Alfalfa Gene Editing Database
Alfalfa Gene Editing Database
| Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa0618550 | XP_003629835.1 | 95.556 | 225 | 9 | 1 | 1 | 225 | 2 | 225 | 3.45e-154 | 437 |
| Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa0618550 | sp|P32110|GSTX6_SOYBN | 47.297 | 222 | 113 | 3 | 3 | 222 | 5 | 224 | 3.87e-65 | 204 |
| Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa0618550 | G7L788 | 95.556 | 225 | 9 | 1 | 1 | 225 | 2 | 225 | 1.65e-154 | 437 |
| Gene ID | Type | Classification |
|---|
| Gene ID | Type | Classification |
|---|
Co-expression Network
| Gene1 | Gene2 | correlation coefficient | p_value | FDR |
|---|---|---|---|---|
| Msa0005260 | Msa0618550 | 0.808597 | 2.864229e-50 | -8.615850e-47 |
| Msa0030050 | Msa0618550 | 0.802273 | 6.066634e-49 | -8.615850e-47 |
| Msa0052780 | Msa0618550 | 0.864740 | 9.784055e-65 | -8.615850e-47 |
| Msa0095940 | Msa0618550 | 0.811945 | 5.430994e-51 | -8.615850e-47 |
| Msa0097570 | Msa0618550 | 0.864636 | 1.054345e-64 | -8.615850e-47 |
| Msa0611060 | Msa0618550 | 0.869076 | 4.059697e-66 | -8.615850e-47 |
| Msa0618550 | Msa0626920 | 0.803198 | 3.908212e-49 | -8.615850e-47 |
| Msa0618550 | Msa0631130 | 0.801973 | 6.991469e-49 | -8.615850e-47 |
| Msa0618550 | Msa0655940 | 0.811818 | 5.788057e-51 | -8.615850e-47 |
| Msa0618550 | Msa0657340 | 0.917870 | 3.133947e-86 | -8.615850e-47 |
| Msa0618550 | Msa0701430 | 0.867132 | 1.714647e-65 | -8.615850e-47 |
| Msa0618550 | Msa0713060 | 0.843580 | 1.283761e-58 | -8.615850e-47 |
| Msa0618550 | Msa0731690 | 0.807163 | 5.780384e-50 | -8.615850e-47 |
| Msa0618550 | Msa0737430 | 0.811925 | 5.484693e-51 | -8.615850e-47 |
| Msa0618550 | Msa0744640 | 0.839288 | 1.733036e-57 | -8.615850e-47 |
| Msa0618550 | Msa0744710 | 0.802555 | 5.307342e-49 | -8.615850e-47 |
| Msa0618550 | Msa0816630 | 0.839619 | 1.422106e-57 | -8.615850e-47 |
| Msa0618550 | Msa0826240 | 0.800839 | 1.194034e-48 | -8.615850e-47 |
| Msa0618550 | Msa0826380 | 0.818118 | 2.315799e-52 | -8.615850e-47 |
| Msa0618550 | Msa0829990 | 0.817642 | 2.965599e-52 | -8.615850e-47 |
| Msa0618550 | Msa0833270 | 0.813310 | 2.730647e-51 | -8.615850e-47 |
| Msa0618550 | Msa0841730 | 0.837466 | 5.111852e-57 | -8.615850e-47 |
| Msa0618550 | Msa0863940 | 0.841281 | 5.226257e-58 | -8.615850e-47 |
| Msa0618550 | Msa0865820 | 0.800462 | 1.424920e-48 | -8.615850e-47 |
| Msa0618550 | Msa1027340 | 0.831886 | 1.294141e-55 | -8.615850e-47 |
| Msa0618550 | Msa1027400 | 0.836653 | 8.248059e-57 | -8.615850e-47 |
| Msa0618550 | Msa1030210 | 0.800944 | 1.136331e-48 | -8.615850e-47 |
| Msa0618550 | Msa1058200 | 0.805470 | 1.314382e-49 | -8.615850e-47 |
| Msa0618550 | Msa1069340 | 0.802980 | 4.337246e-49 | -8.615850e-47 |
| Msa0618550 | Msa1075090 | 0.803161 | 3.978226e-49 | -8.615850e-47 |
| Msa0618550 | Msa1077970 | 0.807043 | 6.128714e-50 | -8.615850e-47 |
| Msa0618550 | Msa1102210 | 0.801324 | 9.499392e-49 | -8.615850e-47 |
| Msa0618550 | Msa1107220 | 0.811159 | 8.047382e-51 | -8.615850e-47 |
| Msa0618550 | Msa1113100 | 0.814006 | 1.919006e-51 | -8.615850e-47 |
| Msa0618550 | Msa1115980 | 0.800041 | 1.736034e-48 | -8.615850e-47 |
| Msa0618550 | Msa1120580 | 0.815879 | 7.372915e-52 | -8.615850e-47 |
| Msa0618550 | Msa1131430 | 0.827851 | 1.244798e-54 | -8.615850e-47 |
| Msa0618550 | Msa1150760 | 0.817200 | 3.730785e-52 | -8.615850e-47 |
| Msa0618550 | Msa1154570 | 0.832451 | 9.385329e-56 | -8.615850e-47 |
| Msa0618550 | Msa1157110 | 0.820510 | 6.601607e-53 | -8.615850e-47 |
| Msa0618550 | Msa1157200 | 0.814970 | 1.174254e-51 | -8.615850e-47 |
| Msa0618550 | Msa1159170 | 0.808661 | 2.775966e-50 | -8.615850e-47 |
| Msa0618550 | Msa1173150 | 0.863399 | 2.560066e-64 | -8.615850e-47 |
| Msa0618550 | Msa1174280 | 0.810595 | 1.066291e-50 | -8.615850e-47 |
| Msa0618550 | Msa1187490 | 0.818658 | 1.747589e-52 | -8.615850e-47 |
| Msa0618550 | Msa1199870 | 0.816191 | 6.280018e-52 | -8.615850e-47 |
| Msa0618550 | Msa1202110 | 0.839387 | 1.633720e-57 | -8.615850e-47 |
| Msa0618550 | Msa1217260 | 0.821171 | 4.652745e-53 | -8.615850e-47 |
| Msa0618550 | Msa1221220 | 0.860809 | 1.594250e-63 | -8.615850e-47 |
| Msa0618550 | Msa1221240 | 0.805629 | 1.217029e-49 | -8.615850e-47 |
| Msa0618550 | Msa1225580 | 0.804561 | 2.036762e-49 | -8.615850e-47 |
| Msa0618550 | Msa1252810 | 0.841202 | 5.483466e-58 | -8.615850e-47 |
| Msa0618550 | Msa1254870 | 0.835304 | 1.813932e-56 | -8.615850e-47 |
| Msa0618550 | Msa1262540 | 0.806498 | 7.990590e-50 | -8.615850e-47 |
| Msa0618550 | Msa1276960 | 0.807836 | 4.161120e-50 | -8.615850e-47 |
| Msa0618550 | Msa1328430 | 0.834391 | 3.079268e-56 | -8.615850e-47 |
| Msa0618550 | Msa1357570 | 0.810347 | 1.205965e-50 | -8.615850e-47 |
| Msa0618550 | Msa1369320 | 0.816754 | 4.699068e-52 | -8.615850e-47 |
| Msa0618550 | Msa1401110 | 0.834517 | 2.863845e-56 | -8.615850e-47 |
| Msa0618550 | Msa1404050 | 0.836148 | 1.109156e-56 | -8.615850e-47 |
| Msa0618550 | Msa1405530 | 0.825211 | 5.304092e-54 | -8.615850e-47 |
| Msa0618550 | Msa1412410 | 0.819176 | 1.332443e-52 | -8.615850e-47 |
| Msa0618550 | Msa1413150 | 0.800681 | 1.285836e-48 | -8.615850e-47 |
| Msa0618550 | Msa1413800 | 0.811733 | 6.041249e-51 | -8.615850e-47 |
| Msa0618550 | Msa1422230 | 0.806620 | 7.529954e-50 | -8.615850e-47 |
| Msa0618550 | Msa1427860 | 0.812874 | 3.403665e-51 | -8.615850e-47 |
| Msa0618550 | Msa1435320 | 0.821082 | 4.876860e-53 | -8.615850e-47 |
| Msa0618550 | Msa1436090 | 0.812925 | 3.317186e-51 | -8.615850e-47 |
| Msa0618550 | Msa1443400 | 0.819733 | 9.947912e-53 | -8.615850e-47 |
| Msa0618550 | Msa1448040 | 0.821820 | 3.294901e-53 | -8.615850e-47 |
| Msa0618550 | Msa1459920 | 0.823325 | 1.471881e-53 | -8.615850e-47 |
| Msa0125260 | Msa0618550 | 0.805005 | 1.644555e-49 | -8.615850e-47 |
| Msa0129640 | Msa0618550 | 0.816894 | 4.370054e-52 | -8.615850e-47 |
| Msa0145430 | Msa0618550 | 0.846020 | 2.823428e-59 | -8.615850e-47 |
| Msa0150640 | Msa0618550 | 0.810259 | 1.260105e-50 | -8.615850e-47 |
| Msa0166260 | Msa0618550 | 0.805316 | 1.416069e-49 | -8.615850e-47 |
| Msa0170770 | Msa0618550 | 0.801847 | 7.422387e-49 | -8.615850e-47 |
| Msa0186240 | Msa0618550 | 0.816287 | 5.976330e-52 | -8.615850e-47 |
| Msa0203090 | Msa0618550 | 0.856600 | 2.883364e-62 | -8.615850e-47 |
| Msa0366780 | Msa0618550 | 0.811254 | 7.673867e-51 | -8.615850e-47 |
| Msa0383900 | Msa0618550 | 0.813848 | 2.079433e-51 | -8.615850e-47 |
| Msa0393100 | Msa0618550 | 0.842196 | 2.996909e-58 | -8.615850e-47 |
| Msa0400010 | Msa0618550 | 0.802161 | 6.398096e-49 | -8.615850e-47 |
| Msa0402800 | Msa0618550 | 0.811743 | 6.008319e-51 | -8.615850e-47 |
| Msa0414730 | Msa0618550 | 0.812884 | 3.386000e-51 | -8.615850e-47 |
| Msa0434300 | Msa0618550 | 0.824694 | 7.024291e-54 | -8.615850e-47 |
| Msa0434400 | Msa0618550 | 0.826699 | 2.351054e-54 | -8.615850e-47 |
| Msa0443450 | Msa0618550 | 0.862479 | 4.923485e-64 | -8.615850e-47 |
| Msa0447160 | Msa0618550 | 0.805815 | 1.112602e-49 | -8.615850e-47 |
| Msa0242720 | Msa0618550 | 0.804166 | 2.460892e-49 | -8.615850e-47 |
| Msa0246140 | Msa0618550 | 0.850847 | 1.303061e-60 | -8.615850e-47 |
| Msa0265480 | Msa0618550 | 0.840066 | 1.087835e-57 | -8.615850e-47 |
| Msa0284730 | Msa0618550 | 0.823405 | 1.409792e-53 | -8.615850e-47 |
| Msa0285890 | Msa0618550 | 0.808092 | 3.669975e-50 | -8.615850e-47 |
| Msa0306310 | Msa0618550 | 0.828168 | 1.044398e-54 | -8.615850e-47 |
| Msa0319680 | Msa0618550 | 0.824618 | 7.319536e-54 | -8.615850e-47 |
| Msa0320170 | Msa0618550 | 0.822807 | 1.943739e-53 | -8.615850e-47 |
| Msa0324810 | Msa0618550 | 0.810523 | 1.104955e-50 | -8.615850e-47 |
| Msa0332360 | Msa0618550 | 0.813771 | 2.161729e-51 | -8.615850e-47 |
| Msa0340370 | Msa0618550 | 0.844199 | 8.767240e-59 | -8.615850e-47 |
| Msa0345890 | Msa0618550 | 0.821852 | 3.239617e-53 | -8.615850e-47 |
| Msa0345980 | Msa0618550 | 0.810037 | 1.406391e-50 | -8.615850e-47 |
| Msa0488580 | Msa0618550 | 0.860023 | 2.757901e-63 | -8.615850e-47 |
| Msa0493870 | Msa0618550 | 0.803783 | 2.956671e-49 | -8.615850e-47 |
| Msa0497690 | Msa0618550 | 0.811536 | 6.665951e-51 | -8.615850e-47 |
| Msa0497860 | Msa0618550 | 0.828148 | 1.055982e-54 | -8.615850e-47 |
| Msa0506370 | Msa0618550 | 0.813625 | 2.327946e-51 | -8.615850e-47 |
| Msa0522140 | Msa0618550 | 0.822328 | 2.512832e-53 | -8.615850e-47 |
| Msa0522170 | Msa0618550 | 0.822401 | 2.416702e-53 | -8.615850e-47 |
| Msa0565180 | Msa0618550 | 0.857825 | 1.253118e-62 | -8.615850e-47 |
| Msa0576560 | Msa0618550 | 0.812786 | 3.558840e-51 | -8.615850e-47 |
| Msa0590810 | Msa0618550 | 0.801213 | 1.001152e-48 | -8.615850e-47 |
PPI
| Gene1 | Gene2 | Type |
|---|
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa0618550 | MtrunA17_Chr8g0379561 | 95.556 | 225 | 9 | 1 | 1 | 225 | 2 | 225 | 3.18e-158 | 437 |
| Msa0618550 | MtrunA17_Chr8g0379581 | 63.839 | 224 | 80 | 1 | 1 | 224 | 1 | 223 | 1.94e-95 | 278 |
| Msa0618550 | MtrunA17_Chr6g0483141 | 52.885 | 208 | 95 | 2 | 5 | 211 | 3 | 208 | 1.28e-71 | 217 |
| Msa0618550 | MtrunA17_Chr7g0240681 | 48.113 | 212 | 106 | 3 | 2 | 211 | 4 | 213 | 1.03e-63 | 197 |
| Msa0618550 | MtrunA17_Chr4g0008781 | 49.048 | 210 | 106 | 1 | 2 | 211 | 5 | 213 | 1.56e-62 | 194 |
| Msa0618550 | MtrunA17_Chr7g0240691 | 43.111 | 225 | 124 | 3 | 2 | 224 | 34 | 256 | 4.56e-61 | 192 |
| Msa0618550 | MtrunA17_Chr1g0196771 | 46.330 | 218 | 113 | 3 | 4 | 219 | 2 | 217 | 5.68e-60 | 188 |
| Msa0618550 | MtrunA17_Chr3g0132581 | 46.890 | 209 | 110 | 1 | 1 | 209 | 1 | 208 | 7.75e-60 | 187 |
| Msa0618550 | MtrunA17_Chr7g0240561 | 45.370 | 216 | 115 | 3 | 1 | 215 | 3 | 216 | 1.03e-59 | 187 |
| Msa0618550 | MtrunA17_Chr7g0240641 | 44.651 | 215 | 115 | 4 | 3 | 215 | 4 | 216 | 2.39e-59 | 186 |
| Msa0618550 | MtrunA17_Chr4g0008791 | 45.249 | 221 | 118 | 3 | 5 | 224 | 7 | 225 | 3.24e-59 | 186 |
| Msa0618550 | MtrunA17_Chr7g0240631 | 44.186 | 215 | 116 | 4 | 3 | 215 | 4 | 216 | 9.20e-59 | 185 |
| Msa0618550 | MtrunA17_Chr7g0240581 | 46.512 | 215 | 112 | 3 | 2 | 215 | 4 | 216 | 1.25e-57 | 182 |
| Msa0618550 | MtrunA17_Chr1g0212301 | 45.413 | 218 | 115 | 3 | 5 | 219 | 3 | 219 | 2.45e-56 | 178 |
| Msa0618550 | MtrunA17_Chr7g0240611 | 41.892 | 222 | 122 | 4 | 4 | 224 | 6 | 221 | 7.01e-56 | 177 |
| Msa0618550 | MtrunA17_Chr7g0240551 | 45.540 | 213 | 113 | 3 | 4 | 215 | 6 | 216 | 8.65e-56 | 177 |
| Msa0618550 | MtrunA17_Chr7g0240511 | 44.091 | 220 | 115 | 4 | 4 | 222 | 6 | 218 | 2.62e-54 | 173 |
| Msa0618550 | MtrunA17_Chr1g0196661 | 43.636 | 220 | 121 | 2 | 5 | 222 | 3 | 221 | 1.24e-53 | 172 |
| Msa0618550 | MtrunA17_Chr7g0240531 | 44.037 | 218 | 117 | 5 | 4 | 219 | 6 | 220 | 3.98e-53 | 170 |
| Msa0618550 | MtrunA17_Chr7g0240671 | 44.444 | 207 | 108 | 4 | 6 | 211 | 5 | 205 | 9.72e-53 | 169 |
| Msa0618550 | MtrunA17_Chr7g0240541 | 43.318 | 217 | 120 | 3 | 4 | 219 | 6 | 220 | 2.13e-51 | 166 |
| Msa0618550 | MtrunA17_Chr7g0240651 | 38.117 | 223 | 131 | 4 | 3 | 224 | 5 | 221 | 7.64e-51 | 164 |
| Msa0618550 | MtrunA17_Chr5g0417011 | 41.315 | 213 | 118 | 3 | 3 | 209 | 5 | 216 | 1.46e-50 | 164 |
| Msa0618550 | MtrunA17_Chr1g0196691 | 43.602 | 211 | 115 | 3 | 5 | 212 | 28 | 237 | 1.86e-50 | 164 |
| Msa0618550 | MtrunA17_Chr2g0312771 | 44.878 | 205 | 109 | 3 | 5 | 208 | 4 | 205 | 2.40e-50 | 163 |
| Msa0618550 | MtrunA17_Chr7g0240521 | 45.701 | 221 | 107 | 5 | 4 | 218 | 13 | 226 | 3.78e-50 | 163 |
| Msa0618550 | MtrunA17_Chr4g0029341 | 43.172 | 227 | 111 | 5 | 1 | 218 | 1 | 218 | 7.92e-50 | 162 |
| Msa0618550 | MtrunA17_Chr2g0312751 | 44.390 | 205 | 110 | 3 | 5 | 208 | 4 | 205 | 2.52e-49 | 160 |
| Msa0618550 | MtrunA17_Chr2g0312721 | 43.694 | 222 | 117 | 4 | 5 | 225 | 4 | 218 | 6.60e-49 | 159 |
| Msa0618550 | MtrunA17_Chr2g0312781 | 44.118 | 204 | 110 | 3 | 6 | 208 | 22 | 222 | 8.03e-48 | 157 |
| Msa0618550 | MtrunA17_Chr2g0312791 | 39.815 | 216 | 126 | 3 | 5 | 218 | 4 | 217 | 4.42e-47 | 155 |
| Msa0618550 | MtrunA17_Chr1g0196711 | 40.278 | 216 | 126 | 2 | 5 | 218 | 3 | 217 | 6.85e-46 | 152 |
| Msa0618550 | MtrunA17_Chr1g0196721 | 42.788 | 208 | 116 | 2 | 6 | 211 | 3 | 209 | 7.76e-46 | 151 |
| Msa0618550 | MtrunA17_Chr7g0240661 | 42.927 | 205 | 110 | 4 | 4 | 207 | 6 | 204 | 1.80e-45 | 150 |
| Msa0618550 | MtrunA17_Chr2g0312731 | 40.488 | 205 | 118 | 3 | 5 | 208 | 4 | 205 | 3.51e-45 | 150 |
| Msa0618550 | MtrunA17_Chr5g0415411 | 38.182 | 220 | 127 | 4 | 1 | 212 | 1 | 219 | 1.32e-44 | 149 |
| Msa0618550 | MtrunA17_Chr2g0312811 | 44.385 | 187 | 97 | 5 | 5 | 187 | 4 | 187 | 3.54e-43 | 145 |
| Msa0618550 | MtrunA17_Chr3g0107731 | 45.109 | 184 | 98 | 2 | 5 | 187 | 9 | 190 | 3.94e-43 | 145 |
| Msa0618550 | MtrunA17_Chr2g0312681 | 41.935 | 186 | 103 | 4 | 4 | 187 | 3 | 185 | 4.42e-42 | 142 |
| Msa0618550 | MtrunA17_Chr8g0363751 | 41.014 | 217 | 119 | 6 | 1 | 209 | 1 | 216 | 7.08e-42 | 142 |
| Msa0618550 | MtrunA17_Chr4g0069471 | 45.902 | 183 | 93 | 3 | 5 | 185 | 25 | 203 | 9.64e-42 | 140 |
| Msa0618550 | MtrunA17_Chr8g0357241 | 42.021 | 188 | 106 | 2 | 4 | 190 | 3 | 188 | 1.43e-41 | 140 |
| Msa0618550 | MtrunA17_Chr8g0357211 | 48.387 | 155 | 79 | 1 | 4 | 157 | 3 | 157 | 3.65e-41 | 139 |
| Msa0618550 | MtrunA17_Chr3g0107741 | 43.085 | 188 | 104 | 2 | 1 | 187 | 5 | 190 | 2.00e-39 | 135 |
| Msa0618550 | MtrunA17_Chr2g0312691 | 40.000 | 210 | 118 | 6 | 4 | 211 | 3 | 206 | 3.18e-37 | 129 |
| Msa0618550 | MtrunA17_Chr2g0312711 | 41.622 | 185 | 104 | 3 | 4 | 187 | 3 | 184 | 1.02e-36 | 128 |
| Msa0618550 | MtrunA17_Chr5g0433801 | 39.037 | 187 | 111 | 2 | 2 | 187 | 3 | 187 | 1.66e-36 | 127 |
| Msa0618550 | MtrunA17_Chr8g0391631 | 45.912 | 159 | 78 | 5 | 1 | 151 | 17 | 175 | 1.78e-33 | 118 |
| Msa0618550 | MtrunA17_Chr2g0313561 | 48.649 | 74 | 34 | 3 | 48 | 118 | 1 | 73 | 1.87e-17 | 73.9 |
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa0618550 | AT2G29420.1 | 44.037 | 218 | 121 | 1 | 3 | 220 | 7 | 223 | 7.23e-64 | 198 |
| Msa0618550 | AT2G29460.1 | 46.188 | 223 | 116 | 3 | 2 | 222 | 4 | 224 | 1.99e-62 | 194 |
| Msa0618550 | AT2G29490.1 | 48.571 | 210 | 104 | 3 | 2 | 209 | 4 | 211 | 5.70e-62 | 193 |
| Msa0618550 | AT2G29480.1 | 45.740 | 223 | 117 | 3 | 2 | 222 | 4 | 224 | 5.76e-62 | 193 |
| Msa0618550 | AT2G29450.1 | 46.847 | 222 | 113 | 4 | 4 | 222 | 5 | 224 | 1.46e-60 | 189 |
| Msa0618550 | AT2G29440.1 | 45.740 | 223 | 117 | 3 | 2 | 222 | 3 | 223 | 7.23e-60 | 188 |
| Msa0618550 | AT3G09270.1 | 46.667 | 210 | 109 | 3 | 2 | 209 | 3 | 211 | 2.12e-58 | 184 |
| Msa0618550 | AT2G29470.1 | 45.498 | 211 | 110 | 4 | 2 | 209 | 4 | 212 | 2.10e-55 | 176 |
| Msa0618550 | AT1G17170.1 | 42.791 | 215 | 118 | 4 | 5 | 218 | 4 | 214 | 1.94e-49 | 161 |
| Msa0618550 | AT1G59670.1 | 43.662 | 213 | 111 | 5 | 4 | 208 | 5 | 216 | 1.28e-47 | 157 |
| Msa0618550 | AT1G17180.1 | 41.148 | 209 | 119 | 3 | 5 | 212 | 4 | 209 | 2.28e-47 | 156 |
| Msa0618550 | AT1G10370.1 | 42.081 | 221 | 120 | 4 | 1 | 214 | 1 | 220 | 4.65e-47 | 155 |
| Msa0618550 | AT1G59700.1 | 43.564 | 202 | 106 | 4 | 4 | 197 | 5 | 206 | 6.38e-46 | 152 |
| Msa0618550 | AT1G78370.1 | 39.806 | 206 | 120 | 3 | 8 | 212 | 7 | 209 | 1.69e-45 | 151 |
| Msa0618550 | AT1G17190.1 | 40.359 | 223 | 129 | 3 | 1 | 222 | 1 | 220 | 4.02e-45 | 150 |
| Msa0618550 | AT1G78380.1 | 42.000 | 200 | 103 | 3 | 4 | 202 | 3 | 190 | 5.06e-45 | 150 |
| Msa0618550 | AT1G78340.1 | 43.169 | 183 | 101 | 3 | 5 | 186 | 4 | 184 | 3.26e-44 | 147 |
| Msa0618550 | AT1G53680.1 | 43.617 | 188 | 101 | 3 | 3 | 187 | 5 | 190 | 2.94e-43 | 145 |
| Msa0618550 | AT1G74590.1 | 38.164 | 207 | 122 | 3 | 13 | 214 | 15 | 220 | 2.78e-42 | 143 |
| Msa0618550 | AT1G78360.1 | 39.908 | 218 | 126 | 5 | 5 | 220 | 4 | 218 | 8.30e-42 | 141 |
| Msa0618550 | AT1G78320.1 | 38.426 | 216 | 127 | 4 | 4 | 216 | 3 | 215 | 1.02e-41 | 141 |
| Msa0618550 | AT3G43800.1 | 41.627 | 209 | 115 | 4 | 1 | 204 | 1 | 207 | 1.94e-41 | 141 |
| Msa0618550 | AT1G27130.1 | 37.500 | 224 | 131 | 6 | 2 | 217 | 3 | 225 | 2.12e-40 | 138 |
| Msa0618550 | AT5G62480.1 | 37.037 | 216 | 125 | 4 | 14 | 220 | 17 | 230 | 3.85e-40 | 138 |
| Msa0618550 | AT1G10360.1 | 38.725 | 204 | 118 | 3 | 1 | 197 | 1 | 204 | 2.84e-39 | 135 |
| Msa0618550 | AT1G69920.1 | 37.668 | 223 | 126 | 7 | 3 | 215 | 32 | 251 | 1.41e-38 | 134 |
| Msa0618550 | AT1G27140.1 | 35.841 | 226 | 135 | 5 | 2 | 218 | 3 | 227 | 8.01e-38 | 132 |
| Msa0618550 | AT1G69930.1 | 33.784 | 222 | 140 | 4 | 2 | 217 | 9 | 229 | 1.04e-37 | 131 |
| Msa0618550 | AT1G78320.2 | 32.558 | 215 | 114 | 4 | 4 | 216 | 3 | 188 | 6.59e-29 | 107 |
| Msa0618550 | AT5G62480.2 | 29.767 | 215 | 116 | 4 | 14 | 220 | 17 | 204 | 1.98e-25 | 99.4 |
| Msa0618550 | AT5G62480.3 | 29.767 | 215 | 115 | 4 | 14 | 220 | 17 | 203 | 3.65e-25 | 98.6 |
Find 65 sgRNAs with CRISPR-Local
Find 190 sgRNAs with CRISPR-GE
CRISPR-Local
| sgRNA_sequence | on_target_score | Position | Region |
|---|---|---|---|
| CTTCCAATTTGGGAAGAAAT+TGG | 0.111299 | 4_2:+69495201 | Msa0618550:CDS |
| GTGACTCTGCAATTGATTTC+TGG | 0.157766 | 4_2:-69494072 | None:intergenic |
| TTCAACTCATCGTGGTTAAT+TGG | 0.238245 | 4_2:+69495371 | Msa0618550:exon |
| AAAGTTAGAAGAGGAGATAA+AGG | 0.273945 | 4_2:+69495110 | Msa0618550:CDS |
| GACCCAATTTCTTCCCAAAT+TGG | 0.274164 | 4_2:-69495204 | None:intergenic |
| ATAAAGGGAAAGAAATTCTT+TGG | 0.305857 | 4_2:+69495126 | Msa0618550:CDS |
| AAAGTTCCGGTTCTTGTTCA+TGG | 0.322486 | 4_2:+69494049 | Msa0618550:CDS |
| AAAGATCTCAGGCTCGCTTT+TGG | 0.326368 | 4_2:+69494161 | Msa0618550:CDS |
| CAACGTTAAATAAATTAGTT+TGG | 0.330613 | 4_2:+69495490 | Msa0618550:three_prime_UTR |
| TATAGCTTGCGCTGGGTTCA+TGG | 0.334296 | 4_2:+69495022 | Msa0618550:intron |
| AATGTCCTTCCATCTCTTCA+TGG | 0.338522 | 4_2:+69495250 | Msa0618550:CDS |
| AGTTAAGCAGCTTCACATCT+TGG | 0.361900 | 4_2:-69493898 | None:intergenic |
| ACCGGAACTTTCTTATGAAT+CGG | 0.380626 | 4_2:-69494037 | None:intergenic |
| GAAAGATGCGGCGACACTTA+TGG | 0.384795 | 4_2:+69495539 | Msa0618550:three_prime_UTR |
| TTCCAATTTGGGAAGAAATT+GGG | 0.398944 | 4_2:+69495202 | Msa0618550:CDS |
| CCCGATTCATAAGAAAGTTC+CGG | 0.414826 | 4_2:+69494036 | Msa0618550:CDS |
| TTATTGCCACCGTCGCATAA+AGG | 0.420018 | 4_2:+69495341 | Msa0618550:CDS |
| ACCTTGATCTTGCTCTTGGA+TGG | 0.423990 | 4_2:+69495166 | Msa0618550:CDS |
| TTGGAAGCCTTGTAGATGAA+TGG | 0.427376 | 4_2:+69495509 | Msa0618550:three_prime_UTR |
| TAAAGAATCATTTCATCCCT+TGG | 0.429286 | 4_2:-69495321 | None:intergenic |
| CCGGAACTTTCTTATGAATC+GGG | 0.433313 | 4_2:-69494036 | None:intergenic |
| TTCTGGCCATGAACAAGAAC+CGG | 0.434336 | 4_2:-69494055 | None:intergenic |
| TGGATTGCATTGATTAAGAA+AGG | 0.435401 | 4_2:+69495042 | Msa0618550:CDS |
| GGCTAAGTTATCTGATGAAA+AGG | 0.437582 | 4_2:+69494183 | Msa0618550:CDS |
| CATTCAACTCTACGACCAAC+TGG | 0.446242 | 4_2:-69493932 | None:intergenic |
| GGGTACCTTGATCTTGCTCT+TGG | 0.453072 | 4_2:+69495162 | Msa0618550:CDS |
| TCTTTGGAGGGGACACTATC+GGG | 0.454808 | 4_2:+69495142 | Msa0618550:CDS |
| TAAATTATTATAGCTTGCGC+TGG | 0.466026 | 4_2:+69495014 | Msa0618550:intron |
| TGATTAAGAAAGGTGATGAA+TGG | 0.474122 | 4_2:+69495052 | Msa0618550:CDS |
| AAAGGAGGCAAGAGAAATCA+TGG | 0.475218 | 4_2:+69495086 | Msa0618550:CDS |
| TTCTTTGGAGGGGACACTAT+CGG | 0.475345 | 4_2:+69495141 | Msa0618550:CDS |
| GATTAAGAAAGGTGATGAAT+GGG | 0.480475 | 4_2:+69495053 | Msa0618550:CDS |
| AAGTTAGAAGAGGAGATAAA+GGG | 0.491500 | 4_2:+69495111 | Msa0618550:CDS |
| GAAAGGTGATGAATGGGAAA+AGG | 0.495659 | 4_2:+69495059 | Msa0618550:CDS |
| TGAGATCTTTGATAAGGATC+AGG | 0.498359 | 4_2:-69494148 | None:intergenic |
| AGTTGGTCGTAGAGTTGAAT+GGG | 0.508405 | 4_2:+69493934 | Msa0618550:CDS |
| CAGTTGGTCGTAGAGTTGAA+TGG | 0.517051 | 4_2:+69493933 | Msa0618550:CDS |
| TGATCCTTATCAAAGATCTC+AGG | 0.520135 | 4_2:+69494150 | Msa0618550:CDS |
| CGAGCCTGAGATCTTTGATA+AGG | 0.520914 | 4_2:-69494154 | None:intergenic |
| AAACACTCCTTGATGATGAT+AGG | 0.524604 | 4_2:-69495294 | None:intergenic |
| ATAATTTCCATTCATCTACA+AGG | 0.525093 | 4_2:-69495516 | None:intergenic |
| AATCATGGAAAAGTTAGAAG+AGG | 0.531445 | 4_2:+69495101 | Msa0618550:CDS |
| AGGGAAAGAAATTCTTTGGA+GGG | 0.536580 | 4_2:+69495130 | Msa0618550:CDS |
| ATTGATCTTCCATGAAGAGA+TGG | 0.543546 | 4_2:-69495259 | None:intergenic |
| TGAATGGGAAAAGGCTCTAA+AGG | 0.545680 | 4_2:+69495068 | Msa0618550:CDS |
| TCCATCCAAGAGCAAGATCA+AGG | 0.557485 | 4_2:-69495167 | None:intergenic |
| TAAGGATCAGGAGGCAGCAA+TGG | 0.562517 | 4_2:-69494136 | None:intergenic |
| CAAGGAGTGTTTGCCACCAA+GGG | 0.564625 | 4_2:+69495305 | Msa0618550:CDS |
| TGAATGGGCTCTAAAACTCA+AGG | 0.568264 | 4_2:+69493949 | Msa0618550:CDS |
| TCAAGGAGTGTTTGCCACCA+AGG | 0.571195 | 4_2:+69495304 | Msa0618550:CDS |
| ACTCCTTGATGATGATAGGA+TGG | 0.572678 | 4_2:-69495290 | None:intergenic |
| TTGAATACATTGATGAAACA+TGG | 0.575829 | 4_2:+69494104 | Msa0618550:CDS |
| AAGGGAAAGAAATTCTTTGG+AGG | 0.576725 | 4_2:+69495129 | Msa0618550:CDS |
| GAGCCATCCTATCATCATCA+AGG | 0.581782 | 4_2:+69495287 | Msa0618550:CDS |
| AAATTATTATAGCTTGCGCT+GGG | 0.589664 | 4_2:+69495015 | Msa0618550:intron |
| AAGAATACTCCTTTATGCGA+CGG | 0.595491 | 4_2:-69495350 | None:intergenic |
| AATGGAAATTATGAAAGATG+CGG | 0.606272 | 4_2:+69495527 | Msa0618550:three_prime_UTR |
| GGGAAAGAAATTCTTTGGAG+GGG | 0.609810 | 4_2:+69495131 | Msa0618550:CDS |
| ATCTTCCATGAAGAGATGGA+AGG | 0.621011 | 4_2:-69495255 | None:intergenic |
| AGAATCATTTCATCCCTTGG+TGG | 0.643379 | 4_2:-69495318 | None:intergenic |
| GAATGGGCTCTAAAACTCAA+GGG | 0.646090 | 4_2:+69493950 | Msa0618550:CDS |
| GATCTTTGATAAGGATCAGG+AGG | 0.658191 | 4_2:-69494145 | None:intergenic |
| ATGGGAAAAGGCTCTAAAGG+AGG | 0.677413 | 4_2:+69495071 | Msa0618550:CDS |
| AATACTCCTTTATGCGACGG+TGG | 0.688837 | 4_2:-69495347 | None:intergenic |
| GAGTATTCTTCAACTCATCG+TGG | 0.696267 | 4_2:+69495363 | Msa0618550:CDS |
CRISPR-GE
| badsite warning | sgRNA_sequence | Strand | Position | Region | GC_content |
|---|---|---|---|---|---|
| !!! | TCAATATAAAACTATTTTAA+AGG | - | chr4_2:69494792-69494811 | None:intergenic | 10.0% |
| !!! | TCAATATAAAACTATTTTAA+AGG | - | chr4_2:69494792-69494811 | None:intergenic | 10.0% |
| !!! | AATAATTGTTTTATGAACTT+AGG | + | chr4_2:69494399-69494418 | Msa0618550:intron | 15.0% |
| !! | TAATTTACACATACAAAAAT+AGG | - | chr4_2:69495001-69495020 | None:intergenic | 15.0% |
| !!! | AATAATTGTTTTATGAACTT+AGG | + | chr4_2:69494399-69494418 | Msa0618550:intron | 15.0% |
| !! | TAATTTACACATACAAAAAT+AGG | - | chr4_2:69495001-69495020 | None:intergenic | 15.0% |
| !! | TATGTTGTTCAAATTTAACT+AGG | + | chr4_2:69494229-69494248 | Msa0618550:intron | 20.0% |
| !!! | AAAATTATGTTTCCTTTTTG+AGG | + | chr4_2:69494298-69494317 | Msa0618550:intron | 20.0% |
| !! | TATCTCTTGAATTTATTAGA+TGG | - | chr4_2:69494583-69494602 | None:intergenic | 20.0% |
| !! | CAACGTTAAATAAATTAGTT+TGG | + | chr4_2:69495490-69495509 | Msa0618550:three_prime_UTR | 20.0% |
| !! | TATGTTGTTCAAATTTAACT+AGG | + | chr4_2:69494229-69494248 | Msa0618550:intron | 20.0% |
| !!! | AAAATTATGTTTCCTTTTTG+AGG | + | chr4_2:69494298-69494317 | Msa0618550:intron | 20.0% |
| !! | TATCTCTTGAATTTATTAGA+TGG | - | chr4_2:69494583-69494602 | None:intergenic | 20.0% |
| !! | CAACGTTAAATAAATTAGTT+TGG | + | chr4_2:69495490-69495509 | Msa0618550:three_prime_UTR | 20.0% |
| ! | TTGAATACATTGATGAAACA+TGG | + | chr4_2:69494104-69494123 | Msa0618550:CDS | 25.0% |
| ! | AAATACTACGTTTCTTTCAA+AGG | + | chr4_2:69494269-69494288 | Msa0618550:intron | 25.0% |
| ! | AAAATATTCTTGCCTCAAAA+AGG | - | chr4_2:69494313-69494332 | None:intergenic | 25.0% |
| !!! | TTGAGGCAAGAATATTTTTT+TGG | + | chr4_2:69494315-69494334 | Msa0618550:intron | 25.0% |
| !!! | TTTTTTTGGTGTTAATCATC+CGG | + | chr4_2:69494329-69494348 | Msa0618550:intron | 25.0% |
| ! | ATTACTTGAGTACAATTGTT+TGG | + | chr4_2:69494454-69494473 | Msa0618550:intron | 25.0% |
| ! | ATAAAGGGAAAGAAATTCTT+TGG | + | chr4_2:69495126-69495145 | Msa0618550:CDS | 25.0% |
| ! | ATAATTTCCATTCATCTACA+AGG | - | chr4_2:69495519-69495538 | None:intergenic | 25.0% |
| ! | AATGGAAATTATGAAAGATG+CGG | + | chr4_2:69495527-69495546 | Msa0618550:three_prime_UTR | 25.0% |
| ! | TTGAATACATTGATGAAACA+TGG | + | chr4_2:69494104-69494123 | Msa0618550:CDS | 25.0% |
| ! | AAATACTACGTTTCTTTCAA+AGG | + | chr4_2:69494269-69494288 | Msa0618550:intron | 25.0% |
| ! | AAAATATTCTTGCCTCAAAA+AGG | - | chr4_2:69494313-69494332 | None:intergenic | 25.0% |
| !!! | TTGAGGCAAGAATATTTTTT+TGG | + | chr4_2:69494315-69494334 | Msa0618550:intron | 25.0% |
| !!! | TTTTTTTGGTGTTAATCATC+CGG | + | chr4_2:69494329-69494348 | Msa0618550:intron | 25.0% |
| ! | ATTACTTGAGTACAATTGTT+TGG | + | chr4_2:69494454-69494473 | Msa0618550:intron | 25.0% |
| ! | ATAAAGGGAAAGAAATTCTT+TGG | + | chr4_2:69495126-69495145 | Msa0618550:CDS | 25.0% |
| ! | ATAATTTCCATTCATCTACA+AGG | - | chr4_2:69495519-69495538 | None:intergenic | 25.0% |
| ! | AATGGAAATTATGAAAGATG+CGG | + | chr4_2:69495527-69495546 | Msa0618550:three_prime_UTR | 25.0% |
| ! | AACTTTTTATTGAGTCCAGT+TGG | + | chr4_2:69493917-69493936 | Msa0618550:CDS | 30.0% |
| ATTTAACTAGGCTTATTCTG+AGG | + | chr4_2:69494241-69494260 | Msa0618550:intron | 30.0% | |
| TGTTAATCATCCGGTTAATA+GGG | + | chr4_2:69494338-69494357 | Msa0618550:intron | 30.0% | |
| CATGATCAATATGTGTTTAG+TGG | + | chr4_2:69494426-69494445 | Msa0618550:intron | 30.0% | |
| GATGTTAATTATTCCATTCC+AGG | + | chr4_2:69494672-69494691 | Msa0618550:intron | 30.0% | |
| ! | GCCTAATATGTTGATAGAAA+CGG | + | chr4_2:69494847-69494866 | Msa0618550:intron | 30.0% |
| ACCGTTTCTATCAACATATT+AGG | - | chr4_2:69494851-69494870 | None:intergenic | 30.0% | |
| ! | TAAATTATTATAGCTTGCGC+TGG | + | chr4_2:69495014-69495033 | Msa0618550:intron | 30.0% |
| ! | AAATTATTATAGCTTGCGCT+GGG | + | chr4_2:69495015-69495034 | Msa0618550:intron | 30.0% |
| !! | TGGATTGCATTGATTAAGAA+AGG | + | chr4_2:69495042-69495061 | Msa0618550:CDS | 30.0% |
| TGATTAAGAAAGGTGATGAA+TGG | + | chr4_2:69495052-69495071 | Msa0618550:CDS | 30.0% | |
| GATTAAGAAAGGTGATGAAT+GGG | + | chr4_2:69495053-69495072 | Msa0618550:CDS | 30.0% | |
| AATCATGGAAAAGTTAGAAG+AGG | + | chr4_2:69495101-69495120 | Msa0618550:CDS | 30.0% | |
| AAAGTTAGAAGAGGAGATAA+AGG | + | chr4_2:69495110-69495129 | Msa0618550:CDS | 30.0% | |
| AAGTTAGAAGAGGAGATAAA+GGG | + | chr4_2:69495111-69495130 | Msa0618550:CDS | 30.0% | |
| !! | TCACTTGTTTTCTTCCAATT+TGG | + | chr4_2:69495190-69495209 | Msa0618550:CDS | 30.0% |
| !! | CACTTGTTTTCTTCCAATTT+GGG | + | chr4_2:69495191-69495210 | Msa0618550:CDS | 30.0% |
| TTCCAATTTGGGAAGAAATT+GGG | + | chr4_2:69495202-69495221 | Msa0618550:CDS | 30.0% | |
| !! | AGATGGAAGGACATTTTAAT+GGG | - | chr4_2:69495245-69495264 | None:intergenic | 30.0% |
| TAAAGAATCATTTCATCCCT+TGG | - | chr4_2:69495324-69495343 | None:intergenic | 30.0% | |
| ! | AACTTTTTATTGAGTCCAGT+TGG | + | chr4_2:69493917-69493936 | Msa0618550:CDS | 30.0% |
| ATTTAACTAGGCTTATTCTG+AGG | + | chr4_2:69494241-69494260 | Msa0618550:intron | 30.0% | |
| TGTTAATCATCCGGTTAATA+GGG | + | chr4_2:69494338-69494357 | Msa0618550:intron | 30.0% | |
| CATGATCAATATGTGTTTAG+TGG | + | chr4_2:69494426-69494445 | Msa0618550:intron | 30.0% | |
| GATGTTAATTATTCCATTCC+AGG | + | chr4_2:69494672-69494691 | Msa0618550:intron | 30.0% | |
| ! | GCCTAATATGTTGATAGAAA+CGG | + | chr4_2:69494847-69494866 | Msa0618550:intron | 30.0% |
| ACCGTTTCTATCAACATATT+AGG | - | chr4_2:69494851-69494870 | None:intergenic | 30.0% | |
| ! | TAAATTATTATAGCTTGCGC+TGG | + | chr4_2:69495014-69495033 | Msa0618550:intron | 30.0% |
| ! | AAATTATTATAGCTTGCGCT+GGG | + | chr4_2:69495015-69495034 | Msa0618550:intron | 30.0% |
| !! | TGGATTGCATTGATTAAGAA+AGG | + | chr4_2:69495042-69495061 | Msa0618550:CDS | 30.0% |
| TGATTAAGAAAGGTGATGAA+TGG | + | chr4_2:69495052-69495071 | Msa0618550:CDS | 30.0% | |
| GATTAAGAAAGGTGATGAAT+GGG | + | chr4_2:69495053-69495072 | Msa0618550:CDS | 30.0% | |
| AATCATGGAAAAGTTAGAAG+AGG | + | chr4_2:69495101-69495120 | Msa0618550:CDS | 30.0% | |
| AAAGTTAGAAGAGGAGATAA+AGG | + | chr4_2:69495110-69495129 | Msa0618550:CDS | 30.0% | |
| AAGTTAGAAGAGGAGATAAA+GGG | + | chr4_2:69495111-69495130 | Msa0618550:CDS | 30.0% | |
| !! | TCACTTGTTTTCTTCCAATT+TGG | + | chr4_2:69495190-69495209 | Msa0618550:CDS | 30.0% |
| !! | CACTTGTTTTCTTCCAATTT+GGG | + | chr4_2:69495191-69495210 | Msa0618550:CDS | 30.0% |
| TTCCAATTTGGGAAGAAATT+GGG | + | chr4_2:69495202-69495221 | Msa0618550:CDS | 30.0% | |
| !! | AGATGGAAGGACATTTTAAT+GGG | - | chr4_2:69495245-69495264 | None:intergenic | 30.0% |
| TAAAGAATCATTTCATCCCT+TGG | - | chr4_2:69495324-69495343 | None:intergenic | 30.0% | |
| ACCGGAACTTTCTTATGAAT+CGG | - | chr4_2:69494040-69494059 | None:intergenic | 35.0% | |
| TGAGATCTTTGATAAGGATC+AGG | - | chr4_2:69494151-69494170 | None:intergenic | 35.0% | |
| TGATCCTTATCAAAGATCTC+AGG | + | chr4_2:69494150-69494169 | Msa0618550:CDS | 35.0% | |
| GGCTAAGTTATCTGATGAAA+AGG | + | chr4_2:69494183-69494202 | Msa0618550:CDS | 35.0% | |
| GTGTTAATCATCCGGTTAAT+AGG | + | chr4_2:69494337-69494356 | Msa0618550:intron | 35.0% | |
| GTTAATCATCCGGTTAATAG+GGG | + | chr4_2:69494339-69494358 | Msa0618550:intron | 35.0% | |
| ACAATACTTGAATGTATGCC+TGG | - | chr4_2:69494693-69494712 | None:intergenic | 35.0% | |
| AAGGGAAAGAAATTCTTTGG+AGG | + | chr4_2:69495129-69495148 | Msa0618550:CDS | 35.0% | |
| AGGGAAAGAAATTCTTTGGA+GGG | + | chr4_2:69495130-69495149 | Msa0618550:CDS | 35.0% | |
| CTTCCAATTTGGGAAGAAAT+TGG | + | chr4_2:69495201-69495220 | Msa0618550:CDS | 35.0% | |
| ! | GAGATGGAAGGACATTTTAA+TGG | - | chr4_2:69495246-69495265 | None:intergenic | 35.0% |
| ATTGATCTTCCATGAAGAGA+TGG | - | chr4_2:69495262-69495281 | None:intergenic | 35.0% | |
| !! | AAACACTCCTTGATGATGAT+AGG | - | chr4_2:69495297-69495316 | None:intergenic | 35.0% |
| AAGAATACTCCTTTATGCGA+CGG | - | chr4_2:69495353-69495372 | None:intergenic | 35.0% | |
| TTCAACTCATCGTGGTTAAT+TGG | + | chr4_2:69495371-69495390 | Msa0618550:exon | 35.0% | |
| ACCGGAACTTTCTTATGAAT+CGG | - | chr4_2:69494040-69494059 | None:intergenic | 35.0% | |
| TGAGATCTTTGATAAGGATC+AGG | - | chr4_2:69494151-69494170 | None:intergenic | 35.0% | |
| TGATCCTTATCAAAGATCTC+AGG | + | chr4_2:69494150-69494169 | Msa0618550:CDS | 35.0% | |
| GGCTAAGTTATCTGATGAAA+AGG | + | chr4_2:69494183-69494202 | Msa0618550:CDS | 35.0% | |
| GTGTTAATCATCCGGTTAAT+AGG | + | chr4_2:69494337-69494356 | Msa0618550:intron | 35.0% | |
| GTTAATCATCCGGTTAATAG+GGG | + | chr4_2:69494339-69494358 | Msa0618550:intron | 35.0% | |
| ACAATACTTGAATGTATGCC+TGG | - | chr4_2:69494693-69494712 | None:intergenic | 35.0% | |
| AAGGGAAAGAAATTCTTTGG+AGG | + | chr4_2:69495129-69495148 | Msa0618550:CDS | 35.0% | |
| AGGGAAAGAAATTCTTTGGA+GGG | + | chr4_2:69495130-69495149 | Msa0618550:CDS | 35.0% | |
| CTTCCAATTTGGGAAGAAAT+TGG | + | chr4_2:69495201-69495220 | Msa0618550:CDS | 35.0% | |
| ! | GAGATGGAAGGACATTTTAA+TGG | - | chr4_2:69495246-69495265 | None:intergenic | 35.0% |
| ATTGATCTTCCATGAAGAGA+TGG | - | chr4_2:69495262-69495281 | None:intergenic | 35.0% | |
| !! | AAACACTCCTTGATGATGAT+AGG | - | chr4_2:69495297-69495316 | None:intergenic | 35.0% |
| AAGAATACTCCTTTATGCGA+CGG | - | chr4_2:69495353-69495372 | None:intergenic | 35.0% | |
| TTCAACTCATCGTGGTTAAT+TGG | + | chr4_2:69495371-69495390 | Msa0618550:exon | 35.0% | |
| AGTTAAGCAGCTTCACATCT+TGG | - | chr4_2:69493901-69493920 | None:intergenic | 40.0% | |
| AGTTGGTCGTAGAGTTGAAT+GGG | + | chr4_2:69493934-69493953 | Msa0618550:CDS | 40.0% | |
| !! | TGAATGGGCTCTAAAACTCA+AGG | + | chr4_2:69493949-69493968 | Msa0618550:CDS | 40.0% |
| !! | GAATGGGCTCTAAAACTCAA+GGG | + | chr4_2:69493950-69493969 | Msa0618550:CDS | 40.0% |
| CCGGAACTTTCTTATGAATC+GGG | - | chr4_2:69494039-69494058 | None:intergenic | 40.0% | |
| CCCGATTCATAAGAAAGTTC+CGG | + | chr4_2:69494036-69494055 | Msa0618550:CDS | 40.0% | |
| AAAGTTCCGGTTCTTGTTCA+TGG | + | chr4_2:69494049-69494068 | Msa0618550:CDS | 40.0% | |
| ! | GTGACTCTGCAATTGATTTC+TGG | - | chr4_2:69494075-69494094 | None:intergenic | 40.0% |
| GATCTTTGATAAGGATCAGG+AGG | - | chr4_2:69494148-69494167 | None:intergenic | 40.0% | |
| ACTTGAATGTATGCCTGGAA+TGG | - | chr4_2:69494688-69494707 | None:intergenic | 40.0% | |
| GAAAGGTGATGAATGGGAAA+AGG | + | chr4_2:69495059-69495078 | Msa0618550:CDS | 40.0% | |
| ! | TGAATGGGAAAAGGCTCTAA+AGG | + | chr4_2:69495068-69495087 | Msa0618550:CDS | 40.0% |
| AAAGGAGGCAAGAGAAATCA+TGG | + | chr4_2:69495086-69495105 | Msa0618550:CDS | 40.0% | |
| ! | GGGAAAGAAATTCTTTGGAG+GGG | + | chr4_2:69495131-69495150 | Msa0618550:CDS | 40.0% |
| GACCCAATTTCTTCCCAAAT+TGG | - | chr4_2:69495207-69495226 | None:intergenic | 40.0% | |
| AATGTCCTTCCATCTCTTCA+TGG | + | chr4_2:69495250-69495269 | Msa0618550:CDS | 40.0% | |
| ATCTTCCATGAAGAGATGGA+AGG | - | chr4_2:69495258-69495277 | None:intergenic | 40.0% | |
| !! | ACTCCTTGATGATGATAGGA+TGG | - | chr4_2:69495293-69495312 | None:intergenic | 40.0% |
| AGAATCATTTCATCCCTTGG+TGG | - | chr4_2:69495321-69495340 | None:intergenic | 40.0% | |
| GAGTATTCTTCAACTCATCG+TGG | + | chr4_2:69495363-69495382 | Msa0618550:CDS | 40.0% | |
| ! | TTGGAAGCCTTGTAGATGAA+TGG | + | chr4_2:69495509-69495528 | Msa0618550:three_prime_UTR | 40.0% |
| AGTTAAGCAGCTTCACATCT+TGG | - | chr4_2:69493901-69493920 | None:intergenic | 40.0% | |
| AGTTGGTCGTAGAGTTGAAT+GGG | + | chr4_2:69493934-69493953 | Msa0618550:CDS | 40.0% | |
| !! | TGAATGGGCTCTAAAACTCA+AGG | + | chr4_2:69493949-69493968 | Msa0618550:CDS | 40.0% |
| !! | GAATGGGCTCTAAAACTCAA+GGG | + | chr4_2:69493950-69493969 | Msa0618550:CDS | 40.0% |
| CCGGAACTTTCTTATGAATC+GGG | - | chr4_2:69494039-69494058 | None:intergenic | 40.0% | |
| CCCGATTCATAAGAAAGTTC+CGG | + | chr4_2:69494036-69494055 | Msa0618550:CDS | 40.0% | |
| AAAGTTCCGGTTCTTGTTCA+TGG | + | chr4_2:69494049-69494068 | Msa0618550:CDS | 40.0% | |
| ! | GTGACTCTGCAATTGATTTC+TGG | - | chr4_2:69494075-69494094 | None:intergenic | 40.0% |
| GATCTTTGATAAGGATCAGG+AGG | - | chr4_2:69494148-69494167 | None:intergenic | 40.0% | |
| ACTTGAATGTATGCCTGGAA+TGG | - | chr4_2:69494688-69494707 | None:intergenic | 40.0% | |
| GAAAGGTGATGAATGGGAAA+AGG | + | chr4_2:69495059-69495078 | Msa0618550:CDS | 40.0% | |
| ! | TGAATGGGAAAAGGCTCTAA+AGG | + | chr4_2:69495068-69495087 | Msa0618550:CDS | 40.0% |
| AAAGGAGGCAAGAGAAATCA+TGG | + | chr4_2:69495086-69495105 | Msa0618550:CDS | 40.0% | |
| ! | GGGAAAGAAATTCTTTGGAG+GGG | + | chr4_2:69495131-69495150 | Msa0618550:CDS | 40.0% |
| GACCCAATTTCTTCCCAAAT+TGG | - | chr4_2:69495207-69495226 | None:intergenic | 40.0% | |
| AATGTCCTTCCATCTCTTCA+TGG | + | chr4_2:69495250-69495269 | Msa0618550:CDS | 40.0% | |
| ATCTTCCATGAAGAGATGGA+AGG | - | chr4_2:69495258-69495277 | None:intergenic | 40.0% | |
| !! | ACTCCTTGATGATGATAGGA+TGG | - | chr4_2:69495293-69495312 | None:intergenic | 40.0% |
| AGAATCATTTCATCCCTTGG+TGG | - | chr4_2:69495321-69495340 | None:intergenic | 40.0% | |
| GAGTATTCTTCAACTCATCG+TGG | + | chr4_2:69495363-69495382 | Msa0618550:CDS | 40.0% | |
| ! | TTGGAAGCCTTGTAGATGAA+TGG | + | chr4_2:69495509-69495528 | Msa0618550:three_prime_UTR | 40.0% |
| CATTCAACTCTACGACCAAC+TGG | - | chr4_2:69493935-69493954 | None:intergenic | 45.0% | |
| CAGTTGGTCGTAGAGTTGAA+TGG | + | chr4_2:69493933-69493952 | Msa0618550:CDS | 45.0% | |
| TTCTGGCCATGAACAAGAAC+CGG | - | chr4_2:69494058-69494077 | None:intergenic | 45.0% | |
| CGAGCCTGAGATCTTTGATA+AGG | - | chr4_2:69494157-69494176 | None:intergenic | 45.0% | |
| ! | AAAGATCTCAGGCTCGCTTT+TGG | + | chr4_2:69494161-69494180 | Msa0618550:CDS | 45.0% |
| !! | AAGATCTCAGGCTCGCTTTT+GGG | + | chr4_2:69494162-69494181 | Msa0618550:CDS | 45.0% |
| ATCATCCGGTTAATAGGGGA+AGG | + | chr4_2:69494343-69494362 | Msa0618550:intron | 45.0% | |
| ACTCTCCTTCCCCTATTAAC+CGG | - | chr4_2:69494351-69494370 | None:intergenic | 45.0% | |
| !! | ATGGGAAAAGGCTCTAAAGG+AGG | + | chr4_2:69495071-69495090 | Msa0618550:CDS | 45.0% |
| ! | TTCTTTGGAGGGGACACTAT+CGG | + | chr4_2:69495141-69495160 | Msa0618550:CDS | 45.0% |
| ACCTTGATCTTGCTCTTGGA+TGG | + | chr4_2:69495166-69495185 | Msa0618550:CDS | 45.0% | |
| TCCATCCAAGAGCAAGATCA+AGG | - | chr4_2:69495170-69495189 | None:intergenic | 45.0% | |
| GAGCCATCCTATCATCATCA+AGG | + | chr4_2:69495287-69495306 | Msa0618550:CDS | 45.0% | |
| TTATTGCCACCGTCGCATAA+AGG | + | chr4_2:69495341-69495360 | Msa0618550:CDS | 45.0% | |
| AATACTCCTTTATGCGACGG+TGG | - | chr4_2:69495350-69495369 | None:intergenic | 45.0% | |
| CATTCAACTCTACGACCAAC+TGG | - | chr4_2:69493935-69493954 | None:intergenic | 45.0% | |
| CAGTTGGTCGTAGAGTTGAA+TGG | + | chr4_2:69493933-69493952 | Msa0618550:CDS | 45.0% | |
| TTCTGGCCATGAACAAGAAC+CGG | - | chr4_2:69494058-69494077 | None:intergenic | 45.0% | |
| CGAGCCTGAGATCTTTGATA+AGG | - | chr4_2:69494157-69494176 | None:intergenic | 45.0% | |
| ! | AAAGATCTCAGGCTCGCTTT+TGG | + | chr4_2:69494161-69494180 | Msa0618550:CDS | 45.0% |
| !! | AAGATCTCAGGCTCGCTTTT+GGG | + | chr4_2:69494162-69494181 | Msa0618550:CDS | 45.0% |
| ATCATCCGGTTAATAGGGGA+AGG | + | chr4_2:69494343-69494362 | Msa0618550:intron | 45.0% | |
| ACTCTCCTTCCCCTATTAAC+CGG | - | chr4_2:69494351-69494370 | None:intergenic | 45.0% | |
| !! | ATGGGAAAAGGCTCTAAAGG+AGG | + | chr4_2:69495071-69495090 | Msa0618550:CDS | 45.0% |
| ! | TTCTTTGGAGGGGACACTAT+CGG | + | chr4_2:69495141-69495160 | Msa0618550:CDS | 45.0% |
| ACCTTGATCTTGCTCTTGGA+TGG | + | chr4_2:69495166-69495185 | Msa0618550:CDS | 45.0% | |
| TCCATCCAAGAGCAAGATCA+AGG | - | chr4_2:69495170-69495189 | None:intergenic | 45.0% | |
| GAGCCATCCTATCATCATCA+AGG | + | chr4_2:69495287-69495306 | Msa0618550:CDS | 45.0% | |
| TTATTGCCACCGTCGCATAA+AGG | + | chr4_2:69495341-69495360 | Msa0618550:CDS | 45.0% | |
| AATACTCCTTTATGCGACGG+TGG | - | chr4_2:69495350-69495369 | None:intergenic | 45.0% | |
| TAAGGATCAGGAGGCAGCAA+TGG | - | chr4_2:69494139-69494158 | None:intergenic | 50.0% | |
| GGAAGGAGAGTTCTCTCGAA+AGG | + | chr4_2:69494360-69494379 | Msa0618550:intron | 50.0% | |
| ! | TATAGCTTGCGCTGGGTTCA+TGG | + | chr4_2:69495022-69495041 | Msa0618550:intron | 50.0% |
| ! | TCTTTGGAGGGGACACTATC+GGG | + | chr4_2:69495142-69495161 | Msa0618550:CDS | 50.0% |
| GGGTACCTTGATCTTGCTCT+TGG | + | chr4_2:69495162-69495181 | Msa0618550:CDS | 50.0% | |
| !! | TCAAGGAGTGTTTGCCACCA+AGG | + | chr4_2:69495304-69495323 | Msa0618550:CDS | 50.0% |
| !! | CAAGGAGTGTTTGCCACCAA+GGG | + | chr4_2:69495305-69495324 | Msa0618550:CDS | 50.0% |
| GAAAGATGCGGCGACACTTA+TGG | + | chr4_2:69495539-69495558 | Msa0618550:three_prime_UTR | 50.0% | |
| TAAGGATCAGGAGGCAGCAA+TGG | - | chr4_2:69494139-69494158 | None:intergenic | 50.0% | |
| GGAAGGAGAGTTCTCTCGAA+AGG | + | chr4_2:69494360-69494379 | Msa0618550:intron | 50.0% | |
| ! | TATAGCTTGCGCTGGGTTCA+TGG | + | chr4_2:69495022-69495041 | Msa0618550:intron | 50.0% |
| ! | TCTTTGGAGGGGACACTATC+GGG | + | chr4_2:69495142-69495161 | Msa0618550:CDS | 50.0% |
| GGGTACCTTGATCTTGCTCT+TGG | + | chr4_2:69495162-69495181 | Msa0618550:CDS | 50.0% | |
| !! | TCAAGGAGTGTTTGCCACCA+AGG | + | chr4_2:69495304-69495323 | Msa0618550:CDS | 50.0% |
| !! | CAAGGAGTGTTTGCCACCAA+GGG | + | chr4_2:69495305-69495324 | Msa0618550:CDS | 50.0% |
| GAAAGATGCGGCGACACTTA+TGG | + | chr4_2:69495539-69495558 | Msa0618550:three_prime_UTR | 50.0% |
| Chromosome | Type | Strat | End | Strand | Name |
|---|---|---|---|---|---|
| chr4_2 | gene | 69493864 | 69495577 | 69493864 | ID=Msa0618550;Name=Msa0618550 |
| chr4_2 | mRNA | 69493864 | 69495577 | 69493864 | ID=Msa0618550-mRNA-1;Parent=Msa0618550;Name=Msa0618550-mRNA-1;_AED=0.02;_eAED=0.02;_QI=26|1|1|1|1|1|2|188|225 |
| chr4_2 | exon | 69493864 | 69494204 | 69493864 | ID=Msa0618550-mRNA-1:exon:20091;Parent=Msa0618550-mRNA-1 |
| chr4_2 | exon | 69495027 | 69495577 | 69495027 | ID=Msa0618550-mRNA-1:exon:20092;Parent=Msa0618550-mRNA-1 |
| chr4_2 | five_prime_UTR | 69493864 | 69493889 | 69493864 | ID=Msa0618550-mRNA-1:five_prime_utr;Parent=Msa0618550-mRNA-1 |
| chr4_2 | CDS | 69493890 | 69494204 | 69493890 | ID=Msa0618550-mRNA-1:cds;Parent=Msa0618550-mRNA-1 |
| chr4_2 | CDS | 69495027 | 69495389 | 69495027 | ID=Msa0618550-mRNA-1:cds;Parent=Msa0618550-mRNA-1 |
| chr4_2 | three_prime_UTR | 69495390 | 69495577 | 69495390 | ID=Msa0618550-mRNA-1:three_prime_utr;Parent=Msa0618550-mRNA-1 |
| Gene Sequence |
| Protein sequence |
