Alfalfa Gene Editing Database
Alfalfa Gene Editing Database
| Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa1115850 | XP_003625199.1 | 75.862 | 319 | 20 | 4 | 1 | 262 | 1 | 319 | 5.22e-164 | 467 |
| Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa1115850 | sp|Q66GR3|BH130_ARATH | 69.474 | 95 | 29 | 0 | 168 | 262 | 261 | 355 | 1.16e-38 | 141 |
| Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa1115850 | G7KUF7 | 75.862 | 319 | 20 | 4 | 1 | 262 | 1 | 319 | 2.49e-164 | 467 |
| Gene ID | Type | Classification |
|---|---|---|
| Msa1115850 | TF | bHLH |
| Gene ID | Type | Classification |
|---|
Co-expression Network
| Gene1 | Gene2 | correlation coefficient | p_value | FDR |
|---|---|---|---|---|
| Msa0073110 | Msa1115850 | 0.800312 | 1.529197e-48 | -8.615850e-47 |
| Msa0101530 | Msa1115850 | 0.811811 | 5.809354e-51 | -8.615850e-47 |
| Msa0603300 | Msa1115850 | 0.804797 | 1.817840e-49 | -8.615850e-47 |
| Msa0603310 | Msa1115850 | 0.814630 | 1.396978e-51 | -8.615850e-47 |
| Msa0606600 | Msa1115850 | 0.807046 | 6.120136e-50 | -8.615850e-47 |
| Msa0647300 | Msa1115850 | 0.808075 | 3.701789e-50 | -8.615850e-47 |
| Msa0679220 | Msa1115850 | 0.811010 | 8.669768e-51 | -8.615850e-47 |
| Msa0682110 | Msa1115850 | 0.806637 | 7.466014e-50 | -8.615850e-47 |
| Msa0686830 | Msa1115850 | 0.812522 | 4.063315e-51 | -8.615850e-47 |
| Msa0736560 | Msa1115850 | 0.802128 | 6.499208e-49 | -8.615850e-47 |
| Msa0744710 | Msa1115850 | 0.815636 | 8.354264e-52 | -8.615850e-47 |
| Msa0799120 | Msa1115850 | 0.804822 | 1.796071e-49 | -8.615850e-47 |
| Msa0826240 | Msa1115850 | 0.814668 | 1.370462e-51 | -8.615850e-47 |
| Msa0838210 | Msa1115850 | 0.809111 | 2.223528e-50 | -8.615850e-47 |
| Msa1001120 | Msa1115850 | 0.811294 | 7.522574e-51 | -8.615850e-47 |
| Msa1027340 | Msa1115850 | 0.801962 | 7.028114e-49 | -8.615850e-47 |
| Msa1027400 | Msa1115850 | 0.807028 | 6.173372e-50 | -8.615850e-47 |
| Msa1034950 | Msa1115850 | 0.922808 | 6.067544e-89 | -8.615850e-47 |
| Msa1075010 | Msa1115850 | 0.921837 | 2.140454e-88 | -8.615850e-47 |
| Msa1075090 | Msa1115850 | 0.808432 | 3.106924e-50 | -8.615850e-47 |
| Msa1077970 | Msa1115850 | 0.824454 | 8.000964e-54 | -8.615850e-47 |
| Msa1100330 | Msa1115850 | 0.800834 | 1.196882e-48 | -8.615850e-47 |
| Msa0242720 | Msa1115850 | 0.827735 | 1.327844e-54 | -8.615850e-47 |
| Msa0258740 | Msa1115850 | 0.825728 | 4.000945e-54 | -8.615850e-47 |
| Msa0265650 | Msa1115850 | 0.819584 | 1.075488e-52 | -8.615850e-47 |
| Msa0294200 | Msa1115850 | 0.807908 | 4.017302e-50 | -8.615850e-47 |
| Msa0298000 | Msa1115850 | 0.822510 | 2.278726e-53 | -8.615850e-47 |
| Msa0303900 | Msa1115850 | 0.824685 | 7.059819e-54 | -8.615850e-47 |
| Msa0320170 | Msa1115850 | 0.825677 | 4.114995e-54 | -8.615850e-47 |
| Msa0333770 | Msa1115850 | 0.823441 | 1.382857e-53 | -8.615850e-47 |
| Msa1115850 | Msa1115980 | 0.833765 | 4.420188e-56 | -8.615850e-47 |
| Msa1115850 | Msa1154570 | 0.806999 | 6.260408e-50 | -8.615850e-47 |
| Msa1115850 | Msa1202110 | 0.807649 | 4.558708e-50 | -8.615850e-47 |
| Msa1115850 | Msa1254870 | 0.807151 | 5.813561e-50 | -8.615850e-47 |
| Msa1115850 | Msa1263110 | 0.805094 | 1.575791e-49 | -8.615850e-47 |
| Msa1115850 | Msa1269200 | 0.803060 | 4.174386e-49 | -8.615850e-47 |
| Msa1115850 | Msa1322500 | 0.814599 | 1.419610e-51 | -8.615850e-47 |
| Msa1115850 | Msa1328430 | 0.805502 | 1.294066e-49 | -8.615850e-47 |
| Msa1115850 | Msa1359590 | 0.806216 | 9.160299e-50 | -8.615850e-47 |
| Msa1115850 | Msa1403660 | 0.811636 | 6.341323e-51 | -8.615850e-47 |
| Msa1115850 | Msa1459920 | 0.801899 | 7.242169e-49 | -8.615850e-47 |
| Msa0490100 | Msa1115850 | 0.828641 | 8.031457e-55 | -8.615850e-47 |
| Msa0491960 | Msa1115850 | 0.813020 | 3.161504e-51 | -8.615850e-47 |
| Msa0501080 | Msa1115850 | 0.810557 | 1.086210e-50 | -8.615850e-47 |
| Msa0588040 | Msa1115850 | 0.809525 | 1.812915e-50 | -8.615850e-47 |
| Msa0901270 | Msa1115850 | 0.808310 | 3.297601e-50 | -8.615850e-47 |
| Msa0956600 | Msa1115850 | -0.801760 | 7.732848e-49 | -8.615850e-47 |
PPI
| Gene1 | Gene2 | Type |
|---|
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa1115850 | MtrunA17_Chr7g0258181 | 75.862 | 319 | 20 | 4 | 1 | 262 | 1 | 319 | 4.80e-168 | 467 |
| Msa1115850 | MtrunA17_Chr1g0174271 | 39.353 | 371 | 103 | 11 | 4 | 258 | 6 | 370 | 6.52e-58 | 189 |
| Msa1115850 | MtrunA17_Chr4g0032951 | 38.783 | 263 | 95 | 7 | 61 | 262 | 174 | 431 | 2.59e-42 | 149 |
| Msa1115850 | MtrunA17_Chr2g0329041 | 40.000 | 255 | 94 | 8 | 63 | 262 | 157 | 407 | 2.77e-39 | 141 |
| Msa1115850 | MtrunA17_Chr4g0014771 | 69.620 | 79 | 24 | 0 | 180 | 258 | 112 | 190 | 6.27e-34 | 121 |
| Msa1115850 | MtrunA17_Chr3g0087771 | 61.538 | 91 | 35 | 0 | 168 | 258 | 304 | 394 | 2.19e-33 | 125 |
| Msa1115850 | MtrunA17_Chr8g0351881 | 60.440 | 91 | 36 | 0 | 168 | 258 | 298 | 388 | 1.24e-32 | 123 |
| Msa1115850 | MtrunA17_Chr1g0213791 | 56.522 | 92 | 38 | 1 | 171 | 262 | 252 | 341 | 1.63e-27 | 108 |
| Msa1115850 | MtrunA17_Chr4g0074161 | 54.412 | 68 | 30 | 1 | 186 | 253 | 206 | 272 | 3.69e-16 | 77.4 |
| Msa1115850 | MtrunA17_Chr1g0152131 | 52.113 | 71 | 34 | 0 | 186 | 256 | 260 | 330 | 3.71e-16 | 77.4 |
| Msa1115850 | MtrunA17_Chr1g0190731 | 50.667 | 75 | 36 | 1 | 179 | 253 | 186 | 259 | 8.67e-16 | 75.9 |
| Msa1115850 | MtrunA17_Chr5g0421111 | 50.000 | 74 | 37 | 0 | 186 | 259 | 365 | 438 | 1.57e-15 | 75.9 |
| Msa1115850 | MtrunA17_Chr3g0131771 | 53.731 | 67 | 31 | 0 | 186 | 252 | 147 | 213 | 2.65e-15 | 74.3 |
| Msa1115850 | MtrunA17_Chr7g0234761 | 48.649 | 74 | 38 | 0 | 186 | 259 | 317 | 390 | 3.91e-15 | 74.7 |
| Msa1115850 | MtrunA17_Chr3g0144641 | 50.000 | 74 | 37 | 0 | 186 | 259 | 191 | 264 | 7.84e-15 | 73.6 |
| Msa1115850 | MtrunA17_Chr8g0365941 | 50.725 | 69 | 34 | 0 | 186 | 254 | 305 | 373 | 1.57e-14 | 72.8 |
| Msa1115850 | MtrunA17_Chr8g0339091 | 45.946 | 74 | 40 | 0 | 186 | 259 | 291 | 364 | 1.99e-14 | 72.8 |
| Msa1115850 | MtrunA17_Chr4g0035101 | 45.679 | 81 | 42 | 1 | 179 | 259 | 138 | 216 | 6.81e-14 | 70.5 |
| Msa1115850 | MtrunA17_Chr8g0385911 | 49.275 | 69 | 35 | 0 | 186 | 254 | 145 | 213 | 8.36e-14 | 70.1 |
| Msa1115850 | MtrunA17_Chr8g0363921 | 47.761 | 67 | 35 | 0 | 186 | 252 | 151 | 217 | 5.42e-13 | 67.4 |
| Msa1115850 | MtrunA17_Chr7g0258161 | 41.892 | 74 | 43 | 0 | 186 | 259 | 173 | 246 | 8.52e-12 | 64.3 |
| Msa1115850 | MtrunA17_Chr5g0415291 | 46.269 | 67 | 36 | 0 | 186 | 252 | 112 | 178 | 9.44e-12 | 63.2 |
| Msa1115850 | MtrunA17_Chr1g0152651 | 53.846 | 65 | 29 | 1 | 187 | 251 | 275 | 338 | 2.48e-11 | 63.2 |
| Msa1115850 | MtrunA17_Chr6g0484271 | 44.776 | 67 | 37 | 0 | 186 | 252 | 155 | 221 | 3.01e-11 | 62.4 |
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa1115850 | AT2G42280.1 | 69.474 | 95 | 29 | 0 | 168 | 262 | 261 | 355 | 1.18e-39 | 141 |
| Msa1115850 | AT1G51140.1 | 67.816 | 87 | 26 | 1 | 172 | 258 | 292 | 376 | 4.01e-35 | 129 |
| Msa1115850 | AT2G42280.3 | 74.074 | 81 | 21 | 0 | 168 | 248 | 261 | 341 | 1.07e-33 | 125 |
| Msa1115850 | AT2G43140.1 | 60.870 | 92 | 35 | 1 | 168 | 258 | 115 | 206 | 1.29e-32 | 119 |
| Msa1115850 | AT1G35460.1 | 61.176 | 85 | 33 | 0 | 178 | 262 | 173 | 257 | 1.36e-32 | 120 |
| Msa1115850 | AT2G43140.2 | 60.870 | 92 | 35 | 1 | 168 | 258 | 212 | 303 | 3.61e-32 | 120 |
| Msa1115850 | AT4G09180.1 | 59.341 | 91 | 35 | 1 | 172 | 262 | 172 | 260 | 2.30e-30 | 114 |
| Msa1115850 | AT1G05805.1 | 59.341 | 91 | 36 | 1 | 169 | 258 | 265 | 355 | 3.19e-30 | 116 |
| Msa1115850 | AT1G35460.2 | 76.596 | 47 | 11 | 0 | 178 | 224 | 173 | 219 | 2.55e-18 | 81.6 |
| Msa1115850 | AT2G24260.2 | 51.282 | 78 | 37 | 1 | 176 | 253 | 25 | 101 | 1.61e-16 | 77.0 |
| Msa1115850 | AT5G58010.1 | 54.412 | 68 | 30 | 1 | 186 | 253 | 99 | 165 | 3.59e-16 | 77.0 |
| Msa1115850 | AT2G24260.1 | 51.282 | 78 | 37 | 1 | 176 | 253 | 128 | 204 | 4.49e-16 | 77.4 |
| Msa1115850 | AT4G30980.1 | 54.412 | 68 | 30 | 1 | 186 | 253 | 130 | 196 | 1.42e-15 | 75.5 |
| Msa1115850 | AT4G30980.2 | 54.412 | 68 | 30 | 1 | 186 | 253 | 178 | 244 | 1.79e-15 | 75.5 |
| Msa1115850 | AT1G10120.2 | 52.113 | 71 | 34 | 0 | 186 | 256 | 206 | 276 | 3.78e-15 | 74.7 |
| Msa1115850 | AT1G10120.1 | 52.113 | 71 | 34 | 0 | 186 | 256 | 206 | 276 | 3.78e-15 | 74.7 |
| Msa1115850 | AT4G34530.1 | 48.649 | 74 | 38 | 0 | 186 | 259 | 172 | 245 | 4.83e-15 | 74.3 |
| Msa1115850 | AT1G68920.3 | 49.296 | 71 | 36 | 0 | 186 | 256 | 302 | 372 | 7.62e-15 | 74.3 |
| Msa1115850 | AT1G68920.1 | 49.296 | 71 | 36 | 0 | 186 | 256 | 303 | 373 | 8.15e-15 | 74.3 |
| Msa1115850 | AT1G68920.4 | 49.296 | 71 | 36 | 0 | 186 | 256 | 303 | 373 | 8.15e-15 | 74.3 |
| Msa1115850 | AT1G68920.2 | 49.296 | 71 | 36 | 0 | 186 | 256 | 303 | 373 | 8.15e-15 | 74.3 |
| Msa1115850 | AT5G50915.3 | 53.731 | 67 | 31 | 0 | 186 | 252 | 136 | 202 | 8.81e-15 | 72.8 |
| Msa1115850 | AT5G50915.4 | 53.731 | 67 | 31 | 0 | 186 | 252 | 136 | 202 | 8.81e-15 | 72.8 |
| Msa1115850 | AT5G50915.1 | 53.731 | 67 | 31 | 0 | 186 | 252 | 136 | 202 | 8.82e-15 | 72.8 |
| Msa1115850 | AT5G50915.2 | 53.731 | 67 | 31 | 0 | 186 | 252 | 136 | 202 | 8.82e-15 | 72.8 |
| Msa1115850 | AT3G07340.1 | 47.297 | 74 | 39 | 0 | 186 | 259 | 258 | 331 | 2.63e-14 | 72.4 |
| Msa1115850 | AT3G07340.2 | 47.297 | 74 | 39 | 0 | 186 | 259 | 258 | 331 | 3.04e-14 | 72.4 |
| Msa1115850 | AT1G26260.4 | 52.239 | 67 | 32 | 0 | 186 | 252 | 223 | 289 | 4.12e-14 | 71.6 |
| Msa1115850 | AT1G26260.1 | 52.239 | 67 | 32 | 0 | 186 | 252 | 223 | 289 | 4.12e-14 | 71.6 |
| Msa1115850 | AT1G26260.6 | 52.239 | 67 | 32 | 0 | 186 | 252 | 223 | 289 | 4.12e-14 | 71.6 |
| Msa1115850 | AT1G26260.2 | 52.239 | 67 | 32 | 0 | 186 | 252 | 223 | 289 | 4.12e-14 | 71.6 |
| Msa1115850 | AT1G26260.5 | 52.239 | 67 | 32 | 0 | 186 | 252 | 201 | 267 | 4.16e-14 | 71.6 |
| Msa1115850 | AT1G26260.3 | 52.239 | 67 | 32 | 0 | 186 | 252 | 172 | 238 | 5.05e-14 | 71.2 |
| Msa1115850 | AT1G25330.1 | 47.761 | 67 | 35 | 0 | 186 | 252 | 104 | 170 | 8.03e-14 | 69.3 |
| Msa1115850 | AT5G48560.1 | 49.254 | 67 | 34 | 0 | 186 | 252 | 301 | 367 | 2.29e-13 | 69.7 |
| Msa1115850 | AT5G48560.2 | 49.254 | 67 | 34 | 0 | 186 | 252 | 301 | 367 | 2.35e-13 | 69.7 |
| Msa1115850 | AT3G23690.1 | 45.946 | 74 | 40 | 0 | 186 | 259 | 191 | 264 | 2.97e-13 | 69.3 |
| Msa1115850 | AT4G36540.2 | 44.156 | 77 | 41 | 1 | 176 | 252 | 133 | 207 | 4.93e-13 | 68.2 |
| Msa1115850 | AT4G36540.1 | 44.156 | 77 | 41 | 1 | 176 | 252 | 133 | 207 | 5.05e-13 | 68.2 |
| Msa1115850 | AT1G18400.2 | 47.761 | 67 | 35 | 0 | 186 | 252 | 145 | 211 | 1.76e-12 | 65.9 |
| Msa1115850 | AT1G59640.1 | 47.761 | 67 | 35 | 0 | 186 | 252 | 136 | 202 | 2.38e-12 | 65.9 |
| Msa1115850 | AT3G57800.2 | 43.243 | 74 | 42 | 0 | 186 | 259 | 204 | 277 | 2.82e-12 | 66.2 |
| Msa1115850 | AT2G18300.2 | 46.377 | 69 | 37 | 0 | 186 | 254 | 185 | 253 | 2.84e-12 | 66.2 |
| Msa1115850 | AT1G18400.1 | 47.761 | 67 | 35 | 0 | 186 | 252 | 145 | 211 | 2.86e-12 | 65.5 |
| Msa1115850 | AT2G18300.1 | 46.377 | 69 | 37 | 0 | 186 | 254 | 185 | 253 | 2.92e-12 | 66.2 |
| Msa1115850 | AT2G42300.1 | 43.243 | 74 | 42 | 0 | 186 | 259 | 185 | 258 | 2.94e-12 | 65.9 |
| Msa1115850 | AT2G18300.3 | 46.377 | 69 | 37 | 0 | 186 | 254 | 185 | 253 | 3.55e-12 | 65.9 |
| Msa1115850 | AT1G73830.2 | 44.776 | 67 | 37 | 0 | 186 | 252 | 147 | 213 | 3.98e-12 | 65.1 |
| Msa1115850 | AT1G73830.1 | 44.776 | 67 | 37 | 0 | 186 | 252 | 147 | 213 | 4.38e-12 | 65.1 |
| Msa1115850 | AT2G42300.4 | 43.243 | 74 | 42 | 0 | 186 | 259 | 185 | 258 | 4.90e-12 | 65.1 |
| Msa1115850 | AT1G59640.2 | 47.761 | 67 | 35 | 0 | 186 | 252 | 136 | 202 | 7.72e-12 | 65.1 |
| Msa1115850 | AT5G62610.2 | 44.776 | 67 | 37 | 0 | 186 | 252 | 153 | 219 | 2.18e-11 | 63.2 |
| Msa1115850 | AT5G62610.1 | 44.776 | 67 | 37 | 0 | 186 | 252 | 153 | 219 | 2.18e-11 | 63.2 |
| Msa1115850 | AT2G14760.1 | 53.846 | 65 | 29 | 1 | 187 | 251 | 238 | 301 | 3.15e-11 | 63.2 |
Find 50 sgRNAs with CRISPR-Local
Find 200 sgRNAs with CRISPR-GE
CRISPR-Local
| sgRNA_sequence | on_target_score | Position | Region |
|---|---|---|---|
| AAACGAAGCAACCTTGAATT+TGG | 0.214893 | 7_3:-63385486 | None:intergenic |
| CTCAAGGAAGAAGGACTTCT+TGG | 0.270896 | 7_3:-63386660 | None:intergenic |
| AACATATTGAACAATCAAAT+TGG | 0.290694 | 7_3:+63386630 | Msa1115850:CDS |
| ACCCTTTCGGCAAGGCTTCT+AGG | 0.305032 | 7_3:-63387056 | None:intergenic |
| CCGAGTTCTTCTTACCCTTT+CGG | 0.326997 | 7_3:-63387069 | None:intergenic |
| ATGCTGCTCGGAACAGAATC+TGG | 0.330247 | 7_3:-63387005 | None:intergenic |
| AATGTTTATTGTGGAGAATT+TGG | 0.338878 | 7_3:+63386974 | Msa1115850:CDS |
| AATGAGGATGCTCAATATTA+TGG | 0.342968 | 7_3:+63386762 | Msa1115850:CDS |
| ATTCTGACCTTATCAATGTT+TGG | 0.345820 | 7_3:-63387128 | None:intergenic |
| GAAGGTTGTGCTACAAATTC+TGG | 0.353997 | 7_3:+63385531 | Msa1115850:CDS |
| AACAACAACATCATCTCCTT+TGG | 0.393746 | 7_3:+63385750 | Msa1115850:CDS |
| TCCTAGAAGCCTTGCCGAAA+GGG | 0.399735 | 7_3:+63387055 | Msa1115850:CDS |
| AACATCATCTCCTTTGGAAA+TGG | 0.414195 | 7_3:+63385756 | Msa1115850:CDS |
| CTCTTTGCTCTGATGCTGCT+CGG | 0.438402 | 7_3:-63387017 | None:intergenic |
| ACCACTCTGTCTTAAAAGAT+TGG | 0.442108 | 7_3:-63385706 | None:intergenic |
| AACAAAACCAACCAAATTCA+AGG | 0.457834 | 7_3:+63385475 | Msa1115850:CDS |
| AAAGGAGATGATGTTGTTGT+TGG | 0.459546 | 7_3:-63385748 | None:intergenic |
| TCGGAACAGAATCTGGAAAC+TGG | 0.461159 | 7_3:-63386998 | None:intergenic |
| GGTTGTTCCAAACATTGATA+AGG | 0.462084 | 7_3:+63387121 | Msa1115850:CDS |
| AGACAGAGTGGTTCCCATGC+TGG | 0.479729 | 7_3:+63385717 | Msa1115850:CDS |
| AAAGGTGTTGAAAACTATGA+TGG | 0.487777 | 7_3:+63386570 | Msa1115850:CDS |
| CACATCAGAAATGTTAGACT+TGG | 0.499859 | 7_3:+63387247 | Msa1115850:CDS |
| AAGACACATGAATTCTCAGC+AGG | 0.502231 | 7_3:+63385650 | Msa1115850:CDS |
| TTCTCAGCAGGGTTATAGAA+TGG | 0.503073 | 7_3:+63385662 | Msa1115850:CDS |
| ATCATCAGAAATGTTTATTG+TGG | 0.507405 | 7_3:+63386965 | Msa1115850:intron |
| GAAGCAACCTTGAATTTGGT+TGG | 0.517186 | 7_3:-63385482 | None:intergenic |
| GATAACATTCTCAAGGAAGA+AGG | 0.538937 | 7_3:-63386669 | None:intergenic |
| ATCCTAGAAGCCTTGCCGAA+AGG | 0.543719 | 7_3:+63387054 | Msa1115850:CDS |
| AACTCTAAAACGAGGAGTGA+TGG | 0.547308 | 7_3:+63386696 | Msa1115850:CDS |
| TTCTTCTTACCCTTTCGGCA+AGG | 0.550067 | 7_3:-63387064 | None:intergenic |
| TCAAGTTTCAAACAAGCTGA+AGG | 0.555684 | 7_3:+63385513 | Msa1115850:CDS |
| CCGAAAGGGTAAGAAGAACT+CGG | 0.565752 | 7_3:+63387069 | Msa1115850:CDS |
| CTCCTTGTCTTCGATCATCA+CGG | 0.577461 | 7_3:-63386734 | None:intergenic |
| AAAACGAGGAGTGATGGCAT+TGG | 0.578334 | 7_3:+63386702 | Msa1115850:CDS |
| GCAGGGTATGAATCTATGAA+AGG | 0.606763 | 7_3:+63386552 | Msa1115850:intron |
| AAGGTGTTGAAAACTATGAT+GGG | 0.612325 | 7_3:+63386571 | Msa1115850:CDS |
| GTTATGTGATAACATTCTCA+AGG | 0.612399 | 7_3:-63386676 | None:intergenic |
| TACTACAATACCATTTCCAA+AGG | 0.613692 | 7_3:-63385766 | None:intergenic |
| AGCAGCATCAGAGCAAAGAG+AGG | 0.624459 | 7_3:+63387020 | Msa1115850:CDS |
| ACGAATGAGAAAATTGCAAG+AGG | 0.630200 | 7_3:+63387100 | Msa1115850:CDS |
| TATAGAATGGATCAACACAA+AGG | 0.657311 | 7_3:+63385675 | Msa1115850:CDS |
| AGCCGTGATGATCGAAGACA+AGG | 0.662100 | 7_3:+63386732 | Msa1115850:CDS |
| GTTGGAGAAATGACCAGCAT+GGG | 0.675608 | 7_3:-63385730 | None:intergenic |
| TGTTGGAGAAATGACCAGCA+TGG | 0.677077 | 7_3:-63385731 | None:intergenic |
| CGTGATGATCGAAGACAAGG+AGG | 0.691311 | 7_3:+63386735 | Msa1115850:CDS |
| AGACACATGAATTCTCAGCA+GGG | 0.696388 | 7_3:+63385651 | Msa1115850:CDS |
| GATGGGGTGAATGACAGTGA+TGG | 0.701721 | 7_3:+63386588 | Msa1115850:CDS |
| AAGACAAGGAGGTAGCAATG+AGG | 0.720936 | 7_3:+63386746 | Msa1115850:CDS |
| AGGTGTTGAAAACTATGATG+GGG | 0.756832 | 7_3:+63386572 | Msa1115850:CDS |
| TATCACATAACTCTAAAACG+AGG | 0.781502 | 7_3:+63386688 | Msa1115850:CDS |
CRISPR-GE
| badsite warning | sgRNA_sequence | Strand | Position | Region | GC_content |
|---|---|---|---|---|---|
| !!! | ATTAAATCATAACTTTTTTT+AGG | + | chr7_3:63386072-63386091 | Msa1115850:intron | 10.0% |
| !!! | GTTAACTTTTTTTTTTTATT+AGG | + | chr7_3:63386827-63386846 | Msa1115850:intron | 10.0% |
| !!! | ATTAAATCATAACTTTTTTT+AGG | + | chr7_3:63386072-63386091 | Msa1115850:intron | 10.0% |
| !!! | GTTAACTTTTTTTTTTTATT+AGG | + | chr7_3:63386827-63386846 | Msa1115850:intron | 10.0% |
| !! | AAAAAAGTTATTTATGTACA+AGG | + | chr7_3:63386310-63386329 | Msa1115850:intron | 15.0% |
| !! | AAAAAGTTATTTATGTACAA+GGG | + | chr7_3:63386311-63386330 | Msa1115850:intron | 15.0% |
| !! | AAAACATAATTGTCTTAAAA+GGG | - | chr7_3:63387182-63387201 | None:intergenic | 15.0% |
| !! | AAAAACATAATTGTCTTAAA+AGG | - | chr7_3:63387183-63387202 | None:intergenic | 15.0% |
| !!! | AGTTAAACATTGTTTAATTT+TGG | + | chr7_3:63387213-63387232 | Msa1115850:intron | 15.0% |
| !! | ATTAAAATATATATTAGTGC+AGG | - | chr7_3:63387351-63387370 | None:intergenic | 15.0% |
| !! | AAAAAAGTTATTTATGTACA+AGG | + | chr7_3:63386310-63386329 | Msa1115850:intron | 15.0% |
| !! | AAAAAGTTATTTATGTACAA+GGG | + | chr7_3:63386311-63386330 | Msa1115850:intron | 15.0% |
| !! | AAAACATAATTGTCTTAAAA+GGG | - | chr7_3:63387182-63387201 | None:intergenic | 15.0% |
| !! | AAAAACATAATTGTCTTAAA+AGG | - | chr7_3:63387183-63387202 | None:intergenic | 15.0% |
| !!! | AGTTAAACATTGTTTAATTT+TGG | + | chr7_3:63387213-63387232 | Msa1115850:intron | 15.0% |
| !! | ATTAAAATATATATTAGTGC+AGG | - | chr7_3:63387351-63387370 | None:intergenic | 15.0% |
| !! | CTTTATGATTAAAAGGATTA+TGG | - | chr7_3:63385593-63385612 | None:intergenic | 20.0% |
| !!! | CATAATCCTTTTAATCATAA+AGG | + | chr7_3:63385591-63385610 | Msa1115850:intron | 20.0% |
| !!! | TTCTATTTTAAGAAAGTGTA+GGG | - | chr7_3:63385898-63385917 | None:intergenic | 20.0% |
| !!! | ATTCTATTTTAAGAAAGTGT+AGG | - | chr7_3:63385899-63385918 | None:intergenic | 20.0% |
| !!! | ATTTAGTGTTAAATGACTTT+TGG | + | chr7_3:63386047-63386066 | Msa1115850:intron | 20.0% |
| !! | TTGCTACATCTAAAAAAAAA+TGG | + | chr7_3:63386104-63386123 | Msa1115850:intron | 20.0% |
| !! | TGCTACATCTAAAAAAAAAT+GGG | + | chr7_3:63386105-63386124 | Msa1115850:intron | 20.0% |
| !! | AACAATTTCTGTCTAATTTA+TGG | + | chr7_3:63386363-63386382 | Msa1115850:intron | 20.0% |
| !! | AACATATTGAACAATCAAAT+TGG | + | chr7_3:63386630-63386649 | Msa1115850:CDS | 20.0% |
| !! | AAACATAATTGTCTTAAAAG+GGG | - | chr7_3:63387181-63387200 | None:intergenic | 20.0% |
| !! | AGATCTTCAAAAACAATTAA+AGG | + | chr7_3:63387286-63387305 | Msa1115850:CDS | 20.0% |
| !! | CTTTATGATTAAAAGGATTA+TGG | - | chr7_3:63385593-63385612 | None:intergenic | 20.0% |
| !!! | CATAATCCTTTTAATCATAA+AGG | + | chr7_3:63385591-63385610 | Msa1115850:intron | 20.0% |
| !!! | TTCTATTTTAAGAAAGTGTA+GGG | - | chr7_3:63385898-63385917 | None:intergenic | 20.0% |
| !!! | ATTCTATTTTAAGAAAGTGT+AGG | - | chr7_3:63385899-63385918 | None:intergenic | 20.0% |
| !!! | ATTTAGTGTTAAATGACTTT+TGG | + | chr7_3:63386047-63386066 | Msa1115850:intron | 20.0% |
| !! | TTGCTACATCTAAAAAAAAA+TGG | + | chr7_3:63386104-63386123 | Msa1115850:intron | 20.0% |
| !! | TGCTACATCTAAAAAAAAAT+GGG | + | chr7_3:63386105-63386124 | Msa1115850:intron | 20.0% |
| !! | AACAATTTCTGTCTAATTTA+TGG | + | chr7_3:63386363-63386382 | Msa1115850:intron | 20.0% |
| !! | AACATATTGAACAATCAAAT+TGG | + | chr7_3:63386630-63386649 | Msa1115850:CDS | 20.0% |
| !! | AAACATAATTGTCTTAAAAG+GGG | - | chr7_3:63387181-63387200 | None:intergenic | 20.0% |
| !! | AGATCTTCAAAAACAATTAA+AGG | + | chr7_3:63387286-63387305 | Msa1115850:CDS | 20.0% |
| ! | TTGTCACCTTTATGATTAAA+AGG | - | chr7_3:63385600-63385619 | None:intergenic | 25.0% |
| !! | TTTCTTCTAGACAACTTTTT+AGG | + | chr7_3:63385844-63385863 | Msa1115850:intron | 25.0% |
| !!! | GCAATTTTTTGTGAATATAG+TGG | + | chr7_3:63385965-63385984 | Msa1115850:intron | 25.0% |
| ! | ACTAAAATTGTATCTTGTGT+TGG | - | chr7_3:63386007-63386026 | None:intergenic | 25.0% |
| ! | TGTATTTCATTGTAGTTACA+TGG | + | chr7_3:63386232-63386251 | Msa1115850:intron | 25.0% |
| ! | TGCATATAAATGTAAATTGC+AGG | + | chr7_3:63386534-63386553 | Msa1115850:intron | 25.0% |
| ! | GCATATAAATGTAAATTGCA+GGG | + | chr7_3:63386535-63386554 | Msa1115850:intron | 25.0% |
| ! | AATTGCAAATCAGCAAAATT+AGG | - | chr7_3:63386872-63386891 | None:intergenic | 25.0% |
| !! | AACATTTCTGATGATTTTCT+TGG | - | chr7_3:63386960-63386979 | None:intergenic | 25.0% |
| ! | ATCATCAGAAATGTTTATTG+TGG | + | chr7_3:63386965-63386984 | Msa1115850:intron | 25.0% |
| ! | AATGTTTATTGTGGAGAATT+TGG | + | chr7_3:63386974-63386993 | Msa1115850:CDS | 25.0% |
| ! | AACATAATTGTCTTAAAAGG+GGG | - | chr7_3:63387180-63387199 | None:intergenic | 25.0% |
| ! | TTGTCACCTTTATGATTAAA+AGG | - | chr7_3:63385600-63385619 | None:intergenic | 25.0% |
| !! | TTTCTTCTAGACAACTTTTT+AGG | + | chr7_3:63385844-63385863 | Msa1115850:intron | 25.0% |
| !!! | GCAATTTTTTGTGAATATAG+TGG | + | chr7_3:63385965-63385984 | Msa1115850:intron | 25.0% |
| ! | ACTAAAATTGTATCTTGTGT+TGG | - | chr7_3:63386007-63386026 | None:intergenic | 25.0% |
| ! | TGTATTTCATTGTAGTTACA+TGG | + | chr7_3:63386232-63386251 | Msa1115850:intron | 25.0% |
| ! | TGCATATAAATGTAAATTGC+AGG | + | chr7_3:63386534-63386553 | Msa1115850:intron | 25.0% |
| ! | GCATATAAATGTAAATTGCA+GGG | + | chr7_3:63386535-63386554 | Msa1115850:intron | 25.0% |
| ! | AATTGCAAATCAGCAAAATT+AGG | - | chr7_3:63386872-63386891 | None:intergenic | 25.0% |
| !! | AACATTTCTGATGATTTTCT+TGG | - | chr7_3:63386960-63386979 | None:intergenic | 25.0% |
| ! | ATCATCAGAAATGTTTATTG+TGG | + | chr7_3:63386965-63386984 | Msa1115850:intron | 25.0% |
| ! | AATGTTTATTGTGGAGAATT+TGG | + | chr7_3:63386974-63386993 | Msa1115850:CDS | 25.0% |
| ! | AACATAATTGTCTTAAAAGG+GGG | - | chr7_3:63387180-63387199 | None:intergenic | 25.0% |
| !!! | TTGAATTTGGTTGGTTTTGT+TGG | - | chr7_3:63385476-63385495 | None:intergenic | 30.0% |
| AACAAAACCAACCAAATTCA+AGG | + | chr7_3:63385475-63385494 | Msa1115850:CDS | 30.0% | |
| ! | ATCTACCTTTAGAGAATTCA+TGG | + | chr7_3:63385566-63385585 | Msa1115850:intron | 30.0% |
| TATAGAATGGATCAACACAA+AGG | + | chr7_3:63385675-63385694 | Msa1115850:CDS | 30.0% | |
| TACTACAATACCATTTCCAA+AGG | - | chr7_3:63385769-63385788 | None:intergenic | 30.0% | |
| ! | GCTAGTTCAATGTTTCTTTT+GGG | + | chr7_3:63385866-63385885 | Msa1115850:intron | 30.0% |
| ! | CTAGTTCAATGTTTCTTTTG+GGG | + | chr7_3:63385867-63385886 | Msa1115850:intron | 30.0% |
| ! | TAGTTCAATGTTTCTTTTGG+GGG | + | chr7_3:63385868-63385887 | Msa1115850:intron | 30.0% |
| AAGTTATTTATGTACAAGGG+AGG | + | chr7_3:63386314-63386333 | Msa1115850:intron | 30.0% | |
| GATTCAAATCATGAGATAGT+AGG | + | chr7_3:63386402-63386421 | Msa1115850:intron | 30.0% | |
| CTAATGTGATTCATATTGCT+AGG | - | chr7_3:63386488-63386507 | None:intergenic | 30.0% | |
| !! | AAAGGTGTTGAAAACTATGA+TGG | + | chr7_3:63386570-63386589 | Msa1115850:CDS | 30.0% |
| !! | AAGGTGTTGAAAACTATGAT+GGG | + | chr7_3:63386571-63386590 | Msa1115850:CDS | 30.0% |
| GTTATGTGATAACATTCTCA+AGG | - | chr7_3:63386679-63386698 | None:intergenic | 30.0% | |
| !! | TATCACATAACTCTAAAACG+AGG | + | chr7_3:63386688-63386707 | Msa1115850:CDS | 30.0% |
| AATGAGGATGCTCAATATTA+TGG | + | chr7_3:63386762-63386781 | Msa1115850:CDS | 30.0% | |
| CATTTATGATTCTAATGACC+AGG | + | chr7_3:63386794-63386813 | Msa1115850:intron | 30.0% | |
| AAGTTAACCTGTTATATACC+TGG | - | chr7_3:63386815-63386834 | None:intergenic | 30.0% | |
| TAGGAGACAAAATTGCATTT+AGG | - | chr7_3:63386853-63386872 | None:intergenic | 30.0% | |
| ATTCTGACCTTATCAATGTT+TGG | - | chr7_3:63387131-63387150 | None:intergenic | 30.0% | |
| !!! | TTGAATTTGGTTGGTTTTGT+TGG | - | chr7_3:63385476-63385495 | None:intergenic | 30.0% |
| AACAAAACCAACCAAATTCA+AGG | + | chr7_3:63385475-63385494 | Msa1115850:CDS | 30.0% | |
| ! | ATCTACCTTTAGAGAATTCA+TGG | + | chr7_3:63385566-63385585 | Msa1115850:intron | 30.0% |
| TATAGAATGGATCAACACAA+AGG | + | chr7_3:63385675-63385694 | Msa1115850:CDS | 30.0% | |
| TACTACAATACCATTTCCAA+AGG | - | chr7_3:63385769-63385788 | None:intergenic | 30.0% | |
| ! | GCTAGTTCAATGTTTCTTTT+GGG | + | chr7_3:63385866-63385885 | Msa1115850:intron | 30.0% |
| ! | CTAGTTCAATGTTTCTTTTG+GGG | + | chr7_3:63385867-63385886 | Msa1115850:intron | 30.0% |
| ! | TAGTTCAATGTTTCTTTTGG+GGG | + | chr7_3:63385868-63385887 | Msa1115850:intron | 30.0% |
| AAGTTATTTATGTACAAGGG+AGG | + | chr7_3:63386314-63386333 | Msa1115850:intron | 30.0% | |
| GATTCAAATCATGAGATAGT+AGG | + | chr7_3:63386402-63386421 | Msa1115850:intron | 30.0% | |
| CTAATGTGATTCATATTGCT+AGG | - | chr7_3:63386488-63386507 | None:intergenic | 30.0% | |
| !! | AAAGGTGTTGAAAACTATGA+TGG | + | chr7_3:63386570-63386589 | Msa1115850:CDS | 30.0% |
| !! | AAGGTGTTGAAAACTATGAT+GGG | + | chr7_3:63386571-63386590 | Msa1115850:CDS | 30.0% |
| GTTATGTGATAACATTCTCA+AGG | - | chr7_3:63386679-63386698 | None:intergenic | 30.0% | |
| !! | TATCACATAACTCTAAAACG+AGG | + | chr7_3:63386688-63386707 | Msa1115850:CDS | 30.0% |
| AATGAGGATGCTCAATATTA+TGG | + | chr7_3:63386762-63386781 | Msa1115850:CDS | 30.0% | |
| CATTTATGATTCTAATGACC+AGG | + | chr7_3:63386794-63386813 | Msa1115850:intron | 30.0% | |
| AAGTTAACCTGTTATATACC+TGG | - | chr7_3:63386815-63386834 | None:intergenic | 30.0% | |
| TAGGAGACAAAATTGCATTT+AGG | - | chr7_3:63386853-63386872 | None:intergenic | 30.0% | |
| ATTCTGACCTTATCAATGTT+TGG | - | chr7_3:63387131-63387150 | None:intergenic | 30.0% | |
| AAACGAAGCAACCTTGAATT+TGG | - | chr7_3:63385489-63385508 | None:intergenic | 35.0% | |
| TCAAGTTTCAAACAAGCTGA+AGG | + | chr7_3:63385513-63385532 | Msa1115850:CDS | 35.0% | |
| ATGGTCCATGAATTCTCTAA+AGG | - | chr7_3:63385574-63385593 | None:intergenic | 35.0% | |
| !!! | ACCAATCTTTTAAGACAGAG+TGG | + | chr7_3:63385705-63385724 | Msa1115850:CDS | 35.0% |
| ACCACTCTGTCTTAAAAGAT+TGG | - | chr7_3:63385709-63385728 | None:intergenic | 35.0% | |
| AAAGGAGATGATGTTGTTGT+TGG | - | chr7_3:63385751-63385770 | None:intergenic | 35.0% | |
| AACAACAACATCATCTCCTT+TGG | + | chr7_3:63385750-63385769 | Msa1115850:CDS | 35.0% | |
| ! | AACATCATCTCCTTTGGAAA+TGG | + | chr7_3:63385756-63385775 | Msa1115850:CDS | 35.0% |
| !! | GGCTAGTTCAATGTTTCTTT+TGG | + | chr7_3:63385865-63385884 | Msa1115850:intron | 35.0% |
| CTATGCTTGTTTAGCATTTG+TGG | - | chr7_3:63386436-63386455 | None:intergenic | 35.0% | |
| CACAAATGCTAAACAAGCAT+AGG | + | chr7_3:63386434-63386453 | Msa1115850:intron | 35.0% | |
| AAATGCTAAACAAGCATAGG+TGG | + | chr7_3:63386437-63386456 | Msa1115850:intron | 35.0% | |
| !! | AGGTGTTGAAAACTATGATG+GGG | + | chr7_3:63386572-63386591 | Msa1115850:CDS | 35.0% |
| GATAACATTCTCAAGGAAGA+AGG | - | chr7_3:63386672-63386691 | None:intergenic | 35.0% | |
| CTAATGACCAGGTATATAAC+AGG | + | chr7_3:63386805-63386824 | Msa1115850:intron | 35.0% | |
| ACGAATGAGAAAATTGCAAG+AGG | + | chr7_3:63387100-63387119 | Msa1115850:CDS | 35.0% | |
| GGTTGTTCCAAACATTGATA+AGG | + | chr7_3:63387121-63387140 | Msa1115850:CDS | 35.0% | |
| CACATCAGAAATGTTAGACT+TGG | + | chr7_3:63387247-63387266 | Msa1115850:CDS | 35.0% | |
| AAACGAAGCAACCTTGAATT+TGG | - | chr7_3:63385489-63385508 | None:intergenic | 35.0% | |
| TCAAGTTTCAAACAAGCTGA+AGG | + | chr7_3:63385513-63385532 | Msa1115850:CDS | 35.0% | |
| ATGGTCCATGAATTCTCTAA+AGG | - | chr7_3:63385574-63385593 | None:intergenic | 35.0% | |
| !!! | ACCAATCTTTTAAGACAGAG+TGG | + | chr7_3:63385705-63385724 | Msa1115850:CDS | 35.0% |
| ACCACTCTGTCTTAAAAGAT+TGG | - | chr7_3:63385709-63385728 | None:intergenic | 35.0% | |
| AAAGGAGATGATGTTGTTGT+TGG | - | chr7_3:63385751-63385770 | None:intergenic | 35.0% | |
| AACAACAACATCATCTCCTT+TGG | + | chr7_3:63385750-63385769 | Msa1115850:CDS | 35.0% | |
| ! | AACATCATCTCCTTTGGAAA+TGG | + | chr7_3:63385756-63385775 | Msa1115850:CDS | 35.0% |
| !! | GGCTAGTTCAATGTTTCTTT+TGG | + | chr7_3:63385865-63385884 | Msa1115850:intron | 35.0% |
| CTATGCTTGTTTAGCATTTG+TGG | - | chr7_3:63386436-63386455 | None:intergenic | 35.0% | |
| CACAAATGCTAAACAAGCAT+AGG | + | chr7_3:63386434-63386453 | Msa1115850:intron | 35.0% | |
| AAATGCTAAACAAGCATAGG+TGG | + | chr7_3:63386437-63386456 | Msa1115850:intron | 35.0% | |
| !! | AGGTGTTGAAAACTATGATG+GGG | + | chr7_3:63386572-63386591 | Msa1115850:CDS | 35.0% |
| GATAACATTCTCAAGGAAGA+AGG | - | chr7_3:63386672-63386691 | None:intergenic | 35.0% | |
| CTAATGACCAGGTATATAAC+AGG | + | chr7_3:63386805-63386824 | Msa1115850:intron | 35.0% | |
| ACGAATGAGAAAATTGCAAG+AGG | + | chr7_3:63387100-63387119 | Msa1115850:CDS | 35.0% | |
| GGTTGTTCCAAACATTGATA+AGG | + | chr7_3:63387121-63387140 | Msa1115850:CDS | 35.0% | |
| CACATCAGAAATGTTAGACT+TGG | + | chr7_3:63387247-63387266 | Msa1115850:CDS | 35.0% | |
| GAAGCAACCTTGAATTTGGT+TGG | - | chr7_3:63385485-63385504 | None:intergenic | 40.0% | |
| GAAGGTTGTGCTACAAATTC+TGG | + | chr7_3:63385531-63385550 | Msa1115850:CDS | 40.0% | |
| AAGACACATGAATTCTCAGC+AGG | + | chr7_3:63385650-63385669 | Msa1115850:CDS | 40.0% | |
| AGACACATGAATTCTCAGCA+GGG | + | chr7_3:63385651-63385670 | Msa1115850:CDS | 40.0% | |
| TTCTCAGCAGGGTTATAGAA+TGG | + | chr7_3:63385662-63385681 | Msa1115850:CDS | 40.0% | |
| GTGAATATAGTGGTCAGCTA+AGG | + | chr7_3:63385975-63385994 | Msa1115850:intron | 40.0% | |
| TATAGTGGTCAGCTAAGGTT+TGG | + | chr7_3:63385980-63385999 | Msa1115850:intron | 40.0% | |
| CTAAGTCTAACGCTATTCGT+TGG | - | chr7_3:63386206-63386225 | None:intergenic | 40.0% | |
| GCAGGGTATGAATCTATGAA+AGG | + | chr7_3:63386552-63386571 | Msa1115850:intron | 40.0% | |
| !! | AACTCTAAAACGAGGAGTGA+TGG | + | chr7_3:63386696-63386715 | Msa1115850:CDS | 40.0% |
| TGATGTTACTCAGAACGTAG+AGG | + | chr7_3:63386893-63386912 | Msa1115850:intron | 40.0% | |
| GAAGCAACCTTGAATTTGGT+TGG | - | chr7_3:63385485-63385504 | None:intergenic | 40.0% | |
| GAAGGTTGTGCTACAAATTC+TGG | + | chr7_3:63385531-63385550 | Msa1115850:CDS | 40.0% | |
| AAGACACATGAATTCTCAGC+AGG | + | chr7_3:63385650-63385669 | Msa1115850:CDS | 40.0% | |
| AGACACATGAATTCTCAGCA+GGG | + | chr7_3:63385651-63385670 | Msa1115850:CDS | 40.0% | |
| TTCTCAGCAGGGTTATAGAA+TGG | + | chr7_3:63385662-63385681 | Msa1115850:CDS | 40.0% | |
| GTGAATATAGTGGTCAGCTA+AGG | + | chr7_3:63385975-63385994 | Msa1115850:intron | 40.0% | |
| TATAGTGGTCAGCTAAGGTT+TGG | + | chr7_3:63385980-63385999 | Msa1115850:intron | 40.0% | |
| CTAAGTCTAACGCTATTCGT+TGG | - | chr7_3:63386206-63386225 | None:intergenic | 40.0% | |
| GCAGGGTATGAATCTATGAA+AGG | + | chr7_3:63386552-63386571 | Msa1115850:intron | 40.0% | |
| !! | AACTCTAAAACGAGGAGTGA+TGG | + | chr7_3:63386696-63386715 | Msa1115850:CDS | 40.0% |
| TGATGTTACTCAGAACGTAG+AGG | + | chr7_3:63386893-63386912 | Msa1115850:intron | 40.0% | |
| GTTGGAGAAATGACCAGCAT+GGG | - | chr7_3:63385733-63385752 | None:intergenic | 45.0% | |
| TGTTGGAGAAATGACCAGCA+TGG | - | chr7_3:63385734-63385753 | None:intergenic | 45.0% | |
| CTCAAGGAAGAAGGACTTCT+TGG | - | chr7_3:63386663-63386682 | None:intergenic | 45.0% | |
| AAAACGAGGAGTGATGGCAT+TGG | + | chr7_3:63386702-63386721 | Msa1115850:CDS | 45.0% | |
| CTCCTTGTCTTCGATCATCA+CGG | - | chr7_3:63386737-63386756 | None:intergenic | 45.0% | |
| AAGACAAGGAGGTAGCAATG+AGG | + | chr7_3:63386746-63386765 | Msa1115850:CDS | 45.0% | |
| TCGGAACAGAATCTGGAAAC+TGG | - | chr7_3:63387001-63387020 | None:intergenic | 45.0% | |
| TTCTTCTTACCCTTTCGGCA+AGG | - | chr7_3:63387067-63387086 | None:intergenic | 45.0% | |
| CCGAGTTCTTCTTACCCTTT+CGG | - | chr7_3:63387072-63387091 | None:intergenic | 45.0% | |
| CCGAAAGGGTAAGAAGAACT+CGG | + | chr7_3:63387069-63387088 | Msa1115850:CDS | 45.0% | |
| GTTGGAGAAATGACCAGCAT+GGG | - | chr7_3:63385733-63385752 | None:intergenic | 45.0% | |
| TGTTGGAGAAATGACCAGCA+TGG | - | chr7_3:63385734-63385753 | None:intergenic | 45.0% | |
| CTCAAGGAAGAAGGACTTCT+TGG | - | chr7_3:63386663-63386682 | None:intergenic | 45.0% | |
| AAAACGAGGAGTGATGGCAT+TGG | + | chr7_3:63386702-63386721 | Msa1115850:CDS | 45.0% | |
| CTCCTTGTCTTCGATCATCA+CGG | - | chr7_3:63386737-63386756 | None:intergenic | 45.0% | |
| AAGACAAGGAGGTAGCAATG+AGG | + | chr7_3:63386746-63386765 | Msa1115850:CDS | 45.0% | |
| TCGGAACAGAATCTGGAAAC+TGG | - | chr7_3:63387001-63387020 | None:intergenic | 45.0% | |
| TTCTTCTTACCCTTTCGGCA+AGG | - | chr7_3:63387067-63387086 | None:intergenic | 45.0% | |
| CCGAGTTCTTCTTACCCTTT+CGG | - | chr7_3:63387072-63387091 | None:intergenic | 45.0% | |
| CCGAAAGGGTAAGAAGAACT+CGG | + | chr7_3:63387069-63387088 | Msa1115850:CDS | 45.0% | |
| GATGGGGTGAATGACAGTGA+TGG | + | chr7_3:63386588-63386607 | Msa1115850:CDS | 50.0% | |
| AGCCGTGATGATCGAAGACA+AGG | + | chr7_3:63386732-63386751 | Msa1115850:CDS | 50.0% | |
| CGTGATGATCGAAGACAAGG+AGG | + | chr7_3:63386735-63386754 | Msa1115850:CDS | 50.0% | |
| ATGCTGCTCGGAACAGAATC+TGG | - | chr7_3:63387008-63387027 | None:intergenic | 50.0% | |
| CTCTTTGCTCTGATGCTGCT+CGG | - | chr7_3:63387020-63387039 | None:intergenic | 50.0% | |
| AGCAGCATCAGAGCAAAGAG+AGG | + | chr7_3:63387020-63387039 | Msa1115850:CDS | 50.0% | |
| ATCCTAGAAGCCTTGCCGAA+AGG | + | chr7_3:63387054-63387073 | Msa1115850:CDS | 50.0% | |
| TCCTAGAAGCCTTGCCGAAA+GGG | + | chr7_3:63387055-63387074 | Msa1115850:CDS | 50.0% | |
| GATGGGGTGAATGACAGTGA+TGG | + | chr7_3:63386588-63386607 | Msa1115850:CDS | 50.0% | |
| AGCCGTGATGATCGAAGACA+AGG | + | chr7_3:63386732-63386751 | Msa1115850:CDS | 50.0% | |
| CGTGATGATCGAAGACAAGG+AGG | + | chr7_3:63386735-63386754 | Msa1115850:CDS | 50.0% | |
| ATGCTGCTCGGAACAGAATC+TGG | - | chr7_3:63387008-63387027 | None:intergenic | 50.0% | |
| CTCTTTGCTCTGATGCTGCT+CGG | - | chr7_3:63387020-63387039 | None:intergenic | 50.0% | |
| AGCAGCATCAGAGCAAAGAG+AGG | + | chr7_3:63387020-63387039 | Msa1115850:CDS | 50.0% | |
| ATCCTAGAAGCCTTGCCGAA+AGG | + | chr7_3:63387054-63387073 | Msa1115850:CDS | 50.0% | |
| TCCTAGAAGCCTTGCCGAAA+GGG | + | chr7_3:63387055-63387074 | Msa1115850:CDS | 50.0% | |
| AGACAGAGTGGTTCCCATGC+TGG | + | chr7_3:63385717-63385736 | Msa1115850:CDS | 55.0% | |
| ACCCTTTCGGCAAGGCTTCT+AGG | - | chr7_3:63387059-63387078 | None:intergenic | 55.0% | |
| AGACAGAGTGGTTCCCATGC+TGG | + | chr7_3:63385717-63385736 | Msa1115850:CDS | 55.0% | |
| ACCCTTTCGGCAAGGCTTCT+AGG | - | chr7_3:63387059-63387078 | None:intergenic | 55.0% |
| Chromosome | Type | Strat | End | Strand | Name |
|---|---|---|---|---|---|
| chr7_3 | gene | 63385444 | 63387430 | 63385444 | ID=Msa1115850;Name=Msa1115850 |
| chr7_3 | mRNA | 63385444 | 63387430 | 63385444 | ID=Msa1115850-mRNA-1;Parent=Msa1115850;Name=Msa1115850-mRNA-1;_AED=0.18;_eAED=0.18;_QI=0|0|0|1|0.6|0.33|6|0|262 |
| chr7_3 | exon | 63385444 | 63385552 | 63385444 | ID=Msa1115850-mRNA-1:exon:14833;Parent=Msa1115850-mRNA-1 |
| chr7_3 | exon | 63385613 | 63385777 | 63385613 | ID=Msa1115850-mRNA-1:exon:14834;Parent=Msa1115850-mRNA-1 |
| chr7_3 | exon | 63386556 | 63386783 | 63386556 | ID=Msa1115850-mRNA-1:exon:14835;Parent=Msa1115850-mRNA-1 |
| chr7_3 | exon | 63386973 | 63387142 | 63386973 | ID=Msa1115850-mRNA-1:exon:14836;Parent=Msa1115850-mRNA-1 |
| chr7_3 | exon | 63387239 | 63387307 | 63387239 | ID=Msa1115850-mRNA-1:exon:14837;Parent=Msa1115850-mRNA-1 |
| chr7_3 | exon | 63387383 | 63387430 | 63387383 | ID=Msa1115850-mRNA-1:exon:14838;Parent=Msa1115850-mRNA-1 |
| chr7_3 | CDS | 63385444 | 63385552 | 63385444 | ID=Msa1115850-mRNA-1:cds;Parent=Msa1115850-mRNA-1 |
| chr7_3 | CDS | 63385613 | 63385777 | 63385613 | ID=Msa1115850-mRNA-1:cds;Parent=Msa1115850-mRNA-1 |
| chr7_3 | CDS | 63386556 | 63386783 | 63386556 | ID=Msa1115850-mRNA-1:cds;Parent=Msa1115850-mRNA-1 |
| chr7_3 | CDS | 63386973 | 63387142 | 63386973 | ID=Msa1115850-mRNA-1:cds;Parent=Msa1115850-mRNA-1 |
| chr7_3 | CDS | 63387239 | 63387307 | 63387239 | ID=Msa1115850-mRNA-1:cds;Parent=Msa1115850-mRNA-1 |
| chr7_3 | CDS | 63387383 | 63387430 | 63387383 | ID=Msa1115850-mRNA-1:cds;Parent=Msa1115850-mRNA-1 |
| Gene Sequence |
| Protein sequence |
