AlfalfaGEDB Alfalfa Gene Editing Database

M. sativa cultivar zhongmu-4 / Msa1242060

Query id Subject id identity % alignment length mismatches gap openings q. start q. end s. start s. end e-value bit score
Msa1242060 MtrunA17_Chr8g0354911 97.749 311 6 1 81 390 76 386 0.0 600
Msa1242060 MtrunA17_Chr3g0080381 71.154 312 87 2 82 390 91 402 3.16e-151 441
Msa1242060 MtrunA17_Chr7g0269511 41.493 335 151 10 70 387 29 335 6.40e-66 219
Msa1242060 MtrunA17_Chr7g0269521 37.821 312 169 8 83 387 40 333 6.85e-56 192
Msa1242060 MtrunA17_Chr7g0269531 40.317 315 157 11 83 387 43 336 7.25e-56 192
Msa1242060 MtrunA17_Chr1g0175661 38.462 312 166 9 83 387 37 329 2.08e-54 188
Msa1242060 MtrunA17_Chr1g0195331 36.624 314 171 10 83 387 32 326 2.41e-47 169
Msa1242060 MtrunA17_Chr1g0195351 36.306 314 172 10 83 387 32 326 1.07e-46 167
Msa1242060 MtrunA17_Chr1g0195301 36.306 314 172 10 83 387 32 326 1.10e-46 167
Msa1242060 MtrunA17_Chr1g0195321 36.306 314 172 10 83 387 32 326 1.10e-46 167
Msa1242060 MtrunA17_Chr1g0192331 33.022 321 170 7 70 387 18 296 1.10e-40 150
Msa1242060 MtrunA17_Chr4g0069881 32.581 310 161 10 83 390 44 307 1.70e-30 122
Msa1242060 MtrunA17_Chr7g0269541 29.126 309 188 9 82 388 48 327 4.70e-30 121
Msa1242060 MtrunA17_Chr7g0272151 28.743 334 177 12 83 393 63 358 3.57e-25 107
Msa1242060 MtrunA17_Chr2g0302021 33.068 251 118 10 148 391 92 299 4.11e-24 103
Msa1242060 MtrunA17_Chr1g0194081 28.659 328 205 9 66 387 31 335 5.94e-24 103
Msa1242060 MtrunA17_Chr7g0272141 29.762 252 153 6 140 391 98 325 7.44e-24 103
Msa1242060 MtrunA17_Chr3g0080391 30.094 319 180 12 77 388 68 350 2.67e-23 102
Msa1242060 MtrunA17_Chr8g0354901 29.316 307 185 8 83 387 80 356 4.97e-23 101
Msa1242060 MtrunA17_Chr7g0233771 31.984 247 120 7 145 386 118 321 7.68e-23 100
Msa1242060 MtrunA17_Chr1g0147051 29.080 337 189 12 74 391 76 381 1.16e-22 100
Msa1242060 MtrunA17_Chr4g0069891 30.739 257 130 7 145 387 143 365 3.66e-21 95.5
Msa1242060 MtrunA17_Chr8g0345281 30.032 313 186 10 82 386 71 358 4.51e-21 95.1
Msa1242060 MtrunA17_Chr8g0391311 27.964 329 164 12 82 388 35 312 9.34e-21 94.0
Msa1242060 MtrunA17_Chr4g0067611 26.316 323 173 9 83 387 63 338 4.06e-20 92.4
Msa1242060 MtrunA17_Chr1g0192311 26.190 336 202 9 60 386 39 337 4.97e-20 92.0
Msa1242060 MtrunA17_Chr1g0192281 26.190 336 202 9 60 386 39 337 4.97e-20 92.0
Msa1242060 MtrunA17_Chr4g0069861 28.710 310 141 12 95 387 41 287 5.29e-20 91.7
Msa1242060 MtrunA17_Chr7g0233831 29.960 247 125 6 145 386 119 322 7.92e-20 91.3
Msa1242060 MtrunA17_Chr8g0391281 28.399 331 170 15 82 394 33 314 3.31e-19 87.4
Msa1242060 MtrunA17_Chr1g0192321 26.087 322 208 9 74 386 51 351 3.88e-19 89.4
Msa1242060 MtrunA17_Chr1g0192301 25.455 330 184 8 74 386 58 342 2.04e-18 87.0
Msa1242060 MtrunA17_Chr4g0000121 25.926 324 190 9 74 386 40 324 2.35e-18 87.0
Msa1242060 MtrunA17_Chr8g0384121 26.074 326 198 9 65 386 42 328 2.45e-18 87.0
Msa1242060 MtrunA17_Chr1g0194091 29.104 268 120 10 148 387 108 333 2.51e-18 87.0
Msa1242060 MtrunA17_Chr4g0069841 28.623 276 141 9 122 391 65 290 4.88e-18 85.9
Msa1242060 MtrunA17_Chr7g0233801 28.112 249 121 7 148 386 121 321 7.17e-18 85.5
Msa1242060 MtrunA17_Chr7g0270691 26.752 314 185 9 83 387 43 320 8.31e-18 85.1
Msa1242060 MtrunA17_Chr4g0011791 29.114 316 145 13 83 386 33 281 9.11e-18 85.1
Msa1242060 MtrunA17_Chr3g0126771 27.988 343 196 12 66 391 63 371 1.11e-17 85.1
Msa1242060 MtrunA17_Chr8g0391291 26.220 328 169 12 82 387 33 309 4.22e-17 83.2
Msa1242060 MtrunA17_Chr4g0067601 27.103 321 175 11 83 388 63 339 6.43e-17 82.8
Msa1242060 MtrunA17_Chr4g0011751 30.000 250 130 8 138 387 55 259 2.00e-16 80.9
Msa1242060 MtrunA17_Chr7g0270651 26.807 332 178 12 83 387 46 339 2.21e-16 80.9
Msa1242060 MtrunA17_Chr4g0011771 32.051 312 144 14 83 386 32 283 5.15e-16 79.7
Msa1242060 MtrunA17_Chr7g0270661 27.108 332 177 10 83 387 46 339 6.19e-16 79.7
Msa1242060 MtrunA17_Chr7g0270671 27.108 332 177 10 83 387 46 339 6.19e-16 79.7
Msa1242060 MtrunA17_Chr8g0345211 27.711 332 172 13 75 387 72 354 9.03e-16 79.0
Msa1242060 MtrunA17_Chr7g0270631 26.398 322 192 13 83 387 582 875 1.54e-15 79.0
Msa1242060 MtrunA17_Chr7g0270631 25.075 335 186 11 83 390 34 330 1.05e-14 76.3
Msa1242060 MtrunA17_Chr4g0018371 30.802 237 115 10 167 388 107 309 2.38e-15 77.8
Msa1242060 MtrunA17_Chr2g0295531 25.079 315 179 12 83 388 47 313 3.26e-15 77.4
Msa1242060 MtrunA17_Chr5g0437831 47.297 74 36 1 305 378 74 144 8.93e-15 75.5
Msa1242060 MtrunA17_Chr2g0295541 25.234 321 188 13 83 393 60 338 2.22e-14 74.7
Msa1242060 MtrunA17_Chr7g0234731 36.538 104 61 2 286 389 219 317 3.11e-13 70.1
Msa1242060 MtrunA17_Chr8g0380581 45.361 97 47 3 295 387 53 147 4.09e-13 70.1
Msa1242060 MtrunA17_Chr3g0129921 25.826 333 198 13 68 388 35 330 4.32e-13 70.9
Msa1242060 MtrunA17_Chr3g0079361 36.893 103 60 2 286 388 200 297 1.06e-12 69.3
Msa1242060 MtrunA17_Chr3g0079341 36.893 103 60 2 286 388 200 297 1.37e-12 69.3
Msa1242060 MtrunA17_Chr2g0295551 24.611 321 190 13 83 393 60 338 1.47e-12 69.3
Msa1242060 MtrunA17_Chr3g0079351 36.893 103 60 2 286 388 200 297 1.71e-12 68.9
Msa1242060 MtrunA17_Chr3g0090091 35.922 103 61 2 286 388 201 298 4.00e-12 67.8
Msa1242060 MtrunA17_Chr2g0299431 40.000 85 47 2 305 388 53 134 2.50e-11 63.9
Query id Subject id identity % alignment length mismatches gap openings q. start q. end s. start s. end e-value bit score
Msa1242060 AT3G10720.2 49.482 386 175 10 11 387 12 386 1.68e-97 303
Msa1242060 AT5G04970.1 50.161 311 144 6 82 387 87 391 2.14e-96 301
Msa1242060 AT4G02330.1 36.646 322 185 7 78 388 30 343 2.22e-57 197
Msa1242060 AT1G02810.1 37.243 341 178 10 72 388 21 349 2.89e-53 186
Msa1242060 AT2G47550.1 36.607 336 190 8 54 387 15 329 2.70e-45 164
Msa1242060 AT2G26440.1 33.133 332 176 14 69 391 28 322 5.26e-28 115
Msa1242060 AT1G53840.1 30.539 334 188 11 65 387 61 361 3.57e-26 110
Msa1242060 AT4G33220.1 34.000 250 139 7 148 391 68 297 1.40e-23 102
Msa1242060 AT5G04960.1 30.909 330 172 15 68 387 55 338 4.91e-23 101
Msa1242060 AT5G27870.1 26.582 316 192 8 77 386 51 332 1.28e-22 100
Msa1242060 AT3G60730.1 31.532 222 126 5 179 391 89 293 3.83e-22 98.6
Msa1242060 AT3G43270.1 34.000 250 129 9 148 391 80 299 5.07e-22 98.2
Msa1242060 AT1G11580.2 30.165 242 131 5 147 386 142 347 5.55e-22 98.2
Msa1242060 AT3G14300.1 29.305 331 188 12 66 388 450 742 7.75e-22 98.6
Msa1242060 AT1G11580.1 30.165 242 131 5 147 386 121 326 8.93e-22 97.8
Msa1242060 AT2G26450.1 28.080 349 194 16 52 387 78 382 1.36e-21 97.4
Msa1242060 AT1G23200.1 30.030 333 178 10 82 391 37 337 1.50e-21 97.1
Msa1242060 AT4G02320.1 28.819 288 151 9 113 388 44 289 1.23e-20 94.0
Msa1242060 AT3G05610.1 24.765 319 195 7 83 393 62 343 1.28e-20 94.4
Msa1242060 AT4G33220.2 47.748 111 50 3 282 391 73 176 2.05e-20 92.8
Msa1242060 AT3G05620.1 27.245 323 189 10 80 391 38 325 4.41e-20 92.4
Msa1242060 AT5G53370.1 28.571 329 182 14 76 391 71 359 1.71e-19 90.9
Msa1242060 AT5G53370.2 28.571 329 182 14 76 391 107 395 1.94e-19 90.9
Msa1242060 AT4G02300.1 30.859 256 133 7 140 388 85 303 3.17e-19 90.1
Msa1242060 AT4G33230.1 30.097 309 182 12 83 387 99 377 1.55e-18 88.2
Msa1242060 AT1G53830.1 29.773 309 194 9 83 386 66 356 1.70e-18 87.8
Msa1242060 AT3G49220.2 28.221 326 179 13 80 393 133 415 1.07e-17 84.7
Msa1242060 AT3G10710.1 26.959 319 181 12 74 387 65 336 1.17e-17 85.1
Msa1242060 AT2G45220.1 52.326 86 34 2 301 386 204 282 2.01e-16 81.3
Msa1242060 AT1G11370.1 44.944 89 42 2 301 387 43 126 3.26e-16 79.0
Msa1242060 AT3G49220.3 27.059 340 191 13 64 391 121 415 4.56e-16 80.5
Msa1242060 AT3G49220.1 27.246 345 184 14 64 391 76 370 4.77e-16 80.5
Msa1242060 AT5G51490.1 24.204 314 194 9 78 388 33 305 1.52e-15 78.6
Msa1242060 AT3G06830.1 27.759 299 191 7 75 371 47 322 2.58e-15 78.2
Msa1242060 AT4G00190.1 45.238 84 45 1 304 387 165 247 7.93e-15 76.3
Msa1242060 AT3G47400.1 28.218 404 226 15 11 392 8 369 8.62e-15 76.6
Msa1242060 AT5G51500.1 37.500 104 60 2 285 388 211 309 1.04e-14 76.3
Msa1242060 AT2G43050.1 31.140 228 122 7 161 386 100 294 1.66e-14 75.5
Msa1242060 AT3G14310.1 26.300 327 212 9 72 386 52 361 5.41e-14 73.9
Msa1242060 AT5G09760.2 42.222 90 49 2 300 388 263 350 1.13e-12 70.1
Msa1242060 AT5G09760.1 42.222 90 49 2 300 388 237 324 1.24e-12 69.7
Msa1242060 AT4G03930.1 42.857 84 45 1 304 387 216 296 1.02e-11 67.0
Msa1242060 AT3G27980.1 42.169 83 45 1 304 386 189 268 1.21e-11 66.6
Msa1242060 AT5G64640.1 41.304 92 49 3 300 388 285 374 2.80e-11 65.5
Msa1242060 AT1G11590.1 42.169 83 45 1 304 386 216 295 4.26e-11 65.1

Find 73 sgRNAs with CRISPR-Local

Find 298 sgRNAs with CRISPR-GE


CRISPR-Local

CRISPR-Local
sgRNA_sequence on_target_score Position Region
AAGAAGAATATCTTGCTTAT+TGG 0.206210 8_2:-26096678 Msa1242060:CDS
ACAGAAAACTTCACTTCTAT+TGG 0.227904 8_2:-26096807 Msa1242060:CDS
CAGAAAACTTCACTTCTATT+GGG 0.284733 8_2:-26096806 Msa1242060:CDS
GAAGAAGAAGTAGGAGTAGA+AGG 0.331064 8_2:+26098694 None:intergenic
AGAATGGAACGACATAGTTT+TGG 0.342470 8_2:+26098646 None:intergenic
TATGTTATTGTGAGTCTTGA+TGG 0.346098 8_2:-26096831 Msa1242060:CDS
GAAGGAGGAGGAGAAGGAAT+AGG 0.359531 8_2:+26098724 None:intergenic
TAATGTTGATTTGCATGCTT+TGG 0.371872 8_2:+26098672 None:intergenic
GAAGGAGAAGGAGGAGGAGA+AGG 0.403223 8_2:+26098718 None:intergenic
TCTTCTGCCTTCAAATTATG+AGG 0.411265 8_2:+26096765 None:intergenic
TGAGGAAGAGGGAGAGAAGA+AGG 0.414287 8_2:+26098878 None:intergenic
AAGAAGAGGTTTGTGCTTGG+AGG 0.415972 8_2:+26098842 None:intergenic
GAGAAAGTCTTTGAATACTT+TGG 0.418166 8_2:+26098537 None:intergenic
TTTCTTATCTATGTCAAAGA+AGG 0.432591 8_2:-26096735 Msa1242060:CDS
CACCGATGTGTTGGTGGAAA+AGG 0.434972 8_2:-26098371 Msa1242060:CDS
AGCTGCACCTCATAATTTGA+AGG 0.439765 8_2:-26096772 Msa1242060:CDS
AAGAAGAAGAGGTTTGTGCT+TGG 0.440134 8_2:+26098839 None:intergenic
GGTTTGTGCTTGGAGGAGAA+AGG 0.445166 8_2:+26098849 None:intergenic
ATCGTCTAGTGCCGCAATCT+CGG 0.451993 8_2:+26098480 None:intergenic
GTTTGTGCTTGGAGGAGAAA+GGG 0.455442 8_2:+26098850 None:intergenic
GAAGGAGAAGGAGAATCAAA+AGG 0.458527 8_2:+26098784 None:intergenic
CTGACCTTGTAAGCCTTAGT+AGG 0.460092 8_2:+26098151 None:intergenic
GAAGGAGAAGGAGAAGGAGG+AGG 0.462044 8_2:+26098712 None:intergenic
ATATAGTATTTCACTTGGGT+TGG 0.476341 8_2:-26098230 Msa1242060:CDS
CAATTATATAGTATTTCACT+TGG 0.478234 8_2:-26098235 Msa1242060:CDS
CAAACAAGGTCTTCCTACTA+AGG 0.479222 8_2:-26098164 Msa1242060:CDS
CCTACGGACCCCTACCACTT+AGG 0.480195 8_2:-26098604 Msa1242060:CDS
GAAAGGGTGAAATGAGGAAG+AGG 0.481997 8_2:+26098866 None:intergenic
GGAAATCATAGTGTGGTAGA+TGG 0.488932 8_2:-26096627 Msa1242060:CDS
AGGAGAAGGAGAAGAAGAAG+AGG 0.495884 8_2:+26098828 None:intergenic
CATAATTTGAAGGCAGAAGA+TGG 0.495912 8_2:-26096762 Msa1242060:CDS
CATGCTTTGGAAGAAGAAGT+AGG 0.496496 8_2:+26098685 None:intergenic
GAAGGAATAGGAGAAGGAAA+AGG 0.496539 8_2:+26098736 None:intergenic
GAGAAGAAGGAGAACAATGA+AGG 0.497590 8_2:+26098891 None:intergenic
GAAGGAGAATCAAAAGGAGA+AGG 0.504673 8_2:+26098790 None:intergenic
GTAGAAGGAGAAGGAGAAGG+AGG 0.506935 8_2:+26098709 None:intergenic
ATCATAGTGTGGTAGATGGT+TGG 0.507535 8_2:-26096623 Msa1242060:CDS
AATATCTTGCTTATTGGTGA+TGG 0.511844 8_2:-26096672 Msa1242060:CDS
CGTAGGAGAGGAACGGATTG+AGG 0.513414 8_2:+26098621 None:intergenic
CTCAATCCGTTCCTCTCCTA+CGG 0.515534 8_2:-26098620 Msa1242060:CDS
GGAACGGATTGAGGAGAGAA+TGG 0.517254 8_2:+26098630 None:intergenic
GAAGAAGAATGAGAAGGAGA+AGG 0.521603 8_2:+26098766 None:intergenic
GAATGAGAAGGAGAAGGAGA+AGG 0.521603 8_2:+26098772 None:intergenic
GAAGAAGAATGAGAAGGAGA+AGG 0.521603 8_2:+26098814 None:intergenic
CTAAGTAATCTACATTGAGC+TGG 0.522297 8_2:+26098443 None:intergenic
CTCGGCATGGTTAAGAGAAG+TGG 0.523798 8_2:+26098498 None:intergenic
CTTAAAGAAAGCGAAAATAG+AGG 0.524153 8_2:-26096870 Msa1242060:CDS
GGAGGAGAAGGAATAGGAGA+AGG 0.525351 8_2:+26098730 None:intergenic
GGAGGAGAAAGGGTGAAATG+AGG 0.527635 8_2:+26098860 None:intergenic
GGAGTAGAAGGAGAAGGAGA+AGG 0.527720 8_2:+26098706 None:intergenic
GAAGTAGGAGTAGAAGGAGA+AGG 0.530923 8_2:+26098700 None:intergenic
TCTTCCTACTAAGGCTTACA+AGG 0.530926 8_2:-26098155 Msa1242060:CDS
ATTAACAAGACTTGCATCAC+AGG 0.533192 8_2:-26096648 Msa1242060:CDS
ATAGGAGAAGGAAAAGGAGA+AGG 0.551140 8_2:+26098742 None:intergenic
AAAGGGTGAAATGAGGAAGA+GGG 0.552911 8_2:+26098867 None:intergenic
GAAGGAGAAGAAGAATGAGA+AGG 0.552931 8_2:+26098760 None:intergenic
GAAGGAGAAGAAGAATGAGA+AGG 0.552931 8_2:+26098808 None:intergenic
TAACAACACCGATGTGTTGG+TGG 0.552935 8_2:-26098377 Msa1242060:CDS
CAGCTGATTTAAGTTCATCT+CGG 0.554463 8_2:+26098413 None:intergenic
CCTTTCGTGTCTAACACAGT+TGG 0.562336 8_2:+26096896 None:intergenic
AATTGTGTAACATTACTCAA+TGG 0.567088 8_2:+26098253 None:intergenic
AAAGGTTGAAGAATTAAAAG+TGG 0.571478 8_2:+26096599 None:intergenic
TCTTAACCATGCCGAGATTG+CGG 0.571735 8_2:-26098491 Msa1242060:CDS
AAGCGTAAGACTCGCAAACA+AGG 0.581727 8_2:-26098178 Msa1242060:CDS
CCTAAGTGGTAGGGGTCCGT+AGG 0.582317 8_2:+26098604 None:intergenic
AGAAAACTTCACTTCTATTG+GGG 0.587182 8_2:-26096805 Msa1242060:CDS
GTGGTAGGGGTCCGTAGGAG+AGG 0.593761 8_2:+26098609 None:intergenic
TGAAACTTATCTTAGTGCTG+TGG 0.613599 8_2:-26098347 Msa1242060:CDS
AATTATATAGTATTTCACTT+GGG 0.614742 8_2:-26098234 Msa1242060:CDS
CCAACTGTGTTAGACACGAA+AGG 0.647326 8_2:-26096896 Msa1242060:CDS
AGGGGTCCGTAGGAGAGGAA+CGG 0.660082 8_2:+26098614 None:intergenic
CATGGTTAAGAGAAGTGGAG+TGG 0.677604 8_2:+26098503 None:intergenic
CATCACAGGAAATCATAGTG+TGG 0.687415 8_2:-26096634 Msa1242060:CDS

CRISPR-GE

badsite warning sgRNA_sequence Strand Position Region GC_content
!! TTAATAAAAAAATAATAATA+AGG + chr8_2:26097409-26097428 None:intergenic 0.0%
!! TTAATAAAAAAATAATAATA+AGG + chr8_2:26097409-26097428 None:intergenic 0.0%
!! AATTATATAGTATTTCACTT+GGG - chr8_2:26097245-26097264 Msa1242060:intron 15.0%
!! TCAAAAATAAATATCATGTA+AGG + chr8_2:26097446-26097465 None:intergenic 15.0%
!! AAATATATGTAATGACTTTA+TGG - chr8_2:26097712-26097731 Msa1242060:intron 15.0%
!!! TTTTAATCCTTACATTTTTT+TGG + chr8_2:26097831-26097850 None:intergenic 15.0%
!! AAAAAATGTAAGGATTAAAA+TGG - chr8_2:26097831-26097850 Msa1242060:intron 15.0%
!!! CTAAAAAAAGTCTTTTTATT+TGG + chr8_2:26098004-26098023 None:intergenic 15.0%
!! ACATAAATTAAATGCATTTA+AGG + chr8_2:26098405-26098424 None:intergenic 15.0%
!! AATTATATAGTATTTCACTT+GGG - chr8_2:26097245-26097264 Msa1242060:intron 15.0%
!! TCAAAAATAAATATCATGTA+AGG + chr8_2:26097446-26097465 None:intergenic 15.0%
!! AAATATATGTAATGACTTTA+TGG - chr8_2:26097712-26097731 Msa1242060:intron 15.0%
!!! TTTTAATCCTTACATTTTTT+TGG + chr8_2:26097831-26097850 None:intergenic 15.0%
!! AAAAAATGTAAGGATTAAAA+TGG - chr8_2:26097831-26097850 Msa1242060:intron 15.0%
!!! CTAAAAAAAGTCTTTTTATT+TGG + chr8_2:26098004-26098023 None:intergenic 15.0%
!! ACATAAATTAAATGCATTTA+AGG + chr8_2:26098405-26098424 None:intergenic 15.0%
!!! AATCATTATACTTGTTTTGA+TGG - chr8_2:26097160-26097179 Msa1242060:intron 20.0%
!!! ATCATTATACTTGTTTTGAT+GGG - chr8_2:26097161-26097180 Msa1242060:intron 20.0%
!! CAATTATATAGTATTTCACT+TGG - chr8_2:26097244-26097263 Msa1242060:intron 20.0%
!!! TTAATTTAGTTCACATTTTG+AGG - chr8_2:26097684-26097703 Msa1242060:intron 20.0%
!!! TAATTTAGTTCACATTTTGA+GGG - chr8_2:26097685-26097704 Msa1242060:intron 20.0%
!! TAGTTAACCAAAAAAATGTA+AGG - chr8_2:26097821-26097840 Msa1242060:intron 20.0%
!! AATAAGTGTTAAAATGTCTT+CGG + chr8_2:26097903-26097922 None:intergenic 20.0%
!! AAAACTCGTATAAAATATCA+TGG - chr8_2:26097970-26097989 Msa1242060:intron 20.0%
!! ATTTAACAGTAACATTATGA+AGG - chr8_2:26098471-26098490 Msa1242060:CDS 20.0%
!!! AATCATTATACTTGTTTTGA+TGG - chr8_2:26097160-26097179 Msa1242060:intron 20.0%
!!! ATCATTATACTTGTTTTGAT+GGG - chr8_2:26097161-26097180 Msa1242060:intron 20.0%
!! CAATTATATAGTATTTCACT+TGG - chr8_2:26097244-26097263 Msa1242060:intron 20.0%
!!! TTAATTTAGTTCACATTTTG+AGG - chr8_2:26097684-26097703 Msa1242060:intron 20.0%
!!! TAATTTAGTTCACATTTTGA+GGG - chr8_2:26097685-26097704 Msa1242060:intron 20.0%
!! TAGTTAACCAAAAAAATGTA+AGG - chr8_2:26097821-26097840 Msa1242060:intron 20.0%
!! AATAAGTGTTAAAATGTCTT+CGG + chr8_2:26097903-26097922 None:intergenic 20.0%
!! AAAACTCGTATAAAATATCA+TGG - chr8_2:26097970-26097989 Msa1242060:intron 20.0%
!! ATTTAACAGTAACATTATGA+AGG - chr8_2:26098471-26098490 Msa1242060:CDS 20.0%
!! TTATTGAGAATTTTCCTAAG+TGG + chr8_2:26096892-26096911 None:intergenic 25.0%
!!! GAATACTTTGGATAGTTTTT+TGG + chr8_2:26096933-26096952 None:intergenic 25.0%
! AATTGTGTAACATTACTCAA+TGG + chr8_2:26097229-26097248 None:intergenic 25.0%
!!! ACCTTAATAAGCTTTTTAAG+TGG + chr8_2:26097358-26097377 None:intergenic 25.0%
!! CTTGGGTTATTGATTAAAAA+TGG + chr8_2:26097493-26097512 None:intergenic 25.0%
!! TTTTATAAAGCAATGCTCTT+GGG + chr8_2:26097510-26097529 None:intergenic 25.0%
!! ATTTTATAAAGCAATGCTCT+TGG + chr8_2:26097511-26097530 None:intergenic 25.0%
! AGCATTGCTTTATAAAATGT+GGG - chr8_2:26097513-26097532 Msa1242060:intron 25.0%
! CATTTGTCACATTGTAAATA+AGG + chr8_2:26097601-26097620 None:intergenic 25.0%
!!! CAAAATTTTGAGTAACACAA+GGG + chr8_2:26097642-26097661 None:intergenic 25.0%
! ACTAAACATTTAATTGCGTA+TGG + chr8_2:26098077-26098096 None:intergenic 25.0%
! ACGTAAAATATGTTAGTAAC+TGG - chr8_2:26098129-26098148 Msa1242060:CDS 25.0%
!!! AAGAAGAAGTTGATATAACT+GGG + chr8_2:26098320-26098339 None:intergenic 25.0%
!!! TAAGAAGAAGTTGATATAAC+TGG + chr8_2:26098321-26098340 None:intergenic 25.0%
! ATTATATACAAGATGACAAG+TGG + chr8_2:26098348-26098367 None:intergenic 25.0%
! TTTCTTATCTATGTCAAAGA+AGG - chr8_2:26098744-26098763 Msa1242060:CDS 25.0%
! AAGAAGAATATCTTGCTTAT+TGG - chr8_2:26098801-26098820 Msa1242060:CDS 25.0%
! AAAGGTTGAAGAATTAAAAG+TGG + chr8_2:26098883-26098902 None:intergenic 25.0%
!!! ACTTTTAATTCTTCAACCTT+TGG - chr8_2:26098882-26098901 Msa1242060:CDS 25.0%
!! GAAAAAATTTGACTTACCAA+AGG + chr8_2:26098901-26098920 None:intergenic 25.0%
!! TTATTGAGAATTTTCCTAAG+TGG + chr8_2:26096892-26096911 None:intergenic 25.0%
!!! GAATACTTTGGATAGTTTTT+TGG + chr8_2:26096933-26096952 None:intergenic 25.0%
! AATTGTGTAACATTACTCAA+TGG + chr8_2:26097229-26097248 None:intergenic 25.0%
!!! ACCTTAATAAGCTTTTTAAG+TGG + chr8_2:26097358-26097377 None:intergenic 25.0%
!! CTTGGGTTATTGATTAAAAA+TGG + chr8_2:26097493-26097512 None:intergenic 25.0%
!! TTTTATAAAGCAATGCTCTT+GGG + chr8_2:26097510-26097529 None:intergenic 25.0%
!! ATTTTATAAAGCAATGCTCT+TGG + chr8_2:26097511-26097530 None:intergenic 25.0%
! AGCATTGCTTTATAAAATGT+GGG - chr8_2:26097513-26097532 Msa1242060:intron 25.0%
! CATTTGTCACATTGTAAATA+AGG + chr8_2:26097601-26097620 None:intergenic 25.0%
!!! CAAAATTTTGAGTAACACAA+GGG + chr8_2:26097642-26097661 None:intergenic 25.0%
! ACTAAACATTTAATTGCGTA+TGG + chr8_2:26098077-26098096 None:intergenic 25.0%
! ACGTAAAATATGTTAGTAAC+TGG - chr8_2:26098129-26098148 Msa1242060:CDS 25.0%
!!! AAGAAGAAGTTGATATAACT+GGG + chr8_2:26098320-26098339 None:intergenic 25.0%
!!! TAAGAAGAAGTTGATATAAC+TGG + chr8_2:26098321-26098340 None:intergenic 25.0%
! ATTATATACAAGATGACAAG+TGG + chr8_2:26098348-26098367 None:intergenic 25.0%
! TTTCTTATCTATGTCAAAGA+AGG - chr8_2:26098744-26098763 Msa1242060:CDS 25.0%
! AAGAAGAATATCTTGCTTAT+TGG - chr8_2:26098801-26098820 Msa1242060:CDS 25.0%
! AAAGGTTGAAGAATTAAAAG+TGG + chr8_2:26098883-26098902 None:intergenic 25.0%
!!! ACTTTTAATTCTTCAACCTT+TGG - chr8_2:26098882-26098901 Msa1242060:CDS 25.0%
!! GAAAAAATTTGACTTACCAA+AGG + chr8_2:26098901-26098920 None:intergenic 25.0%
!! TAATGTTGATTTGCATGCTT+TGG + chr8_2:26096810-26096829 None:intergenic 30.0%
!!! ATAGTTTTTTGGCTTGTTTG+AGG + chr8_2:26096922-26096941 None:intergenic 30.0%
GAGAAAGTCTTTGAATACTT+TGG + chr8_2:26096945-26096964 None:intergenic 30.0%
!!! TTATACTTGTTTTGATGGGT+TGG - chr8_2:26097165-26097184 Msa1242060:intron 30.0%
ATATAGTATTTCACTTGGGT+TGG - chr8_2:26097249-26097268 Msa1242060:intron 30.0%
! ATTTTTACTCAAAGCTTGAG+TGG + chr8_2:26097275-26097294 None:intergenic 30.0%
GCCACTTAAAAAGCTTATTA+AGG - chr8_2:26097354-26097373 Msa1242060:intron 30.0%
! GAGCATTGCTTTATAAAATG+TGG - chr8_2:26097512-26097531 Msa1242060:intron 30.0%
GCATTGCTTTATAAAATGTG+GGG - chr8_2:26097514-26097533 Msa1242060:intron 30.0%
!! CCAAAATTTTGAGTAACACA+AGG + chr8_2:26097643-26097662 None:intergenic 30.0%
!! CCTTGTGTTACTCAAAATTT+TGG - chr8_2:26097640-26097659 Msa1242060:intron 30.0%
ATTAATAGTCCCATGATGTA+AGG + chr8_2:26097669-26097688 None:intergenic 30.0%
TAATGACTTTATGGCTAAGA+AGG - chr8_2:26097721-26097740 Msa1242060:intron 30.0%
AGAGACTAAACTTGAAAGAT+TGG - chr8_2:26097871-26097890 Msa1242060:intron 30.0%
ACTAAACTTGAAAGATTGGT+AGG - chr8_2:26097875-26097894 Msa1242060:intron 30.0%
AGAGCTAGAAGTTTAATTAG+TGG - chr8_2:26098098-26098117 Msa1242060:intron 30.0%
GAGCTAGAAGTTTAATTAGT+GGG - chr8_2:26098099-26098118 Msa1242060:intron 30.0%
TCAGAATTTAGCTAAAACCT+AGG + chr8_2:26098187-26098206 None:intergenic 30.0%
TTTGTTTGTTTGTGCCATAA+TGG - chr8_2:26098260-26098279 Msa1242060:CDS 30.0%
!! AGAAGAAGTTGATATAACTG+GGG + chr8_2:26098319-26098338 None:intergenic 30.0%
CTTAAAGAAAGCGAAAATAG+AGG - chr8_2:26098609-26098628 Msa1242060:CDS 30.0%
TATGTTATTGTGAGTCTTGA+TGG - chr8_2:26098648-26098667 Msa1242060:CDS 30.0%
ACAGAAAACTTCACTTCTAT+TGG - chr8_2:26098672-26098691 Msa1242060:CDS 30.0%
CAGAAAACTTCACTTCTATT+GGG - chr8_2:26098673-26098692 Msa1242060:CDS 30.0%
AGAAAACTTCACTTCTATTG+GGG - chr8_2:26098674-26098693 Msa1242060:CDS 30.0%
AATATCTTGCTTATTGGTGA+TGG - chr8_2:26098807-26098826 Msa1242060:CDS 30.0%
!! TAATGTTGATTTGCATGCTT+TGG + chr8_2:26096810-26096829 None:intergenic 30.0%
!!! ATAGTTTTTTGGCTTGTTTG+AGG + chr8_2:26096922-26096941 None:intergenic 30.0%
GAGAAAGTCTTTGAATACTT+TGG + chr8_2:26096945-26096964 None:intergenic 30.0%
!!! TTATACTTGTTTTGATGGGT+TGG - chr8_2:26097165-26097184 Msa1242060:intron 30.0%
ATATAGTATTTCACTTGGGT+TGG - chr8_2:26097249-26097268 Msa1242060:intron 30.0%
! ATTTTTACTCAAAGCTTGAG+TGG + chr8_2:26097275-26097294 None:intergenic 30.0%
GCCACTTAAAAAGCTTATTA+AGG - chr8_2:26097354-26097373 Msa1242060:intron 30.0%
! GAGCATTGCTTTATAAAATG+TGG - chr8_2:26097512-26097531 Msa1242060:intron 30.0%
GCATTGCTTTATAAAATGTG+GGG - chr8_2:26097514-26097533 Msa1242060:intron 30.0%
!! CCAAAATTTTGAGTAACACA+AGG + chr8_2:26097643-26097662 None:intergenic 30.0%
!! CCTTGTGTTACTCAAAATTT+TGG - chr8_2:26097640-26097659 Msa1242060:intron 30.0%
ATTAATAGTCCCATGATGTA+AGG + chr8_2:26097669-26097688 None:intergenic 30.0%
TAATGACTTTATGGCTAAGA+AGG - chr8_2:26097721-26097740 Msa1242060:intron 30.0%
AGAGACTAAACTTGAAAGAT+TGG - chr8_2:26097871-26097890 Msa1242060:intron 30.0%
ACTAAACTTGAAAGATTGGT+AGG - chr8_2:26097875-26097894 Msa1242060:intron 30.0%
AGAGCTAGAAGTTTAATTAG+TGG - chr8_2:26098098-26098117 Msa1242060:intron 30.0%
GAGCTAGAAGTTTAATTAGT+GGG - chr8_2:26098099-26098118 Msa1242060:intron 30.0%
TCAGAATTTAGCTAAAACCT+AGG + chr8_2:26098187-26098206 None:intergenic 30.0%
TTTGTTTGTTTGTGCCATAA+TGG - chr8_2:26098260-26098279 Msa1242060:CDS 30.0%
!! AGAAGAAGTTGATATAACTG+GGG + chr8_2:26098319-26098338 None:intergenic 30.0%
CTTAAAGAAAGCGAAAATAG+AGG - chr8_2:26098609-26098628 Msa1242060:CDS 30.0%
TATGTTATTGTGAGTCTTGA+TGG - chr8_2:26098648-26098667 Msa1242060:CDS 30.0%
ACAGAAAACTTCACTTCTAT+TGG - chr8_2:26098672-26098691 Msa1242060:CDS 30.0%
CAGAAAACTTCACTTCTATT+GGG - chr8_2:26098673-26098692 Msa1242060:CDS 30.0%
AGAAAACTTCACTTCTATTG+GGG - chr8_2:26098674-26098693 Msa1242060:CDS 30.0%
AATATCTTGCTTATTGGTGA+TGG - chr8_2:26098807-26098826 Msa1242060:CDS 30.0%
! AGAATGGAACGACATAGTTT+TGG + chr8_2:26096836-26096855 None:intergenic 35.0%
! AGAATTTTCCTAAGTGGTAG+GGG + chr8_2:26096886-26096905 None:intergenic 35.0%
! GAGAATTTTCCTAAGTGGTA+GGG + chr8_2:26096887-26096906 None:intergenic 35.0%
! TGAGAATTTTCCTAAGTGGT+AGG + chr8_2:26096888-26096907 None:intergenic 35.0%
CTAAGTAATCTACATTGAGC+TGG + chr8_2:26097039-26097058 None:intergenic 35.0%
! CAGCTGATTTAAGTTCATCT+CGG + chr8_2:26097069-26097088 None:intergenic 35.0%
! TTTTAACAACACCGATGTGT+TGG - chr8_2:26097099-26097118 Msa1242060:intron 35.0%
TGAAACTTATCTTAGTGCTG+TGG - chr8_2:26097132-26097151 Msa1242060:intron 35.0%
TGTGGGGATTAAAATGATCT+TGG - chr8_2:26097530-26097549 Msa1242060:intron 35.0%
!! ATTTTGGAAGCCTTACATCA+TGG - chr8_2:26097656-26097675 Msa1242060:intron 35.0%
!! TTTTGGAAGCCTTACATCAT+GGG - chr8_2:26097657-26097676 Msa1242060:intron 35.0%
TTAAAGTCTCTCCTTCTAAG+AGG - chr8_2:26097785-26097804 Msa1242060:intron 35.0%
TAACAAGTTTGCCTCTTAGA+AGG + chr8_2:26097799-26097818 None:intergenic 35.0%
! AGAGATTAGTCACTGTTGAA+CGG - chr8_2:26097941-26097960 Msa1242060:intron 35.0%
!! TCCAAGGATTGGTTAAATTC+TGG - chr8_2:26098157-26098176 Msa1242060:CDS 35.0%
ACCAGAATTTAACCAATCCT+TGG + chr8_2:26098161-26098180 None:intergenic 35.0%
AAACTTTATGATCAGTCACG+TGG - chr8_2:26098218-26098237 Msa1242060:CDS 35.0%
TCTTCTGCCTTCAAATTATG+AGG + chr8_2:26098717-26098736 None:intergenic 35.0%
CATAATTTGAAGGCAGAAGA+TGG - chr8_2:26098717-26098736 Msa1242060:CDS 35.0%
ATTAACAAGACTTGCATCAC+AGG - chr8_2:26098831-26098850 Msa1242060:CDS 35.0%
! AGAATGGAACGACATAGTTT+TGG + chr8_2:26096836-26096855 None:intergenic 35.0%
! AGAATTTTCCTAAGTGGTAG+GGG + chr8_2:26096886-26096905 None:intergenic 35.0%
! GAGAATTTTCCTAAGTGGTA+GGG + chr8_2:26096887-26096906 None:intergenic 35.0%
! TGAGAATTTTCCTAAGTGGT+AGG + chr8_2:26096888-26096907 None:intergenic 35.0%
CTAAGTAATCTACATTGAGC+TGG + chr8_2:26097039-26097058 None:intergenic 35.0%
! CAGCTGATTTAAGTTCATCT+CGG + chr8_2:26097069-26097088 None:intergenic 35.0%
! TTTTAACAACACCGATGTGT+TGG - chr8_2:26097099-26097118 Msa1242060:intron 35.0%
TGAAACTTATCTTAGTGCTG+TGG - chr8_2:26097132-26097151 Msa1242060:intron 35.0%
TGTGGGGATTAAAATGATCT+TGG - chr8_2:26097530-26097549 Msa1242060:intron 35.0%
!! ATTTTGGAAGCCTTACATCA+TGG - chr8_2:26097656-26097675 Msa1242060:intron 35.0%
!! TTTTGGAAGCCTTACATCAT+GGG - chr8_2:26097657-26097676 Msa1242060:intron 35.0%
TTAAAGTCTCTCCTTCTAAG+AGG - chr8_2:26097785-26097804 Msa1242060:intron 35.0%
TAACAAGTTTGCCTCTTAGA+AGG + chr8_2:26097799-26097818 None:intergenic 35.0%
! AGAGATTAGTCACTGTTGAA+CGG - chr8_2:26097941-26097960 Msa1242060:intron 35.0%
!! TCCAAGGATTGGTTAAATTC+TGG - chr8_2:26098157-26098176 Msa1242060:CDS 35.0%
ACCAGAATTTAACCAATCCT+TGG + chr8_2:26098161-26098180 None:intergenic 35.0%
AAACTTTATGATCAGTCACG+TGG - chr8_2:26098218-26098237 Msa1242060:CDS 35.0%
TCTTCTGCCTTCAAATTATG+AGG + chr8_2:26098717-26098736 None:intergenic 35.0%
CATAATTTGAAGGCAGAAGA+TGG - chr8_2:26098717-26098736 Msa1242060:CDS 35.0%
ATTAACAAGACTTGCATCAC+AGG - chr8_2:26098831-26098850 Msa1242060:CDS 35.0%
GAGAAGAAGGAGAACAATGA+AGG + chr8_2:26096591-26096610 None:intergenic 40.0%
AAAGGGTGAAATGAGGAAGA+GGG + chr8_2:26096615-26096634 None:intergenic 40.0%
AAGAAGAAGAGGTTTGTGCT+TGG + chr8_2:26096643-26096662 None:intergenic 40.0%
GAAGAAGAATGAGAAGGAGA+AGG + chr8_2:26096668-26096687 None:intergenic 40.0%
GAAGGAGAAGAAGAATGAGA+AGG + chr8_2:26096674-26096693 None:intergenic 40.0%
GAAGGAGAATCAAAAGGAGA+AGG + chr8_2:26096692-26096711 None:intergenic 40.0%
GAAGGAGAAGGAGAATCAAA+AGG + chr8_2:26096698-26096717 None:intergenic 40.0%
GAAGAAGAATGAGAAGGAGA+AGG + chr8_2:26096668-26096687 None:intergenic 40.0%
GAAGGAGAAGAAGAATGAGA+AGG + chr8_2:26096674-26096693 None:intergenic 40.0%
ATAGGAGAAGGAAAAGGAGA+AGG + chr8_2:26096740-26096759 None:intergenic 40.0%
GAAGGAATAGGAGAAGGAAA+AGG + chr8_2:26096746-26096765 None:intergenic 40.0%
GAAGAAGAAGTAGGAGTAGA+AGG + chr8_2:26096788-26096807 None:intergenic 40.0%
!! CATGCTTTGGAAGAAGAAGT+AGG + chr8_2:26096797-26096816 None:intergenic 40.0%
! AACCTTTTCCACCAACACAT+CGG + chr8_2:26097113-26097132 None:intergenic 40.0%
CAAACAAGGTCTTCCTACTA+AGG - chr8_2:26097315-26097334 Msa1242060:intron 40.0%
TCTTCCTACTAAGGCTTACA+AGG - chr8_2:26097324-26097343 Msa1242060:intron 40.0%
!! TAATTGCGTATGGCTCTAAG+TGG + chr8_2:26098067-26098086 None:intergenic 40.0%
TTAGTAACTGGCTAGATCCA+AGG - chr8_2:26098141-26098160 Msa1242060:CDS 40.0%
GGTTAAATTCTGGTCAACCT+AGG - chr8_2:26098167-26098186 Msa1242060:CDS 40.0%
TGCACGTGTTCTTTCCATTA+TGG + chr8_2:26098277-26098296 None:intergenic 40.0%
!! AAGTTGATATAACTGGGGTG+GGG + chr8_2:26098314-26098333 None:intergenic 40.0%
!! GAAGTTGATATAACTGGGGT+GGG + chr8_2:26098315-26098334 None:intergenic 40.0%
!! AGAAGTTGATATAACTGGGG+TGG + chr8_2:26098316-26098335 None:intergenic 40.0%
AGCTGCACCTCATAATTTGA+AGG - chr8_2:26098707-26098726 Msa1242060:CDS 40.0%
CATCACAGGAAATCATAGTG+TGG - chr8_2:26098845-26098864 Msa1242060:CDS 40.0%
GGAAATCATAGTGTGGTAGA+TGG - chr8_2:26098852-26098871 Msa1242060:CDS 40.0%
ATCATAGTGTGGTAGATGGT+TGG - chr8_2:26098856-26098875 Msa1242060:CDS 40.0%
GAGAAGAAGGAGAACAATGA+AGG + chr8_2:26096591-26096610 None:intergenic 40.0%
AAAGGGTGAAATGAGGAAGA+GGG + chr8_2:26096615-26096634 None:intergenic 40.0%
AAGAAGAAGAGGTTTGTGCT+TGG + chr8_2:26096643-26096662 None:intergenic 40.0%
GAAGAAGAATGAGAAGGAGA+AGG + chr8_2:26096668-26096687 None:intergenic 40.0%
GAAGGAGAAGAAGAATGAGA+AGG + chr8_2:26096674-26096693 None:intergenic 40.0%
GAAGGAGAATCAAAAGGAGA+AGG + chr8_2:26096692-26096711 None:intergenic 40.0%
GAAGGAGAAGGAGAATCAAA+AGG + chr8_2:26096698-26096717 None:intergenic 40.0%
GAAGAAGAATGAGAAGGAGA+AGG + chr8_2:26096668-26096687 None:intergenic 40.0%
GAAGGAGAAGAAGAATGAGA+AGG + chr8_2:26096674-26096693 None:intergenic 40.0%
ATAGGAGAAGGAAAAGGAGA+AGG + chr8_2:26096740-26096759 None:intergenic 40.0%
GAAGGAATAGGAGAAGGAAA+AGG + chr8_2:26096746-26096765 None:intergenic 40.0%
GAAGAAGAAGTAGGAGTAGA+AGG + chr8_2:26096788-26096807 None:intergenic 40.0%
!! CATGCTTTGGAAGAAGAAGT+AGG + chr8_2:26096797-26096816 None:intergenic 40.0%
! AACCTTTTCCACCAACACAT+CGG + chr8_2:26097113-26097132 None:intergenic 40.0%
CAAACAAGGTCTTCCTACTA+AGG - chr8_2:26097315-26097334 Msa1242060:intron 40.0%
TCTTCCTACTAAGGCTTACA+AGG - chr8_2:26097324-26097343 Msa1242060:intron 40.0%
!! TAATTGCGTATGGCTCTAAG+TGG + chr8_2:26098067-26098086 None:intergenic 40.0%
TTAGTAACTGGCTAGATCCA+AGG - chr8_2:26098141-26098160 Msa1242060:CDS 40.0%
GGTTAAATTCTGGTCAACCT+AGG - chr8_2:26098167-26098186 Msa1242060:CDS 40.0%
TGCACGTGTTCTTTCCATTA+TGG + chr8_2:26098277-26098296 None:intergenic 40.0%
!! AAGTTGATATAACTGGGGTG+GGG + chr8_2:26098314-26098333 None:intergenic 40.0%
!! GAAGTTGATATAACTGGGGT+GGG + chr8_2:26098315-26098334 None:intergenic 40.0%
!! AGAAGTTGATATAACTGGGG+TGG + chr8_2:26098316-26098335 None:intergenic 40.0%
AGCTGCACCTCATAATTTGA+AGG - chr8_2:26098707-26098726 Msa1242060:CDS 40.0%
CATCACAGGAAATCATAGTG+TGG - chr8_2:26098845-26098864 Msa1242060:CDS 40.0%
GGAAATCATAGTGTGGTAGA+TGG - chr8_2:26098852-26098871 Msa1242060:CDS 40.0%
ATCATAGTGTGGTAGATGGT+TGG - chr8_2:26098856-26098875 Msa1242060:CDS 40.0%
GAAAGGGTGAAATGAGGAAG+AGG + chr8_2:26096616-26096635 None:intergenic 45.0%
GTTTGTGCTTGGAGGAGAAA+GGG + chr8_2:26096632-26096651 None:intergenic 45.0%
AAGAAGAGGTTTGTGCTTGG+AGG + chr8_2:26096640-26096659 None:intergenic 45.0%
AGGAGAAGGAGAAGAAGAAG+AGG + chr8_2:26096654-26096673 None:intergenic 45.0%
GAATGAGAAGGAGAAGGAGA+AGG + chr8_2:26096662-26096681 None:intergenic 45.0%
GAAGTAGGAGTAGAAGGAGA+AGG + chr8_2:26096782-26096801 None:intergenic 45.0%
CATGGTTAAGAGAAGTGGAG+TGG + chr8_2:26096979-26096998 None:intergenic 45.0%
TCTTAACCATGCCGAGATTG+CGG - chr8_2:26096988-26097007 Msa1242060:intron 45.0%
TAACAACACCGATGTGTTGG+TGG - chr8_2:26097102-26097121 Msa1242060:intron 45.0%
AAGCGTAAGACTCGCAAACA+AGG - chr8_2:26097301-26097320 Msa1242060:intron 45.0%
CTGACCTTGTAAGCCTTAGT+AGG + chr8_2:26097331-26097350 None:intergenic 45.0%
TGTGAGATGAGTGAGCACAA+TGG + chr8_2:26097750-26097769 None:intergenic 45.0%
ATTGTGCTCACTCATCTCAC+AGG - chr8_2:26097749-26097768 Msa1242060:intron 45.0%
TTGTGCTCACTCATCTCACA+GGG - chr8_2:26097750-26097769 Msa1242060:intron 45.0%
AACTGGCTAGATCCAAGGAT+TGG - chr8_2:26098146-26098165 Msa1242060:CDS 45.0%
CCTTTCGTGTCTAACACAGT+TGG + chr8_2:26098586-26098605 None:intergenic 45.0%
CCAACTGTGTTAGACACGAA+AGG - chr8_2:26098583-26098602 Msa1242060:CDS 45.0%
GAAAGGGTGAAATGAGGAAG+AGG + chr8_2:26096616-26096635 None:intergenic 45.0%
GTTTGTGCTTGGAGGAGAAA+GGG + chr8_2:26096632-26096651 None:intergenic 45.0%
AAGAAGAGGTTTGTGCTTGG+AGG + chr8_2:26096640-26096659 None:intergenic 45.0%
AGGAGAAGGAGAAGAAGAAG+AGG + chr8_2:26096654-26096673 None:intergenic 45.0%
GAATGAGAAGGAGAAGGAGA+AGG + chr8_2:26096662-26096681 None:intergenic 45.0%
GAAGTAGGAGTAGAAGGAGA+AGG + chr8_2:26096782-26096801 None:intergenic 45.0%
CATGGTTAAGAGAAGTGGAG+TGG + chr8_2:26096979-26096998 None:intergenic 45.0%
TCTTAACCATGCCGAGATTG+CGG - chr8_2:26096988-26097007 Msa1242060:intron 45.0%
TAACAACACCGATGTGTTGG+TGG - chr8_2:26097102-26097121 Msa1242060:intron 45.0%
AAGCGTAAGACTCGCAAACA+AGG - chr8_2:26097301-26097320 Msa1242060:intron 45.0%
CTGACCTTGTAAGCCTTAGT+AGG + chr8_2:26097331-26097350 None:intergenic 45.0%
TGTGAGATGAGTGAGCACAA+TGG + chr8_2:26097750-26097769 None:intergenic 45.0%
ATTGTGCTCACTCATCTCAC+AGG - chr8_2:26097749-26097768 Msa1242060:intron 45.0%
TTGTGCTCACTCATCTCACA+GGG - chr8_2:26097750-26097769 Msa1242060:intron 45.0%
AACTGGCTAGATCCAAGGAT+TGG - chr8_2:26098146-26098165 Msa1242060:CDS 45.0%
CCTTTCGTGTCTAACACAGT+TGG + chr8_2:26098586-26098605 None:intergenic 45.0%
CCAACTGTGTTAGACACGAA+AGG - chr8_2:26098583-26098602 Msa1242060:CDS 45.0%
!!! TAATTGTTTTTTAATTTTTT+TGG + chr8_2:26098376-26098395 None:intergenic 5.0%
!!! TAATTGTTTTTTAATTTTTT+TGG + chr8_2:26098376-26098395 None:intergenic 5.0%
TGAGGAAGAGGGAGAGAAGA+AGG + chr8_2:26096604-26096623 None:intergenic 50.0%
GGAGGAGAAAGGGTGAAATG+AGG + chr8_2:26096622-26096641 None:intergenic 50.0%
GGTTTGTGCTTGGAGGAGAA+AGG + chr8_2:26096633-26096652 None:intergenic 50.0%
GGAGGAGAAGGAATAGGAGA+AGG + chr8_2:26096752-26096771 None:intergenic 50.0%
GAAGGAGGAGGAGAAGGAAT+AGG + chr8_2:26096758-26096777 None:intergenic 50.0%
GTAGAAGGAGAAGGAGAAGG+AGG + chr8_2:26096773-26096792 None:intergenic 50.0%
GGAGTAGAAGGAGAAGGAGA+AGG + chr8_2:26096776-26096795 None:intergenic 50.0%
!! GGAACGGATTGAGGAGAGAA+TGG + chr8_2:26096852-26096871 None:intergenic 50.0%
CTCAATCCGTTCCTCTCCTA+CGG - chr8_2:26096859-26096878 Msa1242060:CDS 50.0%
CTCGGCATGGTTAAGAGAAG+TGG + chr8_2:26096984-26097003 None:intergenic 50.0%
ATCGTCTAGTGCCGCAATCT+CGG + chr8_2:26097002-26097021 None:intergenic 50.0%
! CACCGATGTGTTGGTGGAAA+AGG - chr8_2:26097108-26097127 Msa1242060:intron 50.0%
TTGATATAACTGGGGTGGGG+TGG + chr8_2:26098311-26098330 None:intergenic 50.0%
TGAGGAAGAGGGAGAGAAGA+AGG + chr8_2:26096604-26096623 None:intergenic 50.0%
GGAGGAGAAAGGGTGAAATG+AGG + chr8_2:26096622-26096641 None:intergenic 50.0%
GGTTTGTGCTTGGAGGAGAA+AGG + chr8_2:26096633-26096652 None:intergenic 50.0%
GGAGGAGAAGGAATAGGAGA+AGG + chr8_2:26096752-26096771 None:intergenic 50.0%
GAAGGAGGAGGAGAAGGAAT+AGG + chr8_2:26096758-26096777 None:intergenic 50.0%
GTAGAAGGAGAAGGAGAAGG+AGG + chr8_2:26096773-26096792 None:intergenic 50.0%
GGAGTAGAAGGAGAAGGAGA+AGG + chr8_2:26096776-26096795 None:intergenic 50.0%
!! GGAACGGATTGAGGAGAGAA+TGG + chr8_2:26096852-26096871 None:intergenic 50.0%
CTCAATCCGTTCCTCTCCTA+CGG - chr8_2:26096859-26096878 Msa1242060:CDS 50.0%
CTCGGCATGGTTAAGAGAAG+TGG + chr8_2:26096984-26097003 None:intergenic 50.0%
ATCGTCTAGTGCCGCAATCT+CGG + chr8_2:26097002-26097021 None:intergenic 50.0%
! CACCGATGTGTTGGTGGAAA+AGG - chr8_2:26097108-26097127 Msa1242060:intron 50.0%
TTGATATAACTGGGGTGGGG+TGG + chr8_2:26098311-26098330 None:intergenic 50.0%
GAAGGAGAAGGAGGAGGAGA+AGG + chr8_2:26096764-26096783 None:intergenic 55.0%
GAAGGAGAAGGAGAAGGAGG+AGG + chr8_2:26096770-26096789 None:intergenic 55.0%
!! CGTAGGAGAGGAACGGATTG+AGG + chr8_2:26096861-26096880 None:intergenic 55.0%
GAAGGAGAAGGAGGAGGAGA+AGG + chr8_2:26096764-26096783 None:intergenic 55.0%
GAAGGAGAAGGAGAAGGAGG+AGG + chr8_2:26096770-26096789 None:intergenic 55.0%
!! CGTAGGAGAGGAACGGATTG+AGG + chr8_2:26096861-26096880 None:intergenic 55.0%
AGGGGTCCGTAGGAGAGGAA+CGG + chr8_2:26096868-26096887 None:intergenic 60.0%
CCTAAGTGGTAGGGGTCCGT+AGG + chr8_2:26096878-26096897 None:intergenic 60.0%
CCTACGGACCCCTACCACTT+AGG - chr8_2:26096875-26096894 Msa1242060:CDS 60.0%
CTAGTGCCGCAATCTCGGCA+TGG + chr8_2:26096997-26097016 None:intergenic 60.0%
AGGGGTCCGTAGGAGAGGAA+CGG + chr8_2:26096868-26096887 None:intergenic 60.0%
CCTAAGTGGTAGGGGTCCGT+AGG + chr8_2:26096878-26096897 None:intergenic 60.0%
CCTACGGACCCCTACCACTT+AGG - chr8_2:26096875-26096894 Msa1242060:CDS 60.0%
CTAGTGCCGCAATCTCGGCA+TGG + chr8_2:26096997-26097016 None:intergenic 60.0%
GTGGTAGGGGTCCGTAGGAG+AGG + chr8_2:26096873-26096892 None:intergenic 65.0%
GTGGTAGGGGTCCGTAGGAG+AGG + chr8_2:26096873-26096892 None:intergenic 65.0%
Chromosome Type Strat End Strand Name
chr8_2 gene 26096569 26098932 26096569 ID=Msa1242060;Name=Msa1242060
chr8_2 mRNA 26096569 26098932 26096569 ID=Msa1242060-mRNA-1;Parent=Msa1242060;Name=Msa1242060-mRNA-1;_AED=0.01;_eAED=0.01;_QI=0|0|0|1|1|1|2|0|396
chr8_2 exon 26098126 26098932 26098126 ID=Msa1242060-mRNA-1:exon:9226;Parent=Msa1242060-mRNA-1
chr8_2 exon 26096569 26096952 26096569 ID=Msa1242060-mRNA-1:exon:9225;Parent=Msa1242060-mRNA-1
chr8_2 CDS 26098126 26098932 26098126 ID=Msa1242060-mRNA-1:cds;Parent=Msa1242060-mRNA-1
chr8_2 CDS 26096569 26096952 26096569 ID=Msa1242060-mRNA-1:cds;Parent=Msa1242060-mRNA-1
Gene Sequence

>Msa1242060

ATGTCAAACTCATCAACTTCCTTCATTGTTCTCCTTCTTCTCTCCCTCTTCCTCATTTCACCCTTTCTCCTCCAAGCACAAACCTCTTCTTCTTCTCCTTCTCCTTCTCATTCTTCTTCTCCTTCTCCTTTTGATTCTCCTTCTCCTTCTCCTTCTCATTCTTCTTCTCCTTCTCCTTTTCCTTCTCCTATTCCTTCTCCTCCTCCTTCTCCTTCTCCTTCTACTCCTACTTCTTCTTCCAAAGCATGCAAATCAACATTATATCCAAAACTATGTCGTTCCATTCTCTCCTCAATCCGTTCCTCTCCTACGGACCCCTACCACTTAGGAAAATTCTCAATAAAACAAAGCCTCAAACAAGCCAAAAAACTATCCAAAGTATTCAAAGACTTTCTCAAAAAACATCACCACTCCACTTCTCTTAACCATGCCGAGATTGCGGCACTAGACGATTGTAGTGAACTAAACCAGCTCAATGTAGATTACTTAGAGTTAGTCCGAGATGAACTTAAATCAGCTGATTCTTCATCTTTTAACAACACCGATGTGTTGGTGGAAAAGGTTGAAACTTATCTTAGTGCTGTGGCTACTAATCATTATACTTGTTTTGATGGGTTGGTTGTGACTAAAAGTAACATTGCTAATGCGCTTGCTGTGCCATTGAGTAATGTTACACAATTATATAGTATTTCACTTGGGTTGGCCACTCAAGCTTTGAGTAAAAATATTAAGAAGCGTAAGACTCGCAAACAAGGTCTTCCTACTAAGGCTTACAAGGTCAGACAGCCACTTAAAAAGCTTATTAAGCTTCTTCACACAAAACACAGTTGCAATAACTCATCCAACTGTGTTAGACACGAAAGGATTCTTAAAGAAAGCGAAAATAGAGGAATTTTACTGAAAGAATATGTTATTGTGAGTCTTGATGGAACAGAAAACTTCACTTCTATTGGGGAAGCTATTGAAGCTGCACCTCATAATTTGAAGGCAGAAGATGGCTATTTTCTTATCTATGTCAAAGAAGGAGTATATGAAGAATATGTTACTATTACAAAACATAAGAAGAATATCTTGCTTATTGGTGATGGTATTAACAAGACTTGCATCACAGGAAATCATAGTGTGGTAGATGGTTGGACCACTTTTAATTCTTCAACCTTTGGTAAGTCAAATTTTTTCAACTATACTTGA
Protein sequence

>Msa1242060

MSNSSTSFIVLLLLSLFLISPFLLQAQTSSSSPSPSHSSSPSPFDSPSPSPSHSSSPSPFPSPIPSPPPSPSPSTPTSSSKACKSTLYPKLCRSILSSIRSSPTDPYHLGKFSIKQSLKQAKKLSKVFKDFLKKHHHSTSLNHAEIAALDDCSELNQLNVDYLELVRDELKSADSSSFNNTDVLVEKVETYLSAVATNHYTCFDGLVVTKSNIANALAVPLSNVTQLYSISLGLATQALSKNIKKRKTRKQGLPTKAYKVRQPLKKLIKLLHTKHSCNNSSNCVRHERILKESENRGILLKEYVIVSLDGTENFTSIGEAIEAAPHNLKAEDGYFLIYVKEGVYEEYVTITKHKKNILLIGDGINKTCITGNHSVVDGWTTFNSSTFGKSNFFNYT*