Alfalfa Gene Editing Database
Alfalfa Gene Editing Database
| Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa1069340 | XP_003624398.1 | 95.833 | 120 | 5 | 0 | 40 | 159 | 7 | 126 | 3.56e-59 | 190 |
| Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|
| Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa1069340 | G7KV85 | 95.833 | 120 | 5 | 0 | 40 | 159 | 7 | 126 | 1.70e-59 | 190 |
| Gene ID | Type | Classification |
|---|
| Gene ID | Type | Classification |
|---|
Co-expression Network
| Gene1 | Gene2 | correlation coefficient | p_value | FDR |
|---|---|---|---|---|
| Msa0026780 | Msa1069340 | 0.803982 | 2.688116e-49 | -8.615850e-47 |
| Msa0052780 | Msa1069340 | 0.856664 | 2.761924e-62 | -8.615850e-47 |
| Msa0061220 | Msa1069340 | 0.841385 | 4.907380e-58 | -8.615850e-47 |
| Msa0077370 | Msa1069340 | 0.824043 | 9.993530e-54 | -8.615850e-47 |
| Msa0091730 | Msa1069340 | 0.808942 | 2.417012e-50 | -8.615850e-47 |
| Msa0097570 | Msa1069340 | 0.865306 | 6.498029e-65 | -8.615850e-47 |
| Msa0611060 | Msa1069340 | 0.847427 | 1.164258e-59 | -8.615850e-47 |
| Msa0618550 | Msa1069340 | 0.802980 | 4.337246e-49 | -8.615850e-47 |
| Msa0626920 | Msa1069340 | 0.840531 | 8.219423e-58 | -8.615850e-47 |
| Msa0632420 | Msa1069340 | 0.826593 | 2.491434e-54 | -8.615850e-47 |
| Msa0713060 | Msa1069340 | 0.806087 | 9.753176e-50 | -8.615850e-47 |
| Msa0744640 | Msa1069340 | 0.864316 | 1.327814e-64 | -8.615850e-47 |
| Msa0779450 | Msa1069340 | -0.802443 | 5.596791e-49 | -8.615850e-47 |
| Msa0816630 | Msa1069340 | 0.815408 | 9.389111e-52 | -8.615850e-47 |
| Msa0841730 | Msa1069340 | 0.865377 | 6.170889e-65 | -8.615850e-47 |
| Msa0122530 | Msa1069340 | 0.803708 | 3.064767e-49 | -8.615850e-47 |
| Msa0145430 | Msa1069340 | 0.825566 | 4.371417e-54 | -8.615850e-47 |
| Msa0148960 | Msa1069340 | 0.821155 | 4.692090e-53 | -8.615850e-47 |
| Msa0204140 | Msa1069340 | 0.834016 | 3.824261e-56 | -8.615850e-47 |
| Msa0399820 | Msa1069340 | 0.822453 | 2.349622e-53 | -8.615850e-47 |
| Msa0417790 | Msa1069340 | -0.800730 | 1.256533e-48 | -8.615850e-47 |
| Msa1016960 | Msa1069340 | 0.814419 | 1.555704e-51 | -8.615850e-47 |
| Msa1032480 | Msa1069340 | 0.835453 | 1.663317e-56 | -8.615850e-47 |
| Msa1058200 | Msa1069340 | 0.809545 | 1.794580e-50 | -8.615850e-47 |
| Msa1069340 | Msa1114670 | 0.803465 | 3.441015e-49 | -8.615850e-47 |
| Msa1069340 | Msa1131430 | 0.827051 | 1.936269e-54 | -8.615850e-47 |
| Msa1069340 | Msa1159170 | 0.841327 | 5.082047e-58 | -8.615850e-47 |
| Msa1069340 | Msa1173150 | 0.858975 | 5.695394e-63 | -8.615850e-47 |
| Msa1069340 | Msa1202470 | 0.808905 | 2.461039e-50 | -8.615850e-47 |
| Msa1069340 | Msa1202800 | 0.815462 | 9.133604e-52 | -8.615850e-47 |
| Msa1069340 | Msa1218160 | 0.801007 | 1.103215e-48 | -8.615850e-47 |
| Msa1069340 | Msa1221220 | 0.840262 | 9.667516e-58 | -8.615850e-47 |
| Msa1069340 | Msa1252000 | 0.822435 | 2.372335e-53 | -8.615850e-47 |
| Msa1069340 | Msa1252810 | 0.808811 | 2.578286e-50 | -8.615850e-47 |
| Msa1069340 | Msa1255210 | 0.806170 | 9.366824e-50 | -8.615850e-47 |
| Msa1069340 | Msa1262540 | 0.809925 | 1.486863e-50 | -8.615850e-47 |
| Msa1069340 | Msa1295650 | 0.800152 | 1.648175e-48 | -8.615850e-47 |
| Msa1069340 | Msa1405530 | 0.801643 | 8.172055e-49 | -8.615850e-47 |
| Msa0285890 | Msa1069340 | 0.802669 | 5.026302e-49 | -8.615850e-47 |
| Msa0320230 | Msa1069340 | 0.807464 | 4.991482e-50 | -8.615850e-47 |
| Msa0345890 | Msa1069340 | 0.803833 | 2.886014e-49 | -8.615850e-47 |
| Msa0490320 | Msa1069340 | 0.805614 | 1.226135e-49 | -8.615850e-47 |
| Msa0529000 | Msa1069340 | 0.814607 | 1.413560e-51 | -8.615850e-47 |
| Msa0529110 | Msa1069340 | 0.810877 | 9.262991e-51 | -8.615850e-47 |
| Msa0578460 | Msa1069340 | 0.811124 | 8.190994e-51 | -8.615850e-47 |
| Msa0590620 | Msa1069340 | -0.812727 | 3.665319e-51 | -8.615850e-47 |
| Msa0863940 | Msa1069340 | 0.814757 | 1.309395e-51 | -8.615850e-47 |
| Msa0870510 | Msa1069340 | 0.823912 | 1.072972e-53 | -8.615850e-47 |
| Msa0873910 | Msa1069340 | 0.808046 | 3.753272e-50 | -8.615850e-47 |
| Msa0901270 | Msa1069340 | 0.801050 | 1.080991e-48 | -8.615850e-47 |
| Msa0905570 | Msa1069340 | 0.822852 | 1.898166e-53 | -8.615850e-47 |
PPI
| Gene1 | Gene2 | Type |
|---|
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa1069340 | MtrunA17_Chr7g0251311 | 95.833 | 120 | 5 | 0 | 40 | 159 | 7 | 126 | 3.28e-63 | 190 |
| Msa1069340 | MtrunA17_Chr7g0251301 | 49.624 | 133 | 48 | 5 | 40 | 159 | 3 | 129 | 8.18e-34 | 115 |
| Msa1069340 | MtrunA17_Chr7g0251301 | 81.818 | 44 | 5 | 1 | 1 | 41 | 66 | 109 | 1.12e-17 | 74.3 |
| Msa1069340 | MtrunA17_Chr7g0251291 | 44.505 | 182 | 59 | 7 | 1 | 159 | 58 | 220 | 3.16e-33 | 117 |
| Msa1069340 | MtrunA17_Chr7g0251291 | 52.756 | 127 | 45 | 4 | 48 | 159 | 4 | 130 | 1.46e-32 | 115 |
| Msa1069340 | MtrunA17_Chr7g0251281 | 52.756 | 127 | 45 | 4 | 48 | 159 | 4 | 130 | 4.40e-33 | 114 |
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|
Find 37 sgRNAs with CRISPR-Local
Find 322 sgRNAs with CRISPR-GE
CRISPR-Local
| sgRNA_sequence | on_target_score | Position | Region |
|---|---|---|---|
| AGCTTTGTCCACATCTTTAT+TGG | 0.171024 | 7_2:-64907767 | None:intergenic |
| ACAGATTCCTCAAGTTTCTA+AGG | 0.278446 | 7_2:+64902991 | Msa1069340:CDS |
| CGTAAGTACCTCGTTGGTTT+AGG | 0.289074 | 7_2:-64907614 | None:intergenic |
| ACTTATATTTGAGATTTCTA+AGG | 0.310038 | 7_2:+64907904 | Msa1069340:CDS |
| TTGAACACTGATAACATCTT+TGG | 0.319963 | 7_2:+64902962 | Msa1069340:CDS |
| AGAAGGATTAAACTATTTCA+TGG | 0.325765 | 7_2:-64907954 | None:intergenic |
| CAAGGTTAACATGGGCTATT+AGG | 0.336227 | 7_2:+64907741 | Msa1069340:CDS |
| ATGAAAAGTGATACCATCTT+TGG | 0.337936 | 7_2:+64907824 | Msa1069340:CDS |
| TAAGGATCGTGTAGTTTCTA+AGG | 0.360505 | 7_2:+64907850 | Msa1069340:CDS |
| ATTTGAGATTTCTAAGGCCT+TGG | 0.387808 | 7_2:+64907910 | Msa1069340:CDS |
| GAAGGAAGACGAAGGTTCTA+AGG | 0.412638 | 7_2:+64907684 | Msa1069340:CDS |
| CGCCTTCGTAAGTACCTCGT+TGG | 0.453316 | 7_2:-64907620 | None:intergenic |
| TGATACCATCTTTGGAACTA+AGG | 0.464934 | 7_2:+64907832 | Msa1069340:CDS |
| CTCGATGAGGACGCCGTCAC+TGG | 0.472795 | 7_2:+64907656 | Msa1069340:CDS |
| AGGTTCTAAGGTTGAGAAGA+AGG | 0.485381 | 7_2:+64907696 | Msa1069340:CDS |
| GAGTAGTTCCAAGGTTAACA+TGG | 0.518857 | 7_2:+64907732 | Msa1069340:CDS |
| GAGGACGCCGTCACTGGTGA+TGG | 0.520102 | 7_2:+64907662 | Msa1069340:CDS |
| CTAATAGCCCATGTTAACCT+TGG | 0.534159 | 7_2:-64907740 | None:intergenic |
| GGATTATGCCTGTGATGCGT+TGG | 0.554226 | 7_2:+64903012 | Msa1069340:CDS |
| CTTAACCTCCAACGCATCAC+AGG | 0.556283 | 7_2:-64903020 | None:intergenic |
| TAAGGTTGAGAAGAAGGCAG+TGG | 0.557373 | 7_2:+64907702 | Msa1069340:CDS |
| ACGATCCTTAGTTCCAAAGA+TGG | 0.563624 | 7_2:-64907837 | None:intergenic |
| TTATGCCTGTGATGCGTTGG+AGG | 0.584688 | 7_2:+64903015 | Msa1069340:CDS |
| GGTTGAGAAGAAGGCAGTGG+AGG | 0.585451 | 7_2:+64907705 | Msa1069340:CDS |
| ACACTGATAACATCTTTGGT+AGG | 0.587957 | 7_2:+64902966 | Msa1069340:CDS |
| GGAGGATAAGAGTAGTTCCA+AGG | 0.595694 | 7_2:+64907723 | Msa1069340:CDS |
| CTTCCTTCCATCACCAGTGA+CGG | 0.597928 | 7_2:-64907669 | None:intergenic |
| ACGCCGTCACTGGTGATGGA+AGG | 0.598118 | 7_2:+64907666 | Msa1069340:CDS |
| GCATAATCCTTAGAAACTTG+AGG | 0.609108 | 7_2:-64902998 | None:intergenic |
| AGTAGTTCCAAGGTTAACAT+GGG | 0.641526 | 7_2:+64907733 | Msa1069340:CDS |
| TAATTCATGAGAAGCAACCA+AGG | 0.645785 | 7_2:-64907927 | None:intergenic |
| GCGATATCAGCGACTCGATG+AGG | 0.651419 | 7_2:+64907643 | Msa1069340:CDS |
| TTAGGTCACCAATAAAGATG+TGG | 0.652661 | 7_2:+64907759 | Msa1069340:CDS |
| AACCAACGAGGTACTTACGA+AGG | 0.694403 | 7_2:+64907618 | Msa1069340:CDS |
| CAACGAGGTACTTACGAAGG+CGG | 0.697336 | 7_2:+64907621 | Msa1069340:CDS |
| TGGTGATGGAAGGAAGACGA+AGG | 0.725318 | 7_2:+64907676 | Msa1069340:CDS |
| CACTGATACCTAAACCAACG+AGG | 0.733513 | 7_2:+64907606 | Msa1069340:CDS |
CRISPR-GE
| badsite warning | sgRNA_sequence | Strand | Position | Region | GC_content |
|---|---|---|---|---|---|
| !!! | AATTTTAAACGAATAATTAT+AGG | - | chr7_2:64903387-64903406 | None:intergenic | 10.0% |
| !!! | GATAAAATATTTTTTTTTGA+AGG | + | chr7_2:64903924-64903943 | Msa1069340:intron | 10.0% |
| !! | TATTATAGTACAAAATATAT+AGG | - | chr7_2:64905129-64905148 | None:intergenic | 10.0% |
| !! | GAAATTTACTTATAAAAATA+AGG | + | chr7_2:64905330-64905349 | Msa1069340:intron | 10.0% |
| !! | ATACAAATATAAAAAAAAAG+GGG | - | chr7_2:64905965-64905984 | None:intergenic | 10.0% |
| !! | CATACAAATATAAAAAAAAA+GGG | - | chr7_2:64905966-64905985 | None:intergenic | 10.0% |
| !!! | ATTTTATTTATGATATACTA+TGG | - | chr7_2:64906878-64906897 | None:intergenic | 10.0% |
| !! | GGAATATTATTATATAATTA+GGG | - | chr7_2:64907332-64907351 | None:intergenic | 10.0% |
| !!! | TATTGAATGAATCTAAAATA+TGG | - | chr7_2:64903143-64903162 | None:intergenic | 15.0% |
| !!! | AAATATTTTTTTTTGAAGGA+AGG | + | chr7_2:64903928-64903947 | Msa1069340:intron | 15.0% |
| !!! | AAATATAAGTTCTACTTTTT+CGG | - | chr7_2:64904426-64904445 | None:intergenic | 15.0% |
| !!! | CATTTAAACACAAATTTTTT+TGG | - | chr7_2:64904882-64904901 | None:intergenic | 15.0% |
| !!! | ATATTTATTTATTTTTGACG+TGG | - | chr7_2:64905181-64905200 | None:intergenic | 15.0% |
| !! | TCATTAGTTAAAACAATTAA+GGG | - | chr7_2:64905434-64905453 | None:intergenic | 15.0% |
| !! | TACAAATATAAAAAAAAAGG+GGG | - | chr7_2:64905964-64905983 | None:intergenic | 15.0% |
| !! | CCATACAAATATAAAAAAAA+AGG | - | chr7_2:64905967-64905986 | None:intergenic | 15.0% |
| !!! | CCTTTTTTTTTATATTTGTA+TGG | + | chr7_2:64905964-64905983 | Msa1069340:intron | 15.0% |
| !!! | ATTGGATTTTGATTAAATAT+TGG | + | chr7_2:64906031-64906050 | Msa1069340:intron | 15.0% |
| !!! | CTTTTTATCTTTATTTTTAG+GGG | - | chr7_2:64906292-64906311 | None:intergenic | 15.0% |
| !!! | CCTTTTTATCTTTATTTTTA+GGG | - | chr7_2:64906293-64906312 | None:intergenic | 15.0% |
| !!! | AAAAAAGACATTTTATAGTT+TGG | + | chr7_2:64906340-64906359 | Msa1069340:intron | 15.0% |
| !!! | TTTTTAATCACAAATATTAG+CGG | - | chr7_2:64906533-64906552 | None:intergenic | 15.0% |
| !! | AAGTTTGACTAAAATAATAT+GGG | - | chr7_2:64906793-64906812 | None:intergenic | 15.0% |
| !!! | AATTATTTTATTATGTAGCA+TGG | + | chr7_2:64906845-64906864 | Msa1069340:intron | 15.0% |
| !!! | GATTTTTTGTTTTTGTTTTT+GGG | - | chr7_2:64907053-64907072 | None:intergenic | 15.0% |
| !!! | AGATTTTTTGTTTTTGTTTT+TGG | - | chr7_2:64907054-64907073 | None:intergenic | 15.0% |
| !!! | CTAATTAATATTTTTGTAGA+AGG | + | chr7_2:64907260-64907279 | Msa1069340:intron | 15.0% |
| !! | GGGAATATTATTATATAATT+AGG | - | chr7_2:64907333-64907352 | None:intergenic | 15.0% |
| !! | TATATGTTGGAAAATTTAAT+GGG | - | chr7_2:64907444-64907463 | None:intergenic | 15.0% |
| !! | TCTATGATATAATATGTTTA+TGG | - | chr7_2:64907507-64907526 | None:intergenic | 15.0% |
| !! | CATTCAATAAATGATGTATT+TGG | + | chr7_2:64903154-64903173 | Msa1069340:intron | 20.0% |
| !!! | TATTGAATGAATCTAAAACA+TGG | + | chr7_2:64903204-64903223 | Msa1069340:intron | 20.0% |
| !! | TATTTATATCAACTCCTTAA+TGG | + | chr7_2:64903741-64903760 | Msa1069340:intron | 20.0% |
| !!! | GTTTTAAAATAGACCTTAAA+TGG | - | chr7_2:64903822-64903841 | None:intergenic | 20.0% |
| !!! | GTTGTTTTTTTAAGCTATAT+TGG | + | chr7_2:64903993-64904012 | Msa1069340:intron | 20.0% |
| !! | TATGTTTGGATTGTTTATTT+GGG | - | chr7_2:64904126-64904145 | None:intergenic | 20.0% |
| !!! | AGTATCTCAAATAATTTGTA+GGG | - | chr7_2:64904236-64904255 | None:intergenic | 20.0% |
| !!! | AAGTATCTCAAATAATTTGT+AGG | - | chr7_2:64904237-64904256 | None:intergenic | 20.0% |
| !!! | TTTTTCTTCAAGTAATCTAA+TGG | - | chr7_2:64904376-64904395 | None:intergenic | 20.0% |
| !!! | ATGTGAAAAATTGACTTTTA+CGG | + | chr7_2:64904581-64904600 | Msa1069340:intron | 20.0% |
| !! | TATAAATCCAAAATTTGTCA+CGG | - | chr7_2:64904701-64904720 | None:intergenic | 20.0% |
| !!! | TTTTGGATTTATAGAATTTG+TGG | + | chr7_2:64904708-64904727 | Msa1069340:intron | 20.0% |
| !! | TTTGGATTTATAGAATTTGT+GGG | + | chr7_2:64904709-64904728 | Msa1069340:intron | 20.0% |
| !!! | ACTAGCATTTTTACTTTTAT+TGG | - | chr7_2:64904772-64904791 | None:intergenic | 20.0% |
| !! | AATAAAAGTAAAAATGCTAG+TGG | + | chr7_2:64904771-64904790 | Msa1069340:intron | 20.0% |
| !! | AAATTTGTGTTTAAATGTGA+TGG | + | chr7_2:64904885-64904904 | Msa1069340:intron | 20.0% |
| !! | TATTTGTAATACTCTAGTTA+AGG | - | chr7_2:64905300-64905319 | None:intergenic | 20.0% |
| !! | GTCATTAGTTAAAACAATTA+AGG | - | chr7_2:64905435-64905454 | None:intergenic | 20.0% |
| !! | TAACACTTGAACAAAAAAAA+AGG | + | chr7_2:64905498-64905517 | Msa1069340:intron | 20.0% |
| !! | ACAAATATAAAAAAAAAGGG+GGG | - | chr7_2:64905963-64905982 | None:intergenic | 20.0% |
| !!! | TTGTTTTTTGTTGAAATAGA+GGG | + | chr7_2:64906219-64906238 | Msa1069340:intron | 20.0% |
| !! | CCCTAAAAATAAAGATAAAA+AGG | + | chr7_2:64906290-64906309 | Msa1069340:intron | 20.0% |
| !!! | GCCTTTTTATCTTTATTTTT+AGG | - | chr7_2:64906294-64906313 | None:intergenic | 20.0% |
| !! | AAAACTAAAAGTTAATGAGT+TGG | + | chr7_2:64906452-64906471 | Msa1069340:intron | 20.0% |
| !!! | TTGGAGATATTTTTTTTTTG+AGG | + | chr7_2:64906471-64906490 | Msa1069340:intron | 20.0% |
| !!! | TGGAGATATTTTTTTTTTGA+GGG | + | chr7_2:64906472-64906491 | Msa1069340:intron | 20.0% |
| !!! | ATTTTATGTTCAAACTTCAA+AGG | + | chr7_2:64906607-64906626 | Msa1069340:intron | 20.0% |
| !!! | TTTTATGTTCAAACTTCAAA+GGG | + | chr7_2:64906608-64906627 | Msa1069340:intron | 20.0% |
| !!! | TTATTTAATGACGGATTATT+TGG | + | chr7_2:64906645-64906664 | Msa1069340:intron | 20.0% |
| !! | GAAGTTTGACTAAAATAATA+TGG | - | chr7_2:64906794-64906813 | None:intergenic | 20.0% |
| !!! | TCCTAAAACAAAATTTTGTA+TGG | + | chr7_2:64906976-64906995 | Msa1069340:intron | 20.0% |
| !!! | TCCATACAAAATTTTGTTTT+AGG | - | chr7_2:64906980-64906999 | None:intergenic | 20.0% |
| !! | CAACTAGATAACAAATATTT+GGG | + | chr7_2:64907198-64907217 | Msa1069340:intron | 20.0% |
| !! | GTATATGTTGGAAAATTTAA+TGG | - | chr7_2:64907445-64907464 | None:intergenic | 20.0% |
| !! | ATATGTTTATGGAAATGAAT+TGG | - | chr7_2:64907496-64907515 | None:intergenic | 20.0% |
| !!! | ACTTATATTTGAGATTTCTA+AGG | + | chr7_2:64907904-64907923 | Msa1069340:CDS | 20.0% |
| !!! | ATGTTGGCAAATTTTAAGAA+TGG | + | chr7_2:64902914-64902933 | Msa1069340:CDS | 25.0% |
| ! | CTCATATATTGAGATTTCAA+AGG | + | chr7_2:64903043-64903062 | Msa1069340:intron | 25.0% |
| !! | TTTTTGCTTATATTTGTGAC+CGG | - | chr7_2:64903228-64903247 | None:intergenic | 25.0% |
| ! | CATTCAATAAATGATGTATG+TGG | - | chr7_2:64903193-64903212 | None:intergenic | 25.0% |
| !! | TTTTTGCTTATATTTGTGAC+CGG | + | chr7_2:64903228-64903247 | Msa1069340:intron | 25.0% |
| ! | TAGCAAGTGAATAAAAAGAA+AGG | - | chr7_2:64903315-64903334 | None:intergenic | 25.0% |
| ! | TTGCTAAGATTTATGTCATA+GGG | + | chr7_2:64903329-64903348 | Msa1069340:intron | 25.0% |
| !! | AAACCTTTATTTCTCATTCT+TGG | - | chr7_2:64903440-64903459 | None:intergenic | 25.0% |
| ! | TTACAACATTTAATTGTCGA+TGG | + | chr7_2:64903459-64903478 | Msa1069340:intron | 25.0% |
| ! | AATTATCTATTTACCCTCAA+CGG | - | chr7_2:64903500-64903519 | None:intergenic | 25.0% |
| ! | AGGGTAAATAGATAATTTCT+AGG | + | chr7_2:64903503-64903522 | Msa1069340:intron | 25.0% |
| !!! | TAAGTTTTGTTAAGCTGTTT+GGG | - | chr7_2:64904085-64904104 | None:intergenic | 25.0% |
| !!! | ATAAGTTTTGTTAAGCTGTT+TGG | - | chr7_2:64904086-64904105 | None:intergenic | 25.0% |
| ! | GTATGTTTGGATTGTTTATT+TGG | - | chr7_2:64904127-64904146 | None:intergenic | 25.0% |
| !! | TATTGAACTAAAGGTATGTT+TGG | - | chr7_2:64904140-64904159 | None:intergenic | 25.0% |
| ! | ACAATCAGTTATTGAACTAA+AGG | - | chr7_2:64904149-64904168 | None:intergenic | 25.0% |
| !!! | TTTAAAACCGTGACAAATTT+TGG | + | chr7_2:64904691-64904710 | Msa1069340:intron | 25.0% |
| ! | GGATAGAAATATAATTGTTG+AGG | + | chr7_2:64904730-64904749 | Msa1069340:intron | 25.0% |
| ! | TCTAGTAGTGATATGTTAAA+AGG | + | chr7_2:64904942-64904961 | Msa1069340:intron | 25.0% |
| !!! | AACCACTTTATTTTCTTTTC+AGG | - | chr7_2:64904982-64905001 | None:intergenic | 25.0% |
| ! | CTATAATATTGTGTTGAGAT+TGG | + | chr7_2:64905141-64905160 | Msa1069340:intron | 25.0% |
| ! | TTAGTTAAAACAATTAAGGG+AGG | - | chr7_2:64905431-64905450 | None:intergenic | 25.0% |
| !!! | GTTATTTAACGATTTGCTAA+TGG | - | chr7_2:64905482-64905501 | None:intergenic | 25.0% |
| ! | ATACGATAATACAAGTAGAA+GGG | + | chr7_2:64905716-64905735 | Msa1069340:intron | 25.0% |
| !!! | TTATATGTGTTTGGTGTTAT+TGG | + | chr7_2:64905804-64905823 | Msa1069340:intron | 25.0% |
| ! | AATACTAATAGAACTGCAAT+TGG | - | chr7_2:64905931-64905950 | None:intergenic | 25.0% |
| ! | CAAATATAAAAAAAAAGGGG+GGG | - | chr7_2:64905962-64905981 | None:intergenic | 25.0% |
| !! | TTGTTTGGAGTTATTCATAT+TGG | + | chr7_2:64906013-64906032 | Msa1069340:intron | 25.0% |
| ! | ATTAAATATTGGAGTTACCA+TGG | + | chr7_2:64906042-64906061 | Msa1069340:intron | 25.0% |
| !!! | CTTGTTTTTTGTTGAAATAG+AGG | + | chr7_2:64906218-64906237 | Msa1069340:intron | 25.0% |
| !!! | TGTTTTTTGTTGAAATAGAG+GGG | + | chr7_2:64906220-64906239 | Msa1069340:intron | 25.0% |
| !! | TGTCATTTATACAAAACTCA+AGG | + | chr7_2:64906250-64906269 | Msa1069340:intron | 25.0% |
| ! | GTCATTTATACAAAACTCAA+GGG | + | chr7_2:64906251-64906270 | Msa1069340:intron | 25.0% |
| ! | TCTCGTACATTATTTAATGA+CGG | + | chr7_2:64906636-64906655 | Msa1069340:intron | 25.0% |
| ! | GGTATACATTATATTGAGTT+TGG | + | chr7_2:64906666-64906685 | Msa1069340:intron | 25.0% |
| ! | ACATTATATTGAGTTTGGTT+TGG | + | chr7_2:64906671-64906690 | Msa1069340:intron | 25.0% |
| !! | ACAAAATTTTGTATGGATCA+AGG | + | chr7_2:64906983-64907002 | Msa1069340:intron | 25.0% |
| ! | AATTTGTCCATTATTTGCAA+CGG | - | chr7_2:64907078-64907097 | None:intergenic | 25.0% |
| !! | GTATTTAAGTTTACCTATCA+TGG | + | chr7_2:64907103-64907122 | Msa1069340:intron | 25.0% |
| !!! | CCAAATATTTGTTATCTAGT+TGG | - | chr7_2:64907200-64907219 | None:intergenic | 25.0% |
| ! | CCAACTAGATAACAAATATT+TGG | + | chr7_2:64907197-64907216 | Msa1069340:intron | 25.0% |
| ! | AATATACTAACCTTATCTGA+TGG | + | chr7_2:64907231-64907250 | Msa1069340:intron | 25.0% |
| ! | TTAGATTATACCATCAGATA+AGG | - | chr7_2:64907244-64907263 | None:intergenic | 25.0% |
| ! | AAGATTATATAGAATGAGAG+TGG | + | chr7_2:64907301-64907320 | Msa1069340:intron | 25.0% |
| TTGAACACTGATAACATCTT+TGG | + | chr7_2:64902962-64902981 | Msa1069340:CDS | 30.0% | |
| CTTGCTAAGATTTATGTCAT+AGG | + | chr7_2:64903328-64903347 | Msa1069340:intron | 30.0% | |
| ATGTTACACAGAAAATGTTG+AGG | + | chr7_2:64903355-64903374 | Msa1069340:intron | 30.0% | |
| ACTCCAAGAATGAGAAATAA+AGG | + | chr7_2:64903434-64903453 | Msa1069340:intron | 30.0% | |
| ACATTTAATTGTCGATGGAA+CGG | + | chr7_2:64903464-64903483 | Msa1069340:intron | 30.0% | |
| TGATGAGTGTTTGTGTTATA+AGG | - | chr7_2:64903857-64903876 | None:intergenic | 30.0% | |
| !!! | GTGTGCATAAGCTATTTTTT+AGG | + | chr7_2:64903897-64903916 | Msa1069340:intron | 30.0% |
| TGTTTATTTGGGTGTAACTT+TGG | - | chr7_2:64904115-64904134 | None:intergenic | 30.0% | |
| ! | CAAATAATTTGTAGGGAGAT+AGG | - | chr7_2:64904229-64904248 | None:intergenic | 30.0% |
| TTATCTCCATGAACATAACT+TGG | + | chr7_2:64904290-64904309 | Msa1069340:intron | 30.0% | |
| ATGAAATAAATAGCAGCGAA+TGG | + | chr7_2:64904821-64904840 | Msa1069340:intron | 30.0% | |
| TGAAATAAATAGCAGCGAAT+GGG | + | chr7_2:64904822-64904841 | Msa1069340:intron | 30.0% | |
| TATGTTAAAAGGACGATTAG+AGG | + | chr7_2:64904953-64904972 | Msa1069340:intron | 30.0% | |
| TGCCTGAAAAGAAAATAAAG+TGG | + | chr7_2:64904977-64904996 | Msa1069340:intron | 30.0% | |
| ! | TGCCATTTAAAGAGACTTTA+GGG | - | chr7_2:64905374-64905393 | None:intergenic | 30.0% |
| ! | ATGTCCAATTTGAAACTAGA+GGG | - | chr7_2:64905405-64905424 | None:intergenic | 30.0% |
| ATAACATATTCTCTTTCCCT+TGG | - | chr7_2:64905538-64905557 | None:intergenic | 30.0% | |
| AGAAGTCTATATACTAGAAG+TGG | - | chr7_2:64905613-64905632 | None:intergenic | 30.0% | |
| CTTCTAGTATATAGACTTCT+CGG | + | chr7_2:64905613-64905632 | Msa1069340:intron | 30.0% | |
| GATACGATAATACAAGTAGA+AGG | + | chr7_2:64905715-64905734 | Msa1069340:intron | 30.0% | |
| ATTCACATGGCTTGAAAATT+AGG | + | chr7_2:64906091-64906110 | Msa1069340:intron | 30.0% | |
| TTCACATGGCTTGAAAATTA+GGG | + | chr7_2:64906092-64906111 | Msa1069340:intron | 30.0% | |
| ATTTATACAAAACTCAAGGG+AGG | + | chr7_2:64906254-64906273 | Msa1069340:intron | 30.0% | |
| !!! | TTTTTTTTTTGAGGGAGAGT+TGG | + | chr7_2:64906480-64906499 | Msa1069340:intron | 30.0% |
| AAGATTATAGATCTTGCATC+AGG | + | chr7_2:64906737-64906756 | Msa1069340:intron | 30.0% | |
| ! | ATATGGGACGTATACATTTT+TGG | - | chr7_2:64906777-64906796 | None:intergenic | 30.0% |
| AAATCTACCGTTGCAAATAA+TGG | + | chr7_2:64907068-64907087 | Msa1069340:intron | 30.0% | |
| TTTGAACGTGAATTATTGGT+GGG | - | chr7_2:64907385-64907404 | None:intergenic | 30.0% | |
| ACAGTTTGAACGTGAATTAT+TGG | - | chr7_2:64907389-64907408 | None:intergenic | 30.0% | |
| GTACTTGCATATGTATATGT+TGG | - | chr7_2:64907457-64907476 | None:intergenic | 30.0% | |
| !! | AAAGATGGTATCACTTTTCA+TGG | - | chr7_2:64907825-64907844 | None:intergenic | 30.0% |
| ATGAAAAGTGATACCATCTT+TGG | + | chr7_2:64907824-64907843 | Msa1069340:CDS | 30.0% | |
| ACACTGATAACATCTTTGGT+AGG | + | chr7_2:64902966-64902985 | Msa1069340:CDS | 35.0% | |
| ACAGATTCCTCAAGTTTCTA+AGG | + | chr7_2:64902991-64903010 | Msa1069340:CDS | 35.0% | |
| GCATAATCCTTAGAAACTTG+AGG | - | chr7_2:64903001-64903020 | None:intergenic | 35.0% | |
| ATTAAGAAGAGATACACCTC+CGG | - | chr7_2:64903250-64903269 | None:intergenic | 35.0% | |
| CTAAGATTTATGTCATAGGG+TGG | + | chr7_2:64903332-64903351 | Msa1069340:intron | 35.0% | |
| ! | AAACCTCAAGAGCAATGTTT+TGG | + | chr7_2:64903545-64903564 | Msa1069340:intron | 35.0% |
| TAACCAAAACATTGCTCTTG+AGG | - | chr7_2:64903551-64903570 | None:intergenic | 35.0% | |
| !!! | CAAGAGCAATGTTTTGGTTA+CGG | + | chr7_2:64903551-64903570 | Msa1069340:intron | 35.0% |
| !!! | AAGAGCAATGTTTTGGTTAC+GGG | + | chr7_2:64903552-64903571 | Msa1069340:intron | 35.0% |
| AACTCATGCAAGTGTATTCT+CGG | - | chr7_2:64903659-64903678 | None:intergenic | 35.0% | |
| !!! | TTACGCTCAGCTATTTTGAT+GGG | + | chr7_2:64903682-64903701 | Msa1069340:intron | 35.0% |
| TGGGAATGAACAAAAACAGA+TGG | + | chr7_2:64903701-64903720 | Msa1069340:intron | 35.0% | |
| GGGAATGAACAAAAACAGAT+GGG | + | chr7_2:64903702-64903721 | Msa1069340:intron | 35.0% | |
| ! | CTTAATGGCCTTTTCAGTTT+CGG | + | chr7_2:64903756-64903775 | Msa1069340:intron | 35.0% |
| AATGGTTTACGAGGAAAGAT+AGG | - | chr7_2:64903804-64903823 | None:intergenic | 35.0% | |
| CTTTCCTCGTAAACCATTTA+AGG | + | chr7_2:64903806-64903825 | Msa1069340:intron | 35.0% | |
| TAGACCTTAAATGGTTTACG+AGG | - | chr7_2:64903813-64903832 | None:intergenic | 35.0% | |
| !! | GTAATGGGAAACTCAGATTT+TGG | - | chr7_2:64904638-64904657 | None:intergenic | 35.0% |
| AATCTGAGTTTCCCATTACA+CGG | + | chr7_2:64904639-64904658 | Msa1069340:intron | 35.0% | |
| TACTATCTGTGGTAAGACAA+TGG | + | chr7_2:64905013-64905032 | Msa1069340:intron | 35.0% | |
| ACTATCTGTGGTAAGACAAT+GGG | + | chr7_2:64905014-64905033 | Msa1069340:intron | 35.0% | |
| ! | ATTTAAAGAGACTTTAGGGG+AGG | - | chr7_2:64905370-64905389 | None:intergenic | 35.0% |
| TCCCCTAAAGTCTCTTTAAA+TGG | + | chr7_2:64905369-64905388 | Msa1069340:intron | 35.0% | |
| GCCATTTAAAGAGACTTTAG+GGG | - | chr7_2:64905373-64905392 | None:intergenic | 35.0% | |
| !! | GTGCCATTTAAAGAGACTTT+AGG | - | chr7_2:64905375-64905394 | None:intergenic | 35.0% |
| ! | TGTCCAATTTGAAACTAGAG+GGG | - | chr7_2:64905404-64905423 | None:intergenic | 35.0% |
| ! | CATGTCCAATTTGAAACTAG+AGG | - | chr7_2:64905406-64905425 | None:intergenic | 35.0% |
| TTTGCTAATGGAGTTAGTTG+TGG | - | chr7_2:64905470-64905489 | None:intergenic | 35.0% | |
| ! | TTCTCGGTTGATATCTAATG+TGG | + | chr7_2:64905629-64905648 | Msa1069340:intron | 35.0% |
| CAGGAATTTATCTCACAGTA+TGG | + | chr7_2:64905652-64905671 | Msa1069340:intron | 35.0% | |
| ! | GAAGCTATAAGTTGACGAAT+TGG | + | chr7_2:64905674-64905693 | Msa1069340:intron | 35.0% |
| ! | CTATAAGTTGACGAATTGGT+GGG | + | chr7_2:64905678-64905697 | Msa1069340:intron | 35.0% |
| ! | TATAAGTTGACGAATTGGTG+GGG | + | chr7_2:64905679-64905698 | Msa1069340:intron | 35.0% |
| CTGGTGGAATTATATGTGTT+TGG | + | chr7_2:64905795-64905814 | Msa1069340:intron | 35.0% | |
| !! | TGGTTTGTGATAGCTTTTGA+CGG | + | chr7_2:64905824-64905843 | Msa1069340:intron | 35.0% |
| AAAAAAAAGGGGGGGAAATT+TGG | - | chr7_2:64905954-64905973 | None:intergenic | 35.0% | |
| !! | ATCTCTTTTGAGTGATGATG+TGG | + | chr7_2:64905989-64906008 | Msa1069340:intron | 35.0% |
| !! | TCTCTTTTGAGTGATGATGT+GGG | + | chr7_2:64905990-64906009 | Msa1069340:intron | 35.0% |
| AAATATTGGAGTTACCATGG+CGG | + | chr7_2:64906045-64906064 | Msa1069340:intron | 35.0% | |
| ! | TTTTTGTTGAAATAGAGGGG+AGG | + | chr7_2:64906223-64906242 | Msa1069340:intron | 35.0% |
| ! | TTGGTAGAGATAATTTGTGC+AGG | + | chr7_2:64906403-64906422 | Msa1069340:intron | 35.0% |
| ! | TGGTAGAGATAATTTGTGCA+GGG | + | chr7_2:64906404-64906423 | Msa1069340:intron | 35.0% |
| !!! | CATTTTTGGTTGCGAGATTA+AGG | - | chr7_2:64906763-64906782 | None:intergenic | 35.0% |
| TAATAAGTTGCATGTGGGAA+TGG | - | chr7_2:64906926-64906945 | None:intergenic | 35.0% | |
| CCAGTTAATAAGTTGCATGT+GGG | - | chr7_2:64906931-64906950 | None:intergenic | 35.0% | |
| TCCAGTTAATAAGTTGCATG+TGG | - | chr7_2:64906932-64906951 | None:intergenic | 35.0% | |
| GTTTGAACGTGAATTATTGG+TGG | - | chr7_2:64907386-64907405 | None:intergenic | 35.0% | |
| AATTGGTGCGTGTTTGAATA+GGG | - | chr7_2:64907479-64907498 | None:intergenic | 35.0% | |
| AGTAGTTCCAAGGTTAACAT+GGG | + | chr7_2:64907733-64907752 | Msa1069340:CDS | 35.0% | |
| TTAGGTCACCAATAAAGATG+TGG | + | chr7_2:64907759-64907778 | Msa1069340:CDS | 35.0% | |
| ! | AGCTTTGTCCACATCTTTAT+TGG | - | chr7_2:64907770-64907789 | None:intergenic | 35.0% |
| !! | TGATACCATCTTTGGAACTA+AGG | + | chr7_2:64907832-64907851 | Msa1069340:CDS | 35.0% |
| TAAGGATCGTGTAGTTTCTA+AGG | + | chr7_2:64907850-64907869 | Msa1069340:CDS | 35.0% | |
| ! | TTATTCTCGTGATGCTTTTG+AGG | + | chr7_2:64907877-64907896 | Msa1069340:CDS | 35.0% |
| !! | ATTTGAGATTTCTAAGGCCT+TGG | + | chr7_2:64907910-64907929 | Msa1069340:CDS | 35.0% |
| TAATTCATGAGAAGCAACCA+AGG | - | chr7_2:64907930-64907949 | None:intergenic | 35.0% | |
| TGAGATTTCAAAGGCCTTGA+TGG | + | chr7_2:64903052-64903071 | Msa1069340:intron | 40.0% | |
| TAGTTCATGAGAAGCCATCA+AGG | - | chr7_2:64903069-64903088 | None:intergenic | 40.0% | |
| GGGTGTACATGTTACTACAT+TGG | - | chr7_2:64903095-64903114 | None:intergenic | 40.0% | |
| TGCTTATATTTGTGACCGGA+GGG | - | chr7_2:64903232-64903251 | None:intergenic | 40.0% | |
| TTGCTTATATTTGTGACCGG+AGG | - | chr7_2:64903231-64903250 | None:intergenic | 40.0% | |
| TTGCTTATATTTGTGACCGG+AGG | + | chr7_2:64903231-64903250 | Msa1069340:intron | 40.0% | |
| !!! | AGAGCAATGTTTTGGTTACG+GGG | + | chr7_2:64903553-64903572 | Msa1069340:intron | 40.0% |
| !! | CTTACGCTCAGCTATTTTGA+TGG | + | chr7_2:64903681-64903700 | Msa1069340:intron | 40.0% |
| CGAAACTGAAAAGGCCATTA+AGG | - | chr7_2:64903758-64903777 | None:intergenic | 40.0% | |
| GGAGATAGGCAAAATTTGAG+GGG | - | chr7_2:64904215-64904234 | None:intergenic | 40.0% | |
| GGGAGATAGGCAAAATTTGA+GGG | - | chr7_2:64904216-64904235 | None:intergenic | 40.0% | |
| AGGGAGATAGGCAAAATTTG+AGG | - | chr7_2:64904217-64904236 | None:intergenic | 40.0% | |
| CTCCATGAACATAACTTGGT+TGG | + | chr7_2:64904294-64904313 | Msa1069340:intron | 40.0% | |
| TGCCAACCAAGTTATGTTCA+TGG | - | chr7_2:64904299-64904318 | None:intergenic | 40.0% | |
| TGGCAACAAAGACAATGCAT+CGG | + | chr7_2:64904314-64904333 | Msa1069340:intron | 40.0% | |
| !!! | GTGCCAAATTTTGACTTTGC+TGG | + | chr7_2:64904532-64904551 | Msa1069340:intron | 40.0% |
| GCACCAGCAAAGTCAAAATT+TGG | - | chr7_2:64904538-64904557 | None:intergenic | 40.0% | |
| AGTTCACACGTTACTATCTG+TGG | + | chr7_2:64905002-64905021 | Msa1069340:intron | 40.0% | |
| TGAAAGAGATCACATGAGCT+GGG | - | chr7_2:64905077-64905096 | None:intergenic | 40.0% | |
| TTGAAAGAGATCACATGAGC+TGG | - | chr7_2:64905078-64905097 | None:intergenic | 40.0% | |
| TACTCTAGTTAAGGAAGCAG+CGG | - | chr7_2:64905291-64905310 | None:intergenic | 40.0% | |
| ! | GTCCAATTTGAAACTAGAGG+GGG | - | chr7_2:64905403-64905422 | None:intergenic | 40.0% |
| CTAATGGAGTTAGTTGTGGA+GGG | - | chr7_2:64905466-64905485 | None:intergenic | 40.0% | |
| ! | AGGAAAAGCATATCAGACCA+AGG | + | chr7_2:64905518-64905537 | Msa1069340:intron | 40.0% |
| ! | GGAAAAGCATATCAGACCAA+GGG | + | chr7_2:64905519-64905538 | Msa1069340:intron | 40.0% |
| ! | ATATACTAGAAGTGGTGCCA+TGG | - | chr7_2:64905605-64905624 | None:intergenic | 40.0% |
| ! | GCTATAAGTTGACGAATTGG+TGG | + | chr7_2:64905677-64905696 | Msa1069340:intron | 40.0% |
| ACGAATTGGTGGGGATAAAT+GGG | + | chr7_2:64905688-64905707 | Msa1069340:intron | 40.0% | |
| GAACACCTTGTCAATGTTTG+TGG | + | chr7_2:64905768-64905787 | Msa1069340:intron | 40.0% | |
| GACTACCACAAACATTGACA+AGG | - | chr7_2:64905776-64905795 | None:intergenic | 40.0% | |
| TGTCAATGTTTGTGGTAGTC+TGG | + | chr7_2:64905776-64905795 | Msa1069340:intron | 40.0% | |
| ! | TTTGTGATAGCTTTTGACGG+TGG | + | chr7_2:64905827-64905846 | Msa1069340:intron | 40.0% |
| ! | TTGTGATAGCTTTTGACGGT+GGG | + | chr7_2:64905828-64905847 | Msa1069340:intron | 40.0% |
| CATGAGTGATCACTCATTCA+TGG | + | chr7_2:64905898-64905917 | Msa1069340:intron | 40.0% | |
| ATTAGGGAAGATACGTTCCT+AGG | + | chr7_2:64906108-64906127 | Msa1069340:intron | 40.0% | |
| TCCTAGGTTACTCCTTGTTA+CGG | + | chr7_2:64906124-64906143 | Msa1069340:intron | 40.0% | |
| ATATATCACCTCCCGTAACA+AGG | - | chr7_2:64906139-64906158 | None:intergenic | 40.0% | |
| AGCTAAACAGAGTTAACAGC+AGG | + | chr7_2:64906188-64906207 | Msa1069340:intron | 40.0% | |
| GCTAAACAGAGTTAACAGCA+GGG | + | chr7_2:64906189-64906208 | Msa1069340:intron | 40.0% | |
| CTAAACAGAGTTAACAGCAG+GGG | + | chr7_2:64906190-64906209 | Msa1069340:intron | 40.0% | |
| TACCAACTGAGCTACACTTA+CGG | - | chr7_2:64906389-64906408 | None:intergenic | 40.0% | |
| ! | GGTAGAGATAATTTGTGCAG+GGG | + | chr7_2:64906405-64906424 | Msa1069340:intron | 40.0% |
| CCCACATGCAACTTATTAAC+TGG | + | chr7_2:64906928-64906947 | Msa1069340:intron | 40.0% | |
| AATAGAGCTCGTTCCATGAT+AGG | - | chr7_2:64907119-64907138 | None:intergenic | 40.0% | |
| ! | TGAATTATTGGTGGGTGACT+CGG | - | chr7_2:64907377-64907396 | None:intergenic | 40.0% |
| GAATTGGTGCGTGTTTGAAT+AGG | - | chr7_2:64907480-64907499 | None:intergenic | 40.0% | |
| !! | AAGAGTGCTTGGGATTATGA+AGG | - | chr7_2:64907557-64907576 | None:intergenic | 40.0% |
| !! | CATCATGATGAAGAGTGCTT+GGG | - | chr7_2:64907567-64907586 | None:intergenic | 40.0% |
| !! | TCATCATGATGAAGAGTGCT+TGG | - | chr7_2:64907568-64907587 | None:intergenic | 40.0% |
| CTTCATCATGATGAAAAGCG+TGG | + | chr7_2:64907574-64907593 | Msa1069340:intron | 40.0% | |
| ! | CATGATGAAAAGCGTGGAAA+TGG | + | chr7_2:64907580-64907599 | Msa1069340:intron | 40.0% |
| !! | AGGTTCTAAGGTTGAGAAGA+AGG | + | chr7_2:64907696-64907715 | Msa1069340:CDS | 40.0% |
| GAGTAGTTCCAAGGTTAACA+TGG | + | chr7_2:64907732-64907751 | Msa1069340:CDS | 40.0% | |
| CTAATAGCCCATGTTAACCT+TGG | - | chr7_2:64907743-64907762 | None:intergenic | 40.0% | |
| ! | CAAGGTTAACATGGGCTATT+AGG | + | chr7_2:64907741-64907760 | Msa1069340:CDS | 40.0% |
| ACGATCCTTAGTTCCAAAGA+TGG | - | chr7_2:64907840-64907859 | None:intergenic | 40.0% | |
| GTAGTAACATGTACACCCTC+CGG | + | chr7_2:64903097-64903116 | Msa1069340:intron | 45.0% | |
| GGGAATGAGCAAAAACAGAC+AGG | - | chr7_2:64903603-64903622 | None:intergenic | 45.0% | |
| AGACTAGGCCGAAACTGAAA+AGG | - | chr7_2:64903767-64903786 | None:intergenic | 45.0% | |
| TTTCGGCCTAGTCTACAATG+TGG | + | chr7_2:64903773-64903792 | Msa1069340:intron | 45.0% | |
| GCCTAGTCTACAATGTGGAT+GGG | + | chr7_2:64903778-64903797 | Msa1069340:intron | 45.0% | |
| CAACACATCCACCGTGTAAT+GGG | - | chr7_2:64904653-64904672 | None:intergenic | 45.0% | |
| CATTACACGGTGGATGTGTT+GGG | + | chr7_2:64904652-64904671 | Msa1069340:intron | 45.0% | |
| ! | GACCCCCTCTAGTTTCAAAT+TGG | + | chr7_2:64905398-64905417 | Msa1069340:intron | 45.0% |
| GCTAATGGAGTTAGTTGTGG+AGG | - | chr7_2:64905467-64905486 | None:intergenic | 45.0% | |
| !! | TGGTTTTTGCAGTCTAGGGT+GGG | - | chr7_2:64905585-64905604 | None:intergenic | 45.0% |
| ! | ATGGTTTTTGCAGTCTAGGG+TGG | - | chr7_2:64905586-64905605 | None:intergenic | 45.0% |
| ACCCTAGACTGCAAAAACCA+TGG | + | chr7_2:64905585-64905604 | Msa1069340:intron | 45.0% | |
| ! | GCCATGGTTTTTGCAGTCTA+GGG | - | chr7_2:64905589-64905608 | None:intergenic | 45.0% |
| ! | TGCCATGGTTTTTGCAGTCT+AGG | - | chr7_2:64905590-64905609 | None:intergenic | 45.0% |
| ! | CGGTTGATATCTAATGTGGC+AGG | + | chr7_2:64905633-64905652 | Msa1069340:intron | 45.0% |
| GACGAATTGGTGGGGATAAA+TGG | + | chr7_2:64905687-64905706 | Msa1069340:intron | 45.0% | |
| TAGAAGGGAGACACGATGTT+TGG | + | chr7_2:64905731-64905750 | Msa1069340:intron | 45.0% | |
| AGAAGGGAGACACGATGTTT+GGG | + | chr7_2:64905732-64905751 | Msa1069340:intron | 45.0% | |
| CAATGTTTGTGGTAGTCTGG+TGG | + | chr7_2:64905779-64905798 | Msa1069340:intron | 45.0% | |
| GGTTCAGTGTTCTTGTGAGA+GGG | + | chr7_2:64905849-64905868 | Msa1069340:intron | 45.0% | |
| ! | GAGTGATGATGTGGGTTGTT+TGG | + | chr7_2:64905998-64906017 | Msa1069340:intron | 45.0% |
| GTTGACCACTGAGATTCACA+TGG | + | chr7_2:64906078-64906097 | Msa1069340:intron | 45.0% | |
| TCAAGCCATGTGAATCTCAG+TGG | - | chr7_2:64906086-64906105 | None:intergenic | 45.0% | |
| CCTAGGTTACTCCTTGTTAC+GGG | + | chr7_2:64906125-64906144 | Msa1069340:intron | 45.0% | |
| ACCAACTGAGCTACACTTAC+GGG | - | chr7_2:64906388-64906407 | None:intergenic | 45.0% | |
| TGCATATGATGTGAGCGTGT+GGG | - | chr7_2:64907353-64907372 | None:intergenic | 45.0% | |
| ATGCATATGATGTGAGCGTG+TGG | - | chr7_2:64907354-64907373 | None:intergenic | 45.0% | |
| AGTGCTTGGGATTATGAAGG+AGG | - | chr7_2:64907554-64907573 | None:intergenic | 45.0% | |
| CACTGATACCTAAACCAACG+AGG | + | chr7_2:64907606-64907625 | Msa1069340:CDS | 45.0% | |
| !! | CGTAAGTACCTCGTTGGTTT+AGG | - | chr7_2:64907617-64907636 | None:intergenic | 45.0% |
| ! | AACCAACGAGGTACTTACGA+AGG | + | chr7_2:64907618-64907637 | Msa1069340:CDS | 45.0% |
| GAAGGAAGACGAAGGTTCTA+AGG | + | chr7_2:64907684-64907703 | Msa1069340:CDS | 45.0% | |
| TAAGGTTGAGAAGAAGGCAG+TGG | + | chr7_2:64907702-64907721 | Msa1069340:CDS | 45.0% | |
| GGAGGATAAGAGTAGTTCCA+AGG | + | chr7_2:64907723-64907742 | Msa1069340:CDS | 45.0% | |
| !! | AAATTTACTTATAAAAATAA+GGG | + | chr7_2:64905331-64905350 | Msa1069340:intron | 5.0% |
| !!! | AAATAATGTTTATATTTTAA+CGG | + | chr7_2:64906164-64906183 | Msa1069340:intron | 5.0% |
| GGATTATGCCTGTGATGCGT+TGG | + | chr7_2:64903012-64903031 | Msa1069340:CDS | 50.0% | |
| TTATGCCTGTGATGCGTTGG+AGG | + | chr7_2:64903015-64903034 | Msa1069340:CDS | 50.0% | |
| CTTAACCTCCAACGCATCAC+AGG | - | chr7_2:64903023-64903042 | None:intergenic | 50.0% | |
| ACGTAGGTGTACTTCTCAGC+GGG | - | chr7_2:64903623-64903642 | None:intergenic | 50.0% | |
| CACGTAGGTGTACTTCTCAG+CGG | - | chr7_2:64903624-64903643 | None:intergenic | 50.0% | |
| GGCCTAGTCTACAATGTGGA+TGG | + | chr7_2:64903777-64903796 | Msa1069340:intron | 50.0% | |
| GCCCATCCACATTGTAGACT+AGG | - | chr7_2:64903782-64903801 | None:intergenic | 50.0% | |
| CTGAGTTTCCCATTACACGG+TGG | + | chr7_2:64904642-64904661 | Msa1069340:intron | 50.0% | |
| CCAACACATCCACCGTGTAA+TGG | - | chr7_2:64904654-64904673 | None:intergenic | 50.0% | |
| CCATTACACGGTGGATGTGT+TGG | + | chr7_2:64904651-64904670 | Msa1069340:intron | 50.0% | |
| ATGGAGTTAGTTGTGGAGGG+AGG | - | chr7_2:64905463-64905482 | None:intergenic | 50.0% | |
| !! | GGTTTTTGCAGTCTAGGGTG+GGG | - | chr7_2:64905584-64905603 | None:intergenic | 50.0% |
| GGGTTCAGTGTTCTTGTGAG+AGG | + | chr7_2:64905848-64905867 | Msa1069340:intron | 50.0% | |
| CCCGTAACAAGGAGTAACCT+AGG | - | chr7_2:64906128-64906147 | None:intergenic | 50.0% | |
| AGGTTACTCCTTGTTACGGG+AGG | + | chr7_2:64906128-64906147 | Msa1069340:intron | 50.0% | |
| AACAGAGTTAACAGCAGGGG+AGG | + | chr7_2:64906193-64906212 | Msa1069340:intron | 50.0% | |
| TCCCGTAAGTGTAGCTCAGT+TGG | + | chr7_2:64906384-64906403 | Msa1069340:intron | 50.0% | |
| ! | GAAGGAGGAAGTGTGAGAAG+AGG | - | chr7_2:64907539-64907558 | None:intergenic | 50.0% |
| ! | CAACGAGGTACTTACGAAGG+CGG | + | chr7_2:64907621-64907640 | Msa1069340:CDS | 50.0% |
| CTTCCTTCCATCACCAGTGA+CGG | - | chr7_2:64907672-64907691 | None:intergenic | 50.0% | |
| !! | TGGTGATGGAAGGAAGACGA+AGG | + | chr7_2:64907676-64907695 | Msa1069340:CDS | 50.0% |
| CGGCGTGAGTTAACTCACGT+AGG | - | chr7_2:64903639-64903658 | None:intergenic | 55.0% | |
| CAACAAACTCATCGCCGCCA+TGG | - | chr7_2:64906062-64906081 | None:intergenic | 55.0% | |
| GCAGGGGTCACTAGACTACT+TGG | + | chr7_2:64906421-64906440 | Msa1069340:intron | 55.0% | |
| CGCCTTCGTAAGTACCTCGT+TGG | - | chr7_2:64907623-64907642 | None:intergenic | 55.0% | |
| GCGATATCAGCGACTCGATG+AGG | + | chr7_2:64907643-64907662 | Msa1069340:CDS | 55.0% | |
| GGTTGAGAAGAAGGCAGTGG+AGG | + | chr7_2:64907705-64907724 | Msa1069340:CDS | 55.0% | |
| ACGGTAGCGAACTGCCGTTG+AGG | + | chr7_2:64903483-64903502 | Msa1069340:intron | 60.0% | |
| CGGTAGCGAACTGCCGTTGA+GGG | + | chr7_2:64903484-64903503 | Msa1069340:intron | 60.0% | |
| !! | ACGCCGTCACTGGTGATGGA+AGG | + | chr7_2:64907666-64907685 | Msa1069340:CDS | 60.0% |
| CTCGATGAGGACGCCGTCAC+TGG | + | chr7_2:64907656-64907675 | Msa1069340:CDS | 65.0% | |
| GAGGACGCCGTCACTGGTGA+TGG | + | chr7_2:64907662-64907681 | Msa1069340:CDS | 65.0% |
| Chromosome | Type | Strat | End | Strand | Name |
|---|---|---|---|---|---|
| chr7_2 | gene | 64902914 | 64907964 | 64902914 | ID=Msa1069340;Name=Msa1069340 |
| chr7_2 | mRNA | 64902914 | 64907964 | 64902914 | ID=Msa1069340-mRNA-1;Parent=Msa1069340;Name=Msa1069340-mRNA-1;_AED=0.22;_eAED=0.22;_QI=0|0|0|1|0|0|2|0|160 |
| chr7_2 | exon | 64902914 | 64903036 | 64902914 | ID=Msa1069340-mRNA-1:exon:13622;Parent=Msa1069340-mRNA-1 |
| chr7_2 | exon | 64907605 | 64907964 | 64907605 | ID=Msa1069340-mRNA-1:exon:13623;Parent=Msa1069340-mRNA-1 |
| chr7_2 | CDS | 64902914 | 64903036 | 64902914 | ID=Msa1069340-mRNA-1:cds;Parent=Msa1069340-mRNA-1 |
| chr7_2 | CDS | 64907605 | 64907964 | 64907605 | ID=Msa1069340-mRNA-1:cds;Parent=Msa1069340-mRNA-1 |
| Gene Sequence |
| Protein sequence |
