AlfalfaGEDB Alfalfa Gene Editing Database

M. sativa cultivar zhongmu-4 / Msa0565860

Query id Subject id identity % alignment length mismatches gap openings q. start q. end s. start s. end e-value bit score
Msa0565860 MtrunA17_Chr8g0380471 96.660 479 16 0 1 479 1 479 0.0 961
Msa0565860 MtrunA17_Chr8g0388921 53.518 469 214 2 11 475 8 476 0.0 520
Msa0565860 MtrunA17_Chr8g0380931 38.661 463 265 9 22 474 50 503 2.24e-112 341
Msa0565860 MtrunA17_Chr5g0443731 38.288 444 270 4 34 475 29 470 1.35e-108 330
Msa0565860 MtrunA17_Chr5g0443401 36.831 486 288 9 3 477 1 478 9.30e-106 323
Msa0565860 MtrunA17_Chr3g0107511 37.421 473 283 8 11 475 9 476 1.97e-104 320
Msa0565860 MtrunA17_Chr3g0107501 36.484 455 277 6 28 475 27 476 1.35e-101 312
Msa0565860 MtrunA17_Chr8g0369791 33.125 480 296 13 1 473 1 462 8.84e-78 250
Msa0565860 MtrunA17_Chr5g0403931 33.333 477 298 12 9 474 11 478 6.60e-77 248
Msa0565860 MtrunA17_Chr7g0226771 32.305 486 308 11 1 479 2 473 1.13e-75 245
Msa0565860 MtrunA17_Chr5g0408181 32.573 482 298 14 1 475 1 462 1.35e-72 237
Msa0565860 MtrunA17_Chr4g0044851 30.512 449 295 9 29 473 32 467 5.77e-66 219
Msa0565860 MtrunA17_Chr5g0397971 27.208 419 295 6 34 448 31 443 3.81e-61 207
Msa0565860 MtrunA17_Chr1g0153371 28.662 471 321 7 8 472 4 465 1.65e-60 205
Msa0565860 MtrunA17_Chr5g0400421 29.314 481 324 10 6 473 10 487 3.32e-60 205
Msa0565860 MtrunA17_Chr3g0113321 29.978 457 297 15 25 471 20 463 1.25e-59 203
Msa0565860 MtrunA17_Chr8g0341951 28.194 454 307 11 4 448 3 446 1.05e-58 200
Msa0565860 MtrunA17_Chr8g0372411 27.865 445 302 9 35 471 40 473 2.00e-58 200
Msa0565860 MtrunA17_Chr4g0044841 29.241 448 299 10 31 473 35 469 1.30e-57 197
Msa0565860 MtrunA17_Chr3g0141801 28.509 456 303 11 30 473 37 481 1.42e-57 198
Msa0565860 MtrunA17_Chr3g0078411 27.536 483 305 13 11 474 6 462 6.32e-56 193
Msa0565860 MtrunA17_Chr7g0219961 29.193 483 306 17 6 474 1 461 7.38e-56 192
Msa0565860 MtrunA17_Chr1g0164371 29.828 466 311 9 12 473 20 473 7.64e-56 193
Msa0565860 MtrunA17_Chr2g0293411 27.859 481 333 6 7 474 6 485 4.81e-55 191
Msa0565860 MtrunA17_Chr8g0373441 31.750 400 258 10 14 406 13 404 1.69e-54 188
Msa0565860 MtrunA17_Chr6g0455461 27.122 483 307 12 11 474 6 462 2.51e-54 189
Msa0565860 MtrunA17_Chr8g0381541 26.160 474 336 7 7 467 8 480 9.50e-53 185
Msa0565860 MtrunA17_Chr8g0372711 28.330 473 318 8 12 474 22 483 1.25e-52 185
Msa0565860 MtrunA17_Chr2g0293421 26.974 456 328 5 27 479 38 491 6.47e-52 182
Msa0565860 MtrunA17_Chr8g0339861 27.765 443 311 7 30 468 41 478 9.06e-51 179
Msa0565860 MtrunA17_Chr8g0381571 26.846 447 313 7 7 440 8 453 9.66e-51 179
Msa0565860 MtrunA17_Chr5g0400411 28.333 480 329 9 6 473 10 486 2.82e-49 176
Msa0565860 MtrunA17_Chr6g0478161 24.793 484 333 11 12 477 21 491 5.11e-47 169
Msa0565860 MtrunA17_Chr3g0089361 26.126 444 317 7 34 474 40 475 5.53e-45 164
Msa0565860 MtrunA17_Chr3g0089351 26.119 402 287 7 74 474 1 393 1.54e-42 155
Msa0565860 MtrunA17_Chr5g0404861 36.552 145 88 2 333 475 16 158 2.36e-26 104
Msa0565860 MtrunA17_Chr0c19g0493771 31.937 191 120 3 268 452 436 622 3.96e-25 108
Msa0565860 MtrunA17_Chr8g0381551 24.375 320 229 6 7 314 8 326 6.37e-24 102
Msa0565860 MtrunA17_Chr8g0354531 26.382 398 234 16 116 474 266 643 2.03e-23 103
Msa0565860 MtrunA17_Chr8g0334891 23.991 446 305 9 26 453 30 459 1.02e-22 100
Msa0565860 MtrunA17_Chr2g0313821 27.027 370 232 12 110 450 129 489 3.07e-22 99.8
Msa0565860 MtrunA17_Chr6g0463541 39.423 104 62 1 368 471 3 105 9.46e-22 90.1
Msa0565860 MtrunA17_Chr7g0260821 22.934 484 300 19 40 474 42 501 2.12e-21 97.1
Msa0565860 MtrunA17_Chr2g0307291 25.385 390 254 11 114 474 135 516 1.51e-20 94.4
Msa0565860 MtrunA17_Chr5g0437001 38.889 108 63 2 339 443 1 108 3.77e-20 87.4
Msa0565860 MtrunA17_Chr8g0334941 26.224 286 184 7 184 453 30 304 5.00e-20 91.3
Msa0565860 MtrunA17_Chr1g0179811 27.138 269 169 7 224 474 278 537 5.25e-20 92.8
Msa0565860 MtrunA17_Chr2g0307301 24.938 401 238 11 114 477 135 509 8.18e-20 92.4
Msa0565860 MtrunA17_Chr1g0198191 24.609 512 295 19 11 464 21 499 1.16e-19 91.7
Msa0565860 MtrunA17_Chr6g0457421 28.102 274 173 10 216 475 243 506 1.63e-19 91.3
Msa0565860 MtrunA17_Chr3g0128461 29.297 256 159 9 230 474 278 522 1.92e-19 91.3
Msa0565860 MtrunA17_Chr7g0260831 21.849 476 313 18 40 473 41 499 2.38e-19 90.9
Msa0565860 MtrunA17_Chr5g0401691 28.571 224 148 4 234 448 256 476 2.51e-19 90.9
Msa0565860 MtrunA17_Chr2g0313791 27.875 287 168 10 215 474 235 509 2.70e-19 90.5
Msa0565860 MtrunA17_Chr4g0056951 31.674 221 137 7 237 448 262 477 2.80e-19 90.5
Msa0565860 MtrunA17_Chr7g0215181 25.641 273 184 7 215 475 243 508 3.07e-19 90.5
Msa0565860 MtrunA17_Chr8g0336361 25.826 333 173 12 199 473 239 555 4.93e-19 90.1
Msa0565860 MtrunA17_Chr2g0286091 23.176 466 319 13 30 467 37 491 5.69e-19 89.7
Msa0565860 MtrunA17_Chr1g0203151 27.170 265 169 8 224 475 257 510 6.68e-19 89.4
Msa0565860 MtrunA17_Chr6g0472221 28.626 262 165 8 227 475 273 525 6.93e-19 89.4
Msa0565860 MtrunA17_Chr1g0203141 26.415 265 171 8 224 475 261 514 7.15e-19 89.4
Msa0565860 MtrunA17_Chr5g0404881 27.536 207 140 6 27 228 28 229 1.29e-18 85.1
Msa0565860 MtrunA17_Chr4g0000151 35.514 107 69 0 359 465 25 131 1.53e-18 82.4
Msa0565860 MtrunA17_Chr8g0354571 26.173 405 237 16 111 474 139 522 1.97e-18 88.2
Msa0565860 MtrunA17_Chr4g0000171 24.028 283 210 4 28 308 37 316 3.09e-18 85.9
Msa0565860 MtrunA17_Chr3g0089381 28.646 192 131 4 179 369 4 190 4.24e-18 83.2
Msa0565860 MtrunA17_Chr2g0288661 23.724 392 258 11 114 474 135 516 1.02e-17 85.9
Msa0565860 MtrunA17_Chr1g0161671 22.924 301 228 4 17 314 12 311 1.17e-17 84.0
Msa0565860 MtrunA17_Chr2g0313751 25.995 377 219 11 114 450 160 516 1.52e-17 85.5
Msa0565860 MtrunA17_Chr5g0429651 26.408 284 180 10 217 475 228 507 1.70e-17 85.1
Msa0565860 MtrunA17_Chr1g0160861 32.370 173 109 4 283 450 137 306 1.80e-17 83.6
Msa0565860 MtrunA17_Chr1g0160851 32.164 171 108 4 285 450 298 465 4.05e-17 84.0
Msa0565860 MtrunA17_Chr4g0000161 25.524 286 206 5 26 308 35 316 4.51e-17 82.4
Msa0565860 MtrunA17_Chr7g0235261 26.761 284 173 10 209 473 240 507 6.22e-17 83.2
Msa0565860 MtrunA17_Chr2g0313761 25.333 375 224 10 114 450 128 484 6.98e-17 83.2
Msa0565860 MtrunA17_Chr2g0313781 26.172 256 163 7 215 450 252 501 8.51e-17 82.8
Msa0565860 MtrunA17_Chr4g0057001 29.412 221 145 7 237 450 268 484 1.68e-16 82.0
Msa0565860 MtrunA17_Chr4g0035921 28.571 175 115 3 282 450 311 481 1.75e-16 82.0
Msa0565860 MtrunA17_Chr2g0313831 25.445 393 250 14 114 474 133 514 1.92e-16 81.6
Msa0565860 MtrunA17_Chr2g0313801 23.836 365 242 10 114 450 133 489 2.52e-16 81.6
Msa0565860 MtrunA17_Chr4g0004601 25.763 295 181 9 203 473 248 528 2.95e-16 81.3
Msa0565860 MtrunA17_Chr8g0381561 30.909 110 76 0 338 447 2 111 3.09e-16 75.1
Msa0565860 MtrunA17_Chr1g0193811 26.354 277 178 9 217 475 247 515 3.86e-16 80.9
Msa0565860 MtrunA17_Chr4g0014051 24.808 391 250 13 114 477 146 519 5.08e-16 80.5
Msa0565860 MtrunA17_Chr4g0053621 26.761 213 150 5 245 455 262 470 5.28e-16 80.5
Msa0565860 MtrunA17_Chr8g0354511 25.266 376 228 12 111 450 139 497 5.40e-16 80.5
Msa0565860 MtrunA17_Chr1g0184421 26.667 255 150 9 227 466 252 484 6.43e-16 80.1
Msa0565860 MtrunA17_Chr5g0431511 26.515 264 175 7 198 450 215 470 8.26e-16 79.7
Msa0565860 MtrunA17_Chr6g0463551 30.380 158 98 3 217 367 33 185 9.01e-16 75.9
Msa0565860 MtrunA17_Chr4g0011851 30.811 185 114 5 283 460 14 191 1.07e-15 76.3
Msa0565860 MtrunA17_Chr8g0346261 26.549 226 150 5 231 448 296 513 1.54e-15 79.0
Msa0565860 MtrunA17_Chr4g0038271 26.016 246 165 6 221 451 291 534 2.16e-15 78.6
Msa0565860 MtrunA17_Chr5g0403321 30.455 220 134 7 241 450 264 474 2.26e-15 78.6
Msa0565860 MtrunA17_Chr5g0401681 27.919 197 133 5 255 448 269 459 2.49e-15 78.2
Msa0565860 MtrunA17_Chr5g0436981 32.374 139 90 4 30 166 24 160 2.49e-15 74.3
Msa0565860 MtrunA17_Chr2g0280081 29.412 187 123 3 271 448 787 973 2.99e-15 79.0
Msa0565860 MtrunA17_Chr2g0280081 28.079 203 132 4 271 459 286 488 3.79e-12 68.9
Msa0565860 MtrunA17_Chr8g0362731 27.397 219 137 6 268 477 194 399 3.59e-15 77.4
Msa0565860 MtrunA17_Chr1g0184461 26.295 251 156 8 227 466 252 484 3.88e-15 77.8
Msa0565860 MtrunA17_Chr2g0280011 29.651 172 112 3 286 448 9 180 3.93e-15 74.3
Msa0565860 MtrunA17_Chr2g0314731 24.793 363 226 9 117 473 162 483 4.80e-15 77.4
Msa0565860 MtrunA17_Chr8g0339331 25.379 264 171 9 224 473 249 500 4.86e-15 77.4
Msa0565860 MtrunA17_Chr1g0204271 25.828 302 191 11 197 471 206 501 5.33e-15 77.4
Msa0565860 MtrunA17_Chr8g0339311 26.459 257 161 7 242 476 279 529 5.42e-15 77.4
Msa0565860 MtrunA17_Chr6g0458561 30.000 200 123 5 281 473 324 513 5.46e-15 77.4
Msa0565860 MtrunA17_Chr3g0104351 23.773 387 253 13 108 458 116 496 5.85e-15 77.4
Msa0565860 MtrunA17_Chr2g0313771 23.715 506 302 18 6 450 14 496 6.84e-15 77.0
Msa0565860 MtrunA17_Chr5g0403331 30.233 172 110 4 285 450 305 472 7.50e-15 77.0
Msa0565860 MtrunA17_Chr7g0235551 27.049 244 161 6 223 456 244 480 8.36e-15 76.6
Msa0565860 MtrunA17_Chr1g0174441 26.953 256 167 6 211 450 246 497 8.67e-15 76.6
Msa0565860 MtrunA17_Chr5g0446131 25.000 372 229 11 114 450 131 487 1.12e-14 76.3
Msa0565860 MtrunA17_Chr1g0176831 25.862 232 159 4 248 474 291 514 1.15e-14 76.3
Msa0565860 MtrunA17_Chr4g0039391 27.004 237 155 6 234 455 242 475 1.18e-14 76.3
Msa0565860 MtrunA17_Chr8g0364651 26.577 222 152 4 241 454 254 472 1.27e-14 76.3
Msa0565860 MtrunA17_Chr8g0373431 47.541 61 31 1 414 474 5 64 1.47e-14 68.6
Msa0565860 MtrunA17_Chr2g0313811 25.161 310 199 10 165 450 201 501 1.59e-14 75.9
Msa0565860 MtrunA17_Chr5g0403351 25.792 221 146 6 241 450 258 471 1.77e-14 75.5
Msa0565860 MtrunA17_Chr1g0205361 30.409 171 111 3 285 450 298 465 2.47e-14 75.1
Msa0565860 MtrunA17_Chr2g0296651 27.805 205 143 4 248 451 262 462 2.56e-14 75.1
Msa0565860 MtrunA17_Chr1g0174481 27.686 242 156 6 222 450 235 470 2.97e-14 75.1
Msa0565860 MtrunA17_Chr3g0101611 26.756 299 194 10 174 451 178 472 3.24e-14 74.7
Msa0565860 MtrunA17_Chr1g0156101 27.344 256 164 8 213 450 228 479 4.93e-14 74.3
Msa0565860 MtrunA17_Chr1g0164321 24.896 241 160 4 228 451 285 521 5.34e-14 74.3
Msa0565860 MtrunA17_Chr1g0174461 26.389 216 145 6 240 447 263 472 5.50e-14 74.3
Msa0565860 MtrunA17_Chr1g0174451 25.581 258 174 4 207 450 223 476 5.92e-14 73.9
Msa0565860 MtrunA17_Chr2g0314721 26.407 231 157 5 248 473 272 494 6.16e-14 73.9
Msa0565860 MtrunA17_Chr8g0351421 26.190 252 167 7 241 475 260 509 6.73e-14 73.9
Msa0565860 MtrunA17_Chr8g0362481 27.459 244 159 7 222 450 166 406 7.10e-14 73.6
Msa0565860 MtrunA17_Chr4g0011961 29.825 171 112 3 285 450 296 463 7.10e-14 73.9
Msa0565860 MtrunA17_Chr7g0265611 26.754 228 149 5 235 450 264 485 7.10e-14 73.9
Msa0565860 MtrunA17_Chr2g0280071 28.042 189 127 3 271 450 319 507 7.91e-14 73.9
Msa0565860 MtrunA17_Chr4g0020041 26.446 242 156 7 221 450 239 470 8.55e-14 73.6
Msa0565860 MtrunA17_Chr4g0013471 23.729 295 213 7 34 325 43 328 8.77e-14 73.2
Msa0565860 MtrunA17_Chr4g0063221 26.354 277 178 9 215 471 244 514 1.06e-13 73.2
Msa0565860 MtrunA17_Chr6g0463621 29.609 179 112 4 286 455 1 174 1.21e-13 69.7
Msa0565860 MtrunA17_Chr4g0026941 25.287 261 176 8 221 473 287 536 1.58e-13 72.8
Msa0565860 MtrunA17_Chr4g0052861 27.155 232 157 6 232 456 240 466 1.70e-13 72.4
Msa0565860 MtrunA17_Chr4g0011901 27.530 247 163 7 221 460 235 472 1.77e-13 72.4
Msa0565860 MtrunA17_Chr2g0280121 28.125 224 144 6 266 475 288 508 1.84e-13 72.4
Msa0565860 MtrunA17_Chr5g0446161 27.962 211 137 4 250 450 263 468 2.05e-13 72.4
Msa0565860 MtrunA17_Chr8g0351461 25.296 253 168 8 241 475 259 508 2.58e-13 72.0
Msa0565860 MtrunA17_Chr7g0248991 30.345 145 97 2 268 412 218 358 3.68e-13 70.9
Msa0565860 MtrunA17_Chr1g0161661 35.443 79 51 0 387 465 11 89 3.75e-13 65.5
Msa0565860 MtrunA17_Chr7g0255131 26.446 242 157 8 249 474 270 506 4.00e-13 71.6
Msa0565860 MtrunA17_Chr5g0396521 25.792 221 119 6 267 450 330 542 4.02e-13 71.6
Msa0565860 MtrunA17_Chr6g0451781 28.936 235 146 9 224 441 291 521 4.43e-13 71.6
Msa0565860 MtrunA17_Chr3g0101731 24.691 243 171 6 217 450 230 469 5.58e-13 70.9
Msa0565860 MtrunA17_Chr4g0058281 25.926 216 152 3 240 450 269 481 5.64e-13 70.9
Msa0565860 MtrunA17_Chr6g0451811 30.636 173 102 7 282 441 2 169 5.80e-13 68.2
Msa0565860 MtrunA17_Chr8g0351441 25.296 253 168 8 241 475 259 508 6.64e-13 70.9
Msa0565860 MtrunA17_Chr6g0463791 30.114 176 110 3 288 455 300 470 7.35e-13 70.5
Msa0565860 MtrunA17_Chr8g0362701 26.277 274 180 8 217 475 230 496 7.96e-13 70.5
Msa0565860 MtrunA17_Chr1g0162811 28.324 173 117 2 282 450 299 468 8.27e-13 70.5
Msa0565860 MtrunA17_Chr1g0174431 29.379 177 111 4 285 450 1 174 9.05e-13 67.4
Msa0565860 MtrunA17_Chr8g0372251 24.454 229 148 6 239 450 253 473 1.13e-12 70.1
Msa0565860 MtrunA17_Chr8g0387001 26.104 249 145 8 227 451 246 479 1.22e-12 70.1
Msa0565860 MtrunA17_Chr5g0419691 30.857 175 111 4 300 469 312 481 1.37e-12 69.7
Msa0565860 MtrunA17_Chr8g0351801 28.022 182 114 3 283 450 308 486 1.43e-12 69.7
Msa0565860 MtrunA17_Chr7g0258211 26.630 184 113 3 283 450 303 480 1.47e-12 69.7
Msa0565860 MtrunA17_Chr5g0405001 24.506 253 163 6 220 454 241 483 1.64e-12 69.7
Msa0565860 MtrunA17_Chr4g0046331 27.374 179 112 5 288 453 304 477 1.72e-12 69.3
Msa0565860 MtrunA17_Chr7g0218601 26.996 263 161 10 220 470 239 482 1.73e-12 69.3
Msa0565860 MtrunA17_Chr6g0463801 28.718 195 125 5 264 450 277 465 2.96e-12 68.6
Msa0565860 MtrunA17_Chr4g0011941 29.240 171 113 4 285 450 1 168 3.08e-12 65.9
Msa0565860 MtrunA17_Chr1g0174471 27.397 219 146 4 240 450 278 491 3.39e-12 68.6
Msa0565860 MtrunA17_Chr5g0409051 27.179 195 122 5 269 450 292 479 3.85e-12 68.6
Msa0565860 MtrunA17_Chr5g0400391 33.333 84 56 0 389 472 1 84 3.89e-12 62.8
Msa0565860 MtrunA17_Chr2g0296661 29.016 193 132 4 258 449 277 465 5.69e-12 67.8
Msa0565860 MtrunA17_Chr6g0451741 30.303 231 138 10 224 438 279 502 6.61e-12 67.8
Msa0565860 MtrunA17_Chr8g0387101 27.225 191 129 3 271 451 287 477 7.09e-12 67.4
Msa0565860 MtrunA17_Chr1g0161641 34.211 76 50 0 372 447 13 88 1.17e-11 60.8
Msa0565860 MtrunA17_Chr6g0466941 27.778 216 137 8 241 441 271 482 1.39e-11 66.6
Msa0565860 MtrunA17_Chr5g0445531 25.368 272 183 8 195 450 200 467 1.46e-11 66.6
Msa0565860 MtrunA17_Chr4g0046321 27.119 177 113 5 288 453 304 475 1.67e-11 66.2
Msa0565860 MtrunA17_Chr4g0052881 27.136 199 140 3 251 448 266 460 1.67e-11 66.2
Msa0565860 MtrunA17_Chr7g0218611 24.370 238 166 5 219 449 237 467 1.80e-11 66.2
Msa0565860 MtrunA17_Chr3g0101721 27.311 238 159 7 221 450 240 471 1.84e-11 66.2
Msa0565860 MtrunA17_Chr4g0046351 26.257 179 116 5 288 455 304 477 1.87e-11 66.2
Msa0565860 MtrunA17_Chr8g0348751 23.954 263 173 10 232 473 251 507 2.03e-11 66.2
Msa0565860 MtrunA17_Chr8g0354541 29.508 183 113 6 301 474 1 176 2.07e-11 62.8
Msa0565860 MtrunA17_Chr1g0205371 32.164 171 108 3 285 450 299 466 4.07e-11 65.1
Msa0565860 MtrunA17_Chr3g0101691 25.000 240 166 5 221 450 238 473 4.30e-11 65.1
Msa0565860 MtrunA17_Chr8g0382901 27.966 236 155 8 224 450 214 443 4.40e-11 65.5
Msa0565860 MtrunA17_Chr2g0280041 28.042 189 127 3 271 450 318 506 7.02e-11 64.3
Query id Subject id identity % alignment length mismatches gap openings q. start q. end s. start s. end e-value bit score
Msa0565860 AT5G36110.1 48.546 447 222 3 33 475 33 475 2.16e-151 440
Msa0565860 AT5G36110.2 45.014 351 186 2 33 380 33 379 1.08e-101 310
Msa0565860 AT2G42850.1 35.590 458 282 8 22 475 34 482 7.15e-92 288
Msa0565860 AT5G45340.1 34.801 477 291 10 1 474 1 460 3.24e-90 283
Msa0565860 AT4G19230.1 32.773 476 300 9 1 473 1 459 6.67e-83 264
Msa0565860 AT5G45340.2 34.222 450 276 10 1 447 1 433 8.80e-80 255
Msa0565860 AT5G36140.1 41.901 284 161 1 33 316 32 311 1.22e-77 246
Msa0565860 AT4G19230.2 32.151 451 286 9 1 448 1 434 5.39e-74 241
Msa0565860 AT3G19270.2 32.043 465 298 9 12 470 8 460 6.55e-73 238
Msa0565860 AT2G29090.2 29.933 451 301 8 28 475 43 481 3.26e-70 231
Msa0565860 AT2G29090.1 29.933 451 301 8 28 475 43 481 3.26e-70 231
Msa0565860 AT3G50660.1 31.677 483 281 11 31 473 36 509 2.04e-69 230
Msa0565860 AT3G19270.1 31.828 443 284 9 12 448 8 438 1.89e-66 220
Msa0565860 AT1G12740.1 27.865 445 310 8 34 474 31 468 6.93e-64 214
Msa0565860 AT1G12740.4 27.494 451 310 9 34 474 31 474 1.47e-61 208
Msa0565860 AT4G36380.1 29.372 446 304 8 34 473 69 509 2.35e-61 209
Msa0565860 AT1G12740.2 27.273 451 311 9 34 474 31 474 4.65e-61 207
Msa0565860 AT2G29090.3 32.081 346 226 5 132 475 48 386 1.27e-60 203
Msa0565860 AT5G05690.1 29.911 448 293 11 32 471 29 463 4.09e-59 202
Msa0565860 AT2G32440.2 28.632 475 321 8 12 473 15 484 1.08e-58 201
Msa0565860 AT2G32440.1 28.632 475 321 8 12 473 15 484 1.08e-58 201
Msa0565860 AT1G19630.1 26.964 471 336 8 7 474 8 473 6.55e-57 196
Msa0565860 AT3G13730.1 27.928 444 304 9 35 471 52 486 5.68e-56 194
Msa0565860 AT5G36130.1 59.420 138 55 1 339 475 1 138 5.84e-56 183
Msa0565860 AT5G14400.2 28.859 447 282 10 39 478 1 418 1.16e-55 191
Msa0565860 AT2G42850.2 32.782 363 232 7 22 380 34 388 1.64e-54 187
Msa0565860 AT3G13730.2 28.095 420 288 8 35 447 52 464 9.58e-54 187
Msa0565860 AT1G73340.1 27.696 473 309 9 15 473 24 477 1.21e-53 187
Msa0565860 AT1G19630.3 26.802 444 318 7 7 448 8 446 5.48e-53 185
Msa0565860 AT1G05160.2 28.859 447 309 8 34 474 45 488 9.93e-53 185
Msa0565860 AT1G05160.1 28.859 447 309 8 34 474 45 488 9.93e-53 185
Msa0565860 AT5G14400.3 29.257 417 260 9 39 448 1 389 4.06e-52 181
Msa0565860 AT3G30180.1 26.490 453 306 11 8 449 3 439 7.65e-50 177
Msa0565860 AT3G50660.2 30.446 404 245 9 31 406 36 431 9.03e-49 174
Msa0565860 AT5G38970.1 25.420 476 334 11 6 475 4 464 3.95e-47 169
Msa0565860 AT5G05690.2 28.684 380 260 7 32 409 29 399 8.14e-45 162
Msa0565860 AT3G44970.1 29.039 458 290 13 34 474 35 474 8.60e-44 161
Msa0565860 AT1G19630.2 26.108 406 294 6 7 410 8 409 1.03e-43 160
Msa0565860 AT5G14400.1 27.877 391 247 9 95 478 2 364 8.47e-43 155
Msa0565860 AT1G78490.1 29.318 440 275 15 34 455 35 456 1.22e-42 157
Msa0565860 AT1G55940.2 26.512 430 298 12 34 451 45 468 1.41e-40 152
Msa0565860 AT5G05690.3 27.966 354 236 9 125 471 3 344 1.88e-40 149
Msa0565860 AT4G15300.3 26.291 426 290 11 34 450 25 435 2.91e-40 151
Msa0565860 AT1G55940.1 26.824 425 293 12 34 446 45 463 3.07e-40 151
Msa0565860 AT4G15300.2 27.103 428 284 13 34 450 35 445 3.16e-40 151
Msa0565860 AT1G12740.3 26.331 338 241 6 34 369 31 362 1.40e-38 144
Msa0565860 AT5G38970.2 24.806 387 278 8 93 475 6 383 1.69e-38 144
Msa0565860 AT5G38970.4 24.806 387 278 8 93 475 6 383 1.69e-38 144
Msa0565860 AT4G15393.2 26.932 427 285 14 34 450 35 444 7.36e-38 144
Msa0565860 AT4G15396.1 25.527 427 293 11 34 450 35 446 1.08e-37 144
Msa0565860 AT4G15300.1 26.018 442 293 13 34 450 25 457 3.70e-37 142
Msa0565860 AT5G14400.4 29.290 338 222 8 39 369 1 328 4.98e-37 139
Msa0565860 AT4G15396.3 25.416 421 290 10 34 444 35 441 3.20e-36 139
Msa0565860 AT4G36380.2 27.679 336 237 5 34 366 69 401 3.25e-36 139
Msa0565860 AT1G65670.1 25.161 465 312 13 1 452 2 443 4.76e-36 139
Msa0565860 AT5G48000.2 25.926 459 307 12 34 476 35 476 6.72e-36 139
Msa0565860 AT5G48000.4 25.926 459 307 12 34 476 35 476 6.72e-36 139
Msa0565860 AT5G48000.7 25.926 459 307 12 34 476 35 476 6.72e-36 139
Msa0565860 AT5G48000.6 25.926 459 307 12 34 476 35 476 6.72e-36 139
Msa0565860 AT5G48000.5 25.926 459 307 12 34 476 35 476 6.72e-36 139
Msa0565860 AT5G48000.3 25.926 459 307 12 34 476 35 476 6.72e-36 139
Msa0565860 AT5G48000.1 26.144 459 306 12 34 476 76 517 1.92e-35 138
Msa0565860 AT5G38970.3 24.444 405 287 9 6 405 4 394 1.40e-34 134
Msa0565860 AT4G15310.1 25.877 456 314 13 6 450 6 448 3.90e-32 128
Msa0565860 AT1G78490.2 29.049 389 242 14 34 406 35 405 2.75e-31 125
Msa0565860 AT4G15396.2 24.764 424 279 12 34 450 35 425 1.06e-30 124
Msa0565860 AT3G30290.1 24.485 388 268 11 73 450 3 375 1.05e-28 117
Msa0565860 AT4G15393.1 26.053 380 258 12 34 406 35 398 2.98e-25 107
Msa0565860 AT4G15396.4 24.474 380 266 9 34 406 35 400 9.26e-25 106
Msa0565860 AT2G29090.4 24.567 289 205 6 28 314 43 320 1.13e-24 105
Msa0565860 AT2G34490.1 25.600 375 255 12 119 474 121 490 4.28e-22 99.4
Msa0565860 AT4G37320.1 33.654 208 131 4 247 451 257 460 5.41e-22 99.4
Msa0565860 AT3G28740.1 32.407 216 137 4 258 472 278 485 1.23e-21 98.2
Msa0565860 AT1G11680.1 22.766 470 338 10 7 463 14 471 1.37e-21 97.8
Msa0565860 AT1G31800.1 30.526 190 122 3 268 451 357 542 1.56e-21 98.2
Msa0565860 AT2G46960.1 29.496 278 170 10 215 475 132 400 1.37e-20 94.0
Msa0565860 AT2G46960.2 29.496 278 170 10 215 475 248 516 3.44e-20 94.0
Msa0565860 AT4G15393.3 23.545 378 237 10 34 406 35 365 9.03e-20 91.3
Msa0565860 AT5G52400.1 28.626 262 166 10 224 475 268 518 9.56e-20 92.4
Msa0565860 AT4G37330.1 31.280 211 138 4 247 454 254 460 2.74e-19 90.9
Msa0565860 AT1G66540.2 29.907 214 140 6 247 455 84 292 7.02e-19 88.2
Msa0565860 AT4G37400.1 28.750 240 155 5 219 451 231 461 1.01e-18 89.4
Msa0565860 AT1G66540.1 30.374 214 139 5 247 455 143 351 1.06e-18 88.2
Msa0565860 AT3G56630.1 29.167 240 148 8 250 474 264 496 1.12e-18 89.0
Msa0565860 AT3G44970.2 27.160 324 204 11 34 342 35 341 1.15e-18 88.2
Msa0565860 AT3G53130.1 26.190 252 159 7 221 455 275 516 1.40e-18 89.0
Msa0565860 AT3G14630.1 28.926 242 160 6 216 450 245 481 2.08e-18 88.2
Msa0565860 AT2G28850.1 23.629 474 317 14 28 474 31 486 2.32e-18 88.2
Msa0565860 AT4G37410.1 27.848 237 159 5 219 451 233 461 2.54e-18 88.2
Msa0565860 AT2G34500.1 22.432 370 269 9 119 474 120 485 2.85e-18 87.8
Msa0565860 AT3G14630.2 28.926 242 160 6 216 450 300 536 2.89e-18 88.2
Msa0565860 AT4G37370.1 30.097 206 137 4 247 449 256 457 3.90e-18 87.4
Msa0565860 AT2G28860.1 22.574 474 322 16 28 474 31 486 4.68e-18 87.0
Msa0565860 AT2G26710.1 24.742 388 251 13 112 471 136 510 6.14e-18 87.0
Msa0565860 AT5G24910.1 27.622 286 168 12 212 473 259 529 7.08e-18 86.7
Msa0565860 AT4G37360.1 30.151 199 134 3 258 455 270 464 7.50e-18 86.7
Msa0565860 AT3G14640.1 24.110 365 238 11 114 450 134 487 1.02e-17 86.3
Msa0565860 AT3G14640.2 24.110 365 238 11 114 450 156 509 1.06e-17 86.3
Msa0565860 AT5G24900.2 29.126 206 128 6 278 473 210 407 1.35e-17 85.1
Msa0565860 AT3G14660.1 25.479 365 231 9 114 450 134 485 1.71e-17 85.5
Msa0565860 AT5G24900.1 29.126 206 128 6 278 473 327 524 4.19e-17 84.3
Msa0565860 AT3G14660.2 28.405 257 166 7 204 450 91 339 4.21e-17 83.2
Msa0565860 AT4G37430.1 27.686 242 161 7 219 455 236 468 5.42e-17 84.0
Msa0565860 AT5G57220.1 29.469 207 140 4 247 451 253 455 8.01e-17 83.2
Msa0565860 AT1G34540.1 27.830 212 136 7 247 446 260 466 8.27e-17 83.2
Msa0565860 AT2G46950.1 27.536 276 174 9 217 475 303 569 8.89e-17 83.6
Msa0565860 AT5G25120.1 31.527 203 121 7 285 475 294 490 9.74e-17 83.2
Msa0565860 AT4G13770.1 23.992 471 323 15 8 450 4 467 9.75e-17 83.2
Msa0565860 AT3G14690.1 23.990 421 275 16 63 450 77 485 9.96e-17 83.2
Msa0565860 AT3G14690.2 23.990 421 275 16 63 450 112 520 1.15e-16 83.2
Msa0565860 AT4G37310.1 29.167 216 136 6 247 449 259 470 1.16e-16 82.8
Msa0565860 AT2G45510.1 26.360 239 163 4 238 463 255 493 1.18e-16 82.8
Msa0565860 AT5G25130.1 31.527 203 121 7 285 475 294 490 1.42e-16 82.4
Msa0565860 AT1G64930.1 30.928 194 123 5 266 451 290 480 1.48e-16 82.4
Msa0565860 AT4G13290.1 28.125 288 179 10 187 460 195 468 2.72e-16 81.6
Msa0565860 AT1G64940.1 30.172 232 145 8 232 451 254 480 3.01e-16 81.6
Msa0565860 AT1G75130.1 26.394 269 181 8 210 468 234 495 3.03e-16 81.6
Msa0565860 AT2G44890.1 25.105 239 166 4 238 463 255 493 4.45e-16 81.3
Msa0565860 AT4G13310.1 29.464 224 141 7 248 460 258 475 4.80e-16 80.9
Msa0565860 AT3G14610.1 23.056 360 247 12 114 450 133 485 5.38e-16 80.9
Msa0565860 AT3G14680.1 28.016 257 169 8 203 450 236 485 6.85e-16 80.5
Msa0565860 AT5G58860.1 24.131 518 316 22 11 475 14 507 9.21e-16 80.1
Msa0565860 AT5G25140.1 31.959 194 120 5 282 469 291 478 1.02e-15 80.1
Msa0565860 AT4G37340.1 29.187 209 141 5 249 455 261 464 1.38e-15 79.7
Msa0565860 AT1G50520.1 27.004 237 150 6 226 448 253 480 2.57e-15 79.0
Msa0565860 AT5G67310.1 27.888 251 169 7 201 449 229 469 3.21e-15 78.6
Msa0565860 AT3G14620.1 27.206 272 172 11 217 471 248 510 3.85e-15 78.2
Msa0565860 AT5G06905.1 26.122 245 155 7 236 458 247 487 5.14e-15 77.8
Msa0565860 AT5G36220.2 27.692 195 136 3 258 451 130 320 2.54e-14 74.7
Msa0565860 AT5G36220.1 26.923 208 145 4 247 451 263 466 3.71e-14 75.1
Msa0565860 AT3G26230.1 31.217 189 117 6 278 460 294 475 4.09e-14 75.1
Msa0565860 AT4G15110.1 25.806 217 124 5 267 450 338 550 5.27e-14 74.7
Msa0565860 AT3G20935.1 27.477 222 143 5 238 450 93 305 6.53e-14 73.6
Msa0565860 AT3G20140.1 29.825 171 112 3 285 450 308 475 6.86e-14 74.3
Msa0565860 AT3G61040.1 28.151 238 152 6 233 454 237 471 7.28e-14 74.3
Msa0565860 AT3G32047.1 28.333 240 150 6 232 455 252 485 9.10e-14 73.9
Msa0565860 AT5G25180.1 28.270 237 147 7 256 475 260 490 1.36e-13 73.2
Msa0565860 AT3G26300.1 30.233 172 110 4 285 450 298 465 1.49e-13 73.2
Msa0565860 AT1G11600.1 21.895 475 295 18 32 454 33 483 1.61e-13 73.2
Msa0565860 AT2G45550.1 27.500 200 137 3 256 450 279 475 1.84e-13 72.8
Msa0565860 AT3G14650.1 22.865 363 243 11 114 450 134 485 2.24e-13 72.8
Msa0565860 AT2G26170.2 28.309 272 166 11 218 472 175 434 2.77e-13 72.0
Msa0565860 AT2G26170.1 28.309 272 166 11 218 472 258 517 2.80e-13 72.4
Msa0565860 AT2G23220.1 25.962 208 147 4 247 451 272 475 3.27e-13 72.0
Msa0565860 AT2G12190.1 29.437 231 146 7 233 451 256 481 3.64e-13 72.0
Msa0565860 AT3G20120.2 28.000 175 114 3 285 450 171 342 5.01e-13 70.9
Msa0565860 AT3G20120.3 28.000 175 114 3 285 450 171 342 5.01e-13 70.9
Msa0565860 AT3G20120.1 28.000 175 114 3 285 450 171 342 5.01e-13 70.9
Msa0565860 AT3G20120.4 28.000 175 114 3 285 450 307 478 5.59e-13 71.6
Msa0565860 AT5G38450.1 26.570 207 134 7 278 475 318 515 5.78e-13 71.2
Msa0565860 AT4G27710.1 26.846 298 185 12 197 475 233 516 6.21e-13 71.2
Msa0565860 AT1G67110.1 25.180 278 181 8 215 475 242 509 7.78e-13 70.9
Msa0565860 AT4G12330.1 25.352 213 148 6 242 448 272 479 8.84e-13 70.9
Msa0565860 AT3G26310.1 30.168 179 114 5 279 450 290 464 9.21e-13 70.9
Msa0565860 AT2G23190.1 26.068 234 162 6 220 451 280 504 1.08e-12 70.5
Msa0565860 AT1G33730.1 27.751 209 142 4 247 450 135 339 1.20e-12 69.7
Msa0565860 AT1G33730.2 27.751 209 142 4 247 450 135 339 1.20e-12 69.7
Msa0565860 AT3G48280.1 29.958 237 147 8 230 455 231 459 1.89e-12 69.7
Msa0565860 AT1G64950.1 29.258 229 147 7 233 451 256 479 2.32e-12 69.3
Msa0565860 AT5G23190.1 24.696 247 167 6 221 451 271 514 2.38e-12 69.7
Msa0565860 AT1G13150.1 21.097 474 309 16 30 451 31 491 2.77e-12 69.3
Msa0565860 AT1G50560.1 25.833 240 158 7 256 478 281 517 4.00e-12 68.9
Msa0565860 AT5G04330.1 25.912 274 172 10 198 454 215 474 4.06e-12 68.6
Msa0565860 AT4G36220.1 25.000 212 140 4 248 454 288 485 5.96e-12 68.2
Msa0565860 AT3G26180.2 26.818 220 142 6 247 454 125 337 8.70e-12 67.0
Msa0565860 AT2G45580.2 27.523 218 136 7 249 453 120 328 1.46e-11 66.2
Msa0565860 AT3G26180.1 26.818 220 142 6 247 454 259 471 1.48e-11 67.0
Msa0565860 AT4G15350.1 27.429 175 115 4 285 450 302 473 2.48e-11 66.2
Msa0565860 AT2G45580.1 27.523 218 136 7 249 453 274 482 3.07e-11 65.9
Msa0565860 AT1G13140.1 26.437 174 116 4 285 446 320 493 3.40e-11 65.9
Msa0565860 AT3G26290.2 27.536 207 136 5 282 478 308 510 3.55e-11 65.9
Msa0565860 AT1G74540.1 27.528 178 121 4 285 457 289 463 3.60e-11 65.9
Msa0565860 AT3G26290.1 27.536 207 136 5 282 478 295 497 3.88e-11 65.5
Msa0565860 AT1G13140.2 26.437 174 116 4 285 446 294 467 4.12e-11 65.5
Msa0565860 AT3G20950.1 28.000 175 114 3 285 450 312 483 4.21e-11 65.5
Msa0565860 AT2G27010.1 26.286 175 117 3 285 450 284 455 4.99e-11 65.1
Msa0565860 AT2G45570.1 25.600 250 170 6 211 450 233 476 6.50e-11 65.1
Msa0565860 AT1G69500.1 23.588 301 169 9 224 474 232 521 7.37e-11 64.7
Msa0565860 AT3G26210.1 24.887 221 156 6 257 471 271 487 8.98e-11 64.3
Msa0565860 AT3G48520.1 23.704 270 173 10 223 474 243 497 9.14e-11 64.3

Find 113 sgRNAs with CRISPR-Local

Find 182 sgRNAs with CRISPR-GE


CRISPR-Local

CRISPR-Local
sgRNA_sequence on_target_score Position Region
TAGAAATTACTTGCCTAATA+TGG 0.207689 4_1:+66726181 Msa0565860:CDS
TGATTGTAGTTGAAAGTTTA+AGG 0.215714 4_1:+66725629 Msa0565860:five_prime_UTR
CTTTCCAATGTGTGTTTATA+TGG 0.264138 4_1:-66726220 None:intergenic
AAGTAATTTCTAAGTGTTTC+TGG 0.266492 4_1:-66726170 None:intergenic
TTATTATTCATCATAGCTTA+TGG 0.273742 4_1:+66725731 Msa0565860:exon
AGCATAGGTAAAATCCTTTA+TGG 0.275374 4_1:-66727887 None:intergenic
GAAAGGTTTGTTACATGAAT+AGG 0.281392 4_1:-66727157 None:intergenic
GTGGGACTATTCTGCAGTTT+TGG 0.281789 4_1:-66728626 None:intergenic
GAAGAAAAGGAAAGTGGATT+TGG 0.289451 4_1:+66727300 Msa0565860:CDS
AATGAATAAATAACCAAATA+TGG 0.307769 4_1:+66728599 Msa0565860:three_prime_UTR
CCTATGCTAGAACCTGAAAA+TGG 0.309453 4_1:+66728350 Msa0565860:CDS
AAGGTTGTCTCTTGTTAATA+AGG 0.311020 4_1:+66726097 Msa0565860:CDS
CCAAATGGAACATATGAATA+AGG 0.317996 4_1:-66728203 None:intergenic
TAACAAGTAAATGTGATAAA+AGG 0.325476 4_1:-66727351 None:intergenic
GCCTTATGAAACCTTGTTCC+AGG 0.328634 4_1:-66727232 None:intergenic
ACCTTAGGATTTCCATTTGT+TGG 0.331369 4_1:+66725861 Msa0565860:CDS
CCTTATTCATATGTTCCATT+TGG 0.347733 4_1:+66728203 Msa0565860:CDS
TCTTGCCCCAAACACATTCT+AGG 0.349577 4_1:-66728233 None:intergenic
AGGAGGACCTAGAATGTGTT+TGG 0.349634 4_1:+66728226 Msa0565860:CDS
TGAAAGCTACAAATGAAATA+AGG 0.357447 4_1:+66727257 Msa0565860:CDS
GGCTTCGCAATCAACTTTCC+TGG 0.366680 4_1:+66727214 Msa0565860:CDS
AATGTGTATAGCTGTATTAT+AGG 0.370831 4_1:-66727097 None:intergenic
ATCTTGAGGGAAAGCAAATA+AGG 0.372882 4_1:+66725910 Msa0565860:CDS
TCATTGGTTATGAAGTATCT+TGG 0.378005 4_1:+66727472 Msa0565860:CDS
AAAGGTTTGTTACATGAATA+GGG 0.384152 4_1:-66727156 None:intergenic
CGCTTTCAGAGATGCCATAA+AGG 0.396578 4_1:+66727873 Msa0565860:CDS
GAATTTCTAAAAGGGATCAT+TGG 0.400489 4_1:+66727193 Msa0565860:CDS
TGAGCAATTCTATCCATATT+AGG 0.400802 4_1:-66726194 None:intergenic
GGAGGACCTAGAATGTGTTT+GGG 0.409965 4_1:+66728227 Msa0565860:CDS
TCAAAGGTTTCTCCAACAAA+TGG 0.410321 4_1:-66725873 None:intergenic
AAAACAAGAATGTTCAAGTA+TGG 0.410480 4_1:+66726048 Msa0565860:CDS
TCCTGGAACAAGGTTTCATA+AGG 0.411433 4_1:+66727231 Msa0565860:CDS
CGTATTATTATCGTGTGTAA+TGG 0.421695 4_1:-66728397 None:intergenic
TCCAGAAAATGAAATACTCT+TGG 0.427830 4_1:+66727806 Msa0565860:CDS
AATCTTCCTAGAGGAACCTT+AGG 0.428007 4_1:+66725846 Msa0565860:CDS
TGGGAAGGTTGAAGTCTGAT+TGG 0.431331 4_1:-66728377 None:intergenic
GTATTATTATCGTGTGTAAT+GGG 0.442260 4_1:-66728396 None:intergenic
TATTCATATGTTCCATTTGG+AGG 0.446643 4_1:+66728206 Msa0565860:CDS
ACTCCCCTGCCTCTTTCCCT+TGG 0.450901 4_1:-66727765 None:intergenic
TTCTAGATCAGTACTATCAT+TGG 0.451944 4_1:+66727456 Msa0565860:CDS
TTAAAATGATTATGAAGAAA+AGG 0.452233 4_1:+66727287 Msa0565860:CDS
TTTGATGCTTCAAGGTTTGA+AGG 0.459869 4_1:+66728167 Msa0565860:CDS
TCTCTGAAAGCGCCACCGAC+AGG 0.468430 4_1:-66727862 None:intergenic
GCATCTGCTTCCACAAGTGT+TGG 0.473974 4_1:+66728474 Msa0565860:three_prime_UTR
ATGAAGCAAAAGCAACTAGA+AGG 0.475495 4_1:+66726126 Msa0565860:CDS
TCAGGATTTGAAAACAGTGT+TGG 0.475875 4_1:-66728140 None:intergenic
CTGAGGCTGTCCCCGCCTGT+CGG 0.476524 4_1:+66727847 Msa0565860:CDS
TGAAATTAGCCAAGGGAAAG+AGG 0.480337 4_1:+66727756 Msa0565860:CDS
CAATCAACTTTCCTGGAACA+AGG 0.481445 4_1:+66727221 Msa0565860:CDS
TGAAAGCGCCACCGACAGGC+GGG 0.482966 4_1:-66727858 None:intergenic
TTGTCTCTTGTTAATAAGGT+TGG 0.485068 4_1:+66726101 Msa0565860:CDS
TCATACTTGAACTTCTCATC+AGG 0.487310 4_1:-66728326 None:intergenic
TTTCTAAAAGCAAATCTTGA+GGG 0.493213 4_1:+66725897 Msa0565860:CDS
ACTCCTTCACATATGTGGTT+AGG 0.495089 4_1:-66725607 None:intergenic
GCTCAGTGAAGAAGTTGTTA+AGG 0.495990 4_1:+66726078 Msa0565860:CDS
ATTCTAGGTCCTCCTCCAAA+TGG 0.498202 4_1:-66728218 None:intergenic
ATTAGCCAAGGGAAAGAGGC+AGG 0.499684 4_1:+66727760 Msa0565860:CDS
GGTGTTTATGACAGTTGCAT+TGG 0.503191 4_1:+66728093 Msa0565860:intron
ATTCTTCAAAATATGATGAA+AGG 0.503401 4_1:-66727174 None:intergenic
GGCAGGGGAGTTATTGCAAT+GGG 0.509314 4_1:+66727777 Msa0565860:CDS
AGGCTGTCCCCGCCTGTCGG+TGG 0.509526 4_1:+66727850 Msa0565860:CDS
TCCAACAAATGGAAATCCTA+AGG 0.513579 4_1:-66725862 None:intergenic
AGTGGATTTGGATGAAAAGA+AGG 0.515529 4_1:+66727312 Msa0565860:CDS
GATTATGAAGAAAAGGAAAG+TGG 0.517025 4_1:+66727294 Msa0565860:CDS
GCTTCAAGGTTTGAAGGAGA+AGG 0.523358 4_1:+66728173 Msa0565860:CDS
TAGCCAAGGGAAAGAGGCAG+GGG 0.528348 4_1:+66727762 Msa0565860:CDS
GGAACATATGAATAAGGTGT+TGG 0.529659 4_1:-66728197 None:intergenic
GGAAATCCTAAGGTTCCTCT+AGG 0.533949 4_1:-66725852 None:intergenic
TCATATGTTCCATTTGGAGG+AGG 0.534499 4_1:+66728209 Msa0565860:CDS
TTCTTGTGATGAAATGCAAA+AGG 0.535832 4_1:-66725803 None:intergenic
GTTTATGAACAAGTGTTGAA+AGG 0.536878 4_1:+66727508 Msa0565860:CDS
CAATCACTCCTTCACATATG+TGG 0.541508 4_1:-66725612 None:intergenic
AACACTTGTTCATAAACTTG+AGG 0.550446 4_1:-66727502 None:intergenic
TGTGTGAAATATATATAGTT+CGG 0.550683 4_1:+66725524 Msa0565860:five_prime_UTR
TATTATCGTGTGTAATGGGA+AGG 0.553423 4_1:-66728392 None:intergenic
AATAAGAACTTGTTCCCAGC+TGG 0.553588 4_1:-66726017 None:intergenic
CTGAAAGCGCCACCGACAGG+CGG 0.557611 4_1:-66727859 None:intergenic
CTTCAAGGTTTGAAGGAGAA+GGG 0.558408 4_1:+66728174 Msa0565860:CDS
GAAAGCGCCACCGACAGGCG+GGG 0.559653 4_1:-66727857 None:intergenic
CTTGTTACACCTGATACAAG+TGG 0.559763 4_1:+66727367 Msa0565860:CDS
ACAAAGAGAGCCAAAACTGC+TGG 0.565037 4_1:-66725777 None:intergenic
ATTATAACATCCCTAGTGGA+TGG 0.567013 4_1:+66727911 Msa0565860:CDS
AACAACTTCTTCACTGAGCT+AGG 0.567202 4_1:-66726074 None:intergenic
GAACAACTTGAAATTAGCCA+AGG 0.578712 4_1:+66727748 Msa0565860:intron
GTTTGGGGCAAGAGTTCGCT+CGG 0.580677 4_1:+66728243 Msa0565860:CDS
TATTGTGAAACGTTTCAAGT+GGG 0.582770 4_1:+66728292 Msa0565860:CDS
ATGTTGCTTCTGAAGTTCTG+AGG 0.584534 4_1:+66727830 Msa0565860:CDS
TAACATCCCTAGTGGATGGA+AGG 0.587209 4_1:+66727915 Msa0565860:CDS
ATTTCTAAAAGCAAATCTTG+AGG 0.591691 4_1:+66725896 Msa0565860:CDS
TATCTTGAAACCAACACTTG+TGG 0.599132 4_1:-66728484 None:intergenic
AAACATACCTTCCATCCACT+AGG 0.600198 4_1:-66727922 None:intergenic
AGCACCATATAAACACACAT+TGG 0.601255 4_1:+66726216 Msa0565860:CDS
ACAAGAATGTTCAAGTATGG+TGG 0.606348 4_1:+66726051 Msa0565860:CDS
AGGGATGTTATAATCAGCAT+AGG 0.611512 4_1:-66727902 None:intergenic
CATATAAACACACATTGGAA+AGG 0.612746 4_1:+66726221 Msa0565860:CDS
GTACTGATCTAGAAGTGTCA+TGG 0.614010 4_1:-66727447 None:intergenic
ACTGAACACATATAATTGCA+AGG 0.616038 4_1:-66725665 None:intergenic
AACATACCTTCCATCCACTA+GGG 0.616641 4_1:-66727921 None:intergenic
ATATTGTGAAACGTTTCAAG+TGG 0.621656 4_1:+66728291 Msa0565860:CDS
TTACACCTGATACAAGTGGA+AGG 0.625910 4_1:+66727371 Msa0565860:CDS
TTATTCATCATAGCTTATGG+AGG 0.631091 4_1:+66725734 Msa0565860:exon
TTGTGATGAAATGCAAAAGG+AGG 0.634495 4_1:-66725800 None:intergenic
GAACACACATACAACACACA+TGG 0.635289 4_1:+66728115 Msa0565860:CDS
TCTTTAGTGAAGCTTTGTCA+CGG 0.638057 4_1:+66728511 Msa0565860:three_prime_UTR
TTAGCCAAGGGAAAGAGGCA+GGG 0.642507 4_1:+66727761 Msa0565860:CDS
AACAACTTGAAATTAGCCAA+GGG 0.643857 4_1:+66727749 Msa0565860:CDS
AGGCAGGGGAGTTATTGCAA+TGG 0.650161 4_1:+66727776 Msa0565860:CDS
GTACCTAACCACATATGTGA+AGG 0.653382 4_1:+66725604 Msa0565860:five_prime_UTR
GCTGATTATAACATCCCTAG+TGG 0.655417 4_1:+66727907 Msa0565860:CDS
TGTGATAAAAGGTCTTGTGT+AGG 0.663837 4_1:-66727340 None:intergenic
AGGGGAGTTATTGCAATGGG+AGG 0.678989 4_1:+66727780 Msa0565860:CDS
GAGGACCTAGAATGTGTTTG+GGG 0.695156 4_1:+66728228 Msa0565860:CDS
GAACACATATAATTGCAAGG+AGG 0.765052 4_1:-66725662 None:intergenic

CRISPR-GE

badsite warning sgRNA_sequence Strand Position Region GC_content
!!! ATAGTTTTTTGTTTTTTTTT+TGG - chr4_1:66726903-66726922 None:intergenic 10.0%
!! GTTGATTAAATTTATGAAAA+TGG + chr4_1:66726332-66726351 Msa0565860:intron 15.0%
!!! TAAAGTTTGACTTTATTTTA+GGG - chr4_1:66726744-66726763 None:intergenic 15.0%
!!! ATAAAGTTTGACTTTATTTT+AGG - chr4_1:66726745-66726764 None:intergenic 15.0%
!!! TATTTTGAAGAATTTCTAAA+AGG + chr4_1:66727184-66727203 Msa0565860:CDS 15.0%
!!! ATTTTGAAGAATTTCTAAAA+GGG + chr4_1:66727185-66727204 Msa0565860:CDS 15.0%
!! TTAAAATGATTATGAAGAAA+AGG + chr4_1:66727287-66727306 Msa0565860:CDS 15.0%
!! TTTGAACATTAATTTCAATA+TGG + chr4_1:66727545-66727564 Msa0565860:intron 15.0%
!! AATGAATAAATAACCAAATA+TGG + chr4_1:66728599-66728618 Msa0565860:three_prime_UTR 15.0%
!! TGTGTGAAATATATATAGTT+CGG + chr4_1:66725524-66725543 Msa0565860:five_prime_UTR 20.0%
!!! ATAGTTCGGATTTTTTTTTT+TGG + chr4_1:66725538-66725557 Msa0565860:five_prime_UTR 20.0%
!!! TAGTTCGGATTTTTTTTTTT+GGG + chr4_1:66725539-66725558 Msa0565860:five_prime_UTR 20.0%
!! TTATTATTCATCATAGCTTA+TGG + chr4_1:66725731-66725750 Msa0565860:exon 20.0%
!!! ATTTGCTTTTAGAAATTCAA+AGG - chr4_1:66725892-66725911 None:intergenic 20.0%
!! TTAAATTTATGAAAATGGTC+CGG + chr4_1:66726337-66726356 Msa0565860:intron 20.0%
!!! GCTAATTAACACTTTAAAAA+TGG - chr4_1:66726652-66726671 None:intergenic 20.0%
!! ATTCTTCAAAATATGATGAA+AGG - chr4_1:66727177-66727196 None:intergenic 20.0%
!! TAACAAGTAAATGTGATAAA+AGG - chr4_1:66727354-66727373 None:intergenic 20.0%
!! TATAAGAAAAAAAAGCAACA+TGG - chr4_1:66727670-66727689 None:intergenic 20.0%
! TGATTGTAGTTGAAAGTTTA+AGG + chr4_1:66725629-66725648 Msa0565860:five_prime_UTR 25.0%
!!! AATAACTAGAGCTTTGTTTT+TGG - chr4_1:66725709-66725728 None:intergenic 25.0%
!! ATTTCTAAAAGCAAATCTTG+AGG + chr4_1:66725896-66725915 Msa0565860:CDS 25.0%
!! TTTCTAAAAGCAAATCTTGA+GGG + chr4_1:66725897-66725916 Msa0565860:CDS 25.0%
! AAAACAAGAATGTTCAAGTA+TGG + chr4_1:66726048-66726067 Msa0565860:CDS 25.0%
! AAGTAATTTCTAAGTGTTTC+TGG - chr4_1:66726173-66726192 None:intergenic 25.0%
! TAGAAATTACTTGCCTAATA+TGG + chr4_1:66726181-66726200 Msa0565860:CDS 25.0%
! AACAAACTATCATCAAAGAA+AGG - chr4_1:66726294-66726313 None:intergenic 25.0%
! AAAATAAGAACCAGTTGAAT+CGG - chr4_1:66726539-66726558 None:intergenic 25.0%
! AAAAACATGCTAGAATCATA+TGG - chr4_1:66726581-66726600 None:intergenic 25.0%
! TCATGACTTAAATGTCTAAA+CGG + chr4_1:66726613-66726632 Msa0565860:intron 25.0%
! AACATCTTCACAAATATCTA+TGG - chr4_1:66726793-66726812 None:intergenic 25.0%
! ACATCATGATGTAAATTGAT+TGG + chr4_1:66726836-66726855 Msa0565860:intron 25.0%
!!! TGTTTTTTTTTTGGTAAGAC+TGG - chr4_1:66726894-66726913 None:intergenic 25.0%
!!! TTGTTGATTTACACTTTTGA+AGG + chr4_1:66727052-66727071 Msa0565860:intron 25.0%
!!! TGTTGATTTACACTTTTGAA+GGG + chr4_1:66727053-66727072 Msa0565860:intron 25.0%
! AATGTGTATAGCTGTATTAT+AGG - chr4_1:66727100-66727119 None:intergenic 25.0%
!!! TTGTTGCTTATTTTTAAGCA+TGG + chr4_1:66727129-66727148 Msa0565860:CDS 25.0%
!!! AAAGGTTTGTTACATGAATA+GGG - chr4_1:66727159-66727178 None:intergenic 25.0%
! TGAAAGCTACAAATGAAATA+AGG + chr4_1:66727257-66727276 Msa0565860:CDS 25.0%
!! ATACTATTACTTCTTTTTGC+TGG + chr4_1:66727424-66727443 Msa0565860:CDS 25.0%
!!! TATTCTAAAGCATGTATGTA+TGG + chr4_1:66728072-66728091 Msa0565860:intron 25.0%
! GTATTATTATCGTGTGTAAT+GGG - chr4_1:66728399-66728418 None:intergenic 25.0%
TTAGGTACAAATATGTGTTC+AGG - chr4_1:66725592-66725611 None:intergenic 30.0%
!!! AATTGCAAGGAGGATTTTTT+AGG - chr4_1:66725655-66725674 None:intergenic 30.0%
ACTGAACACATATAATTGCA+AGG - chr4_1:66725668-66725687 None:intergenic 30.0%
!!! TAGAGCTTTGTTTTTGGAAT+TGG - chr4_1:66725703-66725722 None:intergenic 30.0%
TTATTCATCATAGCTTATGG+AGG + chr4_1:66725734-66725753 Msa0565860:exon 30.0%
TTCTTGTGATGAAATGCAAA+AGG - chr4_1:66725806-66725825 None:intergenic 30.0%
AAAAAGCTTAATCTTCCTAG+AGG + chr4_1:66725837-66725856 Msa0565860:CDS 30.0%
!! GTTTTCAAGACTTCAATGTT+TGG + chr4_1:66725969-66725988 Msa0565860:CDS 30.0%
AAGGTTGTCTCTTGTTAATA+AGG + chr4_1:66726097-66726116 Msa0565860:CDS 30.0%
TTGTCTCTTGTTAATAAGGT+TGG + chr4_1:66726101-66726120 Msa0565860:CDS 30.0%
TGAGCAATTCTATCCATATT+AGG - chr4_1:66726197-66726216 None:intergenic 30.0%
CTTTCCAATGTGTGTTTATA+TGG - chr4_1:66726223-66726242 None:intergenic 30.0%
CATATAAACACACATTGGAA+AGG + chr4_1:66726221-66726240 Msa0565860:CDS 30.0%
TAATTAGCAGATAGTGAGAT+AGG + chr4_1:66726664-66726683 Msa0565860:intron 30.0%
!! GAAAAACAATAGTTTCTAGC+TGG - chr4_1:66726714-66726733 None:intergenic 30.0%
!! GAAAGGTTTGTTACATGAAT+AGG - chr4_1:66727160-66727179 None:intergenic 30.0%
! GAATTTCTAAAAGGGATCAT+TGG + chr4_1:66727193-66727212 Msa0565860:CDS 30.0%
GATTATGAAGAAAAGGAAAG+TGG + chr4_1:66727294-66727313 Msa0565860:CDS 30.0%
TTCTAGATCAGTACTATCAT+TGG + chr4_1:66727456-66727475 Msa0565860:CDS 30.0%
! TCATTGGTTATGAAGTATCT+TGG + chr4_1:66727472-66727491 Msa0565860:CDS 30.0%
AACACTTGTTCATAAACTTG+AGG - chr4_1:66727505-66727524 None:intergenic 30.0%
!! GTTTATGAACAAGTGTTGAA+AGG + chr4_1:66727508-66727527 Msa0565860:CDS 30.0%
CTTCTATGAAGAACTTGATT+AGG + chr4_1:66727690-66727709 Msa0565860:intron 30.0%
AACAACTTGAAATTAGCCAA+GGG + chr4_1:66727749-66727768 Msa0565860:CDS 30.0%
TCCAGAAAATGAAATACTCT+TGG + chr4_1:66727806-66727825 Msa0565860:CDS 30.0%
!!! TCCAAGAGTATTTCATTTTC+TGG - chr4_1:66727810-66727829 None:intergenic 30.0%
AGCATAGGTAAAATCCTTTA+TGG - chr4_1:66727890-66727909 None:intergenic 30.0%
!! CTTGAAGCATCAAATTTTTC+AGG - chr4_1:66728161-66728180 None:intergenic 30.0%
CTGAAAAATTTGATGCTTCA+AGG + chr4_1:66728159-66728178 Msa0565860:CDS 30.0%
CCAAATGGAACATATGAATA+AGG - chr4_1:66728206-66728225 None:intergenic 30.0%
CCTTATTCATATGTTCCATT+TGG + chr4_1:66728203-66728222 Msa0565860:CDS 30.0%
TATTCATATGTTCCATTTGG+AGG + chr4_1:66728206-66728225 Msa0565860:CDS 30.0%
ATATTGTGAAACGTTTCAAG+TGG + chr4_1:66728291-66728310 Msa0565860:CDS 30.0%
! TATTGTGAAACGTTTCAAGT+GGG + chr4_1:66728292-66728311 Msa0565860:CDS 30.0%
CGTATTATTATCGTGTGTAA+TGG - chr4_1:66728400-66728419 None:intergenic 30.0%
GAACACATATAATTGCAAGG+AGG - chr4_1:66725665-66725684 None:intergenic 35.0%
!! CATAGTTTTACCAGCAGTTT+TGG + chr4_1:66725767-66725786 Msa0565860:CDS 35.0%
TTGTGATGAAATGCAAAAGG+AGG - chr4_1:66725803-66725822 None:intergenic 35.0%
ACCTTAGGATTTCCATTTGT+TGG + chr4_1:66725861-66725880 Msa0565860:CDS 35.0%
TCCAACAAATGGAAATCCTA+AGG - chr4_1:66725865-66725884 None:intergenic 35.0%
TCAAAGGTTTCTCCAACAAA+TGG - chr4_1:66725876-66725895 None:intergenic 35.0%
ATCTTGAGGGAAAGCAAATA+AGG + chr4_1:66725910-66725929 Msa0565860:CDS 35.0%
ACAAGAATGTTCAAGTATGG+TGG + chr4_1:66726051-66726070 Msa0565860:CDS 35.0%
ATGAAGCAAAAGCAACTAGA+AGG + chr4_1:66726126-66726145 Msa0565860:CDS 35.0%
AGCACCATATAAACACACAT+TGG + chr4_1:66726216-66726235 Msa0565860:CDS 35.0%
ATCAATCAGTTCCTATGTGT+AGG + chr4_1:66726258-66726277 Msa0565860:intron 35.0%
! AAATTTTCCTCAACAGCAAC+CGG - chr4_1:66726359-66726378 None:intergenic 35.0%
CTCTCTCTAACATGATTGAA+AGG - chr4_1:66726389-66726408 None:intergenic 35.0%
!! TAGCTGATATCGAGTTGAAT+TGG - chr4_1:66726471-66726490 None:intergenic 35.0%
AGATAGGTACATGGCATAAA+AGG + chr4_1:66726680-66726699 Msa0565860:intron 35.0%
GTAAATTGATTGGATGTACG+TGG + chr4_1:66726846-66726865 Msa0565860:intron 35.0%
!! GATTTACACTTTTGAAGGGA+AGG + chr4_1:66727057-66727076 Msa0565860:intron 35.0%
! GAAGAAAAGGAAAGTGGATT+TGG + chr4_1:66727300-66727319 Msa0565860:CDS 35.0%
! AGTGGATTTGGATGAAAAGA+AGG + chr4_1:66727312-66727331 Msa0565860:CDS 35.0%
! TGTGATAAAAGGTCTTGTGT+AGG - chr4_1:66727343-66727362 None:intergenic 35.0%
AAAAACCTTCCACTTGTATC+AGG - chr4_1:66727379-66727398 None:intergenic 35.0%
! TGGAAGGTTTTTGAATGAAG+TGG + chr4_1:66727387-66727406 Msa0565860:CDS 35.0%
GAACAACTTGAAATTAGCCA+AGG + chr4_1:66727748-66727767 Msa0565860:intron 35.0%
AGGGATGTTATAATCAGCAT+AGG - chr4_1:66727905-66727924 None:intergenic 35.0%
ATTATAACATCCCTAGTGGA+TGG + chr4_1:66727911-66727930 Msa0565860:CDS 35.0%
TCAGGATTTGAAAACAGTGT+TGG - chr4_1:66728143-66728162 None:intergenic 35.0%
TTTGATGCTTCAAGGTTTGA+AGG + chr4_1:66728167-66728186 Msa0565860:CDS 35.0%
GGAACATATGAATAAGGTGT+TGG - chr4_1:66728200-66728219 None:intergenic 35.0%
TCATACTTGAACTTCTCATC+AGG - chr4_1:66728329-66728348 None:intergenic 35.0%
! TATTATCGTGTGTAATGGGA+AGG - chr4_1:66728395-66728414 None:intergenic 35.0%
TATCTTGAAACCAACACTTG+TGG - chr4_1:66728487-66728506 None:intergenic 35.0%
! TCTTTAGTGAAGCTTTGTCA+CGG + chr4_1:66728511-66728530 Msa0565860:three_prime_UTR 35.0%
!!! CAGTTTTGGAACACCATATT+TGG - chr4_1:66728615-66728634 None:intergenic 35.0%
GTACCTAACCACATATGTGA+AGG + chr4_1:66725604-66725623 Msa0565860:five_prime_UTR 40.0%
ACTCCTTCACATATGTGGTT+AGG - chr4_1:66725610-66725629 None:intergenic 40.0%
CAATCACTCCTTCACATATG+TGG - chr4_1:66725615-66725634 None:intergenic 40.0%
AATCTTCCTAGAGGAACCTT+AGG + chr4_1:66725846-66725865 Msa0565860:CDS 40.0%
! GAGAACATAGCTGTGTTTTG+TGG + chr4_1:66725993-66726012 Msa0565860:CDS 40.0%
! AATAAGAACTTGTTCCCAGC+TGG - chr4_1:66726020-66726039 None:intergenic 40.0%
AACAACTTCTTCACTGAGCT+AGG - chr4_1:66726077-66726096 None:intergenic 40.0%
GCTCAGTGAAGAAGTTGTTA+AGG + chr4_1:66726078-66726097 Msa0565860:CDS 40.0%
GAACAACTTGTCCTACACAT+AGG - chr4_1:66726272-66726291 None:intergenic 40.0%
!! TGATATCGAGTTGAATTGGC+TGG - chr4_1:66726467-66726486 None:intergenic 40.0%
ATATCAGCTAGTTCGCTTGT+TGG + chr4_1:66726481-66726500 Msa0565860:intron 40.0%
!! TTCGCTTGTTGGTTTGATTC+TGG + chr4_1:66726492-66726511 Msa0565860:intron 40.0%
! GATTCTGGCTATACTTTAGC+CGG + chr4_1:66726507-66726526 Msa0565860:intron 40.0%
! ATTCTGGCTATACTTTAGCC+GGG + chr4_1:66726508-66726527 Msa0565860:intron 40.0%
CAGATAGTGAGATAGGTACA+TGG + chr4_1:66726671-66726690 Msa0565860:intron 40.0%
CAATCAACTTTCCTGGAACA+AGG + chr4_1:66727221-66727240 Msa0565860:CDS 40.0%
TCCTGGAACAAGGTTTCATA+AGG + chr4_1:66727231-66727250 Msa0565860:CDS 40.0%
CTTGTTACACCTGATACAAG+TGG + chr4_1:66727367-66727386 Msa0565860:CDS 40.0%
TTACACCTGATACAAGTGGA+AGG + chr4_1:66727371-66727390 Msa0565860:CDS 40.0%
!! GTACTGATCTAGAAGTGTCA+TGG - chr4_1:66727450-66727469 None:intergenic 40.0%
TGAAATTAGCCAAGGGAAAG+AGG + chr4_1:66727756-66727775 Msa0565860:CDS 40.0%
!! ATGTTGCTTCTGAAGTTCTG+AGG + chr4_1:66727830-66727849 Msa0565860:CDS 40.0%
GCTGATTATAACATCCCTAG+TGG + chr4_1:66727907-66727926 Msa0565860:CDS 40.0%
AACATACCTTCCATCCACTA+GGG - chr4_1:66727924-66727943 None:intergenic 40.0%
AAACATACCTTCCATCCACT+AGG - chr4_1:66727925-66727944 None:intergenic 40.0%
GGTGTTTATGACAGTTGCAT+TGG + chr4_1:66728093-66728112 Msa0565860:intron 40.0%
GAACACACATACAACACACA+TGG + chr4_1:66728115-66728134 Msa0565860:CDS 40.0%
CTTCAAGGTTTGAAGGAGAA+GGG + chr4_1:66728174-66728193 Msa0565860:CDS 40.0%
TCATATGTTCCATTTGGAGG+AGG + chr4_1:66728209-66728228 Msa0565860:CDS 40.0%
!!! CCATTTTCAGGTTCTAGCAT+AGG - chr4_1:66728353-66728372 None:intergenic 40.0%
CCTATGCTAGAACCTGAAAA+TGG + chr4_1:66728350-66728369 Msa0565860:CDS 40.0%
! CTGATTGGAAGTCCATTTTC+AGG - chr4_1:66728365-66728384 None:intergenic 40.0%
ACAAAGAGAGCCAAAACTGC+TGG - chr4_1:66725780-66725799 None:intergenic 45.0%
GGAAATCCTAAGGTTCCTCT+AGG - chr4_1:66725855-66725874 None:intergenic 45.0%
GCCTTATGAAACCTTGTTCC+AGG - chr4_1:66727235-66727254 None:intergenic 45.0%
!! AAAACAGTGCAGCTGACTTG+AGG - chr4_1:66727576-66727595 None:intergenic 45.0%
TACTTGAGGTCGGAACACAA+GGG + chr4_1:66727613-66727632 Msa0565860:intron 45.0%
CGCTTTCAGAGATGCCATAA+AGG + chr4_1:66727873-66727892 Msa0565860:CDS 45.0%
! TAACATCCCTAGTGGATGGA+AGG + chr4_1:66727915-66727934 Msa0565860:CDS 45.0%
GCTTCAAGGTTTGAAGGAGA+AGG + chr4_1:66728173-66728192 Msa0565860:CDS 45.0%
ATTCTAGGTCCTCCTCCAAA+TGG - chr4_1:66728221-66728240 None:intergenic 45.0%
AGGAGGACCTAGAATGTGTT+TGG + chr4_1:66728226-66728245 Msa0565860:CDS 45.0%
GGAGGACCTAGAATGTGTTT+GGG + chr4_1:66728227-66728246 Msa0565860:CDS 45.0%
GAGGACCTAGAATGTGTTTG+GGG + chr4_1:66728228-66728247 Msa0565860:CDS 45.0%
TCTTGCCCCAAACACATTCT+AGG - chr4_1:66728236-66728255 None:intergenic 45.0%
TGGGAAGGTTGAAGTCTGAT+TGG - chr4_1:66728380-66728399 None:intergenic 45.0%
! CTGTGTTTTGTGGACCAGCT+GGG + chr4_1:66726003-66726022 Msa0565860:CDS 50.0%
! AAATGGTCCGGTTGCTGTTG+AGG + chr4_1:66726349-66726368 Msa0565860:intron 50.0%
! CCAGTTGAATCGGTTCAACC+CGG - chr4_1:66726529-66726548 None:intergenic 50.0%
!! CACTTTTGAAGGGAAGGAGC+AGG + chr4_1:66727063-66727082 Msa0565860:intron 50.0%
GGCTTCGCAATCAACTTTCC+TGG + chr4_1:66727214-66727233 Msa0565860:CDS 50.0%
CACTGCAACGTACTTGAGGT+CGG + chr4_1:66727603-66727622 Msa0565860:intron 50.0%
GTACTTGAGGTCGGAACACA+AGG + chr4_1:66727612-66727631 Msa0565860:intron 50.0%
ATTAGCCAAGGGAAAGAGGC+AGG + chr4_1:66727760-66727779 Msa0565860:CDS 50.0%
TTAGCCAAGGGAAAGAGGCA+GGG + chr4_1:66727761-66727780 Msa0565860:CDS 50.0%
AGGCAGGGGAGTTATTGCAA+TGG + chr4_1:66727776-66727795 Msa0565860:CDS 50.0%
GGCAGGGGAGTTATTGCAAT+GGG + chr4_1:66727777-66727796 Msa0565860:CDS 50.0%
AGGGGAGTTATTGCAATGGG+AGG + chr4_1:66727780-66727799 Msa0565860:CDS 50.0%
GCATCTGCTTCCACAAGTGT+TGG + chr4_1:66728474-66728493 Msa0565860:three_prime_UTR 50.0%
! GCTGTGTTTTGTGGACCAGC+TGG + chr4_1:66726002-66726021 Msa0565860:CDS 55.0%
! CCGGGTTGAACCGATTCAAC+TGG + chr4_1:66726526-66726545 Msa0565860:intron 55.0%
!! CAGTGCAGCTGACTTGAGGT+CGG - chr4_1:66727572-66727591 None:intergenic 55.0%
CGTGCACTGCAACGTACTTG+AGG + chr4_1:66727599-66727618 Msa0565860:intron 55.0%
TAGCCAAGGGAAAGAGGCAG+GGG + chr4_1:66727762-66727781 Msa0565860:CDS 55.0%
! GTTTGGGGCAAGAGTTCGCT+CGG + chr4_1:66728243-66728262 Msa0565860:CDS 55.0%
ACTCCCCTGCCTCTTTCCCT+TGG - chr4_1:66727768-66727787 None:intergenic 60.0%
!! TCTCTGAAAGCGCCACCGAC+AGG - chr4_1:66727865-66727884 None:intergenic 60.0%
!! TGAAAGCGCCACCGACAGGC+GGG - chr4_1:66727861-66727880 None:intergenic 65.0%
!! CTGAAAGCGCCACCGACAGG+CGG - chr4_1:66727862-66727881 None:intergenic 65.0%
CTGAGGCTGTCCCCGCCTGT+CGG + chr4_1:66727847-66727866 Msa0565860:CDS 70.0%
!! GAAAGCGCCACCGACAGGCG+GGG - chr4_1:66727860-66727879 None:intergenic 70.0%
AGGCTGTCCCCGCCTGTCGG+TGG + chr4_1:66727850-66727869 Msa0565860:CDS 75.0%
Chromosome Type Strat End Strand Name
chr4_1 gene 66725522 66728635 66725522 ID=Msa0565860;Name=Msa0565860
chr4_1 mRNA 66725522 66728635 66725522 ID=Msa0565860-mRNA-1;Parent=Msa0565860;Name=Msa0565860-mRNA-1;_AED=0.14;_eAED=0.14;_QI=208|1|1|1|0.75|0.6|5|223|480
chr4_1 exon 66725522 66725579 66725522 ID=Msa0565860-mRNA-1:exon:21732;Parent=Msa0565860-mRNA-1
chr4_1 exon 66725600 66726242 66725600 ID=Msa0565860-mRNA-1:exon:21733;Parent=Msa0565860-mRNA-1
chr4_1 exon 66727074 66727529 66727074 ID=Msa0565860-mRNA-1:exon:21734;Parent=Msa0565860-mRNA-1
chr4_1 exon 66727749 66727936 66727749 ID=Msa0565860-mRNA-1:exon:21735;Parent=Msa0565860-mRNA-1
chr4_1 exon 66728107 66728635 66728107 ID=Msa0565860-mRNA-1:exon:21736;Parent=Msa0565860-mRNA-1
chr4_1 five_prime_UTR 66725522 66725579 66725522 ID=Msa0565860-mRNA-1:five_prime_utr;Parent=Msa0565860-mRNA-1
chr4_1 five_prime_UTR 66725600 66725749 66725600 ID=Msa0565860-mRNA-1:five_prime_utr;Parent=Msa0565860-mRNA-1
chr4_1 CDS 66725750 66726242 66725750 ID=Msa0565860-mRNA-1:cds;Parent=Msa0565860-mRNA-1
chr4_1 CDS 66727074 66727529 66727074 ID=Msa0565860-mRNA-1:cds;Parent=Msa0565860-mRNA-1
chr4_1 CDS 66727749 66727936 66727749 ID=Msa0565860-mRNA-1:cds;Parent=Msa0565860-mRNA-1
chr4_1 CDS 66728107 66728412 66728107 ID=Msa0565860-mRNA-1:cds;Parent=Msa0565860-mRNA-1
chr4_1 three_prime_UTR 66728413 66728635 66728413 ID=Msa0565860-mRNA-1:three_prime_utr;Parent=Msa0565860-mRNA-1
Gene Sequence

>Msa0565860

ATGGAGGTGACAAAGCTCATAGTTTTACCAGCAGTTTTGGCTCTCTTTGTCCTCCTTTTGCATTTCATCACAAGAATTATCAAACTCAAAAAGCTTAATCTTCCTAGAGGAACCTTAGGATTTCCATTTGTTGGAGAAACCTTTGAATTTCTAAAAGCAAATCTTGAGGGAAAGCAAATAAGGTTCATACAAGAGAGAATGAAGAAATATGACTCAAAAGTTTTCAAGACTTCAATGTTTGGAGAGAACATAGCTGTGTTTTGTGGACCAGCTGGGAACAAGTTCTTATTTAGCAATGAAAACAAGAATGTTCAAGTATGGTGGCCTAGCTCAGTGAAGAAGTTGTTAAGGTTGTCTCTTGTTAATAAGGTTGGTGATGAAGCAAAAGCAACTAGAAGGTTGCTTATGAGTTTTCTTAATCCAGAAACACTTAGAAATTACTTGCCTAATATGGATAGAATTGCTCAGCACCATATAAACACACATTGGAAAGGGAAGGAGCAGGTTGTTGTCTATCCTATAATACAGCTATACACATTTGAATTAGCTTGTTGCTTATTTTTAAGCATGGAAGACCCTATTCATGTAACAAACCTTTCATCATATTTTGAAGAATTTCTAAAAGGGATCATTGGCTTCGCAATCAACTTTCCTGGAACAAGGTTTCATAAGGCAATGAAAGCTACAAATGAAATAAGGAAAGAAATTAAAATGATTATGAAGAAAAGGAAAGTGGATTTGGATGAAAAGAAGGCATCACCTACACAAGACCTTTTATCACATTTACTTGTTACACCTGATACAAGTGGAAGGTTTTTGAATGAAGTGGAGATTATTGATAACATACTATTACTTCTTTTTGCTGGCCATGACACTTCTAGATCAGTACTATCATTGGTTATGAAGTATCTTGGAAATTTGCCTCAAGTTTATGAACAAGTGTTGAAAGAACAACTTGAAATTAGCCAAGGGAAAGAGGCAGGGGAGTTATTGCAATGGGAGGATATCCAGAAAATGAAATACTCTTGGAATGTTGCTTCTGAAGTTCTGAGGCTGTCCCCGCCTGTCGGTGGCGCTTTCAGAGATGCCATAAAGGATTTTACCTATGCTGATTATAACATCCCTAGTGGATGGAAGTTGCATTGGAACACACATACAACACACATGGATCCAACACTGTTTTCAAATCCTGAAAAATTTGATGCTTCAAGGTTTGAAGGAGAAGGGCCAACACCTTATTCATATGTTCCATTTGGAGGAGGACCTAGAATGTGTTTGGGGCAAGAGTTCGCTCGGTTAGAGATACTTGTTTTTATGCATAATATTGTGAAACGTTTCAAGTGGGATTTAGTTATTCCTGATGAGAAGTTCAAGTATGATCCTATGCTAGAACCTGAAAATGGACTTCCAATCAGACTTCAACCTTCCCATTACACACGATAA
Protein sequence

>Msa0565860

MEVTKLIVLPAVLALFVLLLHFITRIIKLKKLNLPRGTLGFPFVGETFEFLKANLEGKQIRFIQERMKKYDSKVFKTSMFGENIAVFCGPAGNKFLFSNENKNVQVWWPSSVKKLLRLSLVNKVGDEAKATRRLLMSFLNPETLRNYLPNMDRIAQHHINTHWKGKEQVVVYPIIQLYTFELACCLFLSMEDPIHVTNLSSYFEEFLKGIIGFAINFPGTRFHKAMKATNEIRKEIKMIMKKRKVDLDEKKASPTQDLLSHLLVTPDTSGRFLNEVEIIDNILLLLFAGHDTSRSVLSLVMKYLGNLPQVYEQVLKEQLEISQGKEAGELLQWEDIQKMKYSWNVASEVLRLSPPVGGAFRDAIKDFTYADYNIPSGWKLHWNTHTTHMDPTLFSNPEKFDASRFEGEGPTPYSYVPFGGGPRMCLGQEFARLEILVFMHNIVKRFKWDLVIPDEKFKYDPMLEPENGLPIRLQPSHYTR*