Alfalfa Gene Editing Database
Alfalfa Gene Editing Database
| Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa1019090 | XP_013448504.1 | 99.597 | 248 | 1 | 0 | 1 | 248 | 1 | 248 | 2.95e-178 | 499 |
| Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa1019090 | sp|Q9M3V8|RS6_ASPOF | 93.145 | 248 | 16 | 1 | 1 | 248 | 1 | 247 | 1.09e-168 | 468 |
| Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa1019090 | A0A072TZB9 | 99.597 | 248 | 1 | 0 | 1 | 248 | 1 | 248 | 1.41e-178 | 499 |
| Gene ID | Type | Classification |
|---|
| Gene ID | Type | Classification |
|---|
Co-expression Network
| Gene1 | Gene2 | correlation coefficient | p_value | FDR |
|---|---|---|---|---|
| Msa0007810 | Msa1019090 | -0.819423 | 1.170676e-52 | -8.615850e-47 |
| Msa0037180 | Msa1019090 | 0.803440 | 3.482102e-49 | -8.615850e-47 |
| Msa0044010 | Msa1019090 | 0.856084 | 4.084589e-62 | -8.615850e-47 |
| Msa0053260 | Msa1019090 | -0.809095 | 2.240979e-50 | -8.615850e-47 |
| Msa0056230 | Msa1019090 | -0.816644 | 4.971371e-52 | -8.615850e-47 |
| Msa0077320 | Msa1019090 | 0.811610 | 6.422230e-51 | -8.615850e-47 |
| Msa0089540 | Msa1019090 | 0.804656 | 1.945713e-49 | -8.615850e-47 |
| Msa0619300 | Msa1019090 | 0.801303 | 9.595635e-49 | -8.615850e-47 |
| Msa0622230 | Msa1019090 | 0.802996 | 4.303892e-49 | -8.615850e-47 |
| Msa0681220 | Msa1019090 | 0.805786 | 1.128049e-49 | -8.615850e-47 |
| Msa0685390 | Msa1019090 | -0.818623 | 1.779595e-52 | -8.615850e-47 |
| Msa0689660 | Msa1019090 | 0.814133 | 1.799092e-51 | -8.615850e-47 |
| Msa0702690 | Msa1019090 | -0.806038 | 9.988949e-50 | -8.615850e-47 |
| Msa0704690 | Msa1019090 | 0.824218 | 9.094410e-54 | -8.615850e-47 |
| Msa0745140 | Msa1019090 | 0.815550 | 8.728487e-52 | -8.615850e-47 |
| Msa0748350 | Msa1019090 | 0.800539 | 1.374796e-48 | -8.615850e-47 |
| Msa0765110 | Msa1019090 | 0.807981 | 3.876106e-50 | -8.615850e-47 |
| Msa0776640 | Msa1019090 | 0.816693 | 4.848486e-52 | -8.615850e-47 |
| Msa0790450 | Msa1019090 | 0.811477 | 6.865930e-51 | -8.615850e-47 |
| Msa0825920 | Msa1019090 | 0.817826 | 2.696244e-52 | -8.615850e-47 |
| Msa0169710 | Msa1019090 | 0.829938 | 3.889731e-55 | -8.615850e-47 |
| Msa0174060 | Msa1019090 | -0.803847 | 2.867051e-49 | -8.615850e-47 |
| Msa0183840 | Msa1019090 | 0.820884 | 5.417994e-53 | -8.615850e-47 |
| Msa0192050 | Msa1019090 | 0.851553 | 8.235065e-61 | -8.615850e-47 |
| Msa0195030 | Msa1019090 | 0.819893 | 9.144860e-53 | -8.615850e-47 |
| Msa0211460 | Msa1019090 | 0.807187 | 5.712708e-50 | -8.615850e-47 |
| Msa0237180 | Msa1019090 | 0.831578 | 1.541987e-55 | -8.615850e-47 |
| Msa0371350 | Msa1019090 | -0.803822 | 2.901523e-49 | -8.615850e-47 |
| Msa0372100 | Msa1019090 | 0.824957 | 6.090820e-54 | -8.615850e-47 |
| Msa0385030 | Msa1019090 | 0.825683 | 4.101197e-54 | -8.615850e-47 |
| Msa0388250 | Msa1019090 | 0.837885 | 3.990876e-57 | -8.615850e-47 |
| Msa0416210 | Msa1019090 | 0.828132 | 1.065735e-54 | -8.615850e-47 |
| Msa0419420 | Msa1019090 | -0.820194 | 7.800934e-53 | -8.615850e-47 |
| Msa0433630 | Msa1019090 | 0.813185 | 2.909384e-51 | -8.615850e-47 |
| Msa0476730 | Msa1019090 | -0.801824 | 7.501900e-49 | -8.615850e-47 |
| Msa1000780 | Msa1019090 | 0.802494 | 5.463340e-49 | -8.615850e-47 |
| Msa1014550 | Msa1019090 | -0.809429 | 1.900525e-50 | -8.615850e-47 |
| Msa1019090 | Msa1025200 | 0.832248 | 1.053389e-55 | -8.615850e-47 |
| Msa1019090 | Msa1025220 | 0.823258 | 1.525972e-53 | -8.615850e-47 |
| Msa1019090 | Msa1078280 | -0.812077 | 5.083107e-51 | -8.615850e-47 |
| Msa1019090 | Msa1078590 | -0.816258 | 6.067818e-52 | -8.615850e-47 |
| Msa1019090 | Msa1078760 | -0.817456 | 3.267675e-52 | -8.615850e-47 |
| Msa1019090 | Msa1085570 | -0.831970 | 1.234396e-55 | -8.615850e-47 |
| Msa1019090 | Msa1093190 | -0.812315 | 4.508931e-51 | -8.615850e-47 |
| Msa1019090 | Msa1109310 | 0.826365 | 2.824239e-54 | -8.615850e-47 |
| Msa1019090 | Msa1123490 | -0.812732 | 3.656456e-51 | -8.615850e-47 |
| Msa1019090 | Msa1136970 | -0.806699 | 7.247610e-50 | -8.615850e-47 |
| Msa1019090 | Msa1147650 | 0.843190 | 1.631737e-58 | -8.615850e-47 |
| Msa1019090 | Msa1169590 | -0.823011 | 1.742463e-53 | -8.615850e-47 |
| Msa1019090 | Msa1200360 | 0.808558 | 2.920412e-50 | -8.615850e-47 |
| Msa1019090 | Msa1213470 | -0.818532 | 1.865897e-52 | -8.615850e-47 |
| Msa1019090 | Msa1253300 | 0.803692 | 3.087458e-49 | -8.615850e-47 |
| Msa1019090 | Msa1300370 | -0.820320 | 7.301681e-53 | -8.615850e-47 |
| Msa1019090 | Msa1363270 | -0.839715 | 1.342252e-57 | -8.615850e-47 |
| Msa1019090 | Msa1363280 | -0.863950 | 1.726533e-64 | -8.615850e-47 |
| Msa1019090 | Msa1366140 | -0.826904 | 2.099916e-54 | -8.615850e-47 |
| Msa1019090 | Msa1387450 | -0.829461 | 5.082579e-55 | -8.615850e-47 |
| Msa1019090 | Msa1450560 | 0.807608 | 4.651964e-50 | -8.615850e-47 |
| Msa0240590 | Msa1019090 | -0.802840 | 4.635744e-49 | -8.615850e-47 |
| Msa0261460 | Msa1019090 | 0.812254 | 4.651165e-51 | -8.615850e-47 |
| Msa0269220 | Msa1019090 | -0.833996 | 3.868399e-56 | -8.615850e-47 |
| Msa0307430 | Msa1019090 | 0.824506 | 7.779513e-54 | -8.615850e-47 |
| Msa0312740 | Msa1019090 | 0.827172 | 1.811471e-54 | -8.615850e-47 |
| Msa0315660 | Msa1019090 | 0.828386 | 9.251590e-55 | -8.615850e-47 |
| Msa0340270 | Msa1019090 | 0.805577 | 1.248208e-49 | -8.615850e-47 |
| Msa0521510 | Msa1019090 | 0.822911 | 1.839023e-53 | -8.615850e-47 |
| Msa0526490 | Msa1019090 | -0.845806 | 3.227503e-59 | -8.615850e-47 |
| Msa0526500 | Msa1019090 | -0.859406 | 4.229910e-63 | -8.615850e-47 |
| Msa0545750 | Msa1019090 | -0.803997 | 2.668341e-49 | -8.615850e-47 |
| Msa0563440 | Msa1019090 | 0.805049 | 1.610555e-49 | -8.615850e-47 |
| Msa0575960 | Msa1019090 | -0.816060 | 6.717670e-52 | -8.615850e-47 |
| Msa0857260 | Msa1019090 | 0.831025 | 2.108885e-55 | -8.615850e-47 |
| Msa0865420 | Msa1019090 | 0.807101 | 5.956922e-50 | -8.615850e-47 |
| Msa0913520 | Msa1019090 | 0.817444 | 3.287129e-52 | -8.615850e-47 |
| Msa0926310 | Msa1019090 | 0.813647 | 2.302527e-51 | -8.615850e-47 |
PPI
| Gene1 | Gene2 | Type |
|---|
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa1019090 | MtrunA17_Chr7g0234621 | 99.597 | 248 | 1 | 0 | 1 | 248 | 1 | 248 | 0.0 | 499 |
| Msa1019090 | MtrunA17_Chr4g0047021 | 96.371 | 248 | 9 | 0 | 1 | 248 | 1 | 248 | 3.84e-176 | 484 |
| Msa1019090 | MtrunA17_Chr2g0282411 | 96.371 | 248 | 9 | 0 | 1 | 248 | 1 | 248 | 4.38e-176 | 484 |
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa1019090 | AT5G10360.1 | 91.532 | 248 | 21 | 0 | 1 | 248 | 1 | 248 | 3.17e-166 | 459 |
| Msa1019090 | AT4G31700.1 | 91.200 | 250 | 20 | 1 | 1 | 248 | 1 | 250 | 5.35e-158 | 438 |
| Msa1019090 | AT5G10360.2 | 73.387 | 248 | 14 | 1 | 1 | 248 | 1 | 196 | 2.75e-121 | 343 |
| Msa1019090 | AT4G31700.2 | 89.894 | 188 | 17 | 1 | 63 | 248 | 1 | 188 | 3.60e-108 | 310 |
Find 101 sgRNAs with CRISPR-Local
Find 191 sgRNAs with CRISPR-GE
CRISPR-Local
| sgRNA_sequence | on_target_score | Position | Region |
|---|---|---|---|
| CAATCCTTGCTCTCTTTCTT+TGG | 0.173886 | 7_1:-40250943 | None:intergenic |
| GAATTTGCAGACGAGCATTT+TGG | 0.208379 | 7_1:+40249488 | Msa1019090:intron |
| GGCGATTCTCTTCTTCTTAT+CGG | 0.223662 | 7_1:-40250966 | None:intergenic |
| AGCGAAGTTTATATTGTTCT+TGG | 0.225712 | 7_1:-40248632 | None:intergenic |
| CATTATATCCTCCCACAATT+AGG | 0.258816 | 7_1:+40251301 | Msa1019090:three_prime_UTR |
| ATTGTTCTTGGTGTGATTCT+TGG | 0.260100 | 7_1:-40248620 | None:intergenic |
| ACCAGAAGCTTCTTGCTTCC+AGG | 0.274677 | 7_1:+40251014 | Msa1019090:CDS |
| TTGAGATTAGACTTGTAAAA+TGG | 0.310062 | 7_1:+40251441 | Msa1019090:three_prime_UTR |
| TTATTTCGTTGCAGGGAAAA+AGG | 0.317717 | 7_1:+40250874 | Msa1019090:intron |
| TGGTACTAACAGGAATTTAA+AGG | 0.323051 | 7_1:+40249636 | Msa1019090:intron |
| AGTAACTAGTCTTTGTATCT+TGG | 0.331940 | 7_1:-40250909 | None:intergenic |
| CGGATCTTGGACGCTCTCTT+AGG | 0.339335 | 7_1:-40250229 | None:intergenic |
| TTGTTCTTGGTGTGATTCTT+GGG | 0.343140 | 7_1:-40248619 | None:intergenic |
| TCATACCATCACCACAGTTT+TGG | 0.354776 | 7_1:+40251131 | Msa1019090:three_prime_UTR |
| GTTGAAAAGCTTACGGATCT+TGG | 0.369922 | 7_1:-40250242 | None:intergenic |
| CTCTTTCTTTGGAGTGTAAG+AGG | 0.370544 | 7_1:-40250932 | None:intergenic |
| GTTAGGACTCCCTGCTTCAT+TGG | 0.374604 | 7_1:-40249702 | None:intergenic |
| GTGTTCGTCTGTTGCTTCAC+AGG | 0.378377 | 7_1:+40249733 | Msa1019090:CDS |
| ACCTGGAAGCAAGAAGCTTC+TGG | 0.379692 | 7_1:-40251015 | None:intergenic |
| ACTGTCATAGAATAGAATTT+TGG | 0.381119 | 7_1:+40251389 | Msa1019090:three_prime_UTR |
| AGACCTTTCTGTTCTGAACT+TGG | 0.382910 | 7_1:+40250138 | Msa1019090:CDS |
| GTAACTAGTCTTTGTATCTT+GGG | 0.392706 | 7_1:-40250908 | None:intergenic |
| CTCTTAGGACCTCTCATCCT+TGG | 0.398073 | 7_1:-40250214 | None:intergenic |
| GGATTTCACAAGAGGTCAAT+GGG | 0.417305 | 7_1:+40249518 | Msa1019090:CDS |
| TGCCTTAGCACTGGAAATCC+TGG | 0.423380 | 7_1:-40251086 | None:intergenic |
| GCTTCTTGCTTCCAGGTTGA+AGG | 0.423629 | 7_1:+40251021 | Msa1019090:CDS |
| CTTGCTTTCGTGGGCATGGA+AGG | 0.423949 | 7_1:+40250065 | Msa1019090:CDS |
| TCCTTGTTTGTCACAACCTC+CGG | 0.446389 | 7_1:-40249676 | None:intergenic |
| ATCATAAGAATCCTAATTGT+GGG | 0.452966 | 7_1:-40251312 | None:intergenic |
| AAGTTCAGAACAGAAAGGTC+TGG | 0.453108 | 7_1:-40250136 | None:intergenic |
| CTCTCTCTGCTCCTTCAACC+TGG | 0.453539 | 7_1:-40251032 | None:intergenic |
| TGTTCGTCTGTTGCTTCACA+GGG | 0.455437 | 7_1:+40249734 | Msa1019090:CDS |
| TCTATTCTATGACAGTTGTA+AGG | 0.458478 | 7_1:-40251382 | None:intergenic |
| GACGAACACGGCCAGGGGTT+AGG | 0.458847 | 7_1:-40249719 | None:intergenic |
| TTGTAAAATGGTGCGAGTAT+AGG | 0.463897 | 7_1:+40251453 | Msa1019090:three_prime_UTR |
| AGCAACAGACGAACACGGCC+AGG | 0.465092 | 7_1:-40249726 | None:intergenic |
| TGAAGAAGATTGCAATATGA+AGG | 0.465282 | 7_1:+40248746 | Msa1019090:exon |
| ACTCCTTGCTTTCGTGGGCA+TGG | 0.465842 | 7_1:+40250061 | Msa1019090:CDS |
| CTTCTCAACATCGGTCAGGC+CGG | 0.479719 | 7_1:-40250191 | None:intergenic |
| ACAAGGATTTCCAATGAAGC+AGG | 0.479949 | 7_1:+40249692 | Msa1019090:CDS |
| GAACTTGGTAATTGTGAAGA+AGG | 0.488543 | 7_1:+40250153 | Msa1019090:CDS |
| TAGACAGGTTGAAAAGCTTA+CGG | 0.491080 | 7_1:-40250249 | None:intergenic |
| ACAGGAACTCCTTGCTTTCG+TGG | 0.493316 | 7_1:+40250055 | Msa1019090:intron |
| CGCAGGAGGAAGTCCGTTCG+TGG | 0.499221 | 7_1:+40250100 | Msa1019090:CDS |
| CGTGGGCATGGAAGGCGTAA+TGG | 0.499837 | 7_1:+40250073 | Msa1019090:CDS |
| TTCTCAACATCGGTCAGGCC+GGG | 0.500903 | 7_1:-40250190 | None:intergenic |
| CTCACGGTAAGATGAAAACT+AGG | 0.503621 | 7_1:-40248666 | None:intergenic |
| GAGGTCAATGGGGATGCTCT+TGG | 0.504931 | 7_1:+40249529 | Msa1019090:CDS |
| TTGGCTTCTCAACATCGGTC+AGG | 0.507183 | 7_1:-40250195 | None:intergenic |
| AGGATTTCACAAGAGGTCAA+TGG | 0.507253 | 7_1:+40249517 | Msa1019090:CDS |
| ATCCAGGATTTCCAGTGCTA+AGG | 0.509483 | 7_1:+40251084 | Msa1019090:CDS |
| TCACATCATCATCCTTAGAC+AGG | 0.513297 | 7_1:-40250264 | None:intergenic |
| AATCATAAGAATCCTAATTG+TGG | 0.517802 | 7_1:-40251313 | None:intergenic |
| TCTGTCATGACAAATACAAA+TGG | 0.528698 | 7_1:+40251174 | Msa1019090:three_prime_UTR |
| AGTTCAGAACAGAAAGGTCT+GGG | 0.537667 | 7_1:-40250135 | None:intergenic |
| TGTTGTAAATGTCCTACGGT+AGG | 0.539789 | 7_1:-40250302 | None:intergenic |
| AGGACATTTACAACAAAAGC+TGG | 0.541932 | 7_1:+40250310 | Msa1019090:CDS |
| CAAGACCAAAACTGTGGTGA+TGG | 0.544126 | 7_1:-40251136 | None:intergenic |
| GCTGACAATGCACCCACGAA+CGG | 0.547404 | 7_1:-40250113 | None:intergenic |
| GCAACAGACGAACACGGCCA+GGG | 0.547657 | 7_1:-40249725 | None:intergenic |
| CAGGAACTCCTTGCTTTCGT+GGG | 0.551855 | 7_1:+40250056 | Msa1019090:intron |
| GGCGTAATGGAGAGCGCAGG+AGG | 0.556424 | 7_1:+40250086 | Msa1019090:CDS |
| CACTCCAAAGAAAGAGAGCA+AGG | 0.560832 | 7_1:+40250939 | Msa1019090:CDS |
| AATGTTGCGAATCCCACCAC+TGG | 0.561300 | 7_1:+40248899 | Msa1019090:CDS |
| TAAGGCAGCTGTCACCGCCT+AGG | 0.568165 | 7_1:+40251102 | Msa1019090:CDS |
| CTTCCATGCCCACGAAAGCA+AGG | 0.568809 | 7_1:-40250064 | None:intergenic |
| GGACAAGAGGATTTCACAAG+AGG | 0.571370 | 7_1:+40249510 | Msa1019090:CDS |
| AAGCAGGGAGTCCTAACCCC+TGG | 0.578908 | 7_1:+40249708 | Msa1019090:CDS |
| TGACCGATGTTGAGAAGCCA+AGG | 0.592857 | 7_1:+40250197 | Msa1019090:CDS |
| CTCAATTTCGAGAACAAGGT+AGG | 0.593837 | 7_1:-40251423 | None:intergenic |
| GGTGACAGCTGCCTTAGCAC+TGG | 0.594937 | 7_1:-40251095 | None:intergenic |
| CATCCTTGGCTTCTCAACAT+CGG | 0.602359 | 7_1:-40250200 | None:intergenic |
| TGATGGTATGACAGCAACCT+AGG | 0.603936 | 7_1:-40251119 | None:intergenic |
| GTTGAGAAGCCAAGGATGAG+AGG | 0.608216 | 7_1:+40250205 | Msa1019090:CDS |
| TAATCTCAATTTCGAGAACA+AGG | 0.608980 | 7_1:-40251427 | None:intergenic |
| CAACTCAACAACCGCCGCGT+CGG | 0.612640 | 7_1:-40248725 | None:intergenic |
| AATCGCCAAGGCAAAATCAG+AGG | 0.625414 | 7_1:+40250982 | Msa1019090:CDS |
| GCAGGAGGAAGTCCGTTCGT+GGG | 0.626781 | 7_1:+40250101 | Msa1019090:CDS |
| CAAGGATTTCCAATGAAGCA+GGG | 0.632810 | 7_1:+40249693 | Msa1019090:CDS |
| GAAGGCGTAATGGAGAGCGC+AGG | 0.640543 | 7_1:+40250083 | Msa1019090:CDS |
| CAATGGGGATGCTCTTGGTG+AGG | 0.642872 | 7_1:+40249534 | Msa1019090:CDS |
| ACCGCCGCGTCGGAGTGTAA+CGG | 0.650933 | 7_1:-40248715 | None:intergenic |
| AACTTGGTAATTGTGAAGAA+GGG | 0.654902 | 7_1:+40250154 | Msa1019090:CDS |
| TGTGAAGCAACAGACGAACA+CGG | 0.657981 | 7_1:-40249731 | None:intergenic |
| CAACAGACGAACACGGCCAG+GGG | 0.659590 | 7_1:-40249724 | None:intergenic |
| GAATGCTGAAGACATGCTCA+CGG | 0.664310 | 7_1:-40248682 | None:intergenic |
| TAAGAAGAAGAGAATCGCCA+AGG | 0.666176 | 7_1:+40250970 | Msa1019090:CDS |
| TCACGGTAAGATGAAAACTA+GGG | 0.666305 | 7_1:-40248665 | None:intergenic |
| AAGGGTGAGAATGATTTACC+CGG | 0.666590 | 7_1:+40250172 | Msa1019090:CDS |
| TTACCAAGTTCAGAACAGAA+AGG | 0.669660 | 7_1:-40250141 | None:intergenic |
| ATAAGAATCCTAATTGTGGG+AGG | 0.673428 | 7_1:-40251309 | None:intergenic |
| AAATGGTGCGAGTATAGGTG+TGG | 0.677858 | 7_1:+40251458 | Msa1019090:three_prime_UTR |
| TCCGTTACACTCCGACGCGG+CGG | 0.678324 | 7_1:+40248714 | Msa1019090:five_prime_UTR |
| ACCGGAGGTTGTGACAAACA+AGG | 0.687549 | 7_1:+40249675 | Msa1019090:CDS |
| AAATAACAAGACCAAAACTG+TGG | 0.697491 | 7_1:-40251142 | None:intergenic |
| AGTATGTCAACACCTACCGT+AGG | 0.700274 | 7_1:+40250290 | Msa1019090:CDS |
| GTTCGTCTGTTGCTTCACAG+GGG | 0.715022 | 7_1:+40249735 | Msa1019090:CDS |
| GATTTCACAAGAGGTCAATG+GGG | 0.738312 | 7_1:+40249519 | Msa1019090:CDS |
| TGTCTAAGGATGATGATGTG+AGG | 0.746514 | 7_1:+40250266 | Msa1019090:CDS |
| TGGTATGACAGCAACCTAGG+CGG | 0.774656 | 7_1:-40251116 | None:intergenic |
| CTCTCCGTTACACTCCGACG+CGG | 0.786284 | 7_1:+40248711 | Msa1019090:five_prime_UTR |
CRISPR-GE
| badsite warning | sgRNA_sequence | Strand | Position | Region | GC_content |
|---|---|---|---|---|---|
| !! | AAAAAAAAAAAAGAGAATTA+TGG | - | chr7_1:40248788-40248807 | None:intergenic | 10.0% |
| !! | TTAAAATAAACAAGTAAAAT+GGG | - | chr7_1:40248976-40248995 | None:intergenic | 10.0% |
| !!! | TTTAAAATAAACAAGTAAAA+TGG | - | chr7_1:40248977-40248996 | None:intergenic | 10.0% |
| !!! | TACAAATTTAAAATCTTTTT+GGG | - | chr7_1:40249065-40249084 | None:intergenic | 10.0% |
| !! | CATTCTATTAAATATAAATA+AGG | - | chr7_1:40250496-40250515 | None:intergenic | 10.0% |
| !!! | ATTTTGATATATATTCTAAA+TGG | + | chr7_1:40250845-40250864 | Msa1019090:intron | 10.0% |
| !!! | GTACAAATTTAAAATCTTTT+TGG | - | chr7_1:40249066-40249085 | None:intergenic | 15.0% |
| !!! | TTGTTTTTTGTGATATATAT+TGG | + | chr7_1:40249391-40249410 | Msa1019090:intron | 15.0% |
| !! | ATAACAATTTATCATCAAAT+AGG | - | chr7_1:40249864-40249883 | None:intergenic | 15.0% |
| !!! | ATTTTTAATAGAAATAGGTA+GGG | - | chr7_1:40249977-40249996 | None:intergenic | 15.0% |
| !!! | TATTTTTAATAGAAATAGGT+AGG | - | chr7_1:40249978-40249997 | None:intergenic | 15.0% |
| !!! | AGATTGATATTTTAATAAAC+AGG | - | chr7_1:40250384-40250403 | None:intergenic | 15.0% |
| !! | TTAAAAATAGTAAAGATCAT+TGG | - | chr7_1:40251498-40251517 | None:intergenic | 15.0% |
| !! | ATTGATTAGTATAAGAGTTA+AGG | + | chr7_1:40249098-40249117 | Msa1019090:intron | 20.0% |
| !! | TTGATTAGTATAAGAGTTAA+GGG | + | chr7_1:40249099-40249118 | Msa1019090:intron | 20.0% |
| !! | TTTAAACAACTTAGATTGTT+TGG | + | chr7_1:40249154-40249173 | Msa1019090:intron | 20.0% |
| !! | GTGTGATGATATATTAATAT+TGG | + | chr7_1:40249419-40249438 | Msa1019090:intron | 20.0% |
| !! | GATGATATATTAATATTGGT+TGG | + | chr7_1:40249423-40249442 | Msa1019090:intron | 20.0% |
| !!! | TACTATTATATCTTTTGAGT+CGG | + | chr7_1:40249938-40249957 | Msa1019090:intron | 20.0% |
| !! | AATAGAAAAATTACAAGGAT+AGG | - | chr7_1:40250344-40250363 | None:intergenic | 20.0% |
| !! | TTAATATACTATATCCTGTA+TGG | + | chr7_1:40250681-40250700 | Msa1019090:intron | 20.0% |
| !! | ATATATATTCTAAATGGTAC+TGG | + | chr7_1:40250851-40250870 | Msa1019090:intron | 20.0% |
| !!! | TTTAATTTTTTATTGTCCTC+CGG | + | chr7_1:40251513-40251532 | Msa1019090:three_prime_UTR | 20.0% |
| !! | TATTTCTATGAATCTGAACA+TGG | - | chr7_1:40249455-40249474 | None:intergenic | 25.0% |
| ! | CGACTAATAGAAAAATTACA+AGG | - | chr7_1:40250349-40250368 | None:intergenic | 25.0% |
| !!! | ACTTATAGACTCTTTTGAAA+TGG | + | chr7_1:40250615-40250634 | Msa1019090:intron | 25.0% |
| ! | ACAGGATATAGTATATTAAC+AGG | - | chr7_1:40250680-40250699 | None:intergenic | 25.0% |
| !!! | CTAAAATCAATTTGTTACAC+AGG | - | chr7_1:40250767-40250786 | None:intergenic | 25.0% |
| !!! | ATTGATTTTAGTCAATACTC+TGG | + | chr7_1:40250776-40250795 | Msa1019090:intron | 25.0% |
| ! | ATCAGTCCAAATTATTTCAA+TGG | - | chr7_1:40250817-40250836 | None:intergenic | 25.0% |
| !!! | TTGGTCTTGTTATTTTACAA+TGG | + | chr7_1:40251150-40251169 | Msa1019090:three_prime_UTR | 25.0% |
| ! | ATCATAAGAATCCTAATTGT+GGG | - | chr7_1:40251315-40251334 | None:intergenic | 25.0% |
| ! | AATCATAAGAATCCTAATTG+TGG | - | chr7_1:40251316-40251335 | None:intergenic | 25.0% |
| !!! | AAGTCATGATTCAGTTTTTT+CGG | - | chr7_1:40251347-40251366 | None:intergenic | 25.0% |
| ! | AAAAAACTGAATCATGACTT+GGG | + | chr7_1:40251347-40251366 | Msa1019090:three_prime_UTR | 25.0% |
| !! | ACTGTCATAGAATAGAATTT+TGG | + | chr7_1:40251389-40251408 | Msa1019090:three_prime_UTR | 25.0% |
| ! | TTGAGATTAGACTTGTAAAA+TGG | + | chr7_1:40251441-40251460 | Msa1019090:three_prime_UTR | 25.0% |
| AGCGAAGTTTATATTGTTCT+TGG | - | chr7_1:40248635-40248654 | None:intergenic | 30.0% | |
| TGAAGAAGATTGCAATATGA+AGG | + | chr7_1:40248746-40248765 | Msa1019090:exon | 30.0% | |
| AAAGAGAATTATGGTTACAG+TGG | - | chr7_1:40248779-40248798 | None:intergenic | 30.0% | |
| !!! | TGTTTTGAGAAAGTGAAATG+TGG | + | chr7_1:40249128-40249147 | Msa1019090:intron | 30.0% |
| ATAATGTTTGATGTCAGTGT+AGG | - | chr7_1:40249192-40249211 | None:intergenic | 30.0% | |
| TGGTACTAACAGGAATTTAA+AGG | + | chr7_1:40249636-40249655 | Msa1019090:intron | 30.0% | |
| !!! | GGATACGTTTTTAAAATCAC+CGG | + | chr7_1:40249657-40249676 | Msa1019090:CDS | 30.0% |
| ATCCTAAAAATTACACTGAC+AGG | - | chr7_1:40249777-40249796 | None:intergenic | 30.0% | |
| ! | AGTATATTGTTGACTGTAGA+TGG | + | chr7_1:40249813-40249832 | Msa1019090:intron | 30.0% |
| ! | TTTTCATTGTTCACATGAAC+AGG | + | chr7_1:40250037-40250056 | Msa1019090:intron | 30.0% |
| ! | AACTTGGTAATTGTGAAGAA+GGG | + | chr7_1:40250154-40250173 | Msa1019090:CDS | 30.0% |
| !! | CTTTTGTTGTAAATGTCCTA+CGG | - | chr7_1:40250309-40250328 | None:intergenic | 30.0% |
| ! | TTTTCTATTAGTCGTGTCAT+TGG | + | chr7_1:40250355-40250374 | Msa1019090:intron | 30.0% |
| TCACATAACTCATAACAGAA+GGG | - | chr7_1:40250429-40250448 | None:intergenic | 30.0% | |
| TTCACATAACTCATAACAGA+AGG | - | chr7_1:40250430-40250449 | None:intergenic | 30.0% | |
| !!! | TTTGTGCTAGTTTTGTTGAT+TGG | + | chr7_1:40250574-40250593 | Msa1019090:intron | 30.0% |
| !!! | TGTTGATTGGTTTTAGTACT+TGG | + | chr7_1:40250587-40250606 | Msa1019090:intron | 30.0% |
| TGGTGTCTATCTAACATTAA+GGG | - | chr7_1:40250645-40250664 | None:intergenic | 30.0% | |
| ! | TTGGTGTCTATCTAACATTA+AGG | - | chr7_1:40250646-40250665 | None:intergenic | 30.0% |
| ATAGCATATATATCTACTCG+TGG | - | chr7_1:40250729-40250748 | None:intergenic | 30.0% | |
| !! | TTTAGTCAATACTCTGGTTT+TGG | + | chr7_1:40250782-40250801 | Msa1019090:intron | 30.0% |
| TTCAGGCCATTGAAATAATT+TGG | + | chr7_1:40250808-40250827 | Msa1019090:intron | 30.0% | |
| !! | GTAACTAGTCTTTGTATCTT+GGG | - | chr7_1:40250911-40250930 | None:intergenic | 30.0% |
| !! | AGTAACTAGTCTTTGTATCT+TGG | - | chr7_1:40250912-40250931 | None:intergenic | 30.0% |
| AAATAACAAGACCAAAACTG+TGG | - | chr7_1:40251145-40251164 | None:intergenic | 30.0% | |
| TCTGTCATGACAAATACAAA+TGG | + | chr7_1:40251174-40251193 | Msa1019090:three_prime_UTR | 30.0% | |
| GAAAAAACTGAATCATGACT+TGG | + | chr7_1:40251346-40251365 | Msa1019090:three_prime_UTR | 30.0% | |
| TCTATTCTATGACAGTTGTA+AGG | - | chr7_1:40251385-40251404 | None:intergenic | 30.0% | |
| TAATCTCAATTTCGAGAACA+AGG | - | chr7_1:40251430-40251449 | None:intergenic | 30.0% | |
| TCACGGTAAGATGAAAACTA+GGG | - | chr7_1:40248668-40248687 | None:intergenic | 35.0% | |
| TCAACTTAACGTGTTAGTGT+CGG | - | chr7_1:40249216-40249235 | None:intergenic | 35.0% | |
| TTGATTGTAATCACATGTGC+TGG | + | chr7_1:40249266-40249285 | Msa1019090:intron | 35.0% | |
| ! | AATTTGCAGACGAGCATTTT+GGG | + | chr7_1:40249489-40249508 | Msa1019090:intron | 35.0% |
| TGTTAGTACCAGCGATATAA+TGG | - | chr7_1:40249627-40249646 | None:intergenic | 35.0% | |
| ATTATATCGCTGGTACTAAC+AGG | + | chr7_1:40249626-40249645 | Msa1019090:intron | 35.0% | |
| !!! | TACGTTTTTAAAATCACCGG+AGG | + | chr7_1:40249660-40249679 | Msa1019090:CDS | 35.0% |
| ! | AGCCTGTCAGTGTAATTTTT+AGG | + | chr7_1:40249772-40249791 | Msa1019090:intron | 35.0% |
| TTACCAAGTTCAGAACAGAA+AGG | - | chr7_1:40250144-40250163 | None:intergenic | 35.0% | |
| ! | GAACTTGGTAATTGTGAAGA+AGG | + | chr7_1:40250153-40250172 | Msa1019090:CDS | 35.0% |
| ! | TAGACAGGTTGAAAAGCTTA+CGG | - | chr7_1:40250252-40250271 | None:intergenic | 35.0% |
| ! | TAAGCTTTTCAACCTGTCTA+AGG | + | chr7_1:40250252-40250271 | Msa1019090:CDS | 35.0% |
| AGGACATTTACAACAAAAGC+TGG | + | chr7_1:40250310-40250329 | Msa1019090:CDS | 35.0% | |
| CACATAACTCATAACAGAAG+GGG | - | chr7_1:40250428-40250447 | None:intergenic | 35.0% | |
| ! | TTTCCTAGAGTTGTGTCATT+TGG | + | chr7_1:40250519-40250538 | Msa1019090:intron | 35.0% |
| AACTAGCACAAACTTTCTGA+TGG | - | chr7_1:40250566-40250585 | None:intergenic | 35.0% | |
| !!! | TACTCTGGTTTTGGTTATTC+AGG | + | chr7_1:40250791-40250810 | Msa1019090:intron | 35.0% |
| TTATTTCGTTGCAGGGAAAA+AGG | + | chr7_1:40250874-40250893 | Msa1019090:intron | 35.0% | |
| GTTTAGCAAAAAAGAGATCC+AGG | + | chr7_1:40251068-40251087 | Msa1019090:CDS | 35.0% | |
| CATTATATCCTCCCACAATT+AGG | + | chr7_1:40251301-40251320 | Msa1019090:three_prime_UTR | 35.0% | |
| ATAAGAATCCTAATTGTGGG+AGG | - | chr7_1:40251312-40251331 | None:intergenic | 35.0% | |
| !!! | TCATGATTCAGTTTTTTCGG+CGG | - | chr7_1:40251344-40251363 | None:intergenic | 35.0% |
| TTGTAAAATGGTGCGAGTAT+AGG | + | chr7_1:40251453-40251472 | Msa1019090:three_prime_UTR | 35.0% | |
| CTCACGGTAAGATGAAAACT+AGG | - | chr7_1:40248669-40248688 | None:intergenic | 40.0% | |
| ! | TGATGGACGGTGACAAATAT+TGG | + | chr7_1:40249289-40249308 | Msa1019090:intron | 40.0% |
| TGCTAGATAGTGACACATGA+GGG | + | chr7_1:40249316-40249335 | Msa1019090:intron | 40.0% | |
| ! | GAATTTGCAGACGAGCATTT+TGG | + | chr7_1:40249488-40249507 | Msa1019090:intron | 40.0% |
| AGGATTTCACAAGAGGTCAA+TGG | + | chr7_1:40249517-40249536 | Msa1019090:CDS | 40.0% | |
| GGATTTCACAAGAGGTCAAT+GGG | + | chr7_1:40249518-40249537 | Msa1019090:CDS | 40.0% | |
| GATTTCACAAGAGGTCAATG+GGG | + | chr7_1:40249519-40249538 | Msa1019090:CDS | 40.0% | |
| GACATTTGCCATTATATCGC+TGG | + | chr7_1:40249616-40249635 | Msa1019090:intron | 40.0% | |
| ACAAGGATTTCCAATGAAGC+AGG | + | chr7_1:40249692-40249711 | Msa1019090:CDS | 40.0% | |
| CAAGGATTTCCAATGAAGCA+GGG | + | chr7_1:40249693-40249712 | Msa1019090:CDS | 40.0% | |
| AGTTCAGAACAGAAAGGTCT+GGG | - | chr7_1:40250138-40250157 | None:intergenic | 40.0% | |
| AAGTTCAGAACAGAAAGGTC+TGG | - | chr7_1:40250139-40250158 | None:intergenic | 40.0% | |
| ! | AGACCTTTCTGTTCTGAACT+TGG | + | chr7_1:40250138-40250157 | Msa1019090:CDS | 40.0% |
| AAGGGTGAGAATGATTTACC+CGG | + | chr7_1:40250172-40250191 | Msa1019090:CDS | 40.0% | |
| GTTGAAAAGCTTACGGATCT+TGG | - | chr7_1:40250245-40250264 | None:intergenic | 40.0% | |
| TCACATCATCATCCTTAGAC+AGG | - | chr7_1:40250267-40250286 | None:intergenic | 40.0% | |
| ! | TGTCTAAGGATGATGATGTG+AGG | + | chr7_1:40250266-40250285 | Msa1019090:CDS | 40.0% |
| TGTTGTAAATGTCCTACGGT+AGG | - | chr7_1:40250305-40250324 | None:intergenic | 40.0% | |
| GAACCAAATGACACAACTCT+AGG | - | chr7_1:40250525-40250544 | None:intergenic | 40.0% | |
| !! | GTTGTGTCATTTGGTTCATG+TGG | + | chr7_1:40250528-40250547 | Msa1019090:intron | 40.0% |
| TTAACAGGCATGCTTCAGTT+TGG | - | chr7_1:40250665-40250684 | None:intergenic | 40.0% | |
| !! | GTACTGGTTATTTCGTTGCA+GGG | + | chr7_1:40250867-40250886 | Msa1019090:intron | 40.0% |
| !! | CTCTTTCTTTGGAGTGTAAG+AGG | - | chr7_1:40250935-40250954 | None:intergenic | 40.0% |
| CAATCCTTGCTCTCTTTCTT+TGG | - | chr7_1:40250946-40250965 | None:intergenic | 40.0% | |
| GGCGATTCTCTTCTTCTTAT+CGG | - | chr7_1:40250969-40250988 | None:intergenic | 40.0% | |
| TAAGAAGAAGAGAATCGCCA+AGG | + | chr7_1:40250970-40250989 | Msa1019090:CDS | 40.0% | |
| ! | TCATACCATCACCACAGTTT+TGG | + | chr7_1:40251131-40251150 | Msa1019090:three_prime_UTR | 40.0% |
| !!! | CATGATTCAGTTTTTTCGGC+GGG | - | chr7_1:40251343-40251362 | None:intergenic | 40.0% |
| CTCAATTTCGAGAACAAGGT+AGG | - | chr7_1:40251426-40251445 | None:intergenic | 40.0% | |
| GAATGCTGAAGACATGCTCA+CGG | - | chr7_1:40248685-40248704 | None:intergenic | 45.0% | |
| !! | TTTTTCTGGCATCCAGTGGT+GGG | - | chr7_1:40248914-40248933 | None:intergenic | 45.0% |
| !! | AAGCTTTTTCTGGCATCCAG+TGG | - | chr7_1:40248918-40248937 | None:intergenic | 45.0% |
| !! | CGTCGATCTCAAGCTTTTTC+TGG | - | chr7_1:40248928-40248947 | None:intergenic | 45.0% |
| ! | GTAATCACATGTGCTGGTGA+TGG | + | chr7_1:40249272-40249291 | Msa1019090:intron | 45.0% |
| GTGCTAGATAGTGACACATG+AGG | + | chr7_1:40249315-40249334 | Msa1019090:intron | 45.0% | |
| AGATAGTGACACATGAGGGA+CGG | + | chr7_1:40249320-40249339 | Msa1019090:intron | 45.0% | |
| CTCGTCTGCAAATTCAAGTC+AGG | - | chr7_1:40249483-40249502 | None:intergenic | 45.0% | |
| GGACAAGAGGATTTCACAAG+AGG | + | chr7_1:40249510-40249529 | Msa1019090:CDS | 45.0% | |
| ! | TCCTTGTTTGTCACAACCTC+CGG | - | chr7_1:40249679-40249698 | None:intergenic | 45.0% |
| TGTGAAGCAACAGACGAACA+CGG | - | chr7_1:40249734-40249753 | None:intergenic | 45.0% | |
| ! | TGTTCGTCTGTTGCTTCACA+GGG | + | chr7_1:40249734-40249753 | Msa1019090:CDS | 45.0% |
| ACACTGACAGGCTACACAAA+AGG | - | chr7_1:40249765-40249784 | None:intergenic | 45.0% | |
| CATCCTTGGCTTCTCAACAT+CGG | - | chr7_1:40250203-40250222 | None:intergenic | 45.0% | |
| AGTATGTCAACACCTACCGT+AGG | + | chr7_1:40250290-40250309 | Msa1019090:CDS | 45.0% | |
| TTGGTTCATGTGGCTTACCA+AGG | + | chr7_1:40250538-40250557 | Msa1019090:intron | 45.0% | |
| CAAACTTTCTGATGGCACCT+TGG | - | chr7_1:40250558-40250577 | None:intergenic | 45.0% | |
| ! | ATGTTGACTGAGCACCATAC+AGG | - | chr7_1:40250698-40250717 | None:intergenic | 45.0% |
| !! | GGTACTGGTTATTTCGTTGC+AGG | + | chr7_1:40250866-40250885 | Msa1019090:intron | 45.0% |
| CACTCCAAAGAAAGAGAGCA+AGG | + | chr7_1:40250939-40250958 | Msa1019090:CDS | 45.0% | |
| AATCGCCAAGGCAAAATCAG+AGG | + | chr7_1:40250982-40251001 | Msa1019090:CDS | 45.0% | |
| ATCCAGGATTTCCAGTGCTA+AGG | + | chr7_1:40251084-40251103 | Msa1019090:CDS | 45.0% | |
| TGATGGTATGACAGCAACCT+AGG | - | chr7_1:40251122-40251141 | None:intergenic | 45.0% | |
| CAAGACCAAAACTGTGGTGA+TGG | - | chr7_1:40251139-40251158 | None:intergenic | 45.0% | |
| AAATGGTGCGAGTATAGGTG+TGG | + | chr7_1:40251458-40251477 | Msa1019090:three_prime_UTR | 45.0% | |
| !! | ACAAAATATTAAAATTATTT+AGG | - | chr7_1:40249042-40249061 | None:intergenic | 5.0% |
| !!! | AATTTATTTTTAATAGAAAT+AGG | - | chr7_1:40249982-40250001 | None:intergenic | 5.0% |
| AATGTTGCGAATCCCACCAC+TGG | + | chr7_1:40248899-40248918 | Msa1019090:CDS | 50.0% | |
| !! | CTTTTTCTGGCATCCAGTGG+TGG | - | chr7_1:40248915-40248934 | None:intergenic | 50.0% |
| !! | TCACATGTGCTGGTGATGGA+CGG | + | chr7_1:40249276-40249295 | Msa1019090:intron | 50.0% |
| !!! | GACGAGCATTTTGGGACAAG+AGG | + | chr7_1:40249497-40249516 | Msa1019090:intron | 50.0% |
| ACCGGAGGTTGTGACAAACA+AGG | + | chr7_1:40249675-40249694 | Msa1019090:CDS | 50.0% | |
| GTTAGGACTCCCTGCTTCAT+TGG | - | chr7_1:40249705-40249724 | None:intergenic | 50.0% | |
| ! | GTGTTCGTCTGTTGCTTCAC+AGG | + | chr7_1:40249733-40249752 | Msa1019090:CDS | 50.0% |
| ! | GTTCGTCTGTTGCTTCACAG+GGG | + | chr7_1:40249735-40249754 | Msa1019090:CDS | 50.0% |
| ACAGGAACTCCTTGCTTTCG+TGG | + | chr7_1:40250055-40250074 | Msa1019090:intron | 50.0% | |
| CAGGAACTCCTTGCTTTCGT+GGG | + | chr7_1:40250056-40250075 | Msa1019090:intron | 50.0% | |
| TTGGCTTCTCAACATCGGTC+AGG | - | chr7_1:40250198-40250217 | None:intergenic | 50.0% | |
| TGACCGATGTTGAGAAGCCA+AGG | + | chr7_1:40250197-40250216 | Msa1019090:CDS | 50.0% | |
| GTTGAGAAGCCAAGGATGAG+AGG | + | chr7_1:40250205-40250224 | Msa1019090:CDS | 50.0% | |
| CTCTTAGGACCTCTCATCCT+TGG | - | chr7_1:40250217-40250236 | None:intergenic | 50.0% | |
| ! | AGCTGCCTCTGATTTTGCCT+TGG | - | chr7_1:40250990-40251009 | None:intergenic | 50.0% |
| ACCAGAAGCTTCTTGCTTCC+AGG | + | chr7_1:40251014-40251033 | Msa1019090:CDS | 50.0% | |
| ACCTGGAAGCAAGAAGCTTC+TGG | - | chr7_1:40251018-40251037 | None:intergenic | 50.0% | |
| ! | GCTTCTTGCTTCCAGGTTGA+AGG | + | chr7_1:40251021-40251040 | Msa1019090:CDS | 50.0% |
| ! | TGCCTTAGCACTGGAAATCC+TGG | - | chr7_1:40251089-40251108 | None:intergenic | 50.0% |
| TGGTATGACAGCAACCTAGG+CGG | - | chr7_1:40251119-40251138 | None:intergenic | 50.0% | |
| GAGGTCAATGGGGATGCTCT+TGG | + | chr7_1:40249529-40249548 | Msa1019090:CDS | 55.0% | |
| CAATGGGGATGCTCTTGGTG+AGG | + | chr7_1:40249534-40249553 | Msa1019090:CDS | 55.0% | |
| ACTCCTTGCTTTCGTGGGCA+TGG | + | chr7_1:40250061-40250080 | Msa1019090:CDS | 55.0% | |
| CTTCCATGCCCACGAAAGCA+AGG | - | chr7_1:40250067-40250086 | None:intergenic | 55.0% | |
| CTTGCTTTCGTGGGCATGGA+AGG | + | chr7_1:40250065-40250084 | Msa1019090:CDS | 55.0% | |
| GCTGACAATGCACCCACGAA+CGG | - | chr7_1:40250116-40250135 | None:intergenic | 55.0% | |
| TTCTCAACATCGGTCAGGCC+GGG | - | chr7_1:40250193-40250212 | None:intergenic | 55.0% | |
| CTTCTCAACATCGGTCAGGC+CGG | - | chr7_1:40250194-40250213 | None:intergenic | 55.0% | |
| CGGATCTTGGACGCTCTCTT+AGG | - | chr7_1:40250232-40250251 | None:intergenic | 55.0% | |
| CTCTCTCTGCTCCTTCAACC+TGG | - | chr7_1:40251035-40251054 | None:intergenic | 55.0% | |
| CTCTCCGTTACACTCCGACG+CGG | + | chr7_1:40248711-40248730 | Msa1019090:five_prime_UTR | 60.0% | |
| CAACTCAACAACCGCCGCGT+CGG | - | chr7_1:40248728-40248747 | None:intergenic | 60.0% | |
| AAGCAGGGAGTCCTAACCCC+TGG | + | chr7_1:40249708-40249727 | Msa1019090:CDS | 60.0% | |
| CAACAGACGAACACGGCCAG+GGG | - | chr7_1:40249727-40249746 | None:intergenic | 60.0% | |
| GCAACAGACGAACACGGCCA+GGG | - | chr7_1:40249728-40249747 | None:intergenic | 60.0% | |
| AGCAACAGACGAACACGGCC+AGG | - | chr7_1:40249729-40249748 | None:intergenic | 60.0% | |
| ! | CGTGGGCATGGAAGGCGTAA+TGG | + | chr7_1:40250073-40250092 | Msa1019090:CDS | 60.0% |
| ! | GAAGGCGTAATGGAGAGCGC+AGG | + | chr7_1:40250083-40250102 | Msa1019090:CDS | 60.0% |
| GCAGGAGGAAGTCCGTTCGT+GGG | + | chr7_1:40250101-40250120 | Msa1019090:CDS | 60.0% | |
| GGTGACAGCTGCCTTAGCAC+TGG | - | chr7_1:40251098-40251117 | None:intergenic | 60.0% | |
| TAAGGCAGCTGTCACCGCCT+AGG | + | chr7_1:40251102-40251121 | Msa1019090:CDS | 60.0% | |
| TCCGTTACACTCCGACGCGG+CGG | + | chr7_1:40248714-40248733 | Msa1019090:five_prime_UTR | 65.0% | |
| ACCGCCGCGTCGGAGTGTAA+CGG | - | chr7_1:40248718-40248737 | None:intergenic | 65.0% | |
| GACGAACACGGCCAGGGGTT+AGG | - | chr7_1:40249722-40249741 | None:intergenic | 65.0% | |
| ! | GGCGTAATGGAGAGCGCAGG+AGG | + | chr7_1:40250086-40250105 | Msa1019090:CDS | 65.0% |
| CGCAGGAGGAAGTCCGTTCG+TGG | + | chr7_1:40250100-40250119 | Msa1019090:CDS | 65.0% |
| Chromosome | Type | Strat | End | Strand | Name |
|---|---|---|---|---|---|
| chr7_1 | gene | 40248621 | 40251547 | 40248621 | ID=Msa1019090;Name=Msa1019090 |
| chr7_1 | mRNA | 40248621 | 40251547 | 40248621 | ID=Msa1019090-mRNA-1;Parent=Msa1019090;Name=Msa1019090-mRNA-1;_AED=0.01;_eAED=0.01;_QI=141|1|1|1|1|1|6|424|248 |
| chr7_1 | exon | 40248621 | 40248767 | 40248621 | ID=Msa1019090-mRNA-1:exon:7764;Parent=Msa1019090-mRNA-1 |
| chr7_1 | exon | 40248896 | 40248960 | 40248896 | ID=Msa1019090-mRNA-1:exon:7765;Parent=Msa1019090-mRNA-1 |
| chr7_1 | exon | 40249498 | 40249555 | 40249498 | ID=Msa1019090-mRNA-1:exon:7766;Parent=Msa1019090-mRNA-1 |
| chr7_1 | exon | 40249648 | 40249756 | 40249648 | ID=Msa1019090-mRNA-1:exon:7767;Parent=Msa1019090-mRNA-1 |
| chr7_1 | exon | 40250059 | 40250331 | 40250059 | ID=Msa1019090-mRNA-1:exon:7768;Parent=Msa1019090-mRNA-1 |
| chr7_1 | exon | 40250888 | 40251547 | 40250888 | ID=Msa1019090-mRNA-1:exon:7769;Parent=Msa1019090-mRNA-1 |
| chr7_1 | five_prime_UTR | 40248621 | 40248761 | 40248621 | ID=Msa1019090-mRNA-1:five_prime_utr;Parent=Msa1019090-mRNA-1 |
| chr7_1 | CDS | 40248762 | 40248767 | 40248762 | ID=Msa1019090-mRNA-1:cds;Parent=Msa1019090-mRNA-1 |
| chr7_1 | CDS | 40248896 | 40248960 | 40248896 | ID=Msa1019090-mRNA-1:cds;Parent=Msa1019090-mRNA-1 |
| chr7_1 | CDS | 40249498 | 40249555 | 40249498 | ID=Msa1019090-mRNA-1:cds;Parent=Msa1019090-mRNA-1 |
| chr7_1 | CDS | 40249648 | 40249756 | 40249648 | ID=Msa1019090-mRNA-1:cds;Parent=Msa1019090-mRNA-1 |
| chr7_1 | CDS | 40250059 | 40250331 | 40250059 | ID=Msa1019090-mRNA-1:cds;Parent=Msa1019090-mRNA-1 |
| chr7_1 | CDS | 40250888 | 40251123 | 40250888 | ID=Msa1019090-mRNA-1:cds;Parent=Msa1019090-mRNA-1 |
| chr7_1 | three_prime_UTR | 40251124 | 40251547 | 40251124 | ID=Msa1019090-mRNA-1:three_prime_utr;Parent=Msa1019090-mRNA-1 |
| Gene Sequence |
| Protein sequence |
