AlfalfaGEDB Alfalfa Gene Editing Database

M. sativa cultivar zhongmu-4 / Msa0825520


Query id Subject id identity % alignment length mismatches gap openings q. start q. end s. start s. end e-value bit score
Msa0825520 MtrunA17_Chr5g0447341 98.958 480 4 1 1 480 1 479 0.0 982
Msa0825520 MtrunA17_Chr3g0120471 88.333 480 51 2 1 480 1 475 0.0 842
Msa0825520 MtrunA17_Chr4g0074531 53.493 458 203 5 30 479 29 484 1.26e-174 500
Msa0825520 MtrunA17_Chr3g0141761 55.324 432 174 9 59 476 64 490 2.66e-167 482
Msa0825520 MtrunA17_Chr7g0271011 56.829 410 160 9 84 479 93 499 3.30e-166 479
Msa0825520 MtrunA17_Chr4g0035171 52.239 402 184 5 84 480 94 492 8.08e-153 445
Msa0825520 MtrunA17_Chr0c30g0494071 54.639 291 113 5 85 373 26 299 3.00e-105 320
Msa0825520 MtrunA17_Chr3g0144741 55.634 284 107 6 59 327 52 331 8.69e-95 291
Msa0825520 MtrunA17_Chr4g0077071 93.750 80 5 0 348 427 2 81 1.65e-47 159
Msa0825520 MtrunA17_Chr3g0144731 48.696 115 59 0 365 479 10 124 4.95e-36 130
Msa0825520 MtrunA17_Chr6g0454161 78.182 55 12 0 420 474 121 175 1.91e-21 95.5
Msa0825520 MtrunA17_Chr3g0101491 68.293 41 13 0 376 416 30 70 7.47e-12 61.6
Query id Subject id identity % alignment length mismatches gap openings q. start q. end s. start s. end e-value bit score
Msa0825520 AT5G48300.1 85.124 484 68 3 1 480 1 484 0.0 825
Msa0825520 AT5G19220.1 52.510 478 212 8 10 477 11 483 3.49e-174 500
Msa0825520 AT1G27680.1 58.209 402 159 5 84 479 83 481 4.27e-174 499
Msa0825520 AT4G39210.2 47.314 484 222 9 16 480 16 485 1.07e-153 447
Msa0825520 AT4G39210.1 47.314 484 222 9 16 480 16 485 1.07e-153 447
Msa0825520 AT2G21590.2 50.114 437 197 7 59 480 57 487 6.34e-152 443
Msa0825520 AT2G21590.3 50.114 437 197 7 59 480 57 487 6.34e-152 443
Msa0825520 AT2G21590.5 50.114 437 197 7 59 480 57 487 6.34e-152 443
Msa0825520 AT2G21590.4 50.114 437 197 7 59 480 57 487 6.34e-152 443
Msa0825520 AT2G21590.7 50.114 437 197 7 59 480 57 487 6.34e-152 443
Msa0825520 AT2G21590.1 50.114 437 197 7 59 480 57 487 6.34e-152 443
Msa0825520 AT2G21590.6 50.114 437 197 7 59 480 57 487 6.34e-152 443
Msa0825520 AT1G05610.1 45.991 424 210 6 59 480 34 440 1.17e-126 377
Msa0825520 AT1G05610.2 46.244 426 212 6 59 480 34 446 1.74e-126 377

Find 135 sgRNAs with CRISPR-Local

Find 234 sgRNAs with CRISPR-GE


CRISPR-Local

CRISPR-Local
sgRNA_sequence on_target_score Position Region
GACAAGATTGTTACAGTTTC+TGG 0.099528 5_3:-65380992 Msa0825520:CDS
GATGGATTAGAAAGTAAAAT+AGG 0.165084 5_3:+65378100 None:intergenic
TTAGGTCGATACTACCATTT+TGG 0.182482 5_3:-65379469 Msa0825520:intron
ACTTTGAAGTTCATCTTTAA+TGG 0.213011 5_3:-65377263 Msa0825520:three_prime_UTR
ATGCTGTGAGGCAATATTTA+TGG 0.223531 5_3:-65379793 Msa0825520:CDS
CTCCCTCTGTTCCTAATCTT+TGG 0.231315 5_3:-65378032 Msa0825520:three_prime_UTR
CTCTCTATGTCTCTGATCTT+TGG 0.233297 5_3:+65377723 None:intergenic
ATTTAGTACAATGGCTTCTA+TGG 0.248755 5_3:-65381125 Msa0825520:exon
TCTTATACCTGGAACCAATT+AGG 0.277877 5_3:+65380220 None:intergenic
GATATCACTGATAGTGTTAT+TGG 0.282523 5_3:-65378693 Msa0825520:CDS
TGTAACTTGTAAAGGTATAA+AGG 0.294533 5_3:-65377800 Msa0825520:three_prime_UTR
GCTTGCAACTGGTCTCCTTT+TGG 0.300205 5_3:+65379563 None:intergenic
TGGGGAAGGATGTGTGATTA+AGG 0.308216 5_3:-65378673 Msa0825520:intron
TGAGACAACCAAAACTTAAA+AGG 0.319050 5_3:-65377747 Msa0825520:three_prime_UTR
CTATTTAAGCAGTTGCTAAC+AGG 0.334981 5_3:+65380388 None:intergenic
AGCTTTGCGTCGAAACATAA+AGG 0.336368 5_3:+65378007 None:intergenic
TTCATCATCAAGACCCAAAA+TGG 0.338471 5_3:+65379455 None:intergenic
AGTCATTTGCACCAGGAAAT+TGG 0.341546 5_3:+65379352 None:intergenic
ATACCCATGCTAGCAATAAA+AGG 0.346195 5_3:+65379417 None:intergenic
ATATCACTGATAGTGTTATT+GGG 0.347690 5_3:-65378692 Msa0825520:CDS
TGATTGAAAATGAACATCTT+TGG 0.359268 5_3:+65377019 None:intergenic
TTCCTGGTGCAAATGACTTT+GGG 0.360622 5_3:-65379347 Msa0825520:CDS
TTGCTTCGCGACCAATTTCC+TGG 0.362208 5_3:-65379363 Msa0825520:CDS
GAAAAGCGTGCAACTGCTTT+CGG 0.366218 5_3:-65379635 Msa0825520:CDS
TATCGCGGTTGAGTGTAAAT+TGG 0.366670 5_3:+65378744 None:intergenic
TAGTTACATGTTTACATGAA+TGG 0.383955 5_3:+65377572 None:intergenic
TATTAAGCTTGACAAATTGT+TGG 0.392207 5_3:-65378072 Msa0825520:three_prime_UTR
ATGGATTAGAAAGTAAAATA+GGG 0.393658 5_3:+65378101 None:intergenic
TTTCCTGGTGCAAATGACTT+TGG 0.393661 5_3:-65379348 Msa0825520:CDS
GTGTTTGTGTTACTTTGTTA+AGG 0.394623 5_3:+65381154 None:intergenic
TGAGAATCCTAATTGGTTCC+AGG 0.394813 5_3:-65380227 Msa0825520:intron
TCAAAGTCTCACTCAACATT+AGG 0.395249 5_3:+65377279 None:intergenic
CTTACTTATATGATGGCTAC+TGG 0.396033 5_3:-65378959 Msa0825520:CDS
TATTGAAGACACTTTGTTGA+TGG 0.396056 5_3:-65378472 Msa0825520:CDS
GTTGACAAGAATGCTAGAAT+TGG 0.404186 5_3:-65378173 Msa0825520:CDS
AAAGTCCTGAGAATCCTAAT+TGG 0.411364 5_3:-65380234 Msa0825520:CDS
GAACAGAGGGAGTAGATGAT+AGG 0.412067 5_3:+65378043 None:intergenic
GCAAAACCAGCTGTTCCTCT+TGG 0.419432 5_3:-65380436 Msa0825520:CDS
TCTGCTTCCACGTCTAAGAT+AGG 0.421520 5_3:-65377223 Msa0825520:three_prime_UTR
GGCAGTGTTCCAATTGGTAT+TGG 0.426491 5_3:-65378224 Msa0825520:CDS
TTCTCATCATCTCAACTCTC+TGG 0.426995 5_3:-65381016 Msa0825520:CDS
TTGTTCATTCAGAGTGTACT+TGG 0.433709 5_3:-65380514 Msa0825520:intron
TCCATTCTGTGGTCGGGCTG+CGG 0.435088 5_3:-65378518 Msa0825520:CDS
TGTGAATAATAAAGGAAAGT+TGG 0.435143 5_3:+65377958 None:intergenic
AGTGTACTTGGCATTATACT+TGG 0.438582 5_3:-65380502 Msa0825520:CDS
GTAACTTGTAAAGGTATAAA+GGG 0.439612 5_3:-65377799 Msa0825520:three_prime_UTR
TGGAACCAATTAGGATTCTC+AGG 0.441668 5_3:+65380229 None:intergenic
ATTCCTGGTGCTACTTCCAT+TGG 0.442617 5_3:-65379315 Msa0825520:CDS
AAAAGCCTGTACCTGACTTC+AGG 0.442791 5_3:-65378884 Msa0825520:intron
AAATGAATTTCACGTCTACT+AGG 0.444975 5_3:+65377841 None:intergenic
GCTTTGCGTCGAAACATAAA+GGG 0.446611 5_3:+65378008 None:intergenic
GAGTAACAATCACATGCTTC+CGG 0.448356 5_3:+65380945 None:intergenic
TTTGGGAGTGAAGTGATTCC+TGG 0.451969 5_3:-65379330 Msa0825520:CDS
CATCTGTTTCCCTATGTGCT+TGG 0.452131 5_3:+65379690 None:intergenic
CAACTTGATTATTCAAAAGA+AGG 0.452178 5_3:+65377129 None:intergenic
CTCTGCTAGCGTCAGGATCA+AGG 0.461795 5_3:+65380885 None:intergenic
ACATAAAGGGACCAAAGATT+AGG 0.463267 5_3:+65378021 None:intergenic
CGTGCTTATGCAAGCAACCT+TGG 0.464799 5_3:-65380301 Msa0825520:CDS
GTTACAGTTTCTGGTGGTGC+AGG 0.467435 5_3:-65380983 Msa0825520:CDS
CTATTTATTTACCTGAAGTC+AGG 0.470764 5_3:+65378873 None:intergenic
GATGGGCGCGGATTATTATG+AGG 0.472706 5_3:-65378454 Msa0825520:intron
CGTAATCCATTCGATACAAA+TGG 0.477237 5_3:+65379723 None:intergenic
GGAATGAAAGTGTATATAGT+TGG 0.485471 5_3:+65378122 None:intergenic
TTAATGGTGAAGGGTTTAAA+CGG 0.488302 5_3:-65377247 Msa0825520:three_prime_UTR
TCACCTTCATAGCTTGCAAC+TGG 0.488306 5_3:+65379552 None:intergenic
AAGTTCATCTTTAATGGTGA+AGG 0.489414 5_3:-65377257 Msa0825520:three_prime_UTR
GTTTCTGGTGGTGCAGGAAG+AGG 0.489728 5_3:-65380977 Msa0825520:CDS
GTCAAGCTTAATATGAGAGA+TGG 0.490705 5_3:+65378082 None:intergenic
TGCATTATAGAAAGCCTCAA+TGG 0.493820 5_3:+65378923 None:intergenic
GAGTTTCTGCCAATACCAAT+TGG 0.493872 5_3:+65378215 None:intergenic
AGACCAGTTGCAAGCTATGA+AGG 0.497750 5_3:-65379555 Msa0825520:intron
CGGTATCGTCACAATAATCA+AGG 0.503615 5_3:-65377444 Msa0825520:three_prime_UTR
GTTAAAGGCAGTGTTCCAAT+TGG 0.505400 5_3:-65378230 Msa0825520:CDS
ATTTACCTGAAGTCAGGTAC+AGG 0.505990 5_3:+65378879 None:intergenic
CTCCCAAAGTCATTTGCACC+AGG 0.511433 5_3:+65379345 None:intergenic
ACTCAACATTAGGAAACAAA+AGG 0.511538 5_3:+65377289 None:intergenic
ATGGCTTCTATGGCTACTAC+TGG 0.512911 5_3:-65381115 Msa0825520:CDS
TTTGCTCTCTTCTTGGTGAG+TGG 0.513424 5_3:+65380454 None:intergenic
AAACTCACTCTGCTAGCGTC+AGG 0.517611 5_3:+65380878 None:intergenic
ATTGAAGACACTTTGTTGAT+GGG 0.519372 5_3:-65378471 Msa0825520:CDS
TTTGTCAAATCTAATGTGAA+GGG 0.519709 5_3:-65377317 Msa0825520:three_prime_UTR
AGAAATTTATCCAAGCACAT+AGG 0.522176 5_3:-65379700 Msa0825520:CDS
TTAGCTCCAAGAGGAACAGC+TGG 0.523224 5_3:+65380430 None:intergenic
CGGTGACCATTTGTATCGAA+TGG 0.523691 5_3:-65379729 Msa0825520:CDS
GTGCAAGCTTACTTATATGA+TGG 0.525785 5_3:-65378966 Msa0825520:CDS
ACCGCAGCCCGACCACAGAA+TGG 0.529090 5_3:+65378517 None:intergenic
TGTGAATCAGAAACAGCCTT+AGG 0.530492 5_3:+65380923 None:intergenic
GTACTTGGCATTATACTTGG+AGG 0.530626 5_3:-65380499 Msa0825520:CDS
GCATGTGATTGTTACTCCTA+AGG 0.531636 5_3:-65380939 Msa0825520:CDS
GAAATTTATCCAAGCACATA+GGG 0.548140 5_3:-65379699 Msa0825520:CDS
CAGGAAGAGGAAGATGCATC+CGG 0.550332 5_3:-65380964 Msa0825520:CDS
GACCAAAGATTAGGAACAGA+GGG 0.550616 5_3:+65378030 None:intergenic
CACTGTGGCTGCATTGCCAA+TGG 0.554069 5_3:-65379660 Msa0825520:CDS
AGACACTTTGTTGATGGGCG+CGG 0.554204 5_3:-65378466 Msa0825520:CDS
GCTTTCTATAATGCAAATCT+CGG 0.554882 5_3:-65378915 Msa0825520:CDS
AGTTCATCTTTAATGGTGAA+GGG 0.560849 5_3:-65377256 Msa0825520:three_prime_UTR
GAAGGTTATTTCATTAAAAG+CGG 0.560913 5_3:-65377464 Msa0825520:three_prime_UTR
CACAGATACATTTAGTACAA+TGG 0.562022 5_3:-65381134 Msa0825520:exon
ATTATACTTGGAGGTGGTGC+CGG 0.562094 5_3:-65380490 Msa0825520:CDS
TTGGAGTACTTAATTCTGGC+CGG 0.562380 5_3:-65379749 Msa0825520:CDS
TTACTTATATGATGGCTACT+GGG 0.563247 5_3:-65378958 Msa0825520:CDS
AATAATAATTGTAGTAGACA+TGG 0.563688 5_3:-65377693 Msa0825520:three_prime_UTR
ACTGATAGTGTTATTGGGGA+AGG 0.567862 5_3:-65378687 Msa0825520:CDS
GCTTATGCAAGCAACCTTGG+TGG 0.575280 5_3:-65380298 Msa0825520:CDS
CTTGGCATTATACTTGGAGG+TGG 0.578848 5_3:-65380496 Msa0825520:CDS
CTGCGGTCTTGCATATCAGA+AGG 0.580045 5_3:-65378501 Msa0825520:CDS
TTTCCAATGGAAGTAGCACC+AGG 0.583076 5_3:+65379312 None:intergenic
AACACATACTCTCTTTCCAA+TGG 0.587424 5_3:+65379299 None:intergenic
TGTAAATAATAGCTGAAGAG+AGG 0.590529 5_3:-65377153 Msa0825520:three_prime_UTR
GAGTGGATATAGACGAGTAC+CGG 0.599789 5_3:+65380471 None:intergenic
CTGATGAAGATCGATGAAGA+GGG 0.603378 5_3:-65379611 Msa0825520:CDS
TCTGATGAAGATCGATGAAG+AGG 0.605701 5_3:-65379612 Msa0825520:CDS
GGAAGACATTGGTACCATTG+AGG 0.607376 5_3:-65378937 Msa0825520:CDS
TCAGCATCAAGCATCTTCGA+TGG 0.609318 5_3:+65378714 None:intergenic
TATCACTGATAGTGTTATTG+GGG 0.610791 5_3:-65378691 Msa0825520:CDS
CATAAGCACGAGAAAGATGT+CGG 0.618768 5_3:+65380314 None:intergenic
GATGGCTACTGGGAAGACAT+TGG 0.627351 5_3:-65378948 Msa0825520:CDS
GCATCAAGCATCTTCGATGG+AGG 0.628793 5_3:+65378717 None:intergenic
GAAGCTGCAAGAGAAACAGA+AGG 0.631881 5_3:-65377482 Msa0825520:three_prime_UTR
AAGGATGCGTTAATTCCTAG+TGG 0.633562 5_3:-65377425 Msa0825520:three_prime_UTR
AAGATTGTTACAGTTTCTGG+TGG 0.637778 5_3:-65380989 Msa0825520:CDS
CATTCGATACAAATGGTCAC+CGG 0.640845 5_3:+65379730 None:intergenic
TTCTAAATGACAGTTCCACT+AGG 0.642519 5_3:+65377410 None:intergenic
TCTTGATGATGAAAGAGCAA+AGG 0.642796 5_3:-65379445 Msa0825520:CDS
TAGAATTGGAGAAAATGTGA+AGG 0.647495 5_3:-65378159 Msa0825520:CDS
AGTCTATAGTTAGCTCCAAG+AGG 0.652838 5_3:+65380421 None:intergenic
ATGAAAGCCTATCTTAGACG+TGG 0.663148 5_3:+65377216 None:intergenic
GTGTAGTTTATACAAAATCG+TGG 0.672293 5_3:+65377375 None:intergenic
GGACCAAAGATTAGGAACAG+AGG 0.673837 5_3:+65378029 None:intergenic
TGATGAAGATCGATGAAGAG+GGG 0.678706 5_3:-65379610 Msa0825520:CDS
TTCGATGGAGGCAAATATCG+CGG 0.684638 5_3:+65378729 None:intergenic
TAGATTTGACAAAATCACAG+TGG 0.751668 5_3:+65377327 None:intergenic
AGGGTACTGCAGATGCTGTG+AGG 0.771116 5_3:-65379805 Msa0825520:CDS
AACAGATGCTGATATCACTG+TGG 0.779203 5_3:-65379675 Msa0825520:CDS
GATGAAGAAGAAGAACAACG+TGG 0.833851 5_3:+65381079 None:intergenic

CRISPR-GE

badsite warning sgRNA_sequence Strand Position Region GC_content
!! AAAAAAATTGTGAATAATAA+AGG + chr5_3:65380259-65380278 None:intergenic 10.0%
!!! TTCATTTTATGTATTTTTTT+TGG - chr5_3:65380381-65380400 Msa0825520:CDS 10.0%
!!! TCATTTTATGTATTTTTTTT+GGG - chr5_3:65380382-65380401 Msa0825520:CDS 10.0%
!! AATATTTATTCTCTATTCTT+AGG - chr5_3:65378719-65378738 Msa0825520:CDS 15.0%
!!! TTTAATTTCAAGAAACTTTT+CGG - chr5_3:65378941-65378960 Msa0825520:CDS 15.0%
!!! ATCTATATATTTTCAATGTA+CGG - chr5_3:65380340-65380359 Msa0825520:CDS 15.0%
!!! ACTTTTAAAAATCTTACATA+TGG - chr5_3:65380664-65380683 Msa0825520:intron 15.0%
!!! TTTATGAGCTATTTATTTTT+TGG - chr5_3:65381021-65381040 Msa0825520:CDS 15.0%
!!! TTTTTATGTTGCTTTTGAAT+CGG - chr5_3:65378042-65378061 Msa0825520:three_prime_UTR 20.0%
!! ATATTTGAAAAGATTTGATG+TGG - chr5_3:65378371-65378390 Msa0825520:intron 20.0%
!! ATTTGTTTAGGTATGAATTA+TGG + chr5_3:65378682-65378701 None:intergenic 20.0%
!! AAATGTTTGTTTCAATCTAA+AGG + chr5_3:65379054-65379073 None:intergenic 20.0%
!! ATGACAATATGATGATTATA+TGG + chr5_3:65379367-65379386 None:intergenic 20.0%
!! AGATGTCAAATATGATTAAA+TGG - chr5_3:65379610-65379629 Msa0825520:CDS 20.0%
!!! AGAAACTTCCTTTTTTTTTT+TGG - chr5_3:65379644-65379663 Msa0825520:CDS 20.0%
!!! ATGGATTAGAAAGTAAAATA+GGG + chr5_3:65380108-65380127 None:intergenic 20.0%
!! AATAATAATTGTAGTAGACA+TGG - chr5_3:65380513-65380532 Msa0825520:intron 20.0%
!! TACCAGCTGAAAATAATTTT+TGG - chr5_3:65377548-65377567 Msa0825520:three_prime_UTR 25.0%
!! AACCAAAAATTATTTTCAGC+TGG + chr5_3:65377553-65377572 None:intergenic 25.0%
! TTTCTCTTGTAGATTGAATT+GGG - chr5_3:65377571-65377590 Msa0825520:three_prime_UTR 25.0%
! TTCAAAAGCAACATAAAAAG+AGG + chr5_3:65378041-65378060 None:intergenic 25.0%
!!! AACTTTTGAAGCATTTGTTT+AGG + chr5_3:65378694-65378713 None:intergenic 25.0%
! CTTGAAATTAAACAACTAGA+AGG + chr5_3:65378933-65378952 None:intergenic 25.0%
!! TGTTTCAATCTAAAGGTTTT+TGG + chr5_3:65379047-65379066 None:intergenic 25.0%
!! AGTTTTTGTGAAAAATTCAC+AGG - chr5_3:65379218-65379237 Msa0825520:intron 25.0%
! TGACTTCAGGTAAATAAATA+GGG - chr5_3:65379335-65379354 Msa0825520:CDS 25.0%
!! ATATCACTGATAGTGTTATT+GGG - chr5_3:65379514-65379533 Msa0825520:intron 25.0%
! CTAAGGATCCAAAAAAAAAA+AGG + chr5_3:65379655-65379674 None:intergenic 25.0%
! GATTATTATGAGGTAAAATG+CGG - chr5_3:65379762-65379781 Msa0825520:CDS 25.0%
! AAATCAGAAAATCAATGTTG+CGG + chr5_3:65379925-65379944 None:intergenic 25.0%
!!! AGAAGCTGATAAAAGTTTTT+TGG - chr5_3:65379951-65379970 Msa0825520:intron 25.0%
!!! AAAAGTTTTTTGGCTGTTAA+AGG - chr5_3:65379961-65379980 Msa0825520:intron 25.0%
!! AACAATTGCTCTTTTGATAT+GGG + chr5_3:65380016-65380035 None:intergenic 25.0%
!!! GATGGATTAGAAAGTAAAAT+AGG + chr5_3:65380109-65380128 None:intergenic 25.0%
! TATTAAGCTTGACAAATTGT+TGG - chr5_3:65380134-65380153 Msa0825520:intron 25.0%
! TGTGAATAATAAAGGAAAGT+TGG + chr5_3:65380251-65380270 None:intergenic 25.0%
!! TGTAACTTGTAAAGGTATAA+AGG - chr5_3:65380406-65380425 Msa0825520:CDS 25.0%
!! GTAACTTGTAAAGGTATAAA+GGG - chr5_3:65380407-65380426 Msa0825520:CDS 25.0%
! TAGTTACATGTTTACATGAA+TGG + chr5_3:65380637-65380656 None:intergenic 25.0%
!! GAAGGTTATTTCATTAAAAG+CGG - chr5_3:65380742-65380761 Msa0825520:intron 25.0%
!! GATTTTGTATAAACTACACT+TGG - chr5_3:65380835-65380854 Msa0825520:intron 25.0%
!! TTTTGTCAAATCTAATGTGA+AGG - chr5_3:65380888-65380907 Msa0825520:CDS 25.0%
! TTTGTCAAATCTAATGTGAA+GGG - chr5_3:65380889-65380908 Msa0825520:CDS 25.0%
!!! ACTTTGAAGTTCATCTTTAA+TGG - chr5_3:65380943-65380962 Msa0825520:CDS 25.0%
! CAACTTGATTATTCAAAAGA+AGG + chr5_3:65381080-65381099 None:intergenic 25.0%
! TGATTGAAAATGAACATCTT+TGG + chr5_3:65381190-65381209 None:intergenic 25.0%
!! GTGTTTGTGTTACTTTGTTA+AGG + chr5_3:65377055-65377074 None:intergenic 30.0%
CACAGATACATTTAGTACAA+TGG - chr5_3:65377072-65377091 Msa0825520:three_prime_UTR 30.0%
ATTTAGTACAATGGCTTCTA+TGG - chr5_3:65377081-65377100 Msa0825520:three_prime_UTR 30.0%
! GAGTTTATCTCTTTTGCTTT+TGG - chr5_3:65377345-65377364 Msa0825520:three_prime_UTR 30.0%
GTTTCTCTTGTAGATTGAAT+TGG - chr5_3:65377570-65377589 Msa0825520:three_prime_UTR 30.0%
GCTAATTGAGAACATAGTTA+AGG + chr5_3:65378015-65378034 None:intergenic 30.0%
TATAATGTGTCTCATGTTTC+TGG - chr5_3:65378125-65378144 Msa0825520:three_prime_UTR 30.0%
TCTCCTATATTTGTATTCTC+CGG + chr5_3:65378276-65378295 None:intergenic 30.0%
! TTCATTTCTAGAGATGATAC+AGG + chr5_3:65378348-65378367 None:intergenic 30.0%
!! TTTTGAAGAGCACAATGTTT+TGG - chr5_3:65378438-65378457 Msa0825520:intron 30.0%
!!! TGTTTTGGAGTACTTAATTC+TGG - chr5_3:65378453-65378472 Msa0825520:intron 30.0%
AGAAATTTATCCAAGCACAT+AGG - chr5_3:65378506-65378525 Msa0825520:CDS 30.0%
GAAATTTATCCAAGCACATA+GGG - chr5_3:65378507-65378526 Msa0825520:CDS 30.0%
! GAATTTTCAGAAAAGCCAAA+AGG - chr5_3:65378628-65378647 Msa0825520:intron 30.0%
!! CAAACATTTGTTTTTCCCAT+CGG - chr5_3:65379065-65379084 Msa0825520:intron 30.0%
CTAAAACTTCATCACGATAA+AGG - chr5_3:65379105-65379124 Msa0825520:intron 30.0%
GGATTATAAAGTTCAACAGT+TGG + chr5_3:65379157-65379176 None:intergenic 30.0%
! AGCTATGAATGTTTTATAGC+AGG + chr5_3:65379178-65379197 None:intergenic 30.0%
ACATTCATAGCTTAATTCTC+AGG - chr5_3:65379186-65379205 Msa0825520:intron 30.0%
TTACTTATATGATGGCTACT+GGG - chr5_3:65379248-65379267 Msa0825520:intron 30.0%
GCTTTCTATAATGCAAATCT+CGG - chr5_3:65379291-65379310 Msa0825520:intron 30.0%
CTATTTATTTACCTGAAGTC+AGG + chr5_3:65379336-65379355 None:intergenic 30.0%
CTGACTTCAGGTAAATAAAT+AGG - chr5_3:65379334-65379353 Msa0825520:CDS 30.0%
! GATATCACTGATAGTGTTAT+TGG - chr5_3:65379513-65379532 Msa0825520:intron 30.0%
! TATCACTGATAGTGTTATTG+GGG - chr5_3:65379515-65379534 Msa0825520:intron 30.0%
! TGGAAAATTTTGCAGTTCTA+AGG + chr5_3:65379672-65379691 None:intergenic 30.0%
! AAAATTTTCCATTCTGTGGT+CGG - chr5_3:65379681-65379700 Msa0825520:CDS 30.0%
TATTGAAGACACTTTGTTGA+TGG - chr5_3:65379734-65379753 Msa0825520:CDS 30.0%
ATTGAAGACACTTTGTTGAT+GGG - chr5_3:65379735-65379754 Msa0825520:CDS 30.0%
ATTTGCTTGTGTAAGTTACA+AGG - chr5_3:65379884-65379903 Msa0825520:intron 30.0%
TTTGCTTGTGTAAGTTACAA+GGG - chr5_3:65379885-65379904 Msa0825520:intron 30.0%
! CAACAATTGCTCTTTTGATA+TGG + chr5_3:65380017-65380036 None:intergenic 30.0%
TAGAATTGGAGAAAATGTGA+AGG - chr5_3:65380047-65380066 Msa0825520:intron 30.0%
! GGAATGAAAGTGTATATAGT+TGG + chr5_3:65380087-65380106 None:intergenic 30.0%
AAATGAATTTCACGTCTACT+AGG + chr5_3:65380368-65380387 None:intergenic 30.0%
!!! TTTTGGGTTGTAACTTGTAA+AGG - chr5_3:65380398-65380417 Msa0825520:CDS 30.0%
TGAGACAACCAAAACTTAAA+AGG - chr5_3:65380459-65380478 Msa0825520:CDS 30.0%
!!! TCTTTGGTCCTTTTAAGTTT+TGG + chr5_3:65380470-65380489 None:intergenic 30.0%
GTGTAGTTTATACAAAATCG+TGG + chr5_3:65380834-65380853 None:intergenic 30.0%
TAGATTTGACAAAATCACAG+TGG + chr5_3:65380882-65380901 None:intergenic 30.0%
ACTCAACATTAGGAAACAAA+AGG + chr5_3:65380920-65380939 None:intergenic 30.0%
AAGTTCATCTTTAATGGTGA+AGG - chr5_3:65380949-65380968 Msa0825520:CDS 30.0%
AGTTCATCTTTAATGGTGAA+GGG - chr5_3:65380950-65380969 Msa0825520:CDS 30.0%
TTAATGGTGAAGGGTTTAAA+CGG - chr5_3:65380959-65380978 Msa0825520:CDS 30.0%
TGTAAATAATAGCTGAAGAG+AGG - chr5_3:65381053-65381072 Msa0825520:CDS 30.0%
!! GTTATGTGTGTTTTTGTGTG+TGG + chr5_3:65377027-65377046 None:intergenic 35.0%
GACAAGATTGTTACAGTTTC+TGG - chr5_3:65377214-65377233 Msa0825520:three_prime_UTR 35.0%
! AAGATTGTTACAGTTTCTGG+TGG - chr5_3:65377217-65377236 Msa0825520:three_prime_UTR 35.0%
TCAGCTCTTAGCTCAAAAAA+AGG + chr5_3:65377382-65377401 None:intergenic 35.0%
ATGAAGCACATATACGAACA+CGG + chr5_3:65377511-65377530 None:intergenic 35.0%
TTGTTCATTCAGAGTGTACT+TGG - chr5_3:65377692-65377711 Msa0825520:three_prime_UTR 35.0%
AGTGTACTTGGCATTATACT+TGG - chr5_3:65377704-65377723 Msa0825520:three_prime_UTR 35.0%
CTATTTAAGCAGTTGCTAAC+AGG + chr5_3:65377821-65377840 None:intergenic 35.0%
!!! CAAAAATGAGGGTTTTGTTG+AGG - chr5_3:65377934-65377953 Msa0825520:three_prime_UTR 35.0%
AAAGTCCTGAGAATCCTAAT+TGG - chr5_3:65377972-65377991 Msa0825520:three_prime_UTR 35.0%
TCTTATACCTGGAACCAATT+AGG + chr5_3:65377989-65378008 None:intergenic 35.0%
AGTTAAGGCAATCTTATACC+TGG + chr5_3:65378000-65378019 None:intergenic 35.0%
GGTAAACGTGTATCGTTAAA+TGG - chr5_3:65378167-65378186 Msa0825520:CDS 35.0%
TATTTGTATTCTCCGGTTGT+AGG + chr5_3:65378269-65378288 None:intergenic 35.0%
CAACCGGAGAATACAAATAT+AGG - chr5_3:65378270-65378289 Msa0825520:intron 35.0%
ATGCTGTGAGGCAATATTTA+TGG - chr5_3:65378413-65378432 Msa0825520:intron 35.0%
CGTAATCCATTCGATACAAA+TGG + chr5_3:65378486-65378505 None:intergenic 35.0%
! TTAGGTCGATACTACCATTT+TGG - chr5_3:65378737-65378756 Msa0825520:CDS 35.0%
! TAGGTCGATACTACCATTTT+GGG - chr5_3:65378738-65378757 Msa0825520:CDS 35.0%
TTCATCATCAAGACCCAAAA+TGG + chr5_3:65378754-65378773 None:intergenic 35.0%
!! TCTTGATGATGAAAGAGCAA+AGG - chr5_3:65378761-65378780 Msa0825520:CDS 35.0%
! AATGCCTTTTATTGCTAGCA+TGG - chr5_3:65378785-65378804 Msa0825520:intron 35.0%
! ATGCCTTTTATTGCTAGCAT+GGG - chr5_3:65378786-65378805 Msa0825520:intron 35.0%
ATACCCATGCTAGCAATAAA+AGG + chr5_3:65378792-65378811 None:intergenic 35.0%
AACACATACTCTCTTTCCAA+TGG + chr5_3:65378910-65378929 None:intergenic 35.0%
AGCTTAATTCTCAGGATTTG+AGG - chr5_3:65379194-65379213 Msa0825520:intron 35.0%
GTGCAAGCTTACTTATATGA+TGG - chr5_3:65379240-65379259 Msa0825520:intron 35.0%
CTTACTTATATGATGGCTAC+TGG - chr5_3:65379247-65379266 Msa0825520:intron 35.0%
TGCATTATAGAAAGCCTCAA+TGG + chr5_3:65379286-65379305 None:intergenic 35.0%
! CTGCAAAATTTTCCATTCTG+TGG - chr5_3:65379677-65379696 Msa0825520:CDS 35.0%
! AAATTTTCCATTCTGTGGTC+GGG - chr5_3:65379682-65379701 Msa0825520:CDS 35.0%
AGAAAATCAATGTTGCGGTT+AGG + chr5_3:65379920-65379939 None:intergenic 35.0%
! AACTTTTATCAGCTTCTGTC+TGG + chr5_3:65379948-65379967 None:intergenic 35.0%
GTTGACAAGAATGCTAGAAT+TGG - chr5_3:65380033-65380052 Msa0825520:intron 35.0%
GTCAAGCTTAATATGAGAGA+TGG + chr5_3:65380127-65380146 None:intergenic 35.0%
ACATAAAGGGACCAAAGATT+AGG + chr5_3:65380188-65380207 None:intergenic 35.0%
!! TTTTGGTTGTCTCAAGACTT+TGG + chr5_3:65380453-65380472 None:intergenic 35.0%
CAACAAAACATCGCAAAAAG+AGG + chr5_3:65380589-65380608 None:intergenic 35.0%
! CTCTTTTTGCGATGTTTTGT+TGG - chr5_3:65380587-65380606 Msa0825520:intron 35.0%
TTCTAAATGACAGTTCCACT+AGG + chr5_3:65380799-65380818 None:intergenic 35.0%
TCAAAGTCTCACTCAACATT+AGG + chr5_3:65380930-65380949 None:intergenic 35.0%
GATGAAGAAGAAGAACAACG+TGG + chr5_3:65377130-65377149 None:intergenic 40.0%
TTCTCATCATCTCAACTCTC+TGG - chr5_3:65377190-65377209 Msa0825520:three_prime_UTR 40.0%
GAGTAACAATCACATGCTTC+CGG + chr5_3:65377264-65377283 None:intergenic 40.0%
GCATGTGATTGTTACTCCTA+AGG - chr5_3:65377267-65377286 Msa0825520:three_prime_UTR 40.0%
TGTGAATCAGAAACAGCCTT+AGG + chr5_3:65377286-65377305 None:intergenic 40.0%
ACATATACGAACACGGATAC+TGG + chr5_3:65377504-65377523 None:intergenic 40.0%
GTACTTGGCATTATACTTGG+AGG - chr5_3:65377707-65377726 Msa0825520:three_prime_UTR 40.0%
AGTCTATAGTTAGCTCCAAG+AGG + chr5_3:65377788-65377807 None:intergenic 40.0%
CATAAGCACGAGAAAGATGT+CGG + chr5_3:65377895-65377914 None:intergenic 40.0%
! CTTGGTGGCTACAAAAATGA+GGG - chr5_3:65377923-65377942 Msa0825520:three_prime_UTR 40.0%
TGGAACCAATTAGGATTCTC+AGG + chr5_3:65377980-65377999 None:intergenic 40.0%
! TGAGAATCCTAATTGGTTCC+AGG - chr5_3:65377979-65377998 Msa0825520:three_prime_UTR 40.0%
! TCTAGTCTTCAACCTACAAC+CGG - chr5_3:65378254-65378273 Msa0825520:CDS 40.0%
! CTTCATGCAATCCATTTTCC+TGG - chr5_3:65378302-65378321 Msa0825520:intron 40.0%
! CAATCCATTTTCCTGGTGTT+TGG - chr5_3:65378309-65378328 Msa0825520:intron 40.0%
AGATTTGATGTGGTCATTGC+AGG - chr5_3:65378381-65378400 Msa0825520:intron 40.0%
GATTTGATGTGGTCATTGCA+GGG - chr5_3:65378382-65378401 Msa0825520:intron 40.0%
! TTGGAGTACTTAATTCTGGC+CGG - chr5_3:65378457-65378476 Msa0825520:CDS 40.0%
CATTCGATACAAATGGTCAC+CGG + chr5_3:65378479-65378498 None:intergenic 40.0%
AACAGATGCTGATATCACTG+TGG - chr5_3:65378531-65378550 Msa0825520:CDS 40.0%
TCTGATGAAGATCGATGAAG+AGG - chr5_3:65378594-65378613 Msa0825520:intron 40.0%
CTGATGAAGATCGATGAAGA+GGG - chr5_3:65378595-65378614 Msa0825520:intron 40.0%
TGATGAAGATCGATGAAGAG+GGG - chr5_3:65378596-65378615 Msa0825520:intron 40.0%
AGTCATTTGCACCAGGAAAT+TGG + chr5_3:65378857-65378876 None:intergenic 40.0%
TTTCCTGGTGCAAATGACTT+TGG - chr5_3:65378858-65378877 Msa0825520:intron 40.0%
TTCCTGGTGCAAATGACTTT+GGG - chr5_3:65378859-65378878 Msa0825520:intron 40.0%
!! TTTGTTTTTCCCATCGGAAC+TGG - chr5_3:65379071-65379090 Msa0825520:intron 40.0%
! GGTCGATGCTTATGATTTGT+TGG - chr5_3:65379126-65379145 Msa0825520:intron 40.0%
ATTTACCTGAAGTCAGGTAC+AGG + chr5_3:65379330-65379349 None:intergenic 40.0%
!! TGTACTCAATGAGAGCATCT+TGG - chr5_3:65379392-65379411 Msa0825520:CDS 40.0%
CATCTTGGTCATCGTGTTTA+TGG - chr5_3:65379407-65379426 Msa0825520:CDS 40.0%
TATCGCGGTTGAGTGTAAAT+TGG + chr5_3:65379465-65379484 None:intergenic 40.0%
! ACTGATAGTGTTATTGGGGA+AGG - chr5_3:65379519-65379538 Msa0825520:intron 40.0%
! GCGGTTTAAAACTACTTGCA+CGG - chr5_3:65379781-65379800 Msa0825520:CDS 40.0%
GTTAAAGGCAGTGTTCCAAT+TGG - chr5_3:65379976-65379995 Msa0825520:intron 40.0%
GAGTTTCTGCCAATACCAAT+TGG + chr5_3:65379994-65380013 None:intergenic 40.0%
GACCAAAGATTAGGAACAGA+GGG + chr5_3:65380179-65380198 None:intergenic 40.0%
GCTTTGCGTCGAAACATAAA+GGG + chr5_3:65380201-65380220 None:intergenic 40.0%
AGCTTTGCGTCGAAACATAA+AGG + chr5_3:65380202-65380221 None:intergenic 40.0%
CTCTCTATGTCTCTGATCTT+TGG + chr5_3:65380486-65380505 None:intergenic 40.0%
CGGTATCGTCACAATAATCA+AGG - chr5_3:65380762-65380781 Msa0825520:intron 40.0%
AAGGATGCGTTAATTCCTAG+TGG - chr5_3:65380781-65380800 Msa0825520:intron 40.0%
ATGAAAGCCTATCTTAGACG+TGG + chr5_3:65380993-65381012 None:intergenic 40.0%
ATGGCTTCTATGGCTACTAC+TGG - chr5_3:65377091-65377110 Msa0825520:three_prime_UTR 45.0%
TCATATGTTAGTGCCCGTGT+CGG - chr5_3:65377456-65377475 Msa0825520:three_prime_UTR 45.0%
CTTGGCATTATACTTGGAGG+TGG - chr5_3:65377710-65377729 Msa0825520:three_prime_UTR 45.0%
ATTATACTTGGAGGTGGTGC+CGG - chr5_3:65377716-65377735 Msa0825520:three_prime_UTR 45.0%
GAGTGGATATAGACGAGTAC+CGG + chr5_3:65377738-65377757 None:intergenic 45.0%
TTTGCTCTCTTCTTGGTGAG+TGG + chr5_3:65377755-65377774 None:intergenic 45.0%
!!! AGCTGGTTTTGCTCTCTTCT+TGG + chr5_3:65377762-65377781 None:intergenic 45.0%
!! CCTCATTTTTGTAGCCACCA+AGG + chr5_3:65377925-65377944 None:intergenic 45.0%
! CCTTGGTGGCTACAAAAATG+AGG - chr5_3:65377922-65377941 Msa0825520:three_prime_UTR 45.0%
GGATCGAGATTCACTGTAGT+CGG - chr5_3:65378146-65378165 Msa0825520:exon 45.0%
GCTTCCAAACACCAGGAAAA+TGG + chr5_3:65378316-65378335 None:intergenic 45.0%
ATCAACAGCTTCCAAACACC+AGG + chr5_3:65378323-65378342 None:intergenic 45.0%
TGGTGTTTGGAAGCTGTTGA+TGG - chr5_3:65378322-65378341 Msa0825520:intron 45.0%
CGGTGACCATTTGTATCGAA+TGG - chr5_3:65378477-65378496 Msa0825520:CDS 45.0%
CATCTGTTTCCCTATGTGCT+TGG + chr5_3:65378519-65378538 None:intergenic 45.0%
! GAAAAGCGTGCAACTGCTTT+CGG - chr5_3:65378571-65378590 Msa0825520:intron 45.0%
AGACCAGTTGCAAGCTATGA+AGG - chr5_3:65378651-65378670 Msa0825520:intron 45.0%
! TCACCTTCATAGCTTGCAAC+TGG + chr5_3:65378657-65378676 None:intergenic 45.0%
TTTGGGAGTGAAGTGATTCC+TGG - chr5_3:65378876-65378895 Msa0825520:intron 45.0%
!! ATTCCTGGTGCTACTTCCAT+TGG - chr5_3:65378891-65378910 Msa0825520:CDS 45.0%
TTTCCAATGGAAGTAGCACC+AGG + chr5_3:65378897-65378916 None:intergenic 45.0%
AAAAGTCAGCCAGTTCCGAT+GGG + chr5_3:65379083-65379102 None:intergenic 45.0%
AAAAAGTCAGCCAGTTCCGA+TGG + chr5_3:65379084-65379103 None:intergenic 45.0%
GGAAGACATTGGTACCATTG+AGG - chr5_3:65379269-65379288 Msa0825520:intron 45.0%
! GAAGTCAGGTACAGGCTTTT+TGG + chr5_3:65379322-65379341 None:intergenic 45.0%
AAAAGCCTGTACCTGACTTC+AGG - chr5_3:65379322-65379341 Msa0825520:CDS 45.0%
TTCGATGGAGGCAAATATCG+CGG + chr5_3:65379480-65379499 None:intergenic 45.0%
TCAGCATCAAGCATCTTCGA+TGG + chr5_3:65379495-65379514 None:intergenic 45.0%
TGGGGAAGGATGTGTGATTA+AGG - chr5_3:65379533-65379552 Msa0825520:intron 45.0%
GGCAGTGTTCCAATTGGTAT+TGG - chr5_3:65379982-65380001 Msa0825520:intron 45.0%
GAACAGAGGGAGTAGATGAT+AGG + chr5_3:65380166-65380185 None:intergenic 45.0%
CTCCCTCTGTTCCTAATCTT+TGG - chr5_3:65380174-65380193 Msa0825520:intron 45.0%
GGACCAAAGATTAGGAACAG+AGG + chr5_3:65380180-65380199 None:intergenic 45.0%
GAAGCTGCAAGAGAAACAGA+AGG - chr5_3:65380724-65380743 Msa0825520:intron 45.0%
! TCTGCTTCCACGTCTAAGAT+AGG - chr5_3:65380983-65381002 Msa0825520:CDS 45.0%
!! GTTACAGTTTCTGGTGGTGC+AGG - chr5_3:65377223-65377242 Msa0825520:three_prime_UTR 50.0%
CAGGAAGAGGAAGATGCATC+CGG - chr5_3:65377242-65377261 Msa0825520:three_prime_UTR 50.0%
AAACTCACTCTGCTAGCGTC+AGG + chr5_3:65377331-65377350 None:intergenic 50.0%
GCAAAACCAGCTGTTCCTCT+TGG - chr5_3:65377770-65377789 Msa0825520:three_prime_UTR 50.0%
TTAGCTCCAAGAGGAACAGC+TGG + chr5_3:65377779-65377798 None:intergenic 50.0%
CGTGCTTATGCAAGCAACCT+TGG - chr5_3:65377905-65377924 Msa0825520:three_prime_UTR 50.0%
GCTTATGCAAGCAACCTTGG+TGG - chr5_3:65377908-65377927 Msa0825520:three_prime_UTR 50.0%
! GTTGCACGCTTTTCGTCCAT+TGG + chr5_3:65378565-65378584 None:intergenic 50.0%
!! GCTTGCAACTGGTCTCCTTT+TGG + chr5_3:65378646-65378665 None:intergenic 50.0%
TTGCTTCGCGACCAATTTCC+TGG - chr5_3:65378843-65378862 Msa0825520:intron 50.0%
CTCCCAAAGTCATTTGCACC+AGG + chr5_3:65378864-65378883 None:intergenic 50.0%
GATGGCTACTGGGAAGACAT+TGG - chr5_3:65379258-65379277 Msa0825520:intron 50.0%
GCATCAAGCATCTTCGATGG+AGG + chr5_3:65379492-65379511 None:intergenic 50.0%
CTGCGGTCTTGCATATCAGA+AGG - chr5_3:65379705-65379724 Msa0825520:CDS 50.0%
! AGACACTTTGTTGATGGGCG+CGG - chr5_3:65379740-65379759 Msa0825520:CDS 50.0%
! GATGGGCGCGGATTATTATG+AGG - chr5_3:65379752-65379771 Msa0825520:CDS 50.0%
!! GTTTCTGGTGGTGCAGGAAG+AGG - chr5_3:65377229-65377248 Msa0825520:three_prime_UTR 55.0%
CTCTGCTAGCGTCAGGATCA+AGG + chr5_3:65377324-65377343 None:intergenic 55.0%
GAACACTGACACACCGACAC+GGG + chr5_3:65377472-65377491 None:intergenic 55.0%
CGAACACTGACACACCGACA+CGG + chr5_3:65377473-65377492 None:intergenic 55.0%
!! AGGGTACTGCAGATGCTGTG+AGG - chr5_3:65378401-65378420 Msa0825520:intron 55.0%
CACTGTGGCTGCATTGCCAA+TGG - chr5_3:65378546-65378565 Msa0825520:intron 55.0%
TCCATTCTGTGGTCGGGCTG+CGG - chr5_3:65379688-65379707 Msa0825520:CDS 60.0%
ACCGCAGCCCGACCACAGAA+TGG + chr5_3:65379692-65379711 None:intergenic 65.0%
Chromosome Type Strat End Strand Name
chr5_3 gene 65376993 65381235 65376993 ID=Msa0825520;Name=Msa0825520
chr5_3 mRNA 65376993 65381235 65376993 ID=Msa0825520-mRNA-1;Parent=Msa0825520;Name=Msa0825520-mRNA-1;_AED=0.06;_eAED=0.06;_QI=98|1|1|1|1|1|8|1158|480
chr5_3 exon 65376993 65378279 65376993 ID=Msa0825520-mRNA-1:exon:20492;Parent=Msa0825520-mRNA-1
chr5_3 exon 65378455 65378553 65378455 ID=Msa0825520-mRNA-1:exon:20491;Parent=Msa0825520-mRNA-1
chr5_3 exon 65378674 65378785 65378674 ID=Msa0825520-mRNA-1:exon:20490;Parent=Msa0825520-mRNA-1
chr5_3 exon 65378885 65378988 65378885 ID=Msa0825520-mRNA-1:exon:20489;Parent=Msa0825520-mRNA-1
chr5_3 exon 65379308 65379487 65379308 ID=Msa0825520-mRNA-1:exon:20488;Parent=Msa0825520-mRNA-1
chr5_3 exon 65379556 65379825 65379556 ID=Msa0825520-mRNA-1:exon:20487;Parent=Msa0825520-mRNA-1
chr5_3 exon 65380228 65380524 65380228 ID=Msa0825520-mRNA-1:exon:20486;Parent=Msa0825520-mRNA-1
chr5_3 exon 65380886 65381235 65380886 ID=Msa0825520-mRNA-1:exon:20485;Parent=Msa0825520-mRNA-1
chr5_3 five_prime_UTR 65381138 65381235 65381138 ID=Msa0825520-mRNA-1:five_prime_utr;Parent=Msa0825520-mRNA-1
chr5_3 CDS 65380886 65381137 65380886 ID=Msa0825520-mRNA-1:cds;Parent=Msa0825520-mRNA-1
chr5_3 CDS 65380228 65380524 65380228 ID=Msa0825520-mRNA-1:cds;Parent=Msa0825520-mRNA-1
chr5_3 CDS 65379556 65379825 65379556 ID=Msa0825520-mRNA-1:cds;Parent=Msa0825520-mRNA-1
chr5_3 CDS 65379308 65379487 65379308 ID=Msa0825520-mRNA-1:cds;Parent=Msa0825520-mRNA-1
chr5_3 CDS 65378885 65378988 65378885 ID=Msa0825520-mRNA-1:cds;Parent=Msa0825520-mRNA-1
chr5_3 CDS 65378674 65378785 65378674 ID=Msa0825520-mRNA-1:cds;Parent=Msa0825520-mRNA-1
chr5_3 CDS 65378455 65378553 65378455 ID=Msa0825520-mRNA-1:cds;Parent=Msa0825520-mRNA-1
chr5_3 CDS 65378151 65378279 65378151 ID=Msa0825520-mRNA-1:cds;Parent=Msa0825520-mRNA-1
chr5_3 three_prime_UTR 65376993 65378150 65376993 ID=Msa0825520-mRNA-1:three_prime_utr;Parent=Msa0825520-mRNA-1
Gene Sequence

>Msa0825520

ATGGCTTCTATGGCTACTACTGGTGTTATCAAAGTACCACGTTGTTCTTCTTCTTCATCATCAAATGTAAGAAACAAAGTCATTCAAAGAAGTCTTTCATTCTCATCATCTCAACTCTCTGGAGACAAGATTGTTACAGTTTCTGGTGGTGCAGGAAGAGGAAGATGCATCCGGAAGCATGTGATTGTTACTCCTAAGGCTGTTTCTGATTCACAGAATTCTCAGACTTGCCTTGATCCTGACGCTAGCAGAAGTGTACTTGGCATTATACTTGGAGGTGGTGCCGGTACTCGTCTATATCCACTCACCAAGAAGAGAGCAAAACCAGCTGTTCCTCTTGGAGCTAACTATAGACTCATTGATATTCCTGTTAGCAACTGCTTAAATAGCAACATATCTAAGATCTATGTTCTTACTCAATTCAATTCTGCGTCTCTCAACCGACATCTTTCTCGTGCTTATGCAAGCAACCTTGGTGGCTACAAAAATGAGGGTTTTGTTGAGGTTCTTGCTGCTCAGCAAAGTCCTGAGAATCCTAATTGGTTCCAGGGTACTGCAGATGCTGTGAGGCAATATTTATGGCTTTTTGAAGAGCACAATGTTTTGGAGTACTTAATTCTGGCCGGTGACCATTTGTATCGAATGGATTACGAGAAATTTATCCAAGCACATAGGGAAACAGATGCTGATATCACTGTGGCTGCATTGCCAATGGACGAAAAGCGTGCAACTGCTTTCGGTCTGATGAAGATCGATGAAGAGGGGCGTATAATTGAATTTTCAGAAAAGCCAAAAGGAGACCAGTTGCAAGCTATGAAGGTCGATACTACCATTTTGGGTCTTGATGATGAAAGAGCAAAGGAAATGCCTTTTATTGCTAGCATGGGTATATATGTTATCAGCAAAAATGTGATGTTAGACTTGCTTCGCGACCAATTTCCTGGTGCAAATGACTTTGGGAGTGAAGTGATTCCTGGTGCTACTTCCATTGGAAAGAGAGTGCAAGCTTACTTATATGATGGCTACTGGGAAGACATTGGTACCATTGAGGCTTTCTATAATGCAAATCTCGGAATCACCAAAAAGCCTGTACCTGACTTCAGTTTCTATGATCGTTCATCTCCAATTTACACTCAACCGCGATATTTGCCTCCATCGAAGATGCTTGATGCTGATATCACTGATAGTGTTATTGGGGAAGGATGTGTGATTAAGAACTGCAAAATTTTCCATTCTGTGGTCGGGCTGCGGTCTTGCATATCAGAAGGTGCAATTATTGAAGACACTTTGTTGATGGGCGCGGATTATTATGAGACAGAAGCTGATAAAAGTTTTTTGGCTGTTAAAGGCAGTGTTCCAATTGGTATTGGCAGAAACTCCCATATCAAAAGAGCAATTGTTGACAAGAATGCTAGAATTGGAGAAAATGTGAAGGTTATATAA

Protein sequence

>Msa0825520

MASMATTGVIKVPRCSSSSSSNVRNKVIQRSLSFSSSQLSGDKIVTVSGGAGRGRCIRKHVIVTPKAVSDSQNSQTCLDPDASRSVLGIILGGGAGTRLYPLTKKRAKPAVPLGANYRLIDIPVSNCLNSNISKIYVLTQFNSASLNRHLSRAYASNLGGYKNEGFVEVLAAQQSPENPNWFQGTADAVRQYLWLFEEHNVLEYLILAGDHLYRMDYEKFIQAHRETDADITVAALPMDEKRATAFGLMKIDEEGRIIEFSEKPKGDQLQAMKVDTTILGLDDERAKEMPFIASMGIYVISKNVMLDLLRDQFPGANDFGSEVIPGATSIGKRVQAYLYDGYWEDIGTIEAFYNANLGITKKPVPDFSFYDRSSPIYTQPRYLPPSKMLDADITDSVIGEGCVIKNCKIFHSVVGLRSCISEGAIIEDTLLMGADYYETEADKSFLAVKGSVPIGIGRNSHIKRAIVDKNARIGENVKVI*