Alfalfa Gene Editing Database
Alfalfa Gene Editing Database
| Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa0077370 | QCE07629.1 | 84.286 | 70 | 11 | 0 | 1 | 70 | 1 | 70 | 1.99e-33 | 119 |
| Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa0077370 | sp|P82381|ICI_LINUS | 55.882 | 68 | 30 | 0 | 2 | 69 | 1 | 68 | 7.34e-21 | 80.5 |
| Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa0077370 | A0A4D6N565 | 84.286 | 70 | 11 | 0 | 1 | 70 | 1 | 70 | 9.51e-34 | 119 |
| Gene ID | Type | Classification |
|---|
| Gene ID | Type | Classification |
|---|
Co-expression Network
| Gene1 | Gene2 | correlation coefficient | p_value | FDR |
|---|---|---|---|---|
| Msa0001830 | Msa0077370 | 0.848374 | 6.382633e-60 | -8.615850e-47 |
| Msa0004480 | Msa0077370 | 0.818097 | 2.341523e-52 | -8.615850e-47 |
| Msa0033840 | Msa0077370 | -0.806965 | 6.365273e-50 | -8.615850e-47 |
| Msa0043850 | Msa0077370 | 0.847471 | 1.132666e-59 | -8.615850e-47 |
| Msa0051960 | Msa0077370 | 0.817664 | 2.933140e-52 | -8.615850e-47 |
| Msa0052360 | Msa0077370 | 0.804438 | 2.160307e-49 | -8.615850e-47 |
| Msa0052780 | Msa0077370 | 0.858298 | 9.068808e-63 | -8.615850e-47 |
| Msa0061220 | Msa0077370 | 0.846173 | 2.565470e-59 | -8.615850e-47 |
| Msa0067590 | Msa0077370 | -0.852897 | 3.413502e-61 | -8.615850e-47 |
| Msa0072600 | Msa0077370 | -0.818457 | 1.940700e-52 | -8.615850e-47 |
| Msa0077370 | Msa0077380 | 0.864719 | 9.931874e-65 | -8.615850e-47 |
| Msa0077370 | Msa0081610 | -0.802261 | 6.100303e-49 | -8.615850e-47 |
| Msa0077370 | Msa0082230 | 0.869168 | 3.789213e-66 | -8.615850e-47 |
| Msa0077370 | Msa0082420 | 0.880282 | 6.241359e-70 | -8.615850e-47 |
| Msa0077370 | Msa0086190 | 0.864389 | 1.259973e-64 | -8.615850e-47 |
| Msa0077370 | Msa0090510 | 0.850244 | 1.925332e-60 | -8.615850e-47 |
| Msa0077370 | Msa0094710 | 0.805852 | 1.093001e-49 | -8.615850e-47 |
| Msa0077370 | Msa0095940 | 0.801422 | 9.073505e-49 | -8.615850e-47 |
| Msa0077370 | Msa0097370 | 0.803701 | 3.074739e-49 | -8.615850e-47 |
| Msa0077370 | Msa0097570 | 0.868664 | 5.519819e-66 | -8.615850e-47 |
| Msa0077370 | Msa0100750 | 0.832328 | 1.006731e-55 | -8.615850e-47 |
| Msa0077370 | Msa0101960 | 0.825055 | 5.774978e-54 | -8.615850e-47 |
| Msa0077370 | Msa0108760 | 0.813813 | 2.116620e-51 | -8.615850e-47 |
| Msa0077370 | Msa0112880 | -0.814977 | 1.170151e-51 | -8.615850e-47 |
| Msa0077370 | Msa0113370 | -0.834216 | 3.407238e-56 | -8.615850e-47 |
| Msa0077370 | Msa0117520 | 0.812006 | 5.266987e-51 | -8.615850e-47 |
| Msa0077370 | Msa0125320 | 0.856918 | 2.324346e-62 | -8.615850e-47 |
| Msa0077370 | Msa0127870 | 0.800108 | 1.681901e-48 | -8.615850e-47 |
| Msa0077370 | Msa0132430 | 0.811314 | 7.447770e-51 | -8.615850e-47 |
| Msa0077370 | Msa0137980 | 0.841770 | 3.885302e-58 | -8.615850e-47 |
| Msa0077370 | Msa0138900 | 0.814408 | 1.564647e-51 | -8.615850e-47 |
| Msa0077370 | Msa0145430 | 0.820272 | 7.486530e-53 | -8.615850e-47 |
| Msa0077370 | Msa0174010 | 0.801173 | 1.020117e-48 | -8.615850e-47 |
| Msa0077370 | Msa0174100 | 0.855318 | 6.837730e-62 | -8.615850e-47 |
| Msa0077370 | Msa0174820 | 0.834220 | 3.400435e-56 | -8.615850e-47 |
| Msa0077370 | Msa0182020 | 0.820901 | 5.368546e-53 | -8.615850e-47 |
| Msa0077370 | Msa0183910 | 0.838955 | 2.114056e-57 | -8.615850e-47 |
| Msa0077370 | Msa0203090 | 0.808485 | 3.026415e-50 | -8.615850e-47 |
| Msa0077370 | Msa0213540 | 0.821169 | 4.658232e-53 | -8.615850e-47 |
| Msa0077370 | Msa0236920 | 0.803828 | 2.893331e-49 | -8.615850e-47 |
| Msa0077370 | Msa0241480 | 0.812956 | 3.266053e-51 | -8.615850e-47 |
| Msa0077370 | Msa0256140 | 0.803670 | 3.120615e-49 | -8.615850e-47 |
| Msa0077370 | Msa0259680 | 0.821314 | 4.313109e-53 | -8.615850e-47 |
| Msa0077370 | Msa0276430 | 0.818566 | 1.833157e-52 | -8.615850e-47 |
| Msa0077370 | Msa0281050 | 0.801998 | 6.909434e-49 | -8.615850e-47 |
| Msa0077370 | Msa0302730 | 0.802761 | 4.813371e-49 | -8.615850e-47 |
| Msa0077370 | Msa0304730 | 0.822899 | 1.850821e-53 | -8.615850e-47 |
| Msa0077370 | Msa0310720 | -0.825085 | 5.680995e-54 | -8.615850e-47 |
| Msa0077370 | Msa0310730 | -0.838005 | 3.718360e-57 | -8.615850e-47 |
| Msa0077370 | Msa0316470 | 0.818694 | 1.714752e-52 | -8.615850e-47 |
| Msa0077370 | Msa0319020 | 0.812615 | 3.877310e-51 | -8.615850e-47 |
| Msa0077370 | Msa0320230 | 0.808199 | 3.482356e-50 | -8.615850e-47 |
| Msa0077370 | Msa0331020 | 0.824174 | 9.312266e-54 | -8.615850e-47 |
| Msa0077370 | Msa0341480 | 0.832883 | 7.330091e-56 | -8.615850e-47 |
| Msa0077370 | Msa0366780 | 0.808383 | 3.182396e-50 | -8.615850e-47 |
| Msa0077370 | Msa0367540 | -0.849216 | 3.728444e-60 | -8.615850e-47 |
| Msa0077370 | Msa0370580 | -0.849308 | 3.514079e-60 | -8.615850e-47 |
| Msa0077370 | Msa0374340 | -0.803056 | 4.182004e-49 | -8.615850e-47 |
| Msa0077370 | Msa0383870 | -0.832754 | 7.891749e-56 | -8.615850e-47 |
| Msa0077370 | Msa0385740 | 0.808485 | 3.026109e-50 | -8.615850e-47 |
| Msa0077370 | Msa0388730 | 0.808734 | 2.676936e-50 | -8.615850e-47 |
| Msa0077370 | Msa0390550 | 0.802095 | 6.600747e-49 | -8.615850e-47 |
| Msa0077370 | Msa0403470 | -0.813984 | 1.940821e-51 | -8.615850e-47 |
| Msa0077370 | Msa0414730 | 0.805549 | 1.265506e-49 | -8.615850e-47 |
| Msa0077370 | Msa0415160 | -0.814012 | 1.913573e-51 | -8.615850e-47 |
| Msa0077370 | Msa0427310 | 0.847914 | 8.551395e-60 | -8.615850e-47 |
| Msa0077370 | Msa0428200 | 0.803131 | 4.035423e-49 | -8.615850e-47 |
| Msa0077370 | Msa0431900 | 0.838581 | 2.642150e-57 | -8.615850e-47 |
| Msa0077370 | Msa0455680 | 0.808094 | 3.666481e-50 | -8.615850e-47 |
| Msa0077370 | Msa0473810 | 0.822292 | 2.560894e-53 | -8.615850e-47 |
| Msa0077370 | Msa0490320 | 0.810012 | 1.424448e-50 | -8.615850e-47 |
| Msa0077370 | Msa0507060 | 0.808963 | 2.392563e-50 | -8.615850e-47 |
| Msa0077370 | Msa0517990 | 0.851536 | 8.324032e-61 | -8.615850e-47 |
| Msa0077370 | Msa0520770 | 0.831775 | 1.378572e-55 | -8.615850e-47 |
| Msa0077370 | Msa0525770 | 0.807539 | 4.812266e-50 | -8.615850e-47 |
| Msa0077370 | Msa0528990 | 0.919853 | 2.674888e-87 | -8.615850e-47 |
| Msa0077370 | Msa0529000 | 0.989953 | 2.176827e-180 | -8.615850e-47 |
| Msa0077370 | Msa0530730 | 0.839903 | 1.199608e-57 | -8.615850e-47 |
| Msa0077370 | Msa0534610 | 0.812192 | 4.797329e-51 | -8.615850e-47 |
| Msa0077370 | Msa0536350 | 0.809685 | 1.674821e-50 | -8.615850e-47 |
| Msa0077370 | Msa0545050 | 0.839689 | 1.363885e-57 | -8.615850e-47 |
| Msa0077370 | Msa0548650 | -0.814489 | 1.501272e-51 | -8.615850e-47 |
| Msa0077370 | Msa0561360 | 0.832552 | 8.858436e-56 | -8.615850e-47 |
| Msa0077370 | Msa0567370 | 0.844960 | 5.467641e-59 | -8.615850e-47 |
| Msa0077370 | Msa0567480 | 0.804295 | 2.313083e-49 | -8.615850e-47 |
| Msa0077370 | Msa0570700 | 0.850075 | 2.146175e-60 | -8.615850e-47 |
| Msa0077370 | Msa0574930 | 0.901235 | 3.288657e-78 | -8.615850e-47 |
| Msa0077370 | Msa0576120 | -0.812094 | 5.038533e-51 | -8.615850e-47 |
| Msa0077370 | Msa0576560 | 0.806860 | 6.699286e-50 | -8.615850e-47 |
| Msa0077370 | Msa0578410 | 0.834983 | 2.186347e-56 | -8.615850e-47 |
| Msa0077370 | Msa0584580 | 0.804513 | 2.084058e-49 | -8.615850e-47 |
| Msa0077370 | Msa0584600 | 0.808477 | 3.038811e-50 | -8.615850e-47 |
| Msa0077370 | Msa0587120 | 0.817138 | 3.853037e-52 | -8.615850e-47 |
| Msa0077370 | Msa0588590 | 0.840247 | 9.753152e-58 | -8.615850e-47 |
| Msa0077370 | Msa0588620 | 0.816091 | 6.611900e-52 | -8.615850e-47 |
| Msa0077370 | Msa0590810 | 0.811616 | 6.403986e-51 | -8.615850e-47 |
| Msa0077370 | Msa0592330 | 0.825969 | 3.507712e-54 | -8.615850e-47 |
| Msa0077370 | Msa0600590 | 0.847034 | 1.492319e-59 | -8.615850e-47 |
| Msa0077370 | Msa0606080 | 0.811496 | 6.800386e-51 | -8.615850e-47 |
| Msa0077370 | Msa0609420 | 0.818298 | 2.108403e-52 | -8.615850e-47 |
| Msa0077370 | Msa0610830 | 0.846026 | 2.813097e-59 | -8.615850e-47 |
| Msa0077370 | Msa0611060 | 0.849470 | 3.167998e-60 | -8.615850e-47 |
| Msa0077370 | Msa0613420 | 0.818199 | 2.220486e-52 | -8.615850e-47 |
| Msa0077370 | Msa0626920 | 0.832395 | 9.688135e-56 | -8.615850e-47 |
| Msa0077370 | Msa0631130 | 0.809944 | 1.473233e-50 | -8.615850e-47 |
| Msa0077370 | Msa0632420 | 0.805732 | 1.158188e-49 | -8.615850e-47 |
| Msa0077370 | Msa0637930 | -0.834737 | 2.520796e-56 | -8.615850e-47 |
| Msa0077370 | Msa0638010 | -0.801901 | 7.236307e-49 | -8.615850e-47 |
| Msa0077370 | Msa0641130 | 0.843084 | 1.741332e-58 | -8.615850e-47 |
| Msa0077370 | Msa0650060 | 0.806279 | 8.884538e-50 | -8.615850e-47 |
| Msa0077370 | Msa0654900 | 0.843938 | 1.030045e-58 | -8.615850e-47 |
| Msa0077370 | Msa0671170 | 0.806959 | 6.385528e-50 | -8.615850e-47 |
| Msa0077370 | Msa0671210 | 0.812258 | 4.642011e-51 | -8.615850e-47 |
| Msa0077370 | Msa0679670 | 0.811459 | 6.927928e-51 | -8.615850e-47 |
| Msa0077370 | Msa0693520 | 0.808378 | 3.189925e-50 | -8.615850e-47 |
| Msa0077370 | Msa0693750 | 0.818991 | 1.468251e-52 | -8.615850e-47 |
| Msa0077370 | Msa0694140 | 0.829535 | 4.876783e-55 | -8.615850e-47 |
| Msa0077370 | Msa0697680 | 0.801845 | 7.429396e-49 | -8.615850e-47 |
| Msa0077370 | Msa0698450 | 0.861045 | 1.351990e-63 | -8.615850e-47 |
| Msa0077370 | Msa0698460 | 0.862110 | 6.388738e-64 | -8.615850e-47 |
| Msa0077370 | Msa0703810 | 0.841073 | 5.925986e-58 | -8.615850e-47 |
| Msa0077370 | Msa0708600 | 0.872066 | 4.230637e-67 | -8.615850e-47 |
| Msa0077370 | Msa0713060 | 0.830052 | 3.647786e-55 | -8.615850e-47 |
| Msa0077370 | Msa0744640 | 0.891650 | 3.273952e-74 | -8.615850e-47 |
| Msa0077370 | Msa0772280 | 0.813776 | 2.156611e-51 | -8.615850e-47 |
| Msa0077370 | Msa0776560 | 0.803853 | 2.858516e-49 | -8.615850e-47 |
| Msa0077370 | Msa0779230 | 0.808344 | 3.244064e-50 | -8.615850e-47 |
| Msa0077370 | Msa0787220 | 0.800476 | 1.415732e-48 | -8.615850e-47 |
| Msa0077370 | Msa0787790 | 0.803166 | 3.968490e-49 | -8.615850e-47 |
| Msa0077370 | Msa0791390 | 0.800806 | 1.212501e-48 | -8.615850e-47 |
| Msa0077370 | Msa0802740 | 0.810834 | 9.464672e-51 | -8.615850e-47 |
| Msa0077370 | Msa0810440 | 0.814293 | 1.658545e-51 | -8.615850e-47 |
| Msa0077370 | Msa0816630 | 0.811656 | 6.276339e-51 | -8.615850e-47 |
| Msa0077370 | Msa0833270 | 0.814101 | 1.829092e-51 | -8.615850e-47 |
| Msa0077370 | Msa0833950 | -0.803523 | 3.347271e-49 | -8.615850e-47 |
| Msa0077370 | Msa0841730 | 0.892038 | 2.294040e-74 | -8.615850e-47 |
| Msa0077370 | Msa0863990 | 0.833146 | 6.306299e-56 | -8.615850e-47 |
| Msa0077370 | Msa0870510 | 0.827914 | 1.202501e-54 | -8.615850e-47 |
| Msa0077370 | Msa0875080 | 0.836116 | 1.129638e-56 | -8.615850e-47 |
| Msa0077370 | Msa0881530 | -0.852675 | 3.952059e-61 | -8.615850e-47 |
| Msa0077370 | Msa0907430 | 0.828238 | 1.004412e-54 | -8.615850e-47 |
| Msa0077370 | Msa0930740 | 0.862528 | 4.754941e-64 | -8.615850e-47 |
| Msa0077370 | Msa0940340 | 0.847581 | 1.056105e-59 | -8.615850e-47 |
| Msa0077370 | Msa0946110 | 0.811257 | 7.662032e-51 | -8.615850e-47 |
| Msa0077370 | Msa0969380 | 0.814371 | 1.593684e-51 | -8.615850e-47 |
| Msa0077370 | Msa0969720 | 0.815745 | 7.897873e-52 | -8.615850e-47 |
| Msa0077370 | Msa0982090 | -0.865779 | 4.609702e-65 | -8.615850e-47 |
| Msa0077370 | Msa0984290 | 0.824281 | 8.787275e-54 | -8.615850e-47 |
| Msa0077370 | Msa1011250 | 0.810892 | 9.194019e-51 | -8.615850e-47 |
| Msa0077370 | Msa1016960 | 0.869744 | 2.461381e-66 | -8.615850e-47 |
| Msa0077370 | Msa1022030 | 0.827567 | 1.457086e-54 | -8.615850e-47 |
| Msa0077370 | Msa1031460 | 0.862424 | 5.119780e-64 | -8.615850e-47 |
| Msa0077370 | Msa1044510 | 0.844157 | 8.995837e-59 | -8.615850e-47 |
| Msa0077370 | Msa1058200 | 0.860255 | 2.346314e-63 | -8.615850e-47 |
| Msa0077370 | Msa1062040 | 0.851909 | 6.528719e-61 | -8.615850e-47 |
| Msa0077370 | Msa1062080 | 0.810143 | 1.334438e-50 | -8.615850e-47 |
| Msa0077370 | Msa1063360 | 0.811435 | 7.011672e-51 | -8.615850e-47 |
| Msa0077370 | Msa1068380 | 0.812688 | 3.738155e-51 | -8.615850e-47 |
| Msa0077370 | Msa1069340 | 0.824043 | 9.993530e-54 | -8.615850e-47 |
| Msa0077370 | Msa1070540 | 0.877657 | 5.270114e-69 | -8.615850e-47 |
| Msa0077370 | Msa1082360 | 0.855027 | 8.306024e-62 | -8.615850e-47 |
| Msa0077370 | Msa1082520 | 0.814749 | 1.314455e-51 | -8.615850e-47 |
| Msa0077370 | Msa1101240 | 0.878389 | 2.921823e-69 | -8.615850e-47 |
| Msa0077370 | Msa1107200 | 0.826395 | 2.777216e-54 | -8.615850e-47 |
| Msa0077370 | Msa1109810 | 0.845405 | 4.144654e-59 | -8.615850e-47 |
| Msa0077370 | Msa1113100 | 0.839464 | 1.559673e-57 | -8.615850e-47 |
| Msa0077370 | Msa1121300 | 0.806953 | 6.402348e-50 | -8.615850e-47 |
| Msa0077370 | Msa1128270 | 0.809271 | 2.054804e-50 | -8.615850e-47 |
| Msa0077370 | Msa1131430 | 0.837802 | 4.191732e-57 | -8.615850e-47 |
| Msa0077370 | Msa1140630 | 0.809706 | 1.656945e-50 | -8.615850e-47 |
| Msa0077370 | Msa1150780 | 0.837779 | 4.250260e-57 | -8.615850e-47 |
| Msa0077370 | Msa1168640 | 0.828332 | 9.536179e-55 | -8.615850e-47 |
| Msa0077370 | Msa1173150 | 0.864950 | 8.405346e-65 | -8.615850e-47 |
| Msa0077370 | Msa1180720 | 0.805207 | 1.491898e-49 | -8.615850e-47 |
| Msa0077370 | Msa1183140 | 0.821777 | 3.371054e-53 | -8.615850e-47 |
| Msa0077370 | Msa1188350 | 0.829441 | 5.139163e-55 | -8.615850e-47 |
| Msa0077370 | Msa1206270 | 0.800010 | 1.761213e-48 | -8.615850e-47 |
| Msa0077370 | Msa1208990 | 0.813743 | 2.192673e-51 | -8.615850e-47 |
| Msa0077370 | Msa1212470 | 0.810292 | 1.239127e-50 | -8.615850e-47 |
| Msa0077370 | Msa1217260 | 0.828877 | 7.040729e-55 | -8.615850e-47 |
| Msa0077370 | Msa1218160 | 0.829200 | 5.880059e-55 | -8.615850e-47 |
| Msa0077370 | Msa1221220 | 0.812919 | 3.327199e-51 | -8.615850e-47 |
| Msa0077370 | Msa1221240 | 0.803307 | 3.710066e-49 | -8.615850e-47 |
| Msa0077370 | Msa1229480 | 0.821207 | 4.563546e-53 | -8.615850e-47 |
| Msa0077370 | Msa1238680 | 0.820427 | 6.897707e-53 | -8.615850e-47 |
| Msa0077370 | Msa1252000 | 0.819679 | 1.023340e-52 | -8.615850e-47 |
| Msa0077370 | Msa1252810 | 0.835164 | 1.967979e-56 | -8.615850e-47 |
| Msa0077370 | Msa1262540 | 0.819588 | 1.073494e-52 | -8.615850e-47 |
| Msa0077370 | Msa1269060 | 0.810073 | 1.381780e-50 | -8.615850e-47 |
| Msa0077370 | Msa1272010 | 0.825686 | 4.094703e-54 | -8.615850e-47 |
| Msa0077370 | Msa1279100 | 0.800179 | 1.626914e-48 | -8.615850e-47 |
| Msa0077370 | Msa1299910 | 0.803494 | 3.394106e-49 | -8.615850e-47 |
| Msa0077370 | Msa1307160 | 0.815672 | 8.199237e-52 | -8.615850e-47 |
| Msa0077370 | Msa1309760 | 0.816403 | 5.629340e-52 | -8.615850e-47 |
| Msa0077370 | Msa1329900 | 0.802421 | 5.654285e-49 | -8.615850e-47 |
| Msa0077370 | Msa1364350 | -0.810964 | 8.869233e-51 | -8.615850e-47 |
| Msa0077370 | Msa1368610 | 0.838433 | 2.883720e-57 | -8.615850e-47 |
| Msa0077370 | Msa1370080 | 0.806260 | 8.967833e-50 | -8.615850e-47 |
| Msa0077370 | Msa1370420 | 0.848726 | 5.099457e-60 | -8.615850e-47 |
| Msa0077370 | Msa1370810 | 0.861941 | 7.200143e-64 | -8.615850e-47 |
| Msa0077370 | Msa1379020 | 0.808333 | 3.260430e-50 | -8.615850e-47 |
| Msa0077370 | Msa1382380 | -0.867203 | 1.627305e-65 | -8.615850e-47 |
| Msa0077370 | Msa1383630 | 0.800940 | 1.138632e-48 | -8.615850e-47 |
| Msa0077370 | Msa1389640 | 0.860807 | 1.596339e-63 | -8.615850e-47 |
| Msa0077370 | Msa1402350 | 0.844143 | 9.075621e-59 | -8.615850e-47 |
| Msa0077370 | Msa1404050 | 0.802091 | 6.611843e-49 | -8.615850e-47 |
| Msa0077370 | Msa1405420 | 0.858700 | 6.881415e-63 | -8.615850e-47 |
| Msa0077370 | Msa1407760 | 0.852411 | 4.699436e-61 | -8.615850e-47 |
| Msa0077370 | Msa1407880 | 0.815154 | 1.068891e-51 | -8.615850e-47 |
| Msa0077370 | Msa1412410 | 0.803838 | 2.879703e-49 | -8.615850e-47 |
| Msa0077370 | Msa1419840 | 0.809732 | 1.636314e-50 | -8.615850e-47 |
| Msa0077370 | Msa1422340 | 0.837298 | 5.646749e-57 | -8.615850e-47 |
| Msa0077370 | Msa1437730 | 0.811581 | 6.518145e-51 | -8.615850e-47 |
| Msa0077370 | Msa1443620 | 0.817897 | 2.598041e-52 | -8.615850e-47 |
| Msa0077370 | Msa1457780 | -0.811435 | 7.011071e-51 | -8.615850e-47 |
| Msa0077370 | Msa1459190 | 0.838517 | 2.744108e-57 | -8.615850e-47 |
| Msa0077370 | Msa1462640 | 0.806504 | 7.967546e-50 | -8.615850e-47 |
| Msa0077370 | Msa1465860 | 0.857989 | 1.120697e-62 | -8.615850e-47 |
PPI
| Gene1 | Gene2 | Type |
|---|
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa0077370 | MtrunA17_Chr1g0187161 | 84.286 | 70 | 11 | 0 | 1 | 70 | 1 | 70 | 4.87e-37 | 118 |
| Msa0077370 | MtrunA17_Chr1g0187201 | 88.235 | 68 | 8 | 0 | 3 | 70 | 4 | 71 | 8.29e-37 | 117 |
| Msa0077370 | MtrunA17_Chr1g0187221 | 81.429 | 70 | 13 | 0 | 1 | 70 | 3 | 72 | 1.67e-35 | 114 |
| Msa0077370 | MtrunA17_Chr5g0442291 | 82.857 | 70 | 12 | 0 | 1 | 70 | 1 | 70 | 3.98e-35 | 113 |
| Msa0077370 | MtrunA17_Chr1g0184411 | 54.286 | 70 | 32 | 0 | 1 | 70 | 1 | 70 | 1.24e-20 | 77.0 |
| Msa0077370 | MtrunA17_Chr1g0184401 | 53.030 | 66 | 31 | 0 | 5 | 70 | 8 | 73 | 6.82e-18 | 70.1 |
| Msa0077370 | MtrunA17_Chr5g0419531 | 53.030 | 66 | 31 | 0 | 5 | 70 | 4 | 69 | 1.72e-17 | 68.9 |
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa0077370 | AT2G38870.1 | 52.857 | 70 | 33 | 0 | 1 | 70 | 1 | 70 | 1.55e-20 | 77.0 |
| Msa0077370 | AT5G43580.1 | 48.611 | 72 | 35 | 1 | 1 | 70 | 28 | 99 | 8.35e-18 | 70.9 |
| Msa0077370 | AT3G46860.1 | 42.857 | 70 | 37 | 1 | 4 | 70 | 16 | 85 | 6.68e-13 | 58.2 |
| Msa0077370 | AT2G38900.2 | 45.312 | 64 | 35 | 0 | 7 | 70 | 25 | 88 | 1.56e-12 | 57.4 |
| Msa0077370 | AT2G38900.1 | 45.312 | 64 | 35 | 0 | 7 | 70 | 10 | 73 | 1.94e-12 | 56.6 |
| Msa0077370 | AT5G43570.1 | 46.575 | 73 | 33 | 1 | 1 | 67 | 1 | 73 | 1.43e-11 | 55.1 |
Find 33 sgRNAs with CRISPR-Local
Find 38 sgRNAs with CRISPR-GE
CRISPR-Local
| sgRNA_sequence | on_target_score | Position | Region |
|---|---|---|---|
| TTTGCAATTCTTCTTGTGTT+TGG | 0.271522 | 1_2:-54247474 | None:intergenic |
| CAACGACAGGGTTTGGGTTT+GGG | 0.289389 | 1_2:+54247808 | Msa0077370:CDS |
| GCAACGACAGGGTTTGGGTT+TGG | 0.327218 | 1_2:+54247807 | Msa0077370:CDS |
| GACACTTTCTATCCAATTGT+TGG | 0.347121 | 1_2:-54247860 | None:intergenic |
| ATAAATTTAATGTTTCAATA+AGG | 0.348781 | 1_2:+54247915 | Msa0077370:three_prime_UTR |
| ACTTACGCAACGACAGGGTT+TGG | 0.351229 | 1_2:+54247801 | Msa0077370:CDS |
| CTTACGCAACGACAGGGTTT+GGG | 0.360903 | 1_2:+54247802 | Msa0077370:CDS |
| GTCACTCAGGTTCCAACAAT+TGG | 0.363160 | 1_2:+54247848 | Msa0077370:CDS |
| TATAATAAGTAGTATACAAT+TGG | 0.368616 | 1_2:-54247951 | None:intergenic |
| TGGGTTTGGGTTAATAAAGA+TGG | 0.418377 | 1_2:+54247821 | Msa0077370:CDS |
| TACATATTGAAGGATCAAAA+AGG | 0.425186 | 1_2:+54247526 | Msa0077370:five_prime_UTR |
| CCTTCCACTCCAACCAACTC+TGG | 0.454716 | 1_2:-54247695 | None:intergenic |
| AATGCCATCATTGTGCTAGA+AGG | 0.471882 | 1_2:+54247761 | Msa0077370:CDS |
| GAAACATTAAATTTATGACT+TGG | 0.485653 | 1_2:-54247908 | None:intergenic |
| AAAATAGTCATACATATTGA+AGG | 0.494025 | 1_2:+54247516 | Msa0077370:five_prime_UTR |
| CCAGAGTTGGTTGGAGTGGA+AGG | 0.515293 | 1_2:+54247695 | Msa0077370:CDS |
| TGTTCTCAGCTAAGAGCTCA+TGG | 0.516002 | 1_2:+54247672 | Msa0077370:intron |
| CCGACGACTTACGCAACGAC+AGG | 0.517888 | 1_2:+54247795 | Msa0077370:CDS |
| GTTGGTTGGAGTGGAAGGAA+AGG | 0.527079 | 1_2:+54247700 | Msa0077370:CDS |
| CAGTGTCATATATAATTCCT+TGG | 0.530851 | 1_2:-54248045 | None:intergenic |
| AGATCCTTCTAGCACAATGA+TGG | 0.537596 | 1_2:-54247765 | None:intergenic |
| ATGGCCAGAGTTGGTTGGAG+TGG | 0.564909 | 1_2:+54247691 | Msa0077370:CDS |
| AATTCAGAGGGAGAATCCAT+TGG | 0.572843 | 1_2:+54247736 | Msa0077370:CDS |
| TAAGAGCTCATGGCCAGAGT+TGG | 0.573671 | 1_2:+54247682 | Msa0077370:CDS |
| AGCTCATGGCCAGAGTTGGT+TGG | 0.578782 | 1_2:+54247686 | Msa0077370:CDS |
| TAAAGATGGAATTGTCACTC+AGG | 0.589757 | 1_2:+54247835 | Msa0077370:CDS |
| AGCAGAAGCTACAATTCAGA+GGG | 0.593359 | 1_2:+54247724 | Msa0077370:CDS |
| TAGCAGAAGCTACAATTCAG+AGG | 0.596029 | 1_2:+54247723 | Msa0077370:CDS |
| CCTGTCGTTGCGTAAGTCGT+CGG | 0.616539 | 1_2:-54247795 | None:intergenic |
| CGACGACTTACGCAACGACA+GGG | 0.619969 | 1_2:+54247796 | Msa0077370:CDS |
| CAATTGGATAGAAAGTGTCA+TGG | 0.634335 | 1_2:+54247864 | Msa0077370:exon |
| ACAATGATGGCATTCACCAA+TGG | 0.650325 | 1_2:-54247752 | None:intergenic |
| AAAATGTCTGATGAATGCAA+AGG | 0.675933 | 1_2:+54247555 | Msa0077370:exon |
CRISPR-GE
| badsite warning | sgRNA_sequence | Strand | Position | Region | GC_content |
|---|---|---|---|---|---|
| !! | GATATGAATAATAAATTAAA+TGG | + | chr1_2:54247602-54247621 | Msa0077370:intron | 10.0% |
| !! | ATAAATTTAATGTTTCAATA+AGG | + | chr1_2:54247915-54247934 | Msa0077370:three_prime_UTR | 10.0% |
| !! | TATAATAAGTAGTATACAAT+TGG | - | chr1_2:54247954-54247973 | None:intergenic | 15.0% |
| !! | AATTGCAAAAAGAAAGAAAA+AGG | + | chr1_2:54247488-54247507 | Msa0077370:five_prime_UTR | 20.0% |
| !! | AAAATAGTCATACATATTGA+AGG | + | chr1_2:54247516-54247535 | Msa0077370:five_prime_UTR | 20.0% |
| !! | GAAACATTAAATTTATGACT+TGG | - | chr1_2:54247911-54247930 | None:intergenic | 20.0% |
| ! | TACATATTGAAGGATCAAAA+AGG | + | chr1_2:54247526-54247545 | Msa0077370:five_prime_UTR | 25.0% |
| !!! | GTTTTTTATTTTCTATGCCA+AGG | + | chr1_2:54248028-54248047 | Msa0077370:three_prime_UTR | 25.0% |
| TTTGCAATTCTTCTTGTGTT+TGG | - | chr1_2:54247477-54247496 | None:intergenic | 30.0% | |
| AAAATGTCTGATGAATGCAA+AGG | + | chr1_2:54247555-54247574 | Msa0077370:exon | 30.0% | |
| CAGTGTCATATATAATTCCT+TGG | - | chr1_2:54248048-54248067 | None:intergenic | 30.0% | |
| ! | TGGGTTTGGGTTAATAAAGA+TGG | + | chr1_2:54247821-54247840 | Msa0077370:CDS | 35.0% |
| TAAAGATGGAATTGTCACTC+AGG | + | chr1_2:54247835-54247854 | Msa0077370:CDS | 35.0% | |
| GACACTTTCTATCCAATTGT+TGG | - | chr1_2:54247863-54247882 | None:intergenic | 35.0% | |
| !! | CAATTGGATAGAAAGTGTCA+TGG | + | chr1_2:54247864-54247883 | Msa0077370:exon | 35.0% |
| GTCTGATGAATGCAAAGGTA+AGG | + | chr1_2:54247560-54247579 | Msa0077370:intron | 40.0% | |
| TAGCAGAAGCTACAATTCAG+AGG | + | chr1_2:54247723-54247742 | Msa0077370:CDS | 40.0% | |
| AGCAGAAGCTACAATTCAGA+GGG | + | chr1_2:54247724-54247743 | Msa0077370:CDS | 40.0% | |
| AATTCAGAGGGAGAATCCAT+TGG | + | chr1_2:54247736-54247755 | Msa0077370:CDS | 40.0% | |
| ACAATGATGGCATTCACCAA+TGG | - | chr1_2:54247755-54247774 | None:intergenic | 40.0% | |
| AATGCCATCATTGTGCTAGA+AGG | + | chr1_2:54247761-54247780 | Msa0077370:CDS | 40.0% | |
| AGATCCTTCTAGCACAATGA+TGG | - | chr1_2:54247768-54247787 | None:intergenic | 40.0% | |
| TGTTCTCAGCTAAGAGCTCA+TGG | + | chr1_2:54247672-54247691 | Msa0077370:intron | 45.0% | |
| GTCACTCAGGTTCCAACAAT+TGG | + | chr1_2:54247848-54247867 | Msa0077370:CDS | 45.0% | |
| !!! | AAATTTTTATTATAATTTGA+TGG | + | chr1_2:54247631-54247650 | Msa0077370:intron | 5.0% |
| TAAGAGCTCATGGCCAGAGT+TGG | + | chr1_2:54247682-54247701 | Msa0077370:CDS | 50.0% | |
| GTTGGTTGGAGTGGAAGGAA+AGG | + | chr1_2:54247700-54247719 | Msa0077370:CDS | 50.0% | |
| ACTTACGCAACGACAGGGTT+TGG | + | chr1_2:54247801-54247820 | Msa0077370:CDS | 50.0% | |
| CTTACGCAACGACAGGGTTT+GGG | + | chr1_2:54247802-54247821 | Msa0077370:CDS | 50.0% | |
| ! | CAACGACAGGGTTTGGGTTT+GGG | + | chr1_2:54247808-54247827 | Msa0077370:CDS | 50.0% |
| ! | AGCTCATGGCCAGAGTTGGT+TGG | + | chr1_2:54247686-54247705 | Msa0077370:CDS | 55.0% |
| ! | ATGGCCAGAGTTGGTTGGAG+TGG | + | chr1_2:54247691-54247710 | Msa0077370:CDS | 55.0% |
| CCTTCCACTCCAACCAACTC+TGG | - | chr1_2:54247698-54247717 | None:intergenic | 55.0% | |
| ! | CCAGAGTTGGTTGGAGTGGA+AGG | + | chr1_2:54247695-54247714 | Msa0077370:CDS | 55.0% |
| CCTGTCGTTGCGTAAGTCGT+CGG | - | chr1_2:54247798-54247817 | None:intergenic | 55.0% | |
| CGACGACTTACGCAACGACA+GGG | + | chr1_2:54247796-54247815 | Msa0077370:CDS | 55.0% | |
| ! | GCAACGACAGGGTTTGGGTT+TGG | + | chr1_2:54247807-54247826 | Msa0077370:CDS | 55.0% |
| CCGACGACTTACGCAACGAC+AGG | + | chr1_2:54247795-54247814 | Msa0077370:CDS | 60.0% |
| Chromosome | Type | Strat | End | Strand | Name |
|---|---|---|---|---|---|
| chr1_2 | gene | 54247457 | 54248081 | 54247457 | ID=Msa0077370;Name=Msa0077370 |
| chr1_2 | mRNA | 54247457 | 54248081 | 54247457 | ID=Msa0077370-mRNA-1;Parent=Msa0077370;Name=Msa0077370-mRNA-1;_AED=0.25;_eAED=0.25;_QI=101|1|1|1|1|1|2|207|70 |
| chr1_2 | exon | 54247457 | 54247576 | 54247457 | ID=Msa0077370-mRNA-1:exon:16735;Parent=Msa0077370-mRNA-1 |
| chr1_2 | exon | 54247681 | 54248081 | 54247681 | ID=Msa0077370-mRNA-1:exon:16736;Parent=Msa0077370-mRNA-1 |
| chr1_2 | five_prime_UTR | 54247457 | 54247557 | 54247457 | ID=Msa0077370-mRNA-1:five_prime_utr;Parent=Msa0077370-mRNA-1 |
| chr1_2 | CDS | 54247558 | 54247576 | 54247558 | ID=Msa0077370-mRNA-1:cds;Parent=Msa0077370-mRNA-1 |
| chr1_2 | CDS | 54247681 | 54247874 | 54247681 | ID=Msa0077370-mRNA-1:cds;Parent=Msa0077370-mRNA-1 |
| chr1_2 | three_prime_UTR | 54247875 | 54248081 | 54247875 | ID=Msa0077370-mRNA-1:three_prime_utr;Parent=Msa0077370-mRNA-1 |
| Gene Sequence |
| Protein sequence |
