -8.615850e-47 |
| Msa0313620 | Msa0766860 | 0.812095 | 5.038160e-51 | -8.615850e-47 |
| Msa0316720 | Msa0766860 | -0.839773 | 1.296865e-57 | -8.615850e-47 |
| Msa0336430 | Msa0766860 | 0.848639 | 5.392420e-60 | -8.615850e-47 |
| Msa0336460 | Msa0766860 | 0.829421 | 5.196273e-55 | -8.615850e-47 |
| Msa0336520 | Msa0766860 | 0.848375 | 6.379870e-60 | -8.615850e-47 |
| Msa0511600 | Msa0766860 | -0.807318 | 5.360589e-50 | -8.615850e-47 |
| Msa0521060 | Msa0766860 | 0.810216 | 1.287023e-50 | -8.615850e-47 |
| Msa0521320 | Msa0766860 | 0.819722 | 1.000245e-52 | -8.615850e-47 |
| Msa0521510 | Msa0766860 | 0.815990 | 6.964423e-52 | -8.615850e-47 |
| Msa0521530 | Msa0766860 | 0.809096 | 2.239956e-50 | -8.615850e-47 |
| Msa0527850 | Msa0766860 | 0.812007 | 5.263858e-51 | -8.615850e-47 |
| Msa0567570 | Msa0766860 | 0.806188 | 9.285265e-50 | -8.615850e-47 |
| Msa0568460 | Msa0766860 | -0.830521 | 2.802081e-55 | -8.615850e-47 |
| Msa0572270 | Msa0766860 | -0.814305 | 1.648177e-51 | -8.615850e-47 |
| Msa0575960 | Msa0766860 | -0.824388 | 8.291924e-54 | -8.615850e-47 |
| Msa0576330 | Msa0766860 | 0.814833 | 1.259890e-51 | -8.615850e-47 |
| Msa0582460 | Msa0766860 | 0.813497 | 2.484410e-51 | -8.615850e-47 |
| Msa0586200 | Msa0766860 | 0.818711 | 1.699676e-52 | -8.615850e-47 |
PPI
| Gene1 | Gene2 | Type |
|---|
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa0766860 | MtrunA17_Chr5g0418321 | 90.909 | 319 | 14 | 1 | 16 | 334 | 15 | 318 | 0.0 | 583 |
| Msa0766860 | MtrunA17_Chr6g0453931 | 57.362 | 326 | 106 | 4 | 10 | 334 | 23 | 316 | 1.48e-124 | 360 |
| Msa0766860 | MtrunA17_Chr1g0150241 | 47.710 | 262 | 120 | 4 | 74 | 334 | 9 | 254 | 1.26e-81 | 248 |
| Msa0766860 | MtrunA17_Chr3g0136921 | 55.963 | 109 | 45 | 2 | 226 | 334 | 2 | 107 | 2.29e-32 | 116 |
| Msa0766860 | MtrunA17_Chr8g0357321 | 51.250 | 80 | 28 | 1 | 255 | 334 | 3 | 71 | 1.25e-19 | 81.6 |
| Msa0766860 | MtrunA17_Chr3g0136931 | 38.043 | 92 | 55 | 2 | 74 | 164 | 32 | 122 | 6.04e-14 | 68.2 |
| Msa0766860 | MtrunA17_Chr8g0357451 | 50.000 | 54 | 27 | 0 | 251 | 304 | 14 | 67 | 3.72e-11 | 58.2 |
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa0766860 | AT1G69370.1 | 67.766 | 273 | 72 | 2 | 63 | 334 | 59 | 316 | 1.05e-132 | 380 |
| Msa0766860 | AT3G29200.1 | 55.821 | 335 | 122 | 5 | 10 | 334 | 22 | 340 | 1.00e-126 | 366 |
| Msa0766860 | AT5G10870.1 | 50.562 | 267 | 115 | 3 | 70 | 334 | 14 | 265 | 7.57e-87 | 262 |
Find 76 sgRNAs with CRISPR-Local
Find 317 sgRNAs with CRISPR-GE
CRISPR-Local
| sgRNA_sequence | on_target_score | Position | Region |
|---|---|---|---|
| AATGCTTACTTTCACTTTAA+TGG | 0.168974 | 5_2:+29267818 | None:intergenic |
| GGTTTGATTGGCAATCTTTA+TGG | 0.174323 | 5_2:-29267562 | Msa0766860:CDS |
| TAGCATAATATTCAATCTTT+TGG | 0.217061 | 5_2:-29269720 | Msa0766860:CDS |
| CTTCTTCTTCCTTTCAATTC+AGG | 0.220311 | 5_2:-29271736 | Msa0766860:intron |
| TGGCTCTTTGGTTGAATATA+TGG | 0.255007 | 5_2:-29269633 | Msa0766860:CDS |
| GCAAGATGATTTAGGATGTT+TGG | 0.262095 | 5_2:-29267275 | Msa0766860:three_prime_UTR |
| CAAGATGATTTAGGATGTTT+GGG | 0.272304 | 5_2:-29267274 | Msa0766860:three_prime_UTR |
| GTTATGTATACAAGAGAAAA+TGG | 0.301347 | 5_2:+29268409 | None:intergenic |
| CTGTGACACTCTTTGCTTGC+AGG | 0.316286 | 5_2:-29268261 | Msa0766860:intron |
| TCAATCTAAACAATATGATT+TGG | 0.330892 | 5_2:-29268358 | Msa0766860:CDS |
| TTTGTGATTTAGCGAAAATA+AGG | 0.345269 | 5_2:-29267209 | Msa0766860:three_prime_UTR |
| TAAGAATCTCCTTCCAAGAT+TGG | 0.348931 | 5_2:-29268324 | Msa0766860:CDS |
| GACTTTCTGCAAGATGATTT+AGG | 0.349680 | 5_2:-29267283 | Msa0766860:three_prime_UTR |
| AAAATCAAGTCAGGTTTGAT+TGG | 0.354826 | 5_2:-29267574 | Msa0766860:CDS |
| CAAAACCTGTGGGTACTTCA+TGG | 0.359840 | 5_2:+29269422 | None:intergenic |
| ATTGTTTAGATTGATTGAAT+TGG | 0.370604 | 5_2:+29268367 | None:intergenic |
| GGGAAGAAAGCATGCTCATC+CGG | 0.371457 | 5_2:+29269474 | None:intergenic |
| TTGATATCTTTCGTTATTTG+AGG | 0.383756 | 5_2:-29267247 | Msa0766860:three_prime_UTR |
| GCATCAGACACTCTTTGATT+AGG | 0.407192 | 5_2:-29269751 | Msa0766860:CDS |
| TGTGTGGAGGAGAATGATTA+AGG | 0.415368 | 5_2:-29267342 | Msa0766860:three_prime_UTR |
| TTGGCAATCTTTATGGTGAA+TGG | 0.422641 | 5_2:-29267555 | Msa0766860:CDS |
| TTTAATCAAGTCTTCGCAAC+AGG | 0.425055 | 5_2:+29267497 | None:intergenic |
| CTCTCAAAGAGAATCCACTA+TGG | 0.434884 | 5_2:-29267894 | Msa0766860:CDS |
| AGTGGCTCAGGTAAGTTTGT+AGG | 0.444233 | 5_2:+29269453 | None:intergenic |
| ACATTCGAAGTGGGTTTAGT+TGG | 0.447381 | 5_2:+29271839 | None:intergenic |
| ACAGGACAGGAAACGGCTAC+TGG | 0.470469 | 5_2:-29267716 | Msa0766860:intron |
| TTCTCCTCCACACAAGAAAC+AGG | 0.472132 | 5_2:+29267351 | None:intergenic |
| TTGAAAGGAAGAAGAAGAGT+GGG | 0.482641 | 5_2:+29271742 | None:intergenic |
| CCTGTATATAAAATCAAGTC+AGG | 0.484671 | 5_2:-29267583 | Msa0766860:CDS |
| ATGGGAGGAAGCAGTGGCTC+AGG | 0.493888 | 5_2:+29269441 | None:intergenic |
| TTCACCTGTTTCTTGTGTGG+AGG | 0.494284 | 5_2:-29267355 | Msa0766860:three_prime_UTR |
| CAGACACTCTTTGATTAGGC+AGG | 0.494601 | 5_2:-29269747 | Msa0766860:CDS |
| GTGGCTCAGGTAAGTTTGTA+GGG | 0.497372 | 5_2:+29269454 | None:intergenic |
| CTTGATTAAACAGAAGAAGA+TGG | 0.498674 | 5_2:-29267484 | Msa0766860:exon |
| TTGGTAAAAGCAGGAGATGA+TGG | 0.500955 | 5_2:-29268305 | Msa0766860:CDS |
| AGAATGCCCTTCTGTATATG+AGG | 0.503112 | 5_2:-29267844 | Msa0766860:CDS |
| GACAAAGCGTTCTTCTCAGA+TGG | 0.504962 | 5_2:-29269662 | Msa0766860:CDS |
| AAAGGAAGAAGAAGAGTGGG+AGG | 0.517607 | 5_2:+29271745 | None:intergenic |
| ATGATTCACAGGACAGGAAA+CGG | 0.519147 | 5_2:-29267723 | Msa0766860:intron |
| GAAGTAGCTTGAAGTTGAAG+AGG | 0.519486 | 5_2:+29271767 | None:intergenic |
| AAAACCTGTGGGTACTTCAT+GGG | 0.520958 | 5_2:+29269423 | None:intergenic |
| ACCTGCACTTCTTTCGTGAG+AGG | 0.526046 | 5_2:+29267526 | None:intergenic |
| GCCTCTCACGAAAGAAGTGC+AGG | 0.528449 | 5_2:-29267527 | Msa0766860:CDS |
| ATTGAAAGGAAGAAGAAGAG+TGG | 0.531590 | 5_2:+29271741 | None:intergenic |
| GCAGAAGAGAGTAGAAATGA+AGG | 0.532582 | 5_2:-29267659 | Msa0766860:CDS |
| CTTCCAAGATTGGTAAAAGC+AGG | 0.534609 | 5_2:-29268314 | Msa0766860:CDS |
| CTATGGAAAATTTGTTGCTG+AGG | 0.538176 | 5_2:-29267877 | Msa0766860:CDS |
| TGGCACAGTGATGCAGAACC+TGG | 0.541921 | 5_2:+29268387 | None:intergenic |
| AACTGAAAAGCTTCATGCAC+AGG | 0.552581 | 5_2:-29269603 | Msa0766860:intron |
| AAACAAGAGTGGATGAAAGT+AGG | 0.554721 | 5_2:-29269790 | Msa0766860:CDS |
| GGCAAGAACATTTAGTCAAG+TGG | 0.554752 | 5_2:-29267638 | Msa0766860:CDS |
| TACTTCATGGGAGGAAGCAG+TGG | 0.556908 | 5_2:+29269435 | None:intergenic |
| AAGTAGCTTGAAGTTGAAGA+GGG | 0.559431 | 5_2:+29271768 | None:intergenic |
| GTGTGGAGGAGAATGATTAA+GGG | 0.562011 | 5_2:-29267341 | Msa0766860:three_prime_UTR |
| GTGGTAAAGATCAATGAAGC+AGG | 0.562259 | 5_2:-29267619 | Msa0766860:CDS |
| GGAAGAAAGCATGCTCATCC+GGG | 0.562268 | 5_2:+29269475 | None:intergenic |
| TCCTCCCATGAAGTACCCAC+AGG | 0.566296 | 5_2:-29269427 | Msa0766860:intron |
| TGCAAGTACTCAAGAACTCT+AGG | 0.568115 | 5_2:-29267391 | Msa0766860:three_prime_UTR |
| TTTCTCTTGTATACATAACC+AGG | 0.573782 | 5_2:-29268405 | Msa0766860:CDS |
| TTGGAAGGAACATTCGAAGT+GGG | 0.577997 | 5_2:+29271830 | None:intergenic |
| TGTATACAAGAGAAAATGGA+AGG | 0.591859 | 5_2:+29268413 | None:intergenic |
| ATGGCAGCCTCATATACAGA+AGG | 0.592543 | 5_2:+29267837 | None:intergenic |
| CTGTCGTAAAACGTCAAACA+AGG | 0.599490 | 5_2:-29271923 | Msa0766860:five_prime_UTR |
| GGAGTTGTTGACATATGAAT+CGG | 0.608241 | 5_2:-29267695 | Msa0766860:CDS |
| GGTGGGAAGATATACGAGCC+CGG | 0.615212 | 5_2:-29269493 | Msa0766860:CDS |
| ACCTGTGGGTACTTCATGGG+AGG | 0.630361 | 5_2:+29269426 | None:intergenic |
| GTTGACATATGAATCGGTGG+AGG | 0.643053 | 5_2:-29267689 | Msa0766860:CDS |
| ACATTTAGGTAAAACAAGAG+TGG | 0.643672 | 5_2:-29269801 | Msa0766860:CDS |
| TGGCAGCCTCATATACAGAA+GGG | 0.649292 | 5_2:+29267838 | None:intergenic |
| CGTCAAACAAGGTAGTACAA+TGG | 0.652083 | 5_2:-29271912 | Msa0766860:exon |
| AAGATGATTTAGGATGTTTG+GGG | 0.654698 | 5_2:-29267273 | Msa0766860:three_prime_UTR |
| GCAGGAGATGATGGTAACAG+TGG | 0.655534 | 5_2:-29268296 | Msa0766860:CDS |
| TTTGGAAGGAACATTCGAAG+TGG | 0.656260 | 5_2:+29271829 | None:intergenic |
| GGTGGTGTACCTGAATTGAA+AGG | 0.681972 | 5_2:+29271727 | None:intergenic |
| TGGTAACAGTGGATCAGCTG+CGG | 0.692102 | 5_2:-29268285 | Msa0766860:CDS |
| GTTGTTGACATATGAATCGG+TGG | 0.699672 | 5_2:-29267692 | Msa0766860:CDS |
CRISPR-GE
| badsite warning | sgRNA_sequence | Strand | Position | Region | GC_content |
|---|---|---|---|---|---|
| !! | TTGTTATAAAAAACAATAAA+GGG | + | chr5_2:29267438-29267457 | None:intergenic | 10.0% |
| !! | AATAAAGAATAAAAATGAAA+TGG | + | chr5_2:29267461-29267480 | None:intergenic | 10.0% |
| !!! | TTTTCTATACTTATATATAA+AGG | - | chr5_2:29269061-29269080 | Msa0766860:intron | 10.0% |
| !! | TTTCTATACTTATATATAAA+GGG | - | chr5_2:29269062-29269081 | Msa0766860:intron | 10.0% |
| !! | GATATATTATTACTATTATA+CGG | - | chr5_2:29271163-29271182 | Msa0766860:intron | 10.0% |
| !! | TTATAATTTATAACAAAACA+CGG | + | chr5_2:29271212-29271231 | None:intergenic | 10.0% |
| !! | TTATAAATTATAATCATTAC+AGG | - | chr5_2:29271219-29271238 | Msa0766860:intron | 10.0% |
| !! | GTTGTTATAAAAAACAATAA+AGG | + | chr5_2:29267439-29267458 | None:intergenic | 15.0% |
| !! | CAAGTATTAAAATAATAAGA+AGG | - | chr5_2:29268079-29268098 | Msa0766860:intron | 15.0% |
| !! | AAATGAAAATTACAATAGTA+GGG | - | chr5_2:29268704-29268723 | Msa0766860:intron | 15.0% |
| !!! | ATAAAGGGAATATTAATTTT+TGG | - | chr5_2:29269077-29269096 | Msa0766860:intron | 15.0% |
| !! | ATAGTAATATAAATCTTAGA+CGG | - | chr5_2:29269235-29269254 | Msa0766860:intron | 15.0% |
| !! | AATTAATATAGTCTACAAAA+AGG | + | chr5_2:29269807-29269826 | None:intergenic | 15.0% |
| !! | AAGAGATAATGATAATATAA+TGG | + | chr5_2:29270553-29270572 | None:intergenic | 15.0% |
| !! | TTATAAAAAACAATAAAGGG+TGG | + | chr5_2:29267435-29267454 | None:intergenic | 20.0% |
| !!! | TGATTGTGTTTTAGTTATAA+AGG | - | chr5_2:29267498-29267517 | Msa0766860:CDS | 20.0% |
| !!! | ATTTCTTTTAAGGTCTTAAT+AGG | - | chr5_2:29268146-29268165 | Msa0766860:intron | 20.0% |
| !! | CAACAATGTTGAATAATATA+GGG | + | chr5_2:29268314-29268333 | None:intergenic | 20.0% |
| !! | GAAATGAAAATTACAATAGT+AGG | - | chr5_2:29268703-29268722 | Msa0766860:intron | 20.0% |
| !! | TTGTTAGAATGATAATATGA+GGG | + | chr5_2:29268814-29268833 | None:intergenic | 20.0% |
| !! | TTTGTTAGAATGATAATATG+AGG | + | chr5_2:29268815-29268834 | None:intergenic | 20.0% |
| !! | GTTTAAATAAAGGTTAAAAG+TGG | + | chr5_2:29268995-29269014 | None:intergenic | 20.0% |
| !! | GAAAATTCAATTATTTGACT+GGG | + | chr5_2:29269046-29269065 | None:intergenic | 20.0% |
| !! | AGAAAATTCAATTATTTGAC+TGG | + | chr5_2:29269047-29269066 | None:intergenic | 20.0% |
| !! | ACAGGATTGTAAATAAAATA+GGG | + | chr5_2:29269107-29269126 | None:intergenic | 20.0% |
| !!! | TAGCATAATATTCAATCTTT+TGG | - | chr5_2:29269418-29269437 | Msa0766860:intron | 20.0% |
| !!! | TTTTTTAGGCAATGAAAATA+TGG | - | chr5_2:29269566-29269585 | Msa0766860:intron | 20.0% |
| !!! | AATTTTATGAGTACTTTCAT+CGG | - | chr5_2:29270424-29270443 | Msa0766860:intron | 20.0% |
| !! | TGAAATTACATGTTATAAAG+TGG | + | chr5_2:29270529-29270548 | None:intergenic | 20.0% |
| !! | ATTGTTTAGATTGATTGAAT+TGG | + | chr5_2:29270774-29270793 | None:intergenic | 20.0% |
| !! | TCAATCTAAACAATATGATT+TGG | - | chr5_2:29270780-29270799 | Msa0766860:intron | 20.0% |
| !!! | TTATCATTTTCAACAAAGTT+AGG | - | chr5_2:29270934-29270953 | Msa0766860:intron | 20.0% |
| !! | CTACAAAATTTATCTTGATA+TGG | - | chr5_2:29271386-29271405 | Msa0766860:intron | 20.0% |
| !!! | GTGTTATTTTTCTTGTTTGT+TGG | - | chr5_2:29267520-29267539 | Msa0766860:CDS | 25.0% |
| !!! | TATTTTTCTTGTTTGTTGGT+TGG | - | chr5_2:29267524-29267543 | Msa0766860:CDS | 25.0% |
| ! | TCCAATCAAATTGTATACAA+TGG | - | chr5_2:29267761-29267780 | Msa0766860:intron | 25.0% |
| !!! | CAATGGCTTTTTTTTTGAAA+CGG | + | chr5_2:29267871-29267890 | None:intergenic | 25.0% |
| !!! | AGTTTTTTACAAAACCATGA+TGG | + | chr5_2:29267983-29268002 | None:intergenic | 25.0% |
| !! | ACCAACAAGAATTTCTTTTA+AGG | - | chr5_2:29268136-29268155 | Msa0766860:intron | 25.0% |
| ! | ACCTTAAAAGAAATTCTTGT+TGG | + | chr5_2:29268140-29268159 | None:intergenic | 25.0% |
| ! | GGAAGAAGTTATTAGAATTT+AGG | - | chr5_2:29268167-29268186 | Msa0766860:intron | 25.0% |
| ! | GAAGTTATTAGAATTTAGGT+TGG | - | chr5_2:29268171-29268190 | Msa0766860:intron | 25.0% |
| ! | CCAACAATGTTGAATAATAT+AGG | + | chr5_2:29268315-29268334 | None:intergenic | 25.0% |
| ! | CCTATATTATTCAACATTGT+TGG | - | chr5_2:29268312-29268331 | Msa0766860:CDS | 25.0% |
| ! | AATCACAAACTATATAGCAA+AGG | + | chr5_2:29268544-29268563 | None:intergenic | 25.0% |
| ! | TTGAAATTTAAGTCTCTCTA+TGG | - | chr5_2:29268593-29268612 | Msa0766860:intron | 25.0% |
| ! | TGTTAGAATGATAATATGAG+GGG | + | chr5_2:29268813-29268832 | None:intergenic | 25.0% |
| ! | CAGGATTGTAAATAAAATAG+GGG | + | chr5_2:29269106-29269125 | None:intergenic | 25.0% |
| ! | GACAGGATTGTAAATAAAAT+AGG | + | chr5_2:29269108-29269127 | None:intergenic | 25.0% |
| ! | GATAAAATTTCAAAACCTGT+GGG | + | chr5_2:29269729-29269748 | None:intergenic | 25.0% |
| ! | AGATAAAATTTCAAAACCTG+TGG | + | chr5_2:29269730-29269749 | None:intergenic | 25.0% |
| !!! | TTCTCTTATTTTGACAAGTT+TGG | - | chr5_2:29269846-29269865 | Msa0766860:intron | 25.0% |
| !! | GAAAATGGTTTTTAACCTTT+TGG | - | chr5_2:29269882-29269901 | Msa0766860:intron | 25.0% |
| ! | GTAATAGTAGATGATGAATA+TGG | - | chr5_2:29269938-29269957 | Msa0766860:intron | 25.0% |
| !! | TACCAACTTCTGTTTAAAAT+GGG | - | chr5_2:29269999-29270018 | Msa0766860:intron | 25.0% |
| ! | TCTTGAGCATTATAATAGAA+GGG | + | chr5_2:29270038-29270057 | None:intergenic | 25.0% |
| ! | AAGAGGAATTCAAATTTACT+TGG | - | chr5_2:29270054-29270073 | Msa0766860:intron | 25.0% |
| !! | AATCCGTCTTTTGTATATTA+TGG | - | chr5_2:29270220-29270239 | Msa0766860:intron | 25.0% |
| ! | TCTCCATAATATACAAAAGA+CGG | + | chr5_2:29270226-29270245 | None:intergenic | 25.0% |
| ! | AAAAGGTCAATAAGATAATC+TGG | + | chr5_2:29270252-29270271 | None:intergenic | 25.0% |
| ! | CATATGACTAGTGTAATAAA+AGG | + | chr5_2:29270269-29270288 | None:intergenic | 25.0% |
| !! | GTGTGATCTACAATTAATTT+TGG | + | chr5_2:29270331-29270350 | None:intergenic | 25.0% |
| ! | GTACTCATAAAATTCTTAGT+AGG | + | chr5_2:29270418-29270437 | None:intergenic | 25.0% |
| !! | TTTTGCAATATTTTGCTGAT+AGG | - | chr5_2:29270688-29270707 | Msa0766860:intron | 25.0% |
| ! | GTTATGTATACAAGAGAAAA+TGG | + | chr5_2:29270732-29270751 | None:intergenic | 25.0% |
| ! | TAAAATATGTACTGTAACAC+TGG | + | chr5_2:29270917-29270936 | None:intergenic | 25.0% |
| ! | AGTACTCAAAATGTCAATAT+AGG | + | chr5_2:29271046-29271065 | None:intergenic | 25.0% |
| ! | ATAATCTCATGCAAAGTAAA+AGG | + | chr5_2:29271084-29271103 | None:intergenic | 25.0% |
| ! | AATGCTTACTTTCACTTTAA+TGG | + | chr5_2:29271323-29271342 | None:intergenic | 25.0% |
| !! | TTTTGTAGTGTCACAATATA+AGG | + | chr5_2:29271374-29271393 | None:intergenic | 25.0% |
| ! | TTGATATCTTTCGTTATTTG+AGG | - | chr5_2:29271891-29271910 | Msa0766860:CDS | 25.0% |
| ! | TTTGTGATTTAGCGAAAATA+AGG | - | chr5_2:29271929-29271948 | Msa0766860:five_prime_UTR | 25.0% |
| TAAAAAACAATAAAGGGTGG+TGG | + | chr5_2:29267432-29267451 | None:intergenic | 30.0% | |
| GTCTACATGAATGAATGTTA+TGG | - | chr5_2:29267608-29267627 | Msa0766860:CDS | 30.0% | |
| AATATCAAATGAGCACACTT+AGG | + | chr5_2:29267672-29267691 | None:intergenic | 30.0% | |
| TAAGTGTGCTCATTTGATAT+TGG | - | chr5_2:29267671-29267690 | Msa0766860:CDS | 30.0% | |
| !!! | TATTGGTGATGCATTTTGTT+TGG | - | chr5_2:29267688-29267707 | Msa0766860:CDS | 30.0% |
| TGGAATTGAATTTACTGTTC+TGG | - | chr5_2:29267713-29267732 | Msa0766860:CDS | 30.0% | |
| GCCATTGTATACAATTTGAT+TGG | + | chr5_2:29267765-29267784 | None:intergenic | 30.0% | |
| AACTTACTGTATGTTTGGAT+TGG | + | chr5_2:29268056-29268075 | None:intergenic | 30.0% | |
| AAGACTTAAGTGTTTCACAT+TGG | + | chr5_2:29268274-29268293 | None:intergenic | 30.0% | |
| ATAACTAGCATTTGTAGCAT+TGG | - | chr5_2:29268420-29268439 | Msa0766860:CDS | 30.0% | |
| ! | TTTTCCTTTCTCATACCAAA+AGG | + | chr5_2:29268478-29268497 | None:intergenic | 30.0% |
| ! | TGAAAACAATTAGAGAGCAT+TGG | + | chr5_2:29268520-29268539 | None:intergenic | 30.0% |
| TCTCCTCGATTACAAAAAAT+GGG | - | chr5_2:29268654-29268673 | Msa0766860:intron | 30.0% | |
| !!! | AATCCCATTTTTTGTAATCG+AGG | + | chr5_2:29268660-29268679 | None:intergenic | 30.0% |
| CGATTACAAAAAATGGGATT+TGG | - | chr5_2:29268660-29268679 | Msa0766860:intron | 30.0% | |
| !! | ATTTCCGATTCTTGCTATTT+AGG | + | chr5_2:29268688-29268707 | None:intergenic | 30.0% |
| GAAAATTACAATAGTAGGGA+TGG | - | chr5_2:29268708-29268727 | Msa0766860:intron | 30.0% | |
| AATAATTCAGTAGCAACAGT+GGG | + | chr5_2:29268769-29268788 | None:intergenic | 30.0% | |
| AAATAATTCAGTAGCAACAG+TGG | + | chr5_2:29268770-29268789 | None:intergenic | 30.0% | |
| !! | AGTTATGCTCTAGAATAAAC+AGG | - | chr5_2:29268888-29268907 | Msa0766860:intron | 30.0% |
| !!! | CTTTTTTTCCTTCTCAGATT+GGG | + | chr5_2:29269136-29269155 | None:intergenic | 30.0% |
| !! | TAACTTCTAAGGTTTAACCA+TGG | - | chr5_2:29269258-29269277 | Msa0766860:intron | 30.0% |
| ! | CAATATCTGACAGTTTCTTT+TGG | - | chr5_2:29269309-29269328 | Msa0766860:intron | 30.0% |
| ACATTTAGGTAAAACAAGAG+TGG | - | chr5_2:29269337-29269356 | Msa0766860:intron | 30.0% | |
| !!! | CACAGGTTGTTACATTTTTT+AGG | - | chr5_2:29269552-29269571 | Msa0766860:intron | 30.0% |
| GTGATTAAAATTTGTGTGCT+TGG | - | chr5_2:29269605-29269624 | Msa0766860:CDS | 30.0% | |
| ! | TTGGCTTCCCTTTTTAAATT+AGG | - | chr5_2:29269624-29269643 | Msa0766860:CDS | 30.0% |
| ! | CTTCCCTTTTTAAATTAGGT+GGG | - | chr5_2:29269628-29269647 | Msa0766860:CDS | 30.0% |
| CTTCCCACCTAATTTAAAAA+GGG | + | chr5_2:29269634-29269653 | None:intergenic | 30.0% | |
| TCTTCCCACCTAATTTAAAA+AGG | + | chr5_2:29269635-29269654 | None:intergenic | 30.0% | |
| CTACCAACTTCTGTTTAAAA+TGG | - | chr5_2:29269998-29270017 | Msa0766860:intron | 30.0% | |
| ! | ACCAACTTCTGTTTAAAATG+GGG | - | chr5_2:29270000-29270019 | Msa0766860:intron | 30.0% |
| CTCTTGAGCATTATAATAGA+AGG | + | chr5_2:29270039-29270058 | None:intergenic | 30.0% | |
| CTTCTATTATAATGCTCAAG+AGG | - | chr5_2:29270037-29270056 | Msa0766860:intron | 30.0% | |
| TGTATACAAGAGAAAATGGA+AGG | + | chr5_2:29270728-29270747 | None:intergenic | 30.0% | |
| TTTCTCTTGTATACATAACC+AGG | - | chr5_2:29270733-29270752 | Msa0766860:intron | 30.0% | |
| TCAATATAGGCAAAGAAATG+AGG | + | chr5_2:29271033-29271052 | None:intergenic | 30.0% | |
| !! | GATTTTGTGTATTAGCTTGA+AGG | + | chr5_2:29271143-29271162 | None:intergenic | 30.0% |
| AGTGAAAGTAAGCATTTACT+TGG | - | chr5_2:29271327-29271346 | Msa0766860:intron | 30.0% | |
| !! | CCTGACTTGATTTTATATAC+AGG | + | chr5_2:29271558-29271577 | None:intergenic | 30.0% |
| CCTGTATATAAAATCAAGTC+AGG | - | chr5_2:29271555-29271574 | Msa0766860:intron | 30.0% | |
| AAAATCAAGTCAGGTTTGAT+TGG | - | chr5_2:29271564-29271583 | Msa0766860:intron | 30.0% | |
| CTTGATTAAACAGAAGAAGA+TGG | - | chr5_2:29271654-29271673 | Msa0766860:intron | 30.0% | |
| ! | CAAGATGATTTAGGATGTTT+GGG | - | chr5_2:29271864-29271883 | Msa0766860:CDS | 30.0% |
| ! | AAGATGATTTAGGATGTTTG+GGG | - | chr5_2:29271865-29271884 | Msa0766860:CDS | 30.0% |
| ! | TTGTTTGACGTTTTACGACA+GGG | + | chr5_2:29267216-29267235 | None:intergenic | 35.0% |
| GAAGAGGGTGAAAAAAATTG+TGG | + | chr5_2:29267358-29267377 | None:intergenic | 35.0% | |
| AAGTAGCTTGAAGTTGAAGA+GGG | + | chr5_2:29267373-29267392 | None:intergenic | 35.0% | |
| TTGAAAGGAAGAAGAAGAGT+GGG | + | chr5_2:29267399-29267418 | None:intergenic | 35.0% | |
| ATTGAAAGGAAGAAGAAGAG+TGG | + | chr5_2:29267400-29267419 | None:intergenic | 35.0% | |
| CTTCTTCTTCCTTTCAATTC+AGG | - | chr5_2:29267402-29267421 | Msa0766860:three_prime_UTR | 35.0% | |
| CATTGTGTAGTTCAGTATTG+TGG | - | chr5_2:29267635-29267654 | Msa0766860:CDS | 35.0% | |
| !!! | TTTTGAAACGGCAAATACAC+CGG | + | chr5_2:29267859-29267878 | None:intergenic | 35.0% |
| CAAAAAAAAAGCCATTGTGC+CGG | - | chr5_2:29267874-29267893 | Msa0766860:CDS | 35.0% | |
| ! | TTACTGTATGTTTGGATTGG+TGG | + | chr5_2:29268053-29268072 | None:intergenic | 35.0% |
| TGTCGAACTTACTGTATGTT+TGG | + | chr5_2:29268061-29268080 | None:intergenic | 35.0% | |
| ACTTAACCTTACAAAACCAC+CGG | - | chr5_2:29268199-29268218 | Msa0766860:intron | 35.0% | |
| AGATGAAGCCTGAACAATAT+AGG | + | chr5_2:29268248-29268267 | None:intergenic | 35.0% | |
| TTGAATAATATAGGGCGTGA+GGG | + | chr5_2:29268306-29268325 | None:intergenic | 35.0% | |
| !!! | CATTTTTTGTAATCGAGGAG+AGG | + | chr5_2:29268655-29268674 | None:intergenic | 35.0% |
| CTCTCCTCGATTACAAAAAA+TGG | - | chr5_2:29268653-29268672 | Msa0766860:intron | 35.0% | |
| GGATCCTAAATAGCAAGAAT+CGG | - | chr5_2:29268681-29268700 | Msa0766860:intron | 35.0% | |
| GAATAAACAGGATTCCCATT+TGG | - | chr5_2:29268900-29268919 | Msa0766860:intron | 35.0% | |
| ACAGCTAAGAAAGACCAAAT+GGG | + | chr5_2:29268917-29268936 | None:intergenic | 35.0% | |
| AAAAGCTTCTATCGCCTTTA+CGG | + | chr5_2:29268954-29268973 | None:intergenic | 35.0% | |
| !!! | CCTTTTTTTCCTTCTCAGAT+TGG | + | chr5_2:29269137-29269156 | None:intergenic | 35.0% |
| CCAATCTGAGAAGGAAAAAA+AGG | - | chr5_2:29269134-29269153 | Msa0766860:intron | 35.0% | |
| ATCTTAGACGGTAACTTCTA+AGG | - | chr5_2:29269247-29269266 | Msa0766860:intron | 35.0% | |
| !! | TTCTTTTGGTGCAGACATTT+AGG | - | chr5_2:29269323-29269342 | Msa0766860:intron | 35.0% |
| AAACAAGAGTGGATGAAAGT+AGG | - | chr5_2:29269348-29269367 | Msa0766860:intron | 35.0% | |
| ! | TTCTTCTCAGATGGTTTTCA+TGG | - | chr5_2:29269485-29269504 | Msa0766860:CDS | 35.0% |
| TGGCTCTTTGGTTGAATATA+TGG | - | chr5_2:29269505-29269524 | Msa0766860:intron | 35.0% | |
| ! | GCTTCCCTTTTTAAATTAGG+TGG | - | chr5_2:29269627-29269646 | Msa0766860:CDS | 35.0% |
| ! | CAAGTTTGGTGAGTAAAGAT+TGG | - | chr5_2:29269860-29269879 | Msa0766860:intron | 35.0% |
| GGTGAGTAAAGATTGGAAAA+TGG | - | chr5_2:29269867-29269886 | Msa0766860:intron | 35.0% | |
| ATGATGAATATGGCGTCTAA+AGG | - | chr5_2:29269948-29269967 | Msa0766860:intron | 35.0% | |
| TGATGAATATGGCGTCTAAA+GGG | - | chr5_2:29269949-29269968 | Msa0766860:intron | 35.0% | |
| ! | CCAACTTCTGTTTAAAATGG+GGG | - | chr5_2:29270001-29270020 | Msa0766860:intron | 35.0% |
| !! | ACTTGGTCTTTTGTAGATTG+AGG | - | chr5_2:29270071-29270090 | Msa0766860:intron | 35.0% |
| TATGACCTATTGACCATTCT+AGG | - | chr5_2:29270485-29270504 | Msa0766860:intron | 35.0% | |
| TAAGAATCTCCTTCCAAGAT+TGG | - | chr5_2:29270814-29270833 | Msa0766860:intron | 35.0% | |
| TGTAACACTGGAAGCTTAAT+AGG | + | chr5_2:29270905-29270924 | None:intergenic | 35.0% | |
| AGTTAGGAGAAATTGATGTG+TGG | - | chr5_2:29270950-29270969 | Msa0766860:intron | 35.0% | |
| ! | CATTTTGTTCCTACACCATA+TGG | + | chr5_2:29271006-29271025 | None:intergenic | 35.0% |
| ! | CAGCAACAAATTTTCCATAG+TGG | + | chr5_2:29271261-29271280 | None:intergenic | 35.0% |
| !! | CTATGGAAAATTTGTTGCTG+AGG | - | chr5_2:29271261-29271280 | Msa0766860:intron | 35.0% |
| TATGGCTTATCATGATTCAC+AGG | - | chr5_2:29271404-29271423 | Msa0766860:intron | 35.0% | |
| GGAGTTGTTGACATATGAAT+CGG | - | chr5_2:29271443-29271462 | Msa0766860:intron | 35.0% | |
| GGTTTGATTGGCAATCTTTA+TGG | - | chr5_2:29271576-29271595 | Msa0766860:intron | 35.0% | |
| TTGGCAATCTTTATGGTGAA+TGG | - | chr5_2:29271583-29271602 | Msa0766860:intron | 35.0% | |
| TTTAATCAAGTCTTCGCAAC+AGG | + | chr5_2:29271644-29271663 | None:intergenic | 35.0% | |
| !! | TTTTTCACCTGTTTCTTGTG+TGG | - | chr5_2:29271780-29271799 | Msa0766860:CDS | 35.0% |
| GACTTTCTGCAAGATGATTT+AGG | - | chr5_2:29271855-29271874 | Msa0766860:CDS | 35.0% | |
| ! | GCAAGATGATTTAGGATGTT+TGG | - | chr5_2:29271863-29271882 | Msa0766860:CDS | 35.0% |
| ! | CTTGTTTGACGTTTTACGAC+AGG | + | chr5_2:29267217-29267236 | None:intergenic | 40.0% |
| CTGTCGTAAAACGTCAAACA+AGG | - | chr5_2:29267215-29267234 | Msa0766860:three_prime_UTR | 40.0% | |
| CGTCAAACAAGGTAGTACAA+TGG | - | chr5_2:29267226-29267245 | Msa0766860:three_prime_UTR | 40.0% | |
| ! | ACATTCGAAGTGGGTTTAGT+TGG | + | chr5_2:29267302-29267321 | None:intergenic | 40.0% |
| TTGGAAGGAACATTCGAAGT+GGG | + | chr5_2:29267311-29267330 | None:intergenic | 40.0% | |
| TTTGGAAGGAACATTCGAAG+TGG | + | chr5_2:29267312-29267331 | None:intergenic | 40.0% | |
| AGAAAAATGGTGCGTTTGGA+AGG | + | chr5_2:29267326-29267345 | None:intergenic | 40.0% | |
| ACGAAGAAAAATGGTGCGTT+TGG | + | chr5_2:29267330-29267349 | None:intergenic | 40.0% | |
| GTGGTGGTTACGAAGAAAAA+TGG | + | chr5_2:29267339-29267358 | None:intergenic | 40.0% | |
| GAGGGTGAAAAAAATTGTGG+TGG | + | chr5_2:29267355-29267374 | None:intergenic | 40.0% | |
| GAAGTAGCTTGAAGTTGAAG+AGG | + | chr5_2:29267374-29267393 | None:intergenic | 40.0% | |
| ! | GTTTGTTGGTTGGTCAAAAG+TGG | - | chr5_2:29267534-29267553 | Msa0766860:CDS | 40.0% |
| !! | GTGATGCATTTTGTTTGGTG+TGG | - | chr5_2:29267693-29267712 | Msa0766860:CDS | 40.0% |
| CTGTTTGATGTAAGTGCAGT+TGG | - | chr5_2:29267795-29267814 | Msa0766860:intron | 40.0% | |
| ! | TAGATCCAATAGCTTTGCAC+CGG | + | chr5_2:29267896-29267915 | None:intergenic | 40.0% |
| ! | ACTGCATTGATGTACGTGTT+TGG | - | chr5_2:29267925-29267944 | Msa0766860:intron | 40.0% |
| AGAATCACAGTAAGCCATCA+TGG | - | chr5_2:29267966-29267985 | Msa0766860:intron | 40.0% | |
| AAGCCTGAACAATATAGGTG+GGG | + | chr5_2:29268243-29268262 | None:intergenic | 40.0% | |
| GAAGCCTGAACAATATAGGT+GGG | + | chr5_2:29268244-29268263 | None:intergenic | 40.0% | |
| TGAAGCCTGAACAATATAGG+TGG | + | chr5_2:29268245-29268264 | None:intergenic | 40.0% | |
| TGAATAATATAGGGCGTGAG+GGG | + | chr5_2:29268305-29268324 | None:intergenic | 40.0% | |
| GTTGAATAATATAGGGCGTG+AGG | + | chr5_2:29268307-29268326 | None:intergenic | 40.0% | |
| TGTACACAGGGATACATAAC+TGG | + | chr5_2:29268372-29268391 | None:intergenic | 40.0% | |
| TTGACAGATAGGTGTACACA+GGG | + | chr5_2:29268384-29268403 | None:intergenic | 40.0% | |
| AGCAAGTATGCTTGACAGAT+AGG | + | chr5_2:29268395-29268414 | None:intergenic | 40.0% | |
| TTTCTCATACCAAAAGGCTC+TGG | + | chr5_2:29268472-29268491 | None:intergenic | 40.0% | |
| ! | AGAGCCTTTTGGTATGAGAA+AGG | - | chr5_2:29268471-29268490 | Msa0766860:intron | 40.0% |
| CAATAGTAGGGATGGAACTA+TGG | - | chr5_2:29268716-29268735 | Msa0766860:intron | 40.0% | |
| ACTTGAGTGCAGAGATAGTA+GGG | + | chr5_2:29268871-29268890 | None:intergenic | 40.0% | |
| AACTTGAGTGCAGAGATAGT+AGG | + | chr5_2:29268872-29268891 | None:intergenic | 40.0% | |
| CACAGCTAAGAAAGACCAAA+TGG | + | chr5_2:29268918-29268937 | None:intergenic | 40.0% | |
| ! | GTGTGTTGATCAATCCGTAA+AGG | - | chr5_2:29268937-29268956 | Msa0766860:intron | 40.0% |
| ! | GTAAAGGCGATAGAAGCTTT+TGG | - | chr5_2:29268953-29268972 | Msa0766860:intron | 40.0% |
| TTCCTTCTCAGATTGGGTAA+AGG | + | chr5_2:29269130-29269149 | None:intergenic | 40.0% | |
| AAGAGACCAAAAAACGCAGA+AGG | - | chr5_2:29269172-29269191 | Msa0766860:intron | 40.0% | |
| AGAGACCAAAAAACGCAGAA+GGG | - | chr5_2:29269173-29269192 | Msa0766860:intron | 40.0% | |
| ACGATAAACTAGCGTGCATA+CGG | + | chr5_2:29269214-29269233 | None:intergenic | 40.0% | |
| CAGATATTGATCCAGAAGCT+TGG | + | chr5_2:29269298-29269317 | None:intergenic | 40.0% | |
| GCATCAGACACTCTTTGATT+AGG | - | chr5_2:29269387-29269406 | Msa0766860:intron | 40.0% | |
| ! | AGATGGTTTTCATGGCTCTT+TGG | - | chr5_2:29269493-29269512 | Msa0766860:CDS | 40.0% |
| ! | CATGAAGCTTTTCAGTTTCG+TGG | + | chr5_2:29269532-29269551 | None:intergenic | 40.0% |
| AACTGAAAAGCTTCATGCAC+AGG | - | chr5_2:29269535-29269554 | Msa0766860:intron | 40.0% | |
| AAAACCTGTGGGTACTTCAT+GGG | + | chr5_2:29269718-29269737 | None:intergenic | 40.0% | |
| ! | AACCTTTTGGTGAGAATGAG+AGG | - | chr5_2:29269895-29269914 | Msa0766860:intron | 40.0% |
| GAGAGGCTGATTGTAACATT+TGG | - | chr5_2:29269912-29269931 | Msa0766860:intron | 40.0% | |
| ! | CCCCCATTTTAAACAGAAGT+TGG | + | chr5_2:29270004-29270023 | None:intergenic | 40.0% |
| !! | CTGAAAGTGTCTAATACGAG+AGG | + | chr5_2:29270098-29270117 | None:intergenic | 40.0% |
| CTCGTATTAGACACTTTCAG+TGG | - | chr5_2:29270098-29270117 | Msa0766860:intron | 40.0% | |
| TTAGACACTTTCAGTGGAAC+AGG | - | chr5_2:29270104-29270123 | Msa0766860:intron | 40.0% | |
| TAGACACTTTCAGTGGAACA+GGG | - | chr5_2:29270105-29270124 | Msa0766860:intron | 40.0% | |
| GGAACAGGGATAGGAAAAAA+AGG | - | chr5_2:29270119-29270138 | Msa0766860:intron | 40.0% | |
| TCAAAATCTCGTTCTCCTAC+TGG | - | chr5_2:29270171-29270190 | Msa0766860:intron | 40.0% | |
| ACTGCATCTGCAATTTATGC+TGG | + | chr5_2:29270381-29270400 | None:intergenic | 40.0% | |
| CTTGACCTAGAATGGTCAAT+AGG | + | chr5_2:29270493-29270512 | None:intergenic | 40.0% | |
| TATAAAGTGGCTACTGCATG+TGG | + | chr5_2:29270516-29270535 | None:intergenic | 40.0% | |
| AGTTGAACGAAGTAGGAACT+AGG | + | chr5_2:29270618-29270637 | None:intergenic | 40.0% | |
| CCAATTCAGTTGAACGAAGT+AGG | + | chr5_2:29270625-29270644 | None:intergenic | 40.0% | |
| CCTACTTCGTTCAACTGAAT+TGG | - | chr5_2:29270622-29270641 | Msa0766860:intron | 40.0% | |
| !! | CTGCTTTTACCAATCTTGGA+AGG | + | chr5_2:29270826-29270845 | None:intergenic | 40.0% |
| CTTCCAAGATTGGTAAAAGC+AGG | - | chr5_2:29270824-29270843 | Msa0766860:intron | 40.0% | |
| !! | TCTCCTGCTTTTACCAATCT+TGG | + | chr5_2:29270830-29270849 | None:intergenic | 40.0% |
| TTGGTAAAAGCAGGAGATGA+TGG | - | chr5_2:29270833-29270852 | Msa0766860:intron | 40.0% | |
| CTCTCAAAGAGAATCCACTA+TGG | - | chr5_2:29271244-29271263 | Msa0766860:intron | 40.0% | |
| AGAATGCCCTTCTGTATATG+AGG | - | chr5_2:29271294-29271313 | Msa0766860:intron | 40.0% | |
| GTGTCACAATATAAGGACGA+AGG | + | chr5_2:29271367-29271386 | None:intergenic | 40.0% | |
| CTTATCATGATTCACAGGAC+AGG | - | chr5_2:29271409-29271428 | Msa0766860:intron | 40.0% | |
| ATGATTCACAGGACAGGAAA+CGG | - | chr5_2:29271415-29271434 | Msa0766860:intron | 40.0% | |
| GTTGTTGACATATGAATCGG+TGG | - | chr5_2:29271446-29271465 | Msa0766860:intron | 40.0% | |
| GCAGAAGAGAGTAGAAATGA+AGG | - | chr5_2:29271479-29271498 | Msa0766860:intron | 40.0% | |
| GGCAAGAACATTTAGTCAAG+TGG | - | chr5_2:29271500-29271519 | Msa0766860:intron | 40.0% | |
| GTGGTAAAGATCAATGAAGC+AGG | - | chr5_2:29271519-29271538 | Msa0766860:intron | 40.0% | |
| TGCAAGTACTCAAGAACTCT+AGG | - | chr5_2:29271747-29271766 | Msa0766860:CDS | 40.0% | |
| TGTGTGGAGGAGAATGATTA+AGG | - | chr5_2:29271796-29271815 | Msa0766860:CDS | 40.0% | |
| GTGTGGAGGAGAATGATTAA+GGG | - | chr5_2:29271797-29271816 | Msa0766860:CDS | 40.0% | |
| AAAGGAAGAAGAAGAGTGGG+AGG | + | chr5_2:29267396-29267415 | None:intergenic | 45.0% | |
| GGTGGTGTACCTGAATTGAA+AGG | + | chr5_2:29267414-29267433 | None:intergenic | 45.0% | |
| ! | TGGTTGGTCAAAAGTGGTAG+TGG | - | chr5_2:29267540-29267559 | Msa0766860:CDS | 45.0% |
| TTGCTGACGTGGACAACATT+AGG | + | chr5_2:29267583-29267602 | None:intergenic | 45.0% | |
| GTAGACATACATTGCTGACG+TGG | + | chr5_2:29267594-29267613 | None:intergenic | 45.0% | |
| GCACTTACATCAAACAGCTC+AGG | + | chr5_2:29267792-29267811 | None:intergenic | 45.0% | |
| GGTGCAAAGCTATTGGATCT+AGG | - | chr5_2:29267895-29267914 | Msa0766860:CDS | 45.0% | |
| !! | GTTTGGATTGGTGGTGAGTT+TGG | + | chr5_2:29268044-29268063 | None:intergenic | 45.0% |
| !!! | TACAAGCCGGTGGTTTTGTA+AGG | + | chr5_2:29268208-29268227 | None:intergenic | 45.0% |
| GCAATCCTCATCTTACAAGC+CGG | + | chr5_2:29268221-29268240 | None:intergenic | 45.0% | |
| TTGCCCCACCTATATTGTTC+AGG | - | chr5_2:29268237-29268256 | Msa0766860:intron | 45.0% | |
| ! | TCAACATTGTTGGTGAGAGC+TGG | - | chr5_2:29268322-29268341 | Msa0766860:CDS | 45.0% |
| GGGATACATAACTGGATGCT+TGG | + | chr5_2:29268364-29268383 | None:intergenic | 45.0% | |
| CTTGACAGATAGGTGTACAC+AGG | + | chr5_2:29268385-29268404 | None:intergenic | 45.0% | |
| TTTGGCAGGAAAAACTAGCC+TGG | + | chr5_2:29268745-29268764 | None:intergenic | 45.0% | |
| TCAGTAGCAACAGTGGGATT+TGG | + | chr5_2:29268763-29268782 | None:intergenic | 45.0% | |
| AATATGAGGGGCAGAGAATG+TGG | + | chr5_2:29268801-29268820 | None:intergenic | 45.0% | |
| TCTCAGATTGGGTAAAGGAC+AGG | + | chr5_2:29269125-29269144 | None:intergenic | 45.0% | |
| GTCCTTTACCCAATCTGAGA+AGG | - | chr5_2:29269125-29269144 | Msa0766860:intron | 45.0% | |
| !!! | TCTTGCCCTTCTGCGTTTTT+TGG | + | chr5_2:29269181-29269200 | None:intergenic | 45.0% |
| CGATAAACTAGCGTGCATAC+GGG | + | chr5_2:29269213-29269232 | None:intergenic | 45.0% | |
| TGGACAACGAACGATTTCCA+TGG | + | chr5_2:29269278-29269297 | None:intergenic | 45.0% | |
| CAGACACTCTTTGATTAGGC+AGG | - | chr5_2:29269391-29269410 | Msa0766860:intron | 45.0% | |
| ! | GACAAAGCGTTCTTCTCAGA+TGG | - | chr5_2:29269476-29269495 | Msa0766860:CDS | 45.0% |
| GTGGCTCAGGTAAGTTTGTA+GGG | + | chr5_2:29269687-29269706 | None:intergenic | 45.0% | |
| AGTGGCTCAGGTAAGTTTGT+AGG | + | chr5_2:29269688-29269707 | None:intergenic | 45.0% | |
| CAAAACCTGTGGGTACTTCA+TGG | + | chr5_2:29269719-29269738 | None:intergenic | 45.0% | |
| AGCCTCTCATTCTCACCAAA+AGG | + | chr5_2:29269900-29269919 | None:intergenic | 45.0% | |
| ACTTTCAGTGGAACAGGGAT+AGG | - | chr5_2:29270110-29270129 | Msa0766860:intron | 45.0% | |
| ATTGAGATCCTCTCCAGTAC+CGG | + | chr5_2:29270203-29270222 | None:intergenic | 45.0% | |
| CGAAGTAGGAACTAGGAACT+AGG | + | chr5_2:29270611-29270630 | None:intergenic | 45.0% | |
| AACAGTGAAATCCACCCTAG+AGG | - | chr5_2:29270978-29270997 | Msa0766860:intron | 45.0% | |
| TACACCATATGGAGCCTCTA+GGG | + | chr5_2:29270995-29271014 | None:intergenic | 45.0% | |
| TGGCAGCCTCATATACAGAA+GGG | + | chr5_2:29271303-29271322 | None:intergenic | 45.0% | |
| ATGGCAGCCTCATATACAGA+AGG | + | chr5_2:29271304-29271323 | None:intergenic | 45.0% | |
| GTTGACATATGAATCGGTGG+AGG | - | chr5_2:29271449-29271468 | Msa0766860:intron | 45.0% | |
| ! | TTCACCTGTTTCTTGTGTGG+AGG | - | chr5_2:29271783-29271802 | Msa0766860:CDS | 45.0% |
| TTCTCCTCCACACAAGAAAC+AGG | + | chr5_2:29271790-29271809 | None:intergenic | 45.0% | |
| !! | TAAATAAATAGTTTAAATAA+AGG | + | chr5_2:29269005-29269024 | None:intergenic | 5.0% |
| CACAATGGCTACAGAGCTGT+TGG | + | chr5_2:29267836-29267855 | None:intergenic | 50.0% | |
| ! | ATAGCTTTGCACCGGCACAA+TGG | + | chr5_2:29267888-29267907 | None:intergenic | 50.0% |
| ! | TTGTGCCGGTGCAAAGCTAT+TGG | - | chr5_2:29267888-29267907 | Msa0766860:CDS | 50.0% |
| !! | AACCACCGGCTTGTAAGATG+AGG | - | chr5_2:29268213-29268232 | Msa0766860:intron | 50.0% |
| ATCCTCATCTTACAAGCCGG+TGG | + | chr5_2:29268218-29268237 | None:intergenic | 50.0% | |
| !!! | GAAGAGCATCCAGAGCCTTT+TGG | - | chr5_2:29268460-29268479 | Msa0766860:intron | 50.0% |
| TAGCAACAGTGGGATTTGGC+AGG | + | chr5_2:29268759-29268778 | None:intergenic | 50.0% | |
| GCGAGGAGTAGTAGAAGTTG+AGG | + | chr5_2:29268844-29268863 | None:intergenic | 50.0% | |
| ! | AGAGATAGTAGGGACTAGCG+AGG | + | chr5_2:29268861-29268880 | None:intergenic | 50.0% |
| ! | GGCGATAGAAGCTTTTGGTG+TGG | - | chr5_2:29268958-29268977 | Msa0766860:intron | 50.0% |
| TCGTTCGTTGTCCAAGCTTC+TGG | - | chr5_2:29269284-29269303 | Msa0766860:intron | 50.0% | |
| ! | GGAAGAAAGCATGCTCATCC+GGG | + | chr5_2:29269666-29269685 | None:intergenic | 50.0% |
| ! | GGGAAGAAAGCATGCTCATC+CGG | + | chr5_2:29269667-29269686 | None:intergenic | 50.0% |
| TACTTCATGGGAGGAAGCAG+TGG | + | chr5_2:29269706-29269725 | None:intergenic | 50.0% | |
| !! | GTTCTCCTACTGGAAGTGTC+CGG | - | chr5_2:29270181-29270200 | Msa0766860:intron | 50.0% |
| GCATGTGGCTTGACCTAGAA+TGG | + | chr5_2:29270501-29270520 | None:intergenic | 50.0% | |
| ! | GCAGGAGATGATGGTAACAG+TGG | - | chr5_2:29270842-29270861 | Msa0766860:intron | 50.0% |
| TGGTAACAGTGGATCAGCTG+CGG | - | chr5_2:29270853-29270872 | Msa0766860:intron | 50.0% | |
| CTGTGACACTCTTTGCTTGC+AGG | - | chr5_2:29270877-29270896 | Msa0766860:intron | 50.0% | |
| CTACACCATATGGAGCCTCT+AGG | + | chr5_2:29270996-29271015 | None:intergenic | 50.0% | |
| CTAGAGGCTCCATATGGTGT+AGG | - | chr5_2:29270994-29271013 | Msa0766860:intron | 50.0% | |
| ACCTGCACTTCTTTCGTGAG+AGG | + | chr5_2:29271615-29271634 | None:intergenic | 50.0% | |
| CAGCTCTGTAGCCATTGTGC+CGG | - | chr5_2:29267837-29267856 | Msa0766860:CDS | 55.0% | |
| CGGCAAATACACCGGCACAA+TGG | + | chr5_2:29267851-29267870 | None:intergenic | 55.0% | |
| GGGATGGAACTATGGCAACC+AGG | - | chr5_2:29268724-29268743 | Msa0766860:intron | 55.0% | |
| GGGCAGAGAATGTGGAAGAG+AGG | + | chr5_2:29268793-29268812 | None:intergenic | 55.0% | |
| GGTGGGAAGATATACGAGCC+CGG | - | chr5_2:29269645-29269664 | Msa0766860:CDS | 55.0% | |
| ! | TCCTCCCATGAAGTACCCAC+AGG | - | chr5_2:29269711-29269730 | Msa0766860:CDS | 55.0% |
| ACCTGTGGGTACTTCATGGG+AGG | + | chr5_2:29269715-29269734 | None:intergenic | 55.0% | |
| ! | CAGTACCGGACACTTCCAGT+AGG | + | chr5_2:29270189-29270208 | None:intergenic | 55.0% |
| !! | CTACTGGAAGTGTCCGGTAC+TGG | - | chr5_2:29270187-29270206 | Msa0766860:intron | 55.0% |
| TGGCACAGTGATGCAGAACC+TGG | + | chr5_2:29270754-29270773 | None:intergenic | 55.0% | |
| TCCACCCTAGAGGCTCCATA+TGG | - | chr5_2:29270988-29271007 | Msa0766860:intron | 55.0% | |
| ! | ACCATATGGAGCCTCTAGGG+TGG | + | chr5_2:29270992-29271011 | None:intergenic | 55.0% |
| ACAGGACAGGAAACGGCTAC+TGG | - | chr5_2:29271422-29271441 | Msa0766860:intron | 55.0% | |
| ! | GCCTCTCACGAAAGAAGTGC+AGG | - | chr5_2:29271611-29271630 | Msa0766860:intron | 55.0% |
| ATGGGAGGAAGCAGTGGCTC+AGG | + | chr5_2:29269700-29269719 | None:intergenic | 60.0% | |
| !! | GGAAGTGTCCGGTACTGGAG+AGG | - | chr5_2:29270192-29270211 | Msa0766860:intron | 60.0% |
| Chromosome | Type | Strat | End | Strand | Name |
|---|---|---|---|---|---|
| chr5_2 | gene | 29267203 | 29271957 | 29267203 | ID=Msa0766860;Name=Msa0766860 |
| chr5_2 | mRNA | 29267203 | 29271957 | 29267203 | ID=Msa0766860-mRNA-1;Parent=Msa0766860;Name=Msa0766860-mRNA-1;_AED=0.06;_eAED=0.06;_QI=42|0.8|0.83|1|1|1|6|295|334 |
| chr5_2 | exon | 29267203 | 29267734 | 29267203 | ID=Msa0766860-mRNA-1:exon:11170;Parent=Msa0766860-mRNA-1 |
| chr5_2 | exon | 29267827 | 29267919 | 29267827 | ID=Msa0766860-mRNA-1:exon:11169;Parent=Msa0766860-mRNA-1 |
| chr5_2 | exon | 29268262 | 29268450 | 29268262 | ID=Msa0766860-mRNA-1:exon:11168;Parent=Msa0766860-mRNA-1 |
| chr5_2 | exon | 29269428 | 29269514 | 29269428 | ID=Msa0766860-mRNA-1:exon:11167;Parent=Msa0766860-mRNA-1 |
| chr5_2 | exon | 29269604 | 29269823 | 29269604 | ID=Msa0766860-mRNA-1:exon:11166;Parent=Msa0766860-mRNA-1 |
| chr5_2 | exon | 29271737 | 29271957 | 29271737 | ID=Msa0766860-mRNA-1:exon:11165;Parent=Msa0766860-mRNA-1 |
| chr5_2 | five_prime_UTR | 29271916 | 29271957 | 29271916 | ID=Msa0766860-mRNA-1:five_prime_utr;Parent=Msa0766860-mRNA-1 |
| chr5_2 | CDS | 29271737 | 29271915 | 29271737 | ID=Msa0766860-mRNA-1:cds;Parent=Msa0766860-mRNA-1 |
| chr5_2 | CDS | 29269604 | 29269823 | 29269604 | ID=Msa0766860-mRNA-1:cds;Parent=Msa0766860-mRNA-1 |
| chr5_2 | CDS | 29269428 | 29269514 | 29269428 | ID=Msa0766860-mRNA-1:cds;Parent=Msa0766860-mRNA-1 |
| chr5_2 | CDS | 29268262 | 29268450 | 29268262 | ID=Msa0766860-mRNA-1:cds;Parent=Msa0766860-mRNA-1 |
| chr5_2 | CDS | 29267827 | 29267919 | 29267827 | ID=Msa0766860-mRNA-1:cds;Parent=Msa0766860-mRNA-1 |
| chr5_2 | CDS | 29267498 | 29267734 | 29267498 | ID=Msa0766860-mRNA-1:cds;Parent=Msa0766860-mRNA-1 |
| chr5_2 | three_prime_UTR | 29267203 | 29267497 | 29267203 | ID=Msa0766860-mRNA-1:three_prime_utr;Parent=Msa0766860-mRNA-1 |
| Gene Sequence |
| Protein sequence |
