Alfalfa Gene Editing Database
Alfalfa Gene Editing Database
| Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|
| Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|
| Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa0115160 | A0A072VJK1 | 99.176 | 364 | 3 | 0 | 1 | 364 | 1 | 364 | 0.0 | 754 |
| Gene ID | Type | Classification |
|---|
| Gene ID | Type | Classification |
|---|
Co-expression Network
| Gene1 | Gene2 | correlation coefficient | p_value | FDR |
|---|---|---|---|---|
| Msa0002490 | Msa0115160 | 0.811228 | 7.777058e-51 | -8.615850e-47 |
| Msa0003700 | Msa0115160 | 0.842565 | 2.393064e-58 | -8.615850e-47 |
| Msa0007480 | Msa0115160 | 0.800379 | 1.481396e-48 | -8.615850e-47 |
| Msa0009760 | Msa0115160 | 0.815378 | 9.533399e-52 | -8.615850e-47 |
| Msa0016670 | Msa0115160 | 0.885453 | 8.025422e-72 | -8.615850e-47 |
| Msa0017510 | Msa0115160 | 0.822410 | 2.404501e-53 | -8.615850e-47 |
| Msa0018000 | Msa0115160 | 0.817054 | 4.023001e-52 | -8.615850e-47 |
| Msa0026130 | Msa0115160 | 0.823615 | 1.259050e-53 | -8.615850e-47 |
| Msa0027260 | Msa0115160 | 0.822120 | 2.807170e-53 | -8.615850e-47 |
| Msa0028420 | Msa0115160 | 0.811142 | 8.115572e-51 | -8.615850e-47 |
| Msa0032370 | Msa0115160 | 0.800855 | 1.184954e-48 | -8.615850e-47 |
| Msa0032840 | Msa0115160 | -0.806597 | 7.615031e-50 | -8.615850e-47 |
| Msa0036430 | Msa0115160 | 0.809066 | 2.273292e-50 | -8.615850e-47 |
| Msa0036850 | Msa0115160 | 0.826072 | 3.315351e-54 | -8.615850e-47 |
| Msa0040690 | Msa0115160 | 0.800697 | 1.276338e-48 | -8.615850e-47 |
| Msa0043670 | Msa0115160 | -0.813031 | 3.144953e-51 | -8.615850e-47 |
| Msa0044020 | Msa0115160 | 0.813044 | 3.123573e-51 | -8.615850e-47 |
| Msa0046100 | Msa0115160 | 0.827635 | 1.403442e-54 | -8.615850e-47 |
| Msa0052610 | Msa0115160 | 0.800496 | 1.402710e-48 | -8.615850e-47 |
| Msa0057710 | Msa0115160 | 0.802350 | 5.850417e-49 | -8.615850e-47 |
| Msa0067280 | Msa0115160 | 0.812542 | 4.022341e-51 | -8.615850e-47 |
| Msa0069330 | Msa0115160 | 0.810239 | 1.272498e-50 | -8.615850e-47 |
| Msa0070680 | Msa0115160 | 0.805187 | 1.506677e-49 | -8.615850e-47 |
| Msa0073670 | Msa0115160 | 0.826131 | 3.209523e-54 | -8.615850e-47 |
| Msa0074320 | Msa0115160 | 0.814903 | 1.215118e-51 | -8.615850e-47 |
| Msa0076040 | Msa0115160 | 0.810034 | 1.408591e-50 | -8.615850e-47 |
| Msa0081360 | Msa0115160 | 0.828011 | 1.139662e-54 | -8.615850e-47 |
| Msa0081480 | Msa0115160 | 0.827370 | 1.624625e-54 | -8.615850e-47 |
| Msa0081520 | Msa0115160 | 0.843354 | 1.475663e-58 | -8.615850e-47 |
| Msa0089630 | Msa0115160 | 0.809507 | 1.828914e-50 | -8.615850e-47 |
| Msa0090590 | Msa0115160 | 0.834162 | 3.516236e-56 | -8.615850e-47 |
| Msa0092740 | Msa0115160 | -0.812007 | 5.263549e-51 | -8.615850e-47 |
| Msa0094120 | Msa0115160 | 0.822729 | 2.026819e-53 | -8.615850e-47 |
| Msa0094850 | Msa0115160 | 0.812990 | 3.209925e-51 | -8.615850e-47 |
| Msa0096670 | Msa0115160 | 0.806695 | 7.258909e-50 | -8.615850e-47 |
| Msa0097810 | Msa0115160 | 0.807839 | 4.154662e-50 | -8.615850e-47 |
| Msa0104550 | Msa0115160 | 0.800836 | 1.195562e-48 | -8.615850e-47 |
| Msa0110360 | Msa0115160 | 0.816335 | 5.830166e-52 | -8.615850e-47 |
| Msa0110970 | Msa0115160 | 0.853662 | 2.060018e-61 | -8.615850e-47 |
| Msa0112790 | Msa0115160 | 0.801466 | 8.883898e-49 | -8.615850e-47 |
| Msa0114540 | Msa0115160 | -0.804193 | 2.430028e-49 | -8.615850e-47 |
| Msa0115160 | Msa0116340 | 0.810476 | 1.131289e-50 | -8.615850e-47 |
| Msa0115160 | Msa0118570 | 0.889150 | 3.132551e-73 | -8.615850e-47 |
| Msa0115160 | Msa0124340 | 0.830023 | 3.708398e-55 | -8.615850e-47 |
| Msa0115160 | Msa0128860 | 0.806330 | 8.670300e-50 | -8.615850e-47 |
| Msa0115160 | Msa0130240 | 0.815554 | 8.712675e-52 | -8.615850e-47 |
| Msa0115160 | Msa0134180 | 0.853437 | 2.391185e-61 | -8.615850e-47 |
| Msa0115160 | Msa0134610 | 0.829819 | 4.157290e-55 | -8.615850e-47 |
| Msa0115160 | Msa0137610 | -0.815813 | 7.627092e-52 | -8.615850e-47 |
| Msa0115160 | Msa0144360 | 0.809918 | 1.492055e-50 | -8.615850e-47 |
| Msa0115160 | Msa0146260 | 0.832549 | 8.870939e-56 | -8.615850e-47 |
| Msa0115160 | Msa0146280 | 0.802427 | 5.638169e-49 | -8.615850e-47 |
| Msa0115160 | Msa0157290 | 0.823595 | 1.273130e-53 | -8.615850e-47 |
| Msa0115160 | Msa0166590 | 0.817474 | 3.237209e-52 | -8.615850e-47 |
| Msa0115160 | Msa0168500 | 0.812981 | 3.223829e-51 | -8.615850e-47 |
| Msa0115160 | Msa0173890 | 0.844661 | 6.582929e-59 | -8.615850e-47 |
| Msa0115160 | Msa0174730 | 0.807285 | 5.447011e-50 | -8.615850e-47 |
| Msa0115160 | Msa0180930 | 0.820171 | 7.898850e-53 | -8.615850e-47 |
| Msa0115160 | Msa0181610 | 0.809676 | 1.681875e-50 | -8.615850e-47 |
| Msa0115160 | Msa0182620 | -0.807131 | 5.872767e-50 | -8.615850e-47 |
| Msa0115160 | Msa0183830 | 0.835417 | 1.698237e-56 | -8.615850e-47 |
| Msa0115160 | Msa0186890 | 0.832815 | 7.622633e-56 | -8.615850e-47 |
| Msa0115160 | Msa0187690 | 0.802214 | 6.239304e-49 | -8.615850e-47 |
| Msa0115160 | Msa0187930 | 0.812190 | 4.802123e-51 | -8.615850e-47 |
| Msa0115160 | Msa0193120 | 0.806329 | 8.674580e-50 | -8.615850e-47 |
| Msa0115160 | Msa0194540 | 0.824280 | 8.792117e-54 | -8.615850e-47 |
| Msa0115160 | Msa0197420 | 0.845157 | 4.839199e-59 | -8.615850e-47 |
| Msa0115160 | Msa0197930 | 0.809869 | 1.528385e-50 | -8.615850e-47 |
| Msa0115160 | Msa0205840 | 0.828855 | 7.126963e-55 | -8.615850e-47 |
| Msa0115160 | Msa0205850 | 0.801738 | 7.815986e-49 | -8.615850e-47 |
| Msa0115160 | Msa0206840 | 0.811622 | 6.385612e-51 | -8.615850e-47 |
| Msa0115160 | Msa0213280 | 0.819050 | 1.423805e-52 | -8.615850e-47 |
| Msa0115160 | Msa0223250 | 0.813994 | 1.931044e-51 | -8.615850e-47 |
| Msa0115160 | Msa0225740 | 0.830026 | 3.703103e-55 | -8.615850e-47 |
| Msa0115160 | Msa0230550 | -0.801932 | 7.128320e-49 | -8.615850e-47 |
| Msa0115160 | Msa0239190 | 0.823578 | 1.284396e-53 | -8.615850e-47 |
| Msa0115160 | Msa0239570 | 0.837960 | 3.817782e-57 | -8.615850e-47 |
| Msa0115160 | Msa0241800 | 0.800755 | 1.242027e-48 | -8.615850e-47 |
| Msa0115160 | Msa0244780 | 0.810702 | 1.010814e-50 | -8.615850e-47 |
| Msa0115160 | Msa0248970 | 0.832534 | 8.950677e-56 | -8.615850e-47 |
| Msa0115160 | Msa0253700 | 0.837612 | 4.690246e-57 | -8.615850e-47 |
| Msa0115160 | Msa0255090 | 0.811593 | 6.478934e-51 | -8.615850e-47 |
| Msa0115160 | Msa0259380 | 0.803878 | 2.825002e-49 | -8.615850e-47 |
| Msa0115160 | Msa0261340 | 0.801317 | 9.532790e-49 | -8.615850e-47 |
| Msa0115160 | Msa0264570 | 0.802991 | 4.313526e-49 | -8.615850e-47 |
| Msa0115160 | Msa0264870 | 0.829435 | 5.155739e-55 | -8.615850e-47 |
| Msa0115160 | Msa0268130 | 0.817064 | 4.002374e-52 | -8.615850e-47 |
| Msa0115160 | Msa0274680 | 0.804573 | 2.024345e-49 | -8.615850e-47 |
| Msa0115160 | Msa0277180 | 0.830636 | 2.626037e-55 | -8.615850e-47 |
| Msa0115160 | Msa0292400 | 0.870167 | 1.790939e-66 | -8.615850e-47 |
| Msa0115160 | Msa0294160 | 0.807147 | 5.825127e-50 | -8.615850e-47 |
| Msa0115160 | Msa0294390 | 0.812419 | 4.279245e-51 | -8.615850e-47 |
| Msa0115160 | Msa0297740 | 0.802656 | 5.058772e-49 | -8.615850e-47 |
| Msa0115160 | Msa0298990 | 0.811552 | 6.613222e-51 | -8.615850e-47 |
| Msa0115160 | Msa0300320 | 0.803992 | 2.675131e-49 | -8.615850e-47 |
| Msa0115160 | Msa0300690 | 0.833341 | 5.637128e-56 | -8.615850e-47 |
| Msa0115160 | Msa0302380 | 0.816346 | 5.796968e-52 | -8.615850e-47 |
| Msa0115160 | Msa0307850 | 0.806262 | 8.960751e-50 | -8.615850e-47 |
| Msa0115160 | Msa0316810 | 0.833707 | 4.568895e-56 | -8.615850e-47 |
| Msa0115160 | Msa0317280 | 0.830777 | 2.426394e-55 | -8.615850e-47 |
| Msa0115160 | Msa0326590 | 0.803322 | 3.683793e-49 | -8.615850e-47 |
| Msa0115160 | Msa0339500 | 0.826460 | 2.680596e-54 | -8.615850e-47 |
| Msa0115160 | Msa0339640 | 0.810742 | 9.907406e-51 | -8.615850e-47 |
| Msa0115160 | Msa0345330 | 0.826157 | 3.163857e-54 | -8.615850e-47 |
| Msa0115160 | Msa0345410 | 0.825993 | 3.461807e-54 | -8.615850e-47 |
| Msa0115160 | Msa0362780 | 0.805168 | 1.520619e-49 | -8.615850e-47 |
| Msa0115160 | Msa0405710 | 0.820337 | 7.234882e-53 | -8.615850e-47 |
| Msa0115160 | Msa0410500 | 0.831329 | 1.775734e-55 | -8.615850e-47 |
| Msa0115160 | Msa0410650 | 0.803483 | 3.411862e-49 | -8.615850e-47 |
| Msa0115160 | Msa0416590 | 0.809348 | 1.978303e-50 | -8.615850e-47 |
| Msa0115160 | Msa0417880 | 0.817534 | 3.136880e-52 | -8.615850e-47 |
| Msa0115160 | Msa0422850 | 0.824055 | 9.928374e-54 | -8.615850e-47 |
| Msa0115160 | Msa0422930 | 0.821922 | 3.120885e-53 | -8.615850e-47 |
| Msa0115160 | Msa0423900 | 0.803732 | 3.028683e-49 | -8.615850e-47 |
| Msa0115160 | Msa0425940 | 0.805376 | 1.375196e-49 | -8.615850e-47 |
| Msa0115160 | Msa0434920 | 0.814441 | 1.538458e-51 | -8.615850e-47 |
| Msa0115160 | Msa0447370 | 0.821370 | 4.186532e-53 | -8.615850e-47 |
| Msa0115160 | Msa0450440 | 0.816666 | 4.916090e-52 | -8.615850e-47 |
| Msa0115160 | Msa0450720 | 0.802222 | 6.215735e-49 | -8.615850e-47 |
| Msa0115160 | Msa0461720 | 0.814450 | 1.531344e-51 | -8.615850e-47 |
| Msa0115160 | Msa0467300 | 0.828932 | 6.827582e-55 | -8.615850e-47 |
| Msa0115160 | Msa0467430 | 0.802394 | 5.728525e-49 | -8.615850e-47 |
| Msa0115160 | Msa0469030 | 0.823501 | 1.339048e-53 | -8.615850e-47 |
| Msa0115160 | Msa0474950 | 0.802596 | 5.203633e-49 | -8.615850e-47 |
| Msa0115160 | Msa0475790 | 0.859937 | 2.926577e-63 | -8.615850e-47 |
| Msa0115160 | Msa0485990 | 0.809563 | 1.778847e-50 | -8.615850e-47 |
| Msa0115160 | Msa0507680 | 0.804009 | 2.653151e-49 | -8.615850e-47 |
| Msa0115160 | Msa0513160 | 0.818116 | 2.317962e-52 | -8.615850e-47 |
| Msa0115160 | Msa0526540 | 0.817228 | 3.676252e-52 | -8.615850e-47 |
| Msa0115160 | Msa0527550 | 0.832680 | 8.234050e-56 | -8.615850e-47 |
| Msa0115160 | Msa0527860 | 0.838255 | 3.206329e-57 | -8.615850e-47 |
| Msa0115160 | Msa0541860 | 0.834258 | 3.324961e-56 | -8.615850e-47 |
| Msa0115160 | Msa0547720 | 0.806353 | 8.570544e-50 | -8.615850e-47 |
| Msa0115160 | Msa0555910 | 0.858959 | 5.757998e-63 | -8.615850e-47 |
| Msa0115160 | Msa0573380 | 0.819676 | 1.024703e-52 | -8.615850e-47 |
| Msa0115160 | Msa0574890 | 0.836439 | 9.353920e-57 | -8.615850e-47 |
| Msa0115160 | Msa0576690 | 0.815327 | 9.783568e-52 | -8.615850e-47 |
| Msa0115160 | Msa0576940 | 0.814255 | 1.691129e-51 | -8.615850e-47 |
| Msa0115160 | Msa0582450 | 0.832066 | 1.168180e-55 | -8.615850e-47 |
| Msa0115160 | Msa0586190 | 0.831386 | 1.719454e-55 | -8.615850e-47 |
| Msa0115160 | Msa0587940 | 0.820205 | 7.755340e-53 | -8.615850e-47 |
| Msa0115160 | Msa0609450 | 0.848168 | 7.277430e-60 | -8.615850e-47 |
| Msa0115160 | Msa0614000 | 0.803983 | 2.687102e-49 | -8.615850e-47 |
| Msa0115160 | Msa0616220 | 0.817771 | 2.774322e-52 | -8.615850e-47 |
| Msa0115160 | Msa0618040 | 0.822401 | 2.416129e-53 | -8.615850e-47 |
| Msa0115160 | Msa0620990 | 0.850605 | 1.524087e-60 | -8.615850e-47 |
| Msa0115160 | Msa0623330 | 0.805987 | 1.023532e-49 | -8.615850e-47 |
| Msa0115160 | Msa0624510 | 0.820365 | 7.127462e-53 | -8.615850e-47 |
| Msa0115160 | Msa0625630 | 0.813307 | 2.735006e-51 | -8.615850e-47 |
| Msa0115160 | Msa0626450 | 0.817300 | 3.541495e-52 | -8.615850e-47 |
| Msa0115160 | Msa0626490 | 0.820394 | 7.020689e-53 | -8.615850e-47 |
| Msa0115160 | Msa0628890 | 0.820753 | 5.806125e-53 | -8.615850e-47 |
| Msa0115160 | Msa0638480 | 0.822486 | 2.308801e-53 | -8.615850e-47 |
| Msa0115160 | Msa0643300 | 0.832066 | 1.168312e-55 | -8.615850e-47 |
| Msa0115160 | Msa0647130 | 0.816131 | 6.475576e-52 | -8.615850e-47 |
| Msa0115160 | Msa0650090 | 0.849792 | 2.575848e-60 | -8.615850e-47 |
| Msa0115160 | Msa0663300 | 0.831903 | 1.282064e-55 | -8.615850e-47 |
| Msa0115160 | Msa0664060 | 0.819467 | 1.144006e-52 | -8.615850e-47 |
| Msa0115160 | Msa0664600 | 0.816302 | 5.929963e-52 | -8.615850e-47 |
| Msa0115160 | Msa0664910 | 0.800464 | 1.423554e-48 | -8.615850e-47 |
| Msa0115160 | Msa0677290 | 0.820362 | 7.138899e-53 | -8.615850e-47 |
| Msa0115160 | Msa0683510 | 0.801397 | 9.180563e-49 | -8.615850e-47 |
| Msa0115160 | Msa0683570 | 0.852649 | 4.019793e-61 | -8.615850e-47 |
| Msa0115160 | Msa0684500 | 0.837590 | 4.753048e-57 | -8.615850e-47 |
| Msa0115160 | Msa0692080 | 0.857777 | 1.295221e-62 | -8.615850e-47 |
| Msa0115160 | Msa0699550 | 0.805458 | 1.322205e-49 | -8.615850e-47 |
| Msa0115160 | Msa0701280 | 0.829188 | 5.919166e-55 | -8.615850e-47 |
| Msa0115160 | Msa0702340 | 0.852551 | 4.285701e-61 | -8.615850e-47 |
| Msa0115160 | Msa0702590 | 0.855043 | 8.221010e-62 | -8.615850e-47 |
| Msa0115160 | Msa0702660 | 0.855735 | 5.169260e-62 | -8.615850e-47 |
| Msa0115160 | Msa0703230 | 0.834893 | 2.302483e-56 | -8.615850e-47 |
| Msa0115160 | Msa0709780 | 0.806811 | 6.863235e-50 | -8.615850e-47 |
| Msa0115160 | Msa0718550 | 0.823281 | 1.506938e-53 | -8.615850e-47 |
| Msa0115160 | Msa0738040 | 0.845031 | 5.231362e-59 | -8.615850e-47 |
| Msa0115160 | Msa0750880 | 0.815265 | 1.009888e-51 | -8.615850e-47 |
| Msa0115160 | Msa0754520 | 0.804432 | 2.166557e-49 | -8.615850e-47 |
| Msa0115160 | Msa0760380 | 0.806714 | 7.194572e-50 | -8.615850e-47 |
| Msa0115160 | Msa0763830 | 0.806870 | 6.667222e-50 | -8.615850e-47 |
| Msa0115160 | Msa0780250 | 0.811058 | 8.463413e-51 | -8.615850e-47 |
| Msa0115160 | Msa0785210 | 0.852555 | 4.276145e-61 | -8.615850e-47 |
| Msa0115160 | Msa0788770 | 0.825702 | 4.059564e-54 | -8.615850e-47 |
| Msa0115160 | Msa0801210 | 0.817529 | 3.145125e-52 | -8.615850e-47 |
| Msa0115160 | Msa0821760 | 0.836072 | 1.159326e-56 | -8.615850e-47 |
| Msa0115160 | Msa0823820 | 0.810428 | 1.158595e-50 | -8.615850e-47 |
| Msa0115160 | Msa0824640 | 0.802394 | 5.728095e-49 | -8.615850e-47 |
| Msa0115160 | Msa0826130 | 0.812289 | 4.568874e-51 | -8.615850e-47 |
| Msa0115160 | Msa0833220 | 0.806727 | 7.146801e-50 | -8.615850e-47 |
| Msa0115160 | Msa0856050 | 0.816206 | 6.232063e-52 | -8.615850e-47 |
| Msa0115160 | Msa0861510 | 0.825693 | 4.078261e-54 | -8.615850e-47 |
| Msa0115160 | Msa0861530 | 0.812675 | 3.761854e-51 | -8.615850e-47 |
| Msa0115160 | Msa0861600 | 0.816630 | 5.008592e-52 | -8.615850e-47 |
| Msa0115160 | Msa0861870 | 0.800601 | 1.335205e-48 | -8.615850e-47 |
| Msa0115160 | Msa0863010 | 0.812554 | 3.998968e-51 | -8.615850e-47 |
| Msa0115160 | Msa0864010 | 0.817052 | 4.027986e-52 | -8.615850e-47 |
| Msa0115160 | Msa0869780 | 0.809568 | 1.774140e-50 | -8.615850e-47 |
| Msa0115160 | Msa0880140 | 0.822958 | 1.793139e-53 | -8.615850e-47 |
| Msa0115160 | Msa0896970 | 0.831596 | 1.525778e-55 | -8.615850e-47 |
| Msa0115160 | Msa0902760 | 0.809907 | 1.500480e-50 | -8.615850e-47 |
| Msa0115160 | Msa0909230 | 0.813184 | 2.910065e-51 | -8.615850e-47 |
| Msa0115160 | Msa0930780 | 0.839411 | 1.610753e-57 | -8.615850e-47 |
| Msa0115160 | Msa0936340 | 0.839781 | 1.290561e-57 | -8.615850e-47 |
| Msa0115160 | Msa0945110 | 0.806078 | 9.793907e-50 | -8.615850e-47 |
| Msa0115160 | Msa0961690 | 0.815843 | 7.511027e-52 | -8.615850e-47 |
| Msa0115160 | Msa1003030 | 0.824536 | 7.653893e-54 | -8.615850e-47 |
| Msa0115160 | Msa1012700 | 0.803728 | 3.034406e-49 | -8.615850e-47 |
| Msa0115160 | Msa1012810 | 0.839468 | 1.556014e-57 | -8.615850e-47 |
| Msa0115160 | Msa1013400 | 0.813058 | 3.101030e-51 | -8.615850e-47 |
| Msa0115160 | Msa1020510 | 0.804974 | 1.669223e-49 | -8.615850e-47 |
| Msa0115160 | Msa1037920 | 0.810086 | 1.372685e-50 | -8.615850e-47 |
| Msa0115160 | Msa1040400 | 0.801558 | 8.507937e-49 | -8.615850e-47 |
| Msa0115160 | Msa1041530 | 0.800109 | 1.681203e-48 | -8.615850e-47 |
| Msa0115160 | Msa1045140 | 0.803311 | 3.703931e-49 | -8.615850e-47 |
| Msa0115160 | Msa1048920 | 0.803787 | 2.950953e-49 | -8.615850e-47 |
| Msa0115160 | Msa1051830 | 0.803064 | 4.166986e-49 | -8.615850e-47 |
| Msa0115160 | Msa1054240 | 0.819421 | 1.171504e-52 | -8.615850e-47 |
| Msa0115160 | Msa1063950 | 0.806561 | 7.747214e-50 | -8.615850e-47 |
| Msa0115160 | Msa1066490 | 0.847436 | 1.157598e-59 | -8.615850e-47 |
| Msa0115160 | Msa1079230 | 0.810464 | 1.137683e-50 | -8.615850e-47 |
| Msa0115160 | Msa1081150 | 0.803197 | 3.910625e-49 | -8.615850e-47 |
| Msa0115160 | Msa1082700 | 0.806525 | 7.886506e-50 | -8.615850e-47 |
| Msa0115160 | Msa1085200 | 0.801747 | 7.783317e-49 | -8.615850e-47 |
| Msa0115160 | Msa1091520 | 0.816796 | 4.598132e-52 | -8.615850e-47 |
| Msa0115160 | Msa1093530 | 0.808460 | 3.064065e-50 | -8.615850e-47 |
| Msa0115160 | Msa1093840 | 0.817270 | 3.597630e-52 | -8.615850e-47 |
| Msa0115160 | Msa1094420 | 0.810642 | 1.041179e-50 | -8.615850e-47 |
| Msa0115160 | Msa1097640 | 0.841006 | 6.170569e-58 | -8.615850e-47 |
| Msa0115160 | Msa1104140 | 0.808305 | 3.305309e-50 | -8.615850e-47 |
| Msa0115160 | Msa1106700 | 0.825689 | 4.086720e-54 | -8.615850e-47 |
| Msa0115160 | Msa1113340 | 0.815969 | 7.041308e-52 | -8.615850e-47 |
| Msa0115160 | Msa1124110 | 0.847141 | 1.395437e-59 | -8.615850e-47 |
| Msa0115160 | Msa1126510 | 0.830882 | 2.285650e-55 | -8.615850e-47 |
| Msa0115160 | Msa1127140 | 0.804030 | 2.626596e-49 | -8.615850e-47 |
| Msa0115160 | Msa1127890 | 0.809926 | 1.486523e-50 | -8.615850e-47 |
| Msa0115160 | Msa1128710 | 0.800558 | 1.362221e-48 | -8.615850e-47 |
| Msa0115160 | Msa1129980 | 0.809808 | 1.575769e-50 | -8.615850e-47 |
| Msa0115160 | Msa1134110 | 0.802800 | 4.723750e-49 | -8.615850e-47 |
| Msa0115160 | Msa1139810 | 0.839634 | 1.409211e-57 | -8.615850e-47 |
| Msa0115160 | Msa1147900 | 0.819291 | 1.254226e-52 | -8.615850e-47 |
| Msa0115160 | Msa1151910 | 0.803376 | 3.591445e-49 | -8.615850e-47 |
| Msa0115160 | Msa1157870 | 0.811551 | 6.615530e-51 | -8.615850e-47 |
| Msa0115160 | Msa1165020 | 0.801040 | 1.085895e-48 | -8.615850e-47 |
| Msa0115160 | Msa1165870 | 0.813415 | 2.589390e-51 | -8.615850e-47 |
| Msa0115160 | Msa1166400 | 0.815008 | 1.151695e-51 | -8.615850e-47 |
| Msa0115160 | Msa1166860 | 0.806564 | 7.737659e-50 | -8.615850e-47 |
| Msa0115160 | Msa1168950 | 0.836211 | 1.068641e-56 | -8.615850e-47 |
| Msa0115160 | Msa1169040 | 0.839081 | 1.960952e-57 | -8.615850e-47 |
| Msa0115160 | Msa1173330 | 0.822534 | 2.250384e-53 | -8.615850e-47 |
| Msa0115160 | Msa1174530 | 0.816426 | 5.563144e-52 | -8.615850e-47 |
| Msa0115160 | Msa1182860 | 0.802184 | 6.328464e-49 | -8.615850e-47 |
| Msa0115160 | Msa1187840 | 0.802443 | 5.597705e-49 | -8.615850e-47 |
| Msa0115160 | Msa1196100 | 0.807647 | 4.564796e-50 | -8.615850e-47 |
| Msa0115160 | Msa1196440 | 0.802706 | 4.939744e-49 | -8.615850e-47 |
| Msa0115160 | Msa1200370 | 0.801980 | 6.971394e-49 | -8.615850e-47 |
| Msa0115160 | Msa1201650 | 0.829241 | 5.746230e-55 | -8.615850e-47 |
| Msa0115160 | Msa1202190 | 0.830196 | 3.364636e-55 | -8.615850e-47 |
| Msa0115160 | Msa1208890 | -0.808682 | 2.746445e-50 | -8.615850e-47 |
| Msa0115160 | Msa1209460 | 0.804015 | 2.646368e-49 | -8.615850e-47 |
| Msa0115160 | Msa1218600 | 0.814004 | 1.920662e-51 | -8.615850e-47 |
| Msa0115160 | Msa1224840 | 0.856028 | 4.242768e-62 | -8.615850e-47 |
| Msa0115160 | Msa1226620 | 0.820336 | 7.238727e-53 | -8.615850e-47 |
| Msa0115160 | Msa1232710 | 0.846166 | 2.576892e-59 | -8.615850e-47 |
| Msa0115160 | Msa1236100 | 0.834220 | 3.399395e-56 | -8.615850e-47 |
| Msa0115160 | Msa1251160 | 0.813939 | 1.985661e-51 | -8.615850e-47 |
| Msa0115160 | Msa1252190 | 0.847131 | 1.403854e-59 | -8.615850e-47 |
| Msa0115160 | Msa1253310 | 0.825420 | 4.734042e-54 | -8.615850e-47 |
| Msa0115160 | Msa1254610 | 0.827985 | 1.156044e-54 | -8.615850e-47 |
| Msa0115160 | Msa1256340 | 0.818298 | 2.108633e-52 | -8.615850e-47 |
| Msa0115160 | Msa1272900 | 0.801587 | 8.394424e-49 | -8.615850e-47 |
| Msa0115160 | Msa1274060 | 0.800948 | 1.133920e-48 | -8.615850e-47 |
| Msa0115160 | Msa1274280 | 0.820749 | 5.818011e-53 | -8.615850e-47 |
| Msa0115160 | Msa1276660 | 0.819053 | 1.421013e-52 | -8.615850e-47 |
| Msa0115160 | Msa1292830 | 0.848967 | 4.371924e-60 | -8.615850e-47 |
| Msa0115160 | Msa1294920 | 0.812327 | 4.483458e-51 | -8.615850e-47 |
| Msa0115160 | Msa1303250 | 0.817896 | 2.600171e-52 | -8.615850e-47 |
| Msa0115160 | Msa1304760 | 0.808630 | 2.818217e-50 | -8.615850e-47 |
| Msa0115160 | Msa1307570 | 0.815607 | 8.478137e-52 | -8.615850e-47 |
| Msa0115160 | Msa1307950 | 0.820592 | 6.321318e-53 | -8.615850e-47 |
| Msa0115160 | Msa1313300 | 0.849725 | 2.688374e-60 | -8.615850e-47 |
| Msa0115160 | Msa1333560 | 0.830777 | 2.425597e-55 | -8.615850e-47 |
| Msa0115160 | Msa1336120 | 0.800283 | 1.549673e-48 | -8.615850e-47 |
| Msa0115160 | Msa1351760 | 0.806761 | 7.030176e-50 | -8.615850e-47 |
| Msa0115160 | Msa1353060 | 0.813531 | 2.441349e-51 | -8.615850e-47 |
| Msa0115160 | Msa1356830 | 0.824448 | 8.030009e-54 | -8.615850e-47 |
| Msa0115160 | Msa1361400 | 0.813734 | 2.203317e-51 | -8.615850e-47 |
| Msa0115160 | Msa1363330 | 0.817958 | 2.517072e-52 | -8.615850e-47 |
| Msa0115160 | Msa1365150 | 0.814664 | 1.373197e-51 | -8.615850e-47 |
| Msa0115160 | Msa1367880 | 0.809318 | 2.007501e-50 | -8.615850e-47 |
| Msa0115160 | Msa1369150 | 0.815101 | 1.098491e-51 | -8.615850e-47 |
| Msa0115160 | Msa1373330 | 0.812193 | 4.794457e-51 | -8.615850e-47 |
| Msa0115160 | Msa1374040 | 0.835121 | 2.018123e-56 | -8.615850e-47 |
| Msa0115160 | Msa1374550 | 0.813510 | 2.467849e-51 | -8.615850e-47 |
| Msa0115160 | Msa1379760 | 0.807850 | 4.131918e-50 | -8.615850e-47 |
| Msa0115160 | Msa1382560 | 0.804807 | 1.809245e-49 | -8.615850e-47 |
| Msa0115160 | Msa1386600 | 0.817455 | 3.269257e-52 | -8.615850e-47 |
| Msa0115160 | Msa1406040 | 0.805098 | 1.572453e-49 | -8.615850e-47 |
| Msa0115160 | Msa1423350 | 0.810305 | 1.231586e-50 | -8.615850e-47 |
| Msa0115160 | Msa1430240 | 0.805994 | 1.020409e-49 | -8.615850e-47 |
| Msa0115160 | Msa1432950 | 0.822796 | 1.955287e-53 | -8.615850e-47 |
| Msa0115160 | Msa1437940 | 0.823925 | 1.065309e-53 | -8.615850e-47 |
| Msa0115160 | Msa1438740 | 0.810268 | 1.254470e-50 | -8.615850e-47 |
| Msa0115160 | Msa1440260 | -0.812297 | 4.550992e-51 | -8.615850e-47 |
| Msa0115160 | Msa1440960 | 0.811786 | 5.881404e-51 | -8.615850e-47 |
| Msa0115160 | Msa1443300 | 0.802715 | 4.917896e-49 | -8.615850e-47 |
| Msa0115160 | Msa1445190 | 0.818687 | 1.721172e-52 | -8.615850e-47 |
| Msa0115160 | Msa1446810 | 0.840717 | 7.348600e-58 | -8.615850e-47 |
| Msa0115160 | Msa1448690 | 0.811687 | 6.179994e-51 | -8.615850e-47 |
| Msa0115160 | Msa1449930 | 0.808901 | 2.466729e-50 | -8.615850e-47 |
| Msa0115160 | Msa1459380 | 0.847887 | 8.700084e-60 | -8.615850e-47 |
| Msa0115160 | Msa1466990 | 0.815264 | 1.010604e-51 | -8.615850e-47 |
PPI
| Gene1 | Gene2 | Type |
|---|
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa0115160 | MtrunA17_Chr1g0176101 | 99.176 | 364 | 3 | 0 | 1 | 364 | 1 | 364 | 0.0 | 754 |
| Msa0115160 | MtrunA17_Chr1g0207581 | 48.045 | 358 | 162 | 7 | 4 | 347 | 74 | 421 | 2.56e-112 | 335 |
| Msa0115160 | MtrunA17_Chr2g0309941 | 47.139 | 367 | 168 | 7 | 4 | 347 | 17 | 380 | 2.61e-112 | 332 |
| Msa0115160 | MtrunA17_Chr1g0152841 | 52.733 | 311 | 135 | 4 | 48 | 347 | 111 | 420 | 3.09e-111 | 332 |
| Msa0115160 | MtrunA17_Chr3g0134521 | 48.000 | 300 | 144 | 4 | 60 | 348 | 93 | 391 | 1.21e-99 | 301 |
| Msa0115160 | MtrunA17_Chr3g0112781 | 43.072 | 332 | 154 | 5 | 48 | 350 | 63 | 388 | 1.85e-90 | 278 |
| Msa0115160 | MtrunA17_Chr5g0436191 | 41.615 | 322 | 164 | 5 | 50 | 350 | 58 | 376 | 1.19e-84 | 263 |
| Msa0115160 | MtrunA17_Chr1g0154851 | 40.810 | 321 | 173 | 5 | 40 | 350 | 55 | 368 | 8.93e-75 | 236 |
| Msa0115160 | MtrunA17_Chr5g0403841 | 40.196 | 306 | 173 | 4 | 50 | 347 | 72 | 375 | 1.02e-70 | 225 |
| Msa0115160 | MtrunA17_Chr3g0141481 | 36.164 | 365 | 207 | 8 | 4 | 350 | 21 | 377 | 8.99e-70 | 223 |
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa0115160 | AT5G06610.1 | 61.003 | 359 | 133 | 5 | 1 | 354 | 1 | 357 | 1.12e-156 | 445 |
| Msa0115160 | AT3G19540.1 | 49.544 | 329 | 146 | 5 | 37 | 347 | 108 | 434 | 9.30e-113 | 337 |
| Msa0115160 | AT1G27690.1 | 47.671 | 365 | 172 | 5 | 4 | 350 | 49 | 412 | 1.06e-111 | 333 |
| Msa0115160 | AT1G49840.1 | 46.556 | 363 | 171 | 8 | 4 | 348 | 86 | 443 | 2.22e-108 | 326 |
| Msa0115160 | AT1G79420.1 | 42.674 | 389 | 175 | 8 | 4 | 350 | 20 | 402 | 9.38e-100 | 301 |
| Msa0115160 | AT5G05840.1 | 43.558 | 326 | 157 | 5 | 48 | 349 | 66 | 388 | 7.14e-92 | 282 |
| Msa0115160 | AT5G66740.1 | 40.181 | 331 | 181 | 6 | 32 | 347 | 38 | 366 | 2.16e-73 | 233 |
| Msa0115160 | AT3G55720.1 | 39.339 | 333 | 165 | 7 | 48 | 347 | 62 | 390 | 1.90e-70 | 227 |
| Msa0115160 | AT1G75160.1 | 40.193 | 311 | 168 | 8 | 55 | 350 | 87 | 394 | 2.77e-66 | 215 |
Find 101 sgRNAs with CRISPR-Local
Find 178 sgRNAs with CRISPR-GE
CRISPR-Local
| sgRNA_sequence | on_target_score | Position | Region |
|---|---|---|---|
| GAGTTCTAACCCACATATTC+TGG | 0.196819 | 1_3:+33937370 | Msa0115160:three_prime_UTR |
| GTTAATGGAACTTCAGAAAA+AGG | 0.220805 | 1_3:+33935747 | Msa0115160:CDS |
| ACCTCATTGAGGGGTGATTT+AGG | 0.222575 | 1_3:-33934840 | None:intergenic |
| AAAATGCTTCTTAGTGTTCT+TGG | 0.223207 | 1_3:+33934789 | Msa0115160:CDS |
| CTTTGTTTCAAGCTTAGATA+TGG | 0.243678 | 1_3:+33934614 | Msa0115160:exon |
| TCTGCACGGCTTGAGGGATT+AGG | 0.256741 | 1_3:+33937262 | Msa0115160:three_prime_UTR |
| TTGATAGGTTCTTCTGATAA+TGG | 0.264140 | 1_3:-33934648 | None:intergenic |
| GCACTAAAAGTCCATTTCTT+TGG | 0.271022 | 1_3:-33936784 | None:intergenic |
| TCCTCTTCGCCGTGCACTTC+AGG | 0.275448 | 1_3:+33935917 | Msa0115160:CDS |
| ATGATAAAACATGCTATCTT+TGG | 0.295748 | 1_3:+33936752 | Msa0115160:CDS |
| ATCTCTATCTGCCAATTATC+AGG | 0.310067 | 1_3:-33935795 | None:intergenic |
| GTCGGTGGTGGTGGTGTTAA+TGG | 0.312645 | 1_3:+33935732 | Msa0115160:CDS |
| CTGCACGGCTTGAGGGATTA+GGG | 0.324410 | 1_3:+33937263 | Msa0115160:three_prime_UTR |
| TAGGGACAAATCCTACATAT+TGG | 0.324957 | 1_3:+33936843 | Msa0115160:CDS |
| GCATGCATTGATTGTTAGTA+TGG | 0.341880 | 1_3:+33937410 | Msa0115160:three_prime_UTR |
| TCGTGTTCTGCACGGCTTGA+GGG | 0.355278 | 1_3:+33937256 | Msa0115160:three_prime_UTR |
| GAAACAAAGGAAAATGAAAA+TGG | 0.359062 | 1_3:-33934600 | None:intergenic |
| GGCAAATGGTTCCTGATAAT+TGG | 0.359506 | 1_3:+33935784 | Msa0115160:CDS |
| TTGACAAGGATTCAAGCAAT+AGG | 0.367414 | 1_3:+33936824 | Msa0115160:CDS |
| AGGGGTGATTTAGGATGAAT+AGG | 0.373094 | 1_3:-33934831 | None:intergenic |
| CTCGGTGTGCACGCTGCTAA+AGG | 0.374472 | 1_3:+33935885 | Msa0115160:CDS |
| GTCCACAACAACATCTTGAT+TGG | 0.384230 | 1_3:+33937092 | Msa0115160:CDS |
| CAACAATTCACAGCTGCAAC+AGG | 0.388041 | 1_3:+33935627 | Msa0115160:CDS |
| TACTACCAGCAAGAACCTTT+TGG | 0.394205 | 1_3:-33935830 | None:intergenic |
| AGGGACAAATCCTACATATT+GGG | 0.397990 | 1_3:+33936844 | Msa0115160:CDS |
| TGACAAGGATTCAAGCAATA+GGG | 0.405287 | 1_3:+33936825 | Msa0115160:CDS |
| TCAAAATATAACTCTAAGAA+AGG | 0.430604 | 1_3:+33934693 | Msa0115160:CDS |
| ATTGTTGTTTCCCAATATGT+AGG | 0.441158 | 1_3:-33936854 | None:intergenic |
| GGTGGCCAAAAGGTTCTTGC+TGG | 0.442056 | 1_3:+33935825 | Msa0115160:CDS |
| AAGGTTTGGTGATAATCTTA+AGG | 0.444872 | 1_3:+33936955 | Msa0115160:CDS |
| TACTTAACATGTATAATGAA+TGG | 0.446313 | 1_3:+33937330 | Msa0115160:three_prime_UTR |
| CTTGGATCGGTCGGTGGTGG+TGG | 0.446484 | 1_3:+33935723 | Msa0115160:CDS |
| GTGAAGAATGTGTTTGCAAC+CGG | 0.450494 | 1_3:+33935672 | Msa0115160:CDS |
| AGGATGGACCTGCTATTACT+AGG | 0.461843 | 1_3:+33936975 | Msa0115160:CDS |
| GCCTATTCTCGTGTTCTGCA+CGG | 0.465809 | 1_3:+33937248 | Msa0115160:three_prime_UTR |
| AGTTATGGATGAATTGGAGT+TGG | 0.469771 | 1_3:+33934721 | Msa0115160:CDS |
| AAAACTCTCAGCCGATCAAA+AGG | 0.470917 | 1_3:+33936697 | Msa0115160:CDS |
| AGTTCTAACCCACATATTCT+GGG | 0.472172 | 1_3:+33937371 | Msa0115160:three_prime_UTR |
| TGATTGTTTCTTACCACCTC+AGG | 0.473945 | 1_3:+33937054 | Msa0115160:CDS |
| TCTCCTACACCCAGAATATG+TGG | 0.475349 | 1_3:-33937380 | None:intergenic |
| GCCGTGCAGAACACGAGAAT+AGG | 0.477761 | 1_3:-33937249 | None:intergenic |
| GATTGTTGTTGGTGGCCAAA+AGG | 0.485888 | 1_3:+33935815 | Msa0115160:CDS |
| TTTGTTTCAAGCTTAGATAT+GGG | 0.486594 | 1_3:+33934615 | Msa0115160:exon |
| CAAAGGAAAATGAAAATGGT+TGG | 0.490005 | 1_3:-33934596 | None:intergenic |
| TGGCGTCACACACCTTGGCT+CGG | 0.492783 | 1_3:+33935867 | Msa0115160:CDS |
| CTCGTGTTCTGCACGGCTTG+AGG | 0.493692 | 1_3:+33937255 | Msa0115160:three_prime_UTR |
| GAGCTTGGATCGGTCGGTGG+TGG | 0.494261 | 1_3:+33935720 | Msa0115160:CDS |
| ATGGTTGTCGTGGACGAGCT+TGG | 0.495724 | 1_3:+33935705 | Msa0115160:CDS |
| GATTTAGGATGAATAGGAAC+AGG | 0.498652 | 1_3:-33934825 | None:intergenic |
| ATACAGCTGATACTGCTAAA+GGG | 0.506311 | 1_3:-33936616 | None:intergenic |
| GAAGACTATAGAGATGTTGA+TGG | 0.506980 | 1_3:+33936890 | Msa0115160:CDS |
| TCTGTTAAAGGTTTCGTCAT+CGG | 0.513334 | 1_3:+33935590 | Msa0115160:intron |
| TGCAACAGGGTGTAGGAAGT+TGG | 0.515412 | 1_3:+33935641 | Msa0115160:CDS |
| GATGTTGCATTTAATGTTCA+AGG | 0.515683 | 1_3:+33937022 | Msa0115160:CDS |
| GTAGTAACGGCACTATTGCT+TGG | 0.521284 | 1_3:+33935847 | Msa0115160:CDS |
| AAAAGAACTTACCTCATTGA+GGG | 0.521839 | 1_3:-33934850 | None:intergenic |
| TTTGGTGATAATCTTAAGGA+TGG | 0.522450 | 1_3:+33936959 | Msa0115160:CDS |
| AATACAGCTGATACTGCTAA+AGG | 0.523894 | 1_3:-33936617 | None:intergenic |
| TGGCAGATAGAGATTGTTGT+TGG | 0.528000 | 1_3:+33935804 | Msa0115160:CDS |
| GGTGTTATGATTGCACATGC+TGG | 0.531989 | 1_3:+33936911 | Msa0115160:CDS |
| AGGGATTAGGGTTGTGCACA+AGG | 0.532702 | 1_3:+33937275 | Msa0115160:three_prime_UTR |
| CAGATAGAGATTGTTGTTGG+TGG | 0.537302 | 1_3:+33935807 | Msa0115160:CDS |
| TTTCAAGCTTAGATATGGGT+AGG | 0.539926 | 1_3:+33934619 | Msa0115160:exon |
| CATATCTAAGCTTGAAACAA+AGG | 0.540284 | 1_3:-33934613 | None:intergenic |
| ACCTGCTATTACTAGGTTGG+AGG | 0.543898 | 1_3:+33936982 | Msa0115160:CDS |
| AAGGTTCTTGCTGGTAGTAA+CGG | 0.544977 | 1_3:+33935834 | Msa0115160:CDS |
| TCCTCCAACCTAGTAATAGC+AGG | 0.545025 | 1_3:-33936983 | None:intergenic |
| TGGACCTGCTATTACTAGGT+TGG | 0.556101 | 1_3:+33936979 | Msa0115160:CDS |
| TTACTAGGTTGGAGGAGTCA+TGG | 0.556437 | 1_3:+33936990 | Msa0115160:CDS |
| ACTGTGATGATAACAAGGTT+TGG | 0.564007 | 1_3:+33936941 | Msa0115160:CDS |
| TTGCTTGGCGTCACACACCT+TGG | 0.565443 | 1_3:+33935862 | Msa0115160:CDS |
| CAATCTTTGTTAAGTTCCTG+AGG | 0.573721 | 1_3:-33937070 | None:intergenic |
| TGTCGTGGACGAGCTTGGAT+CGG | 0.576957 | 1_3:+33935710 | Msa0115160:CDS |
| GCAGCGTGCACACCGAGCCA+AGG | 0.577284 | 1_3:-33935879 | None:intergenic |
| ATTCAGTGCAGCACAACACA+TGG | 0.578130 | 1_3:+33936637 | Msa0115160:CDS |
| GTGGACGAGCTTGGATCGGT+CGG | 0.581244 | 1_3:+33935714 | Msa0115160:CDS |
| ACCTGAAGTGCACGGCGAAG+AGG | 0.581794 | 1_3:-33935918 | None:intergenic |
| AACAGGGTGTAGGAAGTTGG+AGG | 0.584583 | 1_3:+33935644 | Msa0115160:CDS |
| CAACAACTGTGATGATAACA+AGG | 0.586246 | 1_3:+33936936 | Msa0115160:CDS |
| ATGTTGCATTTAATGTTCAA+GGG | 0.590841 | 1_3:+33937023 | Msa0115160:CDS |
| TTCAGTGCAGCACAACACAT+GGG | 0.596650 | 1_3:+33936638 | Msa0115160:CDS |
| CAGAACAGAACACACTTCAA+AGG | 0.599126 | 1_3:-33934567 | None:intergenic |
| TCACAGCTGCAACAGGGTGT+AGG | 0.606606 | 1_3:+33935634 | Msa0115160:CDS |
| AAAAGTGACAATGGTTGTCG+TGG | 0.609256 | 1_3:+33935695 | Msa0115160:CDS |
| CTCCTACACCCAGAATATGT+GGG | 0.613366 | 1_3:-33937379 | None:intergenic |
| GACGAGCTTGGATCGGTCGG+TGG | 0.615008 | 1_3:+33935717 | Msa0115160:CDS |
| TAGAGGACTCTTATTTGACA+AGG | 0.615017 | 1_3:+33936810 | Msa0115160:CDS |
| TCTTTGTTAAGTTCCTGAGG+TGG | 0.615936 | 1_3:-33937067 | None:intergenic |
| AACCCACATATTCTGGGTGT+AGG | 0.626622 | 1_3:+33937377 | Msa0115160:three_prime_UTR |
| TCCTAAATCACCCCTCAATG+AGG | 0.627312 | 1_3:+33934839 | Msa0115160:CDS |
| CTCCAATCAAGATGTTGTTG+TGG | 0.628883 | 1_3:-33937094 | None:intergenic |
| TCAGTGCAGCACAACACATG+GGG | 0.639092 | 1_3:+33936639 | Msa0115160:CDS |
| ACAGGGTGTAGGAAGTTGGA+GGG | 0.647737 | 1_3:+33935645 | Msa0115160:CDS |
| AACAATTCACAGCTGCAACA+GGG | 0.653620 | 1_3:+33935628 | Msa0115160:CDS |
| GATTGAACGAAGCGACAACA+CGG | 0.665874 | 1_3:+33936724 | Msa0115160:CDS |
| AAAGAACTTACCTCATTGAG+GGG | 0.670876 | 1_3:-33934849 | None:intergenic |
| ATGAACTTACCTGAAGTGCA+CGG | 0.677574 | 1_3:-33935926 | None:intergenic |
| GGTGTGCACGCTGCTAAAGG+CGG | 0.678174 | 1_3:+33935888 | Msa0115160:CDS |
| TGCAACCGGAAAAGTGACAA+TGG | 0.685929 | 1_3:+33935686 | Msa0115160:CDS |
| CAGGGTGTAGGAAGTTGGAG+GGG | 0.733318 | 1_3:+33935646 | Msa0115160:CDS |
| CAGTGCAGCACAACACATGG+GGG | 0.747483 | 1_3:+33936640 | Msa0115160:CDS |
CRISPR-GE
| badsite warning | sgRNA_sequence | Strand | Position | Region | GC_content |
|---|---|---|---|---|---|
| !! | ATAAACATTAATATTAAAAG+GGG | - | chr1_3:33935501-33935520 | None:intergenic | 10.0% |
| !! | TCATATATAAAAATAATTCA+TGG | + | chr1_3:33937140-33937159 | Msa0115160:three_prime_UTR | 10.0% |
| !!! | TTTTTTTAAACTTTTTAACT+AGG | + | chr1_3:33937168-33937187 | Msa0115160:three_prime_UTR | 10.0% |
| !!! | TAGTGTTATTTTATATAAAT+CGG | - | chr1_3:33937305-33937324 | None:intergenic | 10.0% |
| !! | CATAAAAATAAAAATTTGCA+TGG | - | chr1_3:33934915-33934934 | None:intergenic | 15.0% |
| !! | ATTTAGCAATATACTAAAAA+TGG | - | chr1_3:33935087-33935106 | None:intergenic | 15.0% |
| !!! | ATATTGCTAAATATTTTTGT+CGG | + | chr1_3:33935095-33935114 | Msa0115160:intron | 15.0% |
| !! | TTAGATATTTATCAAATCAT+AGG | - | chr1_3:33936506-33936525 | None:intergenic | 15.0% |
| !!! | ACAATTAATGTTTGTTTTTA+AGG | - | chr1_3:33936573-33936592 | None:intergenic | 15.0% |
| !!! | AGTGTTATTTTATATAAATC+GGG | - | chr1_3:33937304-33937323 | None:intergenic | 15.0% |
| !!! | TCAAAATATAACTCTAAGAA+AGG | + | chr1_3:33934693-33934712 | Msa0115160:CDS | 20.0% |
| !! | TAAAACATGAGTTCAAATTT+GGG | - | chr1_3:33935169-33935188 | None:intergenic | 20.0% |
| !! | TTAAAACATGAGTTCAAATT+TGG | - | chr1_3:33935170-33935189 | None:intergenic | 20.0% |
| !!! | TTTTTTCTTTACTTTTGGTT+TGG | - | chr1_3:33935202-33935221 | None:intergenic | 20.0% |
| !!! | AAGCATTTTTTCTTTACTTT+TGG | - | chr1_3:33935207-33935226 | None:intergenic | 20.0% |
| !! | GAAAAAATGCTTCTAATTAT+TGG | + | chr1_3:33935215-33935234 | Msa0115160:intron | 20.0% |
| !! | AAAATAAAGATCACTGAAAA+AGG | - | chr1_3:33935563-33935582 | None:intergenic | 20.0% |
| !!! | ATTTTGTTACAATCTGTTAA+AGG | + | chr1_3:33935578-33935597 | Msa0115160:intron | 20.0% |
| !!! | ATTTTGAATGTGATTGATTT+TGG | + | chr1_3:33935961-33935980 | Msa0115160:intron | 20.0% |
| !! | TAGTTGAAGGAAATTTATTA+GGG | - | chr1_3:33936417-33936436 | None:intergenic | 20.0% |
| !! | ATAGTTGAAGGAAATTTATT+AGG | - | chr1_3:33936418-33936437 | None:intergenic | 20.0% |
| !!! | TTAAACTTTTTAACTAGGTT+TGG | + | chr1_3:33937173-33937192 | Msa0115160:three_prime_UTR | 20.0% |
| !! | TACTTAACATGTATAATGAA+TGG | + | chr1_3:33937330-33937349 | Msa0115160:three_prime_UTR | 20.0% |
| ! | GAAACAAAGGAAAATGAAAA+TGG | - | chr1_3:33934603-33934622 | None:intergenic | 25.0% |
| ! | TTTGTTTCAAGCTTAGATAT+GGG | + | chr1_3:33934615-33934634 | Msa0115160:exon | 25.0% |
| !! | CTTTCATTTTCTTCATTGAT+AGG | - | chr1_3:33934666-33934685 | None:intergenic | 25.0% |
| !! | TGTTCTTTGTTGATTGAAAA+TGG | + | chr1_3:33935364-33935383 | Msa0115160:intron | 25.0% |
| !!! | ACTTTTAGCTAACTTTTTCA+AGG | - | chr1_3:33935400-33935419 | None:intergenic | 25.0% |
| !!! | AGCTAAAAGTGTTCAAATTT+AGG | + | chr1_3:33935410-33935429 | Msa0115160:intron | 25.0% |
| ! | TTACATATACATGGTAACAT+TGG | - | chr1_3:33935532-33935551 | None:intergenic | 25.0% |
| ! | GATCAAACTTTACATATACA+TGG | - | chr1_3:33935541-33935560 | None:intergenic | 25.0% |
| ! | TTAATGGAACTTCAGAAAAA+GGG | + | chr1_3:33935748-33935767 | Msa0115160:CDS | 25.0% |
| ! | TCACATTCAAAATCAAGTTT+AGG | - | chr1_3:33935954-33935973 | None:intergenic | 25.0% |
| !!! | AGAATTGATTTTGTGTCTAT+AGG | - | chr1_3:33936111-33936130 | None:intergenic | 25.0% |
| ! | TATAGACACAAAATCAATTC+TGG | + | chr1_3:33936110-33936129 | Msa0115160:intron | 25.0% |
| ! | CTAAATATAAAGCATGTGTT+TGG | - | chr1_3:33936147-33936166 | None:intergenic | 25.0% |
| ! | ACACATGCTTTATATTTAGT+TGG | + | chr1_3:33936148-33936167 | Msa0115160:intron | 25.0% |
| ! | GATAATGTGTTATGAACATA+TGG | + | chr1_3:33936193-33936212 | Msa0115160:intron | 25.0% |
| ! | AGAAAAAGACAAGAAAGTTT+AGG | - | chr1_3:33936457-33936476 | None:intergenic | 25.0% |
| !!! | TAATTGTAGTTTTGCTATGT+AGG | + | chr1_3:33936586-33936605 | Msa0115160:intron | 25.0% |
| !!! | AATTGTAGTTTTGCTATGTA+GGG | + | chr1_3:33936587-33936606 | Msa0115160:intron | 25.0% |
| ! | ATGATAAAACATGCTATCTT+TGG | + | chr1_3:33936752-33936771 | Msa0115160:CDS | 25.0% |
| ! | ATGTTGCATTTAATGTTCAA+GGG | + | chr1_3:33937023-33937042 | Msa0115160:CDS | 25.0% |
| CAAAGGAAAATGAAAATGGT+TGG | - | chr1_3:33934599-33934618 | None:intergenic | 30.0% | |
| CATATCTAAGCTTGAAACAA+AGG | - | chr1_3:33934616-33934635 | None:intergenic | 30.0% | |
| ! | CTTTGTTTCAAGCTTAGATA+TGG | + | chr1_3:33934614-33934633 | Msa0115160:exon | 30.0% |
| TTGATAGGTTCTTCTGATAA+TGG | - | chr1_3:33934651-33934670 | None:intergenic | 30.0% | |
| ! | CTAAGAAAGGTTTTCAGTTA+TGG | + | chr1_3:33934706-33934725 | Msa0115160:CDS | 30.0% |
| ! | GTTTTCAGTTATGGATGAAT+TGG | + | chr1_3:33934715-33934734 | Msa0115160:CDS | 30.0% |
| AAAATGCTTCTTAGTGTTCT+TGG | + | chr1_3:33934789-33934808 | Msa0115160:CDS | 30.0% | |
| AAAAGAACTTACCTCATTGA+GGG | - | chr1_3:33934853-33934872 | None:intergenic | 30.0% | |
| AAAAAGAACTTACCTCATTG+AGG | - | chr1_3:33934854-33934873 | None:intergenic | 30.0% | |
| !!! | TTTACTTTTGGTTTGGTTGA+AGG | - | chr1_3:33935195-33935214 | None:intergenic | 30.0% |
| GTTAATGGAACTTCAGAAAA+AGG | + | chr1_3:33935747-33935766 | Msa0115160:CDS | 30.0% | |
| ! | TATGAACATATGGTGATGTT+TGG | + | chr1_3:33936203-33936222 | Msa0115160:intron | 30.0% |
| ! | ATGTCATTTAACTACTGCTA+TGG | + | chr1_3:33936316-33936335 | Msa0115160:intron | 30.0% |
| AAGCAAATGATCCAATTCAT+TGG | - | chr1_3:33936394-33936413 | None:intergenic | 30.0% | |
| TGGTTAGATTGAATAGTTGA+AGG | - | chr1_3:33936430-33936449 | None:intergenic | 30.0% | |
| ! | TTCAATCAAGTCCTTTTGAT+CGG | - | chr1_3:33936711-33936730 | None:intergenic | 30.0% |
| ! | GATAGCATGTTTTATCATCT+CGG | - | chr1_3:33936750-33936769 | None:intergenic | 30.0% |
| !!! | GGTTATTTTAGCCAAAGAAA+TGG | + | chr1_3:33936773-33936792 | Msa0115160:CDS | 30.0% |
| !! | ATTGTTGTTTCCCAATATGT+AGG | - | chr1_3:33936857-33936876 | None:intergenic | 30.0% |
| !! | AAGGTTTGGTGATAATCTTA+AGG | + | chr1_3:33936955-33936974 | Msa0115160:CDS | 30.0% |
| ! | TTTGGTGATAATCTTAAGGA+TGG | + | chr1_3:33936959-33936978 | Msa0115160:CDS | 30.0% |
| GATGTTGCATTTAATGTTCA+AGG | + | chr1_3:33937022-33937041 | Msa0115160:CDS | 30.0% | |
| TTTCAAGCTTAGATATGGGT+AGG | + | chr1_3:33934619-33934638 | Msa0115160:exon | 35.0% | |
| AGTTATGGATGAATTGGAGT+TGG | + | chr1_3:33934721-33934740 | Msa0115160:CDS | 35.0% | |
| !!! | GAACACTAAGAAGCATTTTG+AGG | - | chr1_3:33934788-33934807 | None:intergenic | 35.0% |
| TGAATAGGAACAGGAAAAAG+AGG | - | chr1_3:33934819-33934838 | None:intergenic | 35.0% | |
| ! | GATTTAGGATGAATAGGAAC+AGG | - | chr1_3:33934828-33934847 | None:intergenic | 35.0% |
| AAAGAACTTACCTCATTGAG+GGG | - | chr1_3:33934852-33934871 | None:intergenic | 35.0% | |
| AACATGAGTTCAAATTTGGG+TGG | - | chr1_3:33935166-33935185 | None:intergenic | 35.0% | |
| GGATGGAATCAAATACTAGA+CGG | + | chr1_3:33935290-33935309 | Msa0115160:intron | 35.0% | |
| CAAATACTAGACGGTTTGAT+TGG | + | chr1_3:33935299-33935318 | Msa0115160:intron | 35.0% | |
| TCTGTTAAAGGTTTCGTCAT+CGG | + | chr1_3:33935590-33935609 | Msa0115160:intron | 35.0% | |
| !!! | AAAAAGGGTGTTTTGTGATG+TGG | + | chr1_3:33935763-33935782 | Msa0115160:CDS | 35.0% |
| ATCTCTATCTGCCAATTATC+AGG | - | chr1_3:33935798-33935817 | None:intergenic | 35.0% | |
| GACAAGAAAGTTTAGGAATG+TGG | - | chr1_3:33936450-33936469 | None:intergenic | 35.0% | |
| ATACAGCTGATACTGCTAAA+GGG | - | chr1_3:33936619-33936638 | None:intergenic | 35.0% | |
| AATACAGCTGATACTGCTAA+AGG | - | chr1_3:33936620-33936639 | None:intergenic | 35.0% | |
| GCACTAAAAGTCCATTTCTT+TGG | - | chr1_3:33936787-33936806 | None:intergenic | 35.0% | |
| ! | TAGAGGACTCTTATTTGACA+AGG | + | chr1_3:33936810-33936829 | Msa0115160:CDS | 35.0% |
| TTGACAAGGATTCAAGCAAT+AGG | + | chr1_3:33936824-33936843 | Msa0115160:CDS | 35.0% | |
| TGACAAGGATTCAAGCAATA+GGG | + | chr1_3:33936825-33936844 | Msa0115160:CDS | 35.0% | |
| TAGGGACAAATCCTACATAT+TGG | + | chr1_3:33936843-33936862 | Msa0115160:CDS | 35.0% | |
| AGGGACAAATCCTACATATT+GGG | + | chr1_3:33936844-33936863 | Msa0115160:CDS | 35.0% | |
| GAAGACTATAGAGATGTTGA+TGG | + | chr1_3:33936890-33936909 | Msa0115160:CDS | 35.0% | |
| CAACAACTGTGATGATAACA+AGG | + | chr1_3:33936936-33936955 | Msa0115160:CDS | 35.0% | |
| ACTGTGATGATAACAAGGTT+TGG | + | chr1_3:33936941-33936960 | Msa0115160:CDS | 35.0% | |
| CAATCTTTGTTAAGTTCCTG+AGG | - | chr1_3:33937073-33937092 | None:intergenic | 35.0% | |
| ! | AGTTCTAACCCACATATTCT+GGG | + | chr1_3:33937371-33937390 | Msa0115160:three_prime_UTR | 35.0% |
| !! | GCATGCATTGATTGTTAGTA+TGG | + | chr1_3:33937410-33937429 | Msa0115160:three_prime_UTR | 35.0% |
| CAGAACAGAACACACTTCAA+AGG | - | chr1_3:33934570-33934589 | None:intergenic | 40.0% | |
| ! | AGGGGTGATTTAGGATGAAT+AGG | - | chr1_3:33934834-33934853 | None:intergenic | 40.0% |
| AACAATTCACAGCTGCAACA+GGG | + | chr1_3:33935628-33935647 | Msa0115160:CDS | 40.0% | |
| GTGAAGAATGTGTTTGCAAC+CGG | + | chr1_3:33935672-33935691 | Msa0115160:CDS | 40.0% | |
| !!! | GACAACCATTGTCACTTTTC+CGG | - | chr1_3:33935694-33935713 | None:intergenic | 40.0% |
| AAAAGTGACAATGGTTGTCG+TGG | + | chr1_3:33935695-33935714 | Msa0115160:CDS | 40.0% | |
| ! | GTGTTTTGTGATGTGGCAAA+TGG | + | chr1_3:33935770-33935789 | Msa0115160:CDS | 40.0% |
| GGCAAATGGTTCCTGATAAT+TGG | + | chr1_3:33935784-33935803 | Msa0115160:CDS | 40.0% | |
| TGGCAGATAGAGATTGTTGT+TGG | + | chr1_3:33935804-33935823 | Msa0115160:CDS | 40.0% | |
| ! | CAGATAGAGATTGTTGTTGG+TGG | + | chr1_3:33935807-33935826 | Msa0115160:CDS | 40.0% |
| ! | TACTACCAGCAAGAACCTTT+TGG | - | chr1_3:33935833-33935852 | None:intergenic | 40.0% |
| AAGGTTCTTGCTGGTAGTAA+CGG | + | chr1_3:33935834-33935853 | Msa0115160:CDS | 40.0% | |
| ATGAACTTACCTGAAGTGCA+CGG | - | chr1_3:33935929-33935948 | None:intergenic | 40.0% | |
| AAACTTCAGCACTTCAACAC+AGG | + | chr1_3:33936351-33936370 | Msa0115160:intron | 40.0% | |
| ATGGGGGAGAAACAAATCAA+CGG | + | chr1_3:33936656-33936675 | Msa0115160:CDS | 40.0% | |
| AAAACTCTCAGCCGATCAAA+AGG | + | chr1_3:33936697-33936716 | Msa0115160:CDS | 40.0% | |
| ! | TGGACTTTTAGTGCACTTAG+AGG | + | chr1_3:33936793-33936812 | Msa0115160:CDS | 40.0% |
| ! | TGATTGTTTCTTACCACCTC+AGG | + | chr1_3:33937054-33937073 | Msa0115160:CDS | 40.0% |
| TCTTTGTTAAGTTCCTGAGG+TGG | - | chr1_3:33937070-33937089 | None:intergenic | 40.0% | |
| GTCCACAACAACATCTTGAT+TGG | + | chr1_3:33937092-33937111 | Msa0115160:CDS | 40.0% | |
| CTCCAATCAAGATGTTGTTG+TGG | - | chr1_3:33937097-33937116 | None:intergenic | 40.0% | |
| ! | GAGTTCTAACCCACATATTC+TGG | + | chr1_3:33937370-33937389 | Msa0115160:three_prime_UTR | 40.0% |
| TCCTAAATCACCCCTCAATG+AGG | + | chr1_3:33934839-33934858 | Msa0115160:CDS | 45.0% | |
| ACCTCATTGAGGGGTGATTT+AGG | - | chr1_3:33934843-33934862 | None:intergenic | 45.0% | |
| ATCCGAAGATTTCCTCAGGA+TGG | - | chr1_3:33935274-33935293 | None:intergenic | 45.0% | |
| ATCCTGAGGAAATCTTCGGA+TGG | + | chr1_3:33935273-33935292 | Msa0115160:intron | 45.0% | |
| TTCCATCCGAAGATTTCCTC+AGG | - | chr1_3:33935278-33935297 | None:intergenic | 45.0% | |
| CAACAATTCACAGCTGCAAC+AGG | + | chr1_3:33935627-33935646 | Msa0115160:CDS | 45.0% | |
| TGCAACCGGAAAAGTGACAA+TGG | + | chr1_3:33935686-33935705 | Msa0115160:CDS | 45.0% | |
| !! | GATTGTTGTTGGTGGCCAAA+AGG | + | chr1_3:33935815-33935834 | Msa0115160:CDS | 45.0% |
| GTAGTAACGGCACTATTGCT+TGG | + | chr1_3:33935847-33935866 | Msa0115160:CDS | 45.0% | |
| ATTCAGTGCAGCACAACACA+TGG | + | chr1_3:33936637-33936656 | Msa0115160:CDS | 45.0% | |
| TTCAGTGCAGCACAACACAT+GGG | + | chr1_3:33936638-33936657 | Msa0115160:CDS | 45.0% | |
| GATTGAACGAAGCGACAACA+CGG | + | chr1_3:33936724-33936743 | Msa0115160:CDS | 45.0% | |
| ! | GGTGTTATGATTGCACATGC+TGG | + | chr1_3:33936911-33936930 | Msa0115160:CDS | 45.0% |
| AGGATGGACCTGCTATTACT+AGG | + | chr1_3:33936975-33936994 | Msa0115160:CDS | 45.0% | |
| TGGACCTGCTATTACTAGGT+TGG | + | chr1_3:33936979-33936998 | Msa0115160:CDS | 45.0% | |
| ! | ACCTGCTATTACTAGGTTGG+AGG | + | chr1_3:33936982-33937001 | Msa0115160:CDS | 45.0% |
| TCCTCCAACCTAGTAATAGC+AGG | - | chr1_3:33936986-33937005 | None:intergenic | 45.0% | |
| ! | TTACTAGGTTGGAGGAGTCA+TGG | + | chr1_3:33936990-33937009 | Msa0115160:CDS | 45.0% |
| AACCCACATATTCTGGGTGT+AGG | + | chr1_3:33937377-33937396 | Msa0115160:three_prime_UTR | 45.0% | |
| CTCCTACACCCAGAATATGT+GGG | - | chr1_3:33937382-33937401 | None:intergenic | 45.0% | |
| TCTCCTACACCCAGAATATG+TGG | - | chr1_3:33937383-33937402 | None:intergenic | 45.0% | |
| !! | TATAAACATTAATATTAAAA+GGG | - | chr1_3:33935502-33935521 | None:intergenic | 5.0% |
| !! | TTATAAACATTAATATTAAA+AGG | - | chr1_3:33935503-33935522 | None:intergenic | 5.0% |
| !! | TTTAATATTAATGTTTATAA+TGG | + | chr1_3:33935503-33935522 | Msa0115160:intron | 5.0% |
| !! | AGCCTGAGGGCGAGTTTTAT+CGG | - | chr1_3:33935247-33935266 | None:intergenic | 50.0% |
| GAAGATTTCCTCAGGATGGC+CGG | - | chr1_3:33935270-33935289 | None:intergenic | 50.0% | |
| GGCCATCCTGAGGAAATCTT+CGG | + | chr1_3:33935269-33935288 | Msa0115160:intron | 50.0% | |
| TGCAACAGGGTGTAGGAAGT+TGG | + | chr1_3:33935641-33935660 | Msa0115160:CDS | 50.0% | |
| AACAGGGTGTAGGAAGTTGG+AGG | + | chr1_3:33935644-33935663 | Msa0115160:CDS | 50.0% | |
| ACAGGGTGTAGGAAGTTGGA+GGG | + | chr1_3:33935645-33935664 | Msa0115160:CDS | 50.0% | |
| CTAGCTGCAGGCCAATGAAT+TGG | + | chr1_3:33936380-33936399 | Msa0115160:intron | 50.0% | |
| TCAGTGCAGCACAACACATG+GGG | + | chr1_3:33936639-33936658 | Msa0115160:CDS | 50.0% | |
| GCCTATTCTCGTGTTCTGCA+CGG | + | chr1_3:33937248-33937267 | Msa0115160:three_prime_UTR | 50.0% | |
| AGGGATTAGGGTTGTGCACA+AGG | + | chr1_3:33937275-33937294 | Msa0115160:three_prime_UTR | 50.0% | |
| ACCCGATAAAACTCGCCCTC+AGG | + | chr1_3:33935242-33935261 | Msa0115160:intron | 55.0% | |
| !! | GCCTGAGGGCGAGTTTTATC+GGG | - | chr1_3:33935246-33935265 | None:intergenic | 55.0% |
| TAAAACTCGCCCTCAGGCTC+CGG | + | chr1_3:33935248-33935267 | Msa0115160:intron | 55.0% | |
| TCACAGCTGCAACAGGGTGT+AGG | + | chr1_3:33935634-33935653 | Msa0115160:CDS | 55.0% | |
| CAGGGTGTAGGAAGTTGGAG+GGG | + | chr1_3:33935646-33935665 | Msa0115160:CDS | 55.0% | |
| ATGGTTGTCGTGGACGAGCT+TGG | + | chr1_3:33935705-33935724 | Msa0115160:CDS | 55.0% | |
| TGTCGTGGACGAGCTTGGAT+CGG | + | chr1_3:33935710-33935729 | Msa0115160:CDS | 55.0% | |
| !! | GTCGGTGGTGGTGGTGTTAA+TGG | + | chr1_3:33935732-33935751 | Msa0115160:CDS | 55.0% |
| GGTGGCCAAAAGGTTCTTGC+TGG | + | chr1_3:33935825-33935844 | Msa0115160:CDS | 55.0% | |
| TTGCTTGGCGTCACACACCT+TGG | + | chr1_3:33935862-33935881 | Msa0115160:CDS | 55.0% | |
| CACAGGCATATGCTAGCTGC+AGG | + | chr1_3:33936368-33936387 | Msa0115160:intron | 55.0% | |
| CAGTGCAGCACAACACATGG+GGG | + | chr1_3:33936640-33936659 | Msa0115160:CDS | 55.0% | |
| GCCGTGCAGAACACGAGAAT+AGG | - | chr1_3:33937252-33937271 | None:intergenic | 55.0% | |
| TCGTGTTCTGCACGGCTTGA+GGG | + | chr1_3:33937256-33937275 | Msa0115160:three_prime_UTR | 55.0% | |
| TCTGCACGGCTTGAGGGATT+AGG | + | chr1_3:33937262-33937281 | Msa0115160:three_prime_UTR | 55.0% | |
| CTGCACGGCTTGAGGGATTA+GGG | + | chr1_3:33937263-33937282 | Msa0115160:three_prime_UTR | 55.0% | |
| GTGGACGAGCTTGGATCGGT+CGG | + | chr1_3:33935714-33935733 | Msa0115160:CDS | 60.0% | |
| TGGCGTCACACACCTTGGCT+CGG | + | chr1_3:33935867-33935886 | Msa0115160:CDS | 60.0% | |
| ! | CTCGGTGTGCACGCTGCTAA+AGG | + | chr1_3:33935885-33935904 | Msa0115160:CDS | 60.0% |
| GGTGTGCACGCTGCTAAAGG+CGG | + | chr1_3:33935888-33935907 | Msa0115160:CDS | 60.0% | |
| TCCTCTTCGCCGTGCACTTC+AGG | + | chr1_3:33935917-33935936 | Msa0115160:CDS | 60.0% | |
| ACCTGAAGTGCACGGCGAAG+AGG | - | chr1_3:33935921-33935940 | None:intergenic | 60.0% | |
| CTCGTGTTCTGCACGGCTTG+AGG | + | chr1_3:33937255-33937274 | Msa0115160:three_prime_UTR | 60.0% | |
| TCAGGATGGCCGGAGCCTGA+GGG | - | chr1_3:33935260-33935279 | None:intergenic | 65.0% | |
| GACGAGCTTGGATCGGTCGG+TGG | + | chr1_3:33935717-33935736 | Msa0115160:CDS | 65.0% | |
| GAGCTTGGATCGGTCGGTGG+TGG | + | chr1_3:33935720-33935739 | Msa0115160:CDS | 65.0% | |
| ! | CTTGGATCGGTCGGTGGTGG+TGG | + | chr1_3:33935723-33935742 | Msa0115160:CDS | 65.0% |
| CTCAGGATGGCCGGAGCCTG+AGG | - | chr1_3:33935261-33935280 | None:intergenic | 70.0% | |
| CTCAGGCTCCGGCCATCCTG+AGG | + | chr1_3:33935259-33935278 | Msa0115160:intron | 70.0% | |
| GCAGCGTGCACACCGAGCCA+AGG | - | chr1_3:33935882-33935901 | None:intergenic | 70.0% |
| Chromosome | Type | Strat | End | Strand | Name |
|---|---|---|---|---|---|
| chr1_3 | gene | 33934515 | 33937474 | 33934515 | ID=Msa0115160;Name=Msa0115160 |
| chr1_3 | mRNA | 33934515 | 33937474 | 33934515 | ID=Msa0115160-mRNA-1;Parent=Msa0115160;Name=Msa0115160-mRNA-1;_AED=0.01;_eAED=0.01;_QI=118|1|1|1|1|1|3|339|364 |
| chr1_3 | exon | 33934515 | 33934860 | 33934515 | ID=Msa0115160-mRNA-1:exon:10583;Parent=Msa0115160-mRNA-1 |
| chr1_3 | exon | 33935600 | 33935938 | 33935600 | ID=Msa0115160-mRNA-1:exon:10584;Parent=Msa0115160-mRNA-1 |
| chr1_3 | exon | 33936608 | 33937474 | 33936608 | ID=Msa0115160-mRNA-1:exon:10585;Parent=Msa0115160-mRNA-1 |
| chr1_3 | five_prime_UTR | 33934515 | 33934632 | 33934515 | ID=Msa0115160-mRNA-1:five_prime_utr;Parent=Msa0115160-mRNA-1 |
| chr1_3 | CDS | 33934633 | 33934860 | 33934633 | ID=Msa0115160-mRNA-1:cds;Parent=Msa0115160-mRNA-1 |
| chr1_3 | CDS | 33935600 | 33935938 | 33935600 | ID=Msa0115160-mRNA-1:cds;Parent=Msa0115160-mRNA-1 |
| chr1_3 | CDS | 33936608 | 33937135 | 33936608 | ID=Msa0115160-mRNA-1:cds;Parent=Msa0115160-mRNA-1 |
| chr1_3 | three_prime_UTR | 33937136 | 33937474 | 33937136 | ID=Msa0115160-mRNA-1:three_prime_utr;Parent=Msa0115160-mRNA-1 |
| Gene Sequence |
| Protein sequence |
