Alfalfa Gene Editing Database
Alfalfa Gene Editing Database
| Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa0216760 | KAG5546319.1 | 63.535 | 628 | 170 | 6 | 33 | 601 | 30 | 657 | 0.0 | 822 |
| Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|
| Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa0216760 | A0A5B6VEY8 | 58.234 | 668 | 200 | 6 | 12 | 601 | 8 | 674 | 0.0 | 806 |
| Gene ID | Type | Classification |
|---|
| Gene ID | Type | Classification |
|---|
Co-expression Network
| Gene1 | Gene2 | correlation coefficient | p_value | FDR |
|---|---|---|---|---|
| Msa0006050 | Msa0216760 | -0.800674 | 1.289912e-48 | -8.615850e-47 |
| Msa0012780 | Msa0216760 | 0.803079 | 4.137527e-49 | -8.615850e-47 |
| Msa0012790 | Msa0216760 | 0.802119 | 6.525570e-49 | -8.615850e-47 |
| Msa0012820 | Msa0216760 | 0.815453 | 9.175191e-52 | -8.615850e-47 |
| Msa0014590 | Msa0216760 | 0.811828 | 5.758737e-51 | -8.615850e-47 |
| Msa0025700 | Msa0216760 | 0.812262 | 4.630938e-51 | -8.615850e-47 |
| Msa0045850 | Msa0216760 | 0.810465 | 1.137517e-50 | -8.615850e-47 |
| Msa0048950 | Msa0216760 | 0.814185 | 1.752499e-51 | -8.615850e-47 |
| Msa0059880 | Msa0216760 | 0.848475 | 5.986379e-60 | -8.615850e-47 |
| Msa0061600 | Msa0216760 | 0.824958 | 6.085880e-54 | -8.615850e-47 |
| Msa0072030 | Msa0216760 | 0.809999 | 1.433004e-50 | -8.615850e-47 |
| Msa0073280 | Msa0216760 | 0.819736 | 9.930769e-53 | -8.615850e-47 |
| Msa0106110 | Msa0216760 | 0.807217 | 5.629545e-50 | -8.615850e-47 |
| Msa0106120 | Msa0216760 | 0.810825 | 9.505705e-51 | -8.615850e-47 |
| Msa0106130 | Msa0216760 | 0.817858 | 2.651625e-52 | -8.615850e-47 |
| Msa0108350 | Msa0216760 | 0.809339 | 1.987346e-50 | -8.615850e-47 |
| Msa0121910 | Msa0216760 | 0.818014 | 2.444890e-52 | -8.615850e-47 |
| Msa0135130 | Msa0216760 | 0.805917 | 1.058887e-49 | -8.615850e-47 |
| Msa0139460 | Msa0216760 | 0.813846 | 2.081263e-51 | -8.615850e-47 |
| Msa0140270 | Msa0216760 | 0.804110 | 2.527895e-49 | -8.615850e-47 |
| Msa0150910 | Msa0216760 | 0.834515 | 2.867214e-56 | -8.615850e-47 |
| Msa0152740 | Msa0216760 | 0.829017 | 6.512610e-55 | -8.615850e-47 |
| Msa0177550 | Msa0216760 | 0.813421 | 2.581485e-51 | -8.615850e-47 |
| Msa0190670 | Msa0216760 | 0.829402 | 5.253223e-55 | -8.615850e-47 |
| Msa0190890 | Msa0216760 | 0.803360 | 3.618743e-49 | -8.615850e-47 |
| Msa0194230 | Msa0216760 | 0.820645 | 6.148292e-53 | -8.615850e-47 |
| Msa0196260 | Msa0216760 | 0.815668 | 8.215037e-52 | -8.615850e-47 |
| Msa0212550 | Msa0216760 | 0.829115 | 6.164576e-55 | -8.615850e-47 |
| Msa0216760 | Msa0223880 | 0.826223 | 3.052525e-54 | -8.615850e-47 |
| Msa0216760 | Msa0251120 | 0.803946 | 2.734424e-49 | -8.615850e-47 |
| Msa0216760 | Msa0252930 | 0.830258 | 3.249959e-55 | -8.615850e-47 |
| Msa0216760 | Msa0261400 | 0.804567 | 2.030393e-49 | -8.615850e-47 |
| Msa0216760 | Msa0265060 | 0.822316 | 2.528969e-53 | -8.615850e-47 |
| Msa0216760 | Msa0274250 | 0.836770 | 7.703564e-57 | -8.615850e-47 |
| Msa0216760 | Msa0274260 | 0.812626 | 3.855820e-51 | -8.615850e-47 |
| Msa0216760 | Msa0278480 | 0.806163 | 9.402011e-50 | -8.615850e-47 |
| Msa0216760 | Msa0278950 | 0.832096 | 1.148798e-55 | -8.615850e-47 |
| Msa0216760 | Msa0295980 | 0.934369 | 4.491924e-96 | -8.615850e-47 |
| Msa0216760 | Msa0304550 | 0.803839 | 2.877924e-49 | -8.615850e-47 |
| Msa0216760 | Msa0314440 | 0.828611 | 8.167138e-55 | -8.615850e-47 |
| Msa0216760 | Msa0333940 | 0.864683 | 1.019517e-64 | -8.615850e-47 |
| Msa0216760 | Msa0334050 | 0.870932 | 1.003847e-66 | -8.615850e-47 |
| Msa0216760 | Msa0340650 | 0.825884 | 3.674649e-54 | -8.615850e-47 |
| Msa0216760 | Msa0343720 | 0.821308 | 4.326708e-53 | -8.615850e-47 |
| Msa0216760 | Msa0349910 | 0.813504 | 2.476028e-51 | -8.615850e-47 |
| Msa0216760 | Msa0374130 | 0.815517 | 8.877103e-52 | -8.615850e-47 |
| Msa0216760 | Msa0396860 | 0.808693 | 2.732527e-50 | -8.615850e-47 |
| Msa0216760 | Msa0469550 | 0.824957 | 6.090913e-54 | -8.615850e-47 |
| Msa0216760 | Msa0491770 | 0.819523 | 1.110559e-52 | -8.615850e-47 |
| Msa0216760 | Msa0515260 | 0.824819 | 6.563837e-54 | -8.615850e-47 |
| Msa0216760 | Msa0538450 | 0.808782 | 2.615605e-50 | -8.615850e-47 |
| Msa0216760 | Msa0538520 | 0.812185 | 4.814826e-51 | -8.615850e-47 |
| Msa0216760 | Msa0548760 | 0.817366 | 3.423604e-52 | -8.615850e-47 |
| Msa0216760 | Msa0549920 | 0.800916 | 1.151505e-48 | -8.615850e-47 |
| Msa0216760 | Msa0584970 | 0.837708 | 4.432805e-57 | -8.615850e-47 |
| Msa0216760 | Msa0594320 | 0.809806 | 1.577328e-50 | -8.615850e-47 |
| Msa0216760 | Msa0594330 | 0.809011 | 2.335727e-50 | -8.615850e-47 |
| Msa0216760 | Msa0599600 | 0.800139 | 1.658028e-48 | -8.615850e-47 |
| Msa0216760 | Msa0602050 | 0.815968 | 7.045028e-52 | -8.615850e-47 |
| Msa0216760 | Msa0605400 | 0.803963 | 2.712300e-49 | -8.615850e-47 |
| Msa0216760 | Msa0605410 | 0.848475 | 5.985150e-60 | -8.615850e-47 |
| Msa0216760 | Msa0605470 | 0.804043 | 2.610897e-49 | -8.615850e-47 |
| Msa0216760 | Msa0623980 | 0.812104 | 5.014658e-51 | -8.615850e-47 |
| Msa0216760 | Msa0627050 | -0.800183 | 1.623957e-48 | -8.615850e-47 |
| Msa0216760 | Msa0643190 | 0.817635 | 2.977483e-52 | -8.615850e-47 |
| Msa0216760 | Msa0645060 | 0.835037 | 2.118873e-56 | -8.615850e-47 |
| Msa0216760 | Msa0645120 | 0.805076 | 1.589547e-49 | -8.615850e-47 |
| Msa0216760 | Msa0646210 | 0.806452 | 8.169657e-50 | -8.615850e-47 |
| Msa0216760 | Msa0670360 | 0.825879 | 3.684423e-54 | -8.615850e-47 |
| Msa0216760 | Msa0671640 | 0.816320 | 5.877293e-52 | -8.615850e-47 |
| Msa0216760 | Msa0676200 | 0.822607 | 2.164089e-53 | -8.615850e-47 |
| Msa0216760 | Msa0684560 | 0.835615 | 1.513398e-56 | -8.615850e-47 |
| Msa0216760 | Msa0735140 | 0.818887 | 1.549901e-52 | -8.615850e-47 |
| Msa0216760 | Msa0751960 | 0.806425 | 8.276268e-50 | -8.615850e-47 |
| Msa0216760 | Msa0768670 | 0.806521 | 7.899441e-50 | -8.615850e-47 |
| Msa0216760 | Msa0768720 | 0.827764 | 1.306815e-54 | -8.615850e-47 |
| Msa0216760 | Msa0777060 | 0.806742 | 7.095869e-50 | -8.615850e-47 |
| Msa0216760 | Msa0777070 | 0.842937 | 1.906150e-58 | -8.615850e-47 |
| Msa0216760 | Msa0787860 | 0.809834 | 1.555396e-50 | -8.615850e-47 |
| Msa0216760 | Msa0814160 | 0.835362 | 1.754309e-56 | -8.615850e-47 |
| Msa0216760 | Msa0824860 | 0.819310 | 1.242128e-52 | -8.615850e-47 |
| Msa0216760 | Msa0854840 | 0.858688 | 6.938154e-63 | -8.615850e-47 |
| Msa0216760 | Msa0861730 | 0.809499 | 1.836308e-50 | -8.615850e-47 |
| Msa0216760 | Msa0863840 | 0.814085 | 1.843384e-51 | -8.615850e-47 |
| Msa0216760 | Msa0864160 | 0.811364 | 7.263408e-51 | -8.615850e-47 |
| Msa0216760 | Msa0883640 | 0.841391 | 4.888622e-58 | -8.615850e-47 |
| Msa0216760 | Msa0902340 | 0.823072 | 1.686769e-53 | -8.615850e-47 |
| Msa0216760 | Msa0910830 | 0.858462 | 8.101202e-63 | -8.615850e-47 |
| Msa0216760 | Msa0933590 | 0.816076 | 6.663322e-52 | -8.615850e-47 |
| Msa0216760 | Msa0960090 | 0.843112 | 1.711478e-58 | -8.615850e-47 |
| Msa0216760 | Msa0967820 | 0.812575 | 3.956079e-51 | -8.615850e-47 |
| Msa0216760 | Msa0972370 | 0.800003 | 1.766976e-48 | -8.615850e-47 |
| Msa0216760 | Msa0985700 | 0.840910 | 6.541504e-58 | -8.615850e-47 |
| Msa0216760 | Msa0987640 | 0.801657 | 8.118745e-49 | -8.615850e-47 |
| Msa0216760 | Msa0993450 | 0.808233 | 3.424865e-50 | -8.615850e-47 |
| Msa0216760 | Msa1006170 | 0.813255 | 2.807200e-51 | -8.615850e-47 |
| Msa0216760 | Msa1007940 | 0.815502 | 8.946767e-52 | -8.615850e-47 |
| Msa0216760 | Msa1007950 | 0.813225 | 2.850428e-51 | -8.615850e-47 |
| Msa0216760 | Msa1021620 | 0.811010 | 8.671545e-51 | -8.615850e-47 |
| Msa0216760 | Msa1024350 | 0.847908 | 8.583324e-60 | -8.615850e-47 |
| Msa0216760 | Msa1026050 | 0.806405 | 8.360695e-50 | -8.615850e-47 |
| Msa0216760 | Msa1041630 | 0.829776 | 4.259800e-55 | -8.615850e-47 |
| Msa0216760 | Msa1042340 | 0.800426 | 1.449439e-48 | -8.615850e-47 |
| Msa0216760 | Msa1061670 | 0.824769 | 6.744595e-54 | -8.615850e-47 |
| Msa0216760 | Msa1076830 | 0.824643 | 7.224499e-54 | -8.615850e-47 |
| Msa0216760 | Msa1081610 | 0.822350 | 2.483122e-53 | -8.615850e-47 |
| Msa0216760 | Msa1087370 | 0.833611 | 4.827223e-56 | -8.615850e-47 |
| Msa0216760 | Msa1087380 | 0.822291 | 2.562911e-53 | -8.615850e-47 |
| Msa0216760 | Msa1106680 | 0.804030 | 2.626931e-49 | -8.615850e-47 |
| Msa0216760 | Msa1106960 | 0.812507 | 4.094717e-51 | -8.615850e-47 |
| Msa0216760 | Msa1109880 | 0.821726 | 3.463643e-53 | -8.615850e-47 |
| Msa0216760 | Msa1109890 | 0.850346 | 1.802555e-60 | -8.615850e-47 |
| Msa0216760 | Msa1166530 | 0.826623 | 2.450165e-54 | -8.615850e-47 |
| Msa0216760 | Msa1170320 | 0.811497 | 6.796016e-51 | -8.615850e-47 |
| Msa0216760 | Msa1187900 | 0.808965 | 2.389161e-50 | -8.615850e-47 |
| Msa0216760 | Msa1214960 | 0.813576 | 2.386857e-51 | -8.615850e-47 |
| Msa0216760 | Msa1216600 | 0.838973 | 2.091903e-57 | -8.615850e-47 |
| Msa0216760 | Msa1242060 | 0.826871 | 2.138439e-54 | -8.615850e-47 |
| Msa0216760 | Msa1286420 | 0.831467 | 1.642235e-55 | -8.615850e-47 |
| Msa0216760 | Msa1296870 | 0.828704 | 7.753109e-55 | -8.615850e-47 |
| Msa0216760 | Msa1300610 | 0.820033 | 8.491416e-53 | -8.615850e-47 |
| Msa0216760 | Msa1316870 | 0.810717 | 1.003427e-50 | -8.615850e-47 |
| Msa0216760 | Msa1323030 | 0.840566 | 8.049537e-58 | -8.615850e-47 |
| Msa0216760 | Msa1323120 | 0.803027 | 4.240491e-49 | -8.615850e-47 |
| Msa0216760 | Msa1323160 | 0.821222 | 4.529219e-53 | -8.615850e-47 |
| Msa0216760 | Msa1329740 | 0.822537 | 2.246377e-53 | -8.615850e-47 |
| Msa0216760 | Msa1357490 | 0.840345 | 9.195197e-58 | -8.615850e-47 |
| Msa0216760 | Msa1357750 | 0.817589 | 3.049023e-52 | -8.615850e-47 |
| Msa0216760 | Msa1357860 | 0.841674 | 4.117354e-58 | -8.615850e-47 |
| Msa0216760 | Msa1371870 | 0.829737 | 4.353362e-55 | -8.615850e-47 |
| Msa0216760 | Msa1373560 | 0.815634 | 8.360618e-52 | -8.615850e-47 |
| Msa0216760 | Msa1376070 | 0.825829 | 3.787276e-54 | -8.615850e-47 |
| Msa0216760 | Msa1377520 | 0.818982 | 1.475291e-52 | -8.615850e-47 |
| Msa0216760 | Msa1407670 | 0.828873 | 7.056895e-55 | -8.615850e-47 |
| Msa0216760 | Msa1411550 | 0.813056 | 3.105600e-51 | -8.615850e-47 |
| Msa0216760 | Msa1426420 | 0.833545 | 5.014678e-56 | -8.615850e-47 |
| Msa0216760 | Msa1445900 | 0.815303 | 9.906535e-52 | -8.615850e-47 |
| Msa0216760 | Msa1449770 | 0.826949 | 2.048395e-54 | -8.615850e-47 |
| Msa0216760 | Msa1451660 | 0.801361 | 9.335138e-49 | -8.615850e-47 |
| Msa0216760 | Msa1459610 | 0.836987 | 6.781252e-57 | -8.615850e-47 |
PPI
| Gene1 | Gene2 | Type |
|---|
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa0216760 | MtrunA17_Chr2g0318341 | 91.798 | 317 | 26 | 0 | 285 | 601 | 25 | 341 | 0.0 | 604 |
| Msa0216760 | MtrunA17_Chr2g0318341 | 88.131 | 337 | 7 | 2 | 1 | 304 | 1 | 337 | 0.0 | 583 |
| Msa0216760 | MtrunA17_Chr2g0318311 | 90.536 | 317 | 30 | 0 | 285 | 601 | 25 | 341 | 0.0 | 593 |
| Msa0216760 | MtrunA17_Chr2g0318311 | 84.866 | 337 | 18 | 2 | 1 | 304 | 1 | 337 | 0.0 | 582 |
| Msa0216760 | MtrunA17_Chr8g0360691 | 72.727 | 297 | 81 | 0 | 305 | 601 | 45 | 341 | 8.98e-162 | 466 |
| Msa0216760 | MtrunA17_Chr8g0360691 | 62.310 | 329 | 90 | 3 | 10 | 304 | 9 | 337 | 1.14e-138 | 407 |
| Msa0216760 | MtrunA17_Chr4g0029291 | 48.571 | 280 | 137 | 4 | 306 | 582 | 120 | 395 | 1.96e-88 | 280 |
| Msa0216760 | MtrunA17_Chr4g0029291 | 43.750 | 288 | 122 | 7 | 38 | 289 | 112 | 395 | 1.27e-71 | 235 |
| Msa0216760 | MtrunA17_Chr4g0029271 | 47.143 | 280 | 142 | 4 | 306 | 582 | 110 | 386 | 2.15e-87 | 276 |
| Msa0216760 | MtrunA17_Chr4g0029271 | 43.158 | 285 | 123 | 5 | 41 | 289 | 105 | 386 | 3.49e-73 | 239 |
| Msa0216760 | MtrunA17_Chr2g0287361 | 42.574 | 303 | 142 | 7 | 307 | 601 | 53 | 331 | 1.38e-76 | 246 |
| Msa0216760 | MtrunA17_Chr2g0287361 | 36.610 | 295 | 130 | 8 | 33 | 293 | 38 | 309 | 2.17e-54 | 188 |
| Msa0216760 | MtrunA17_Chr2g0292811 | 42.384 | 302 | 142 | 7 | 308 | 601 | 53 | 330 | 5.66e-75 | 242 |
| Msa0216760 | MtrunA17_Chr2g0292811 | 37.591 | 274 | 123 | 6 | 33 | 274 | 37 | 294 | 7.07e-54 | 186 |
| Msa0216760 | MtrunA17_Chr2g0292801 | 43.509 | 285 | 138 | 6 | 325 | 601 | 324 | 593 | 3.04e-72 | 243 |
| Msa0216760 | MtrunA17_Chr2g0292801 | 36.957 | 276 | 126 | 6 | 31 | 274 | 298 | 557 | 2.72e-51 | 186 |
| Msa0216760 | MtrunA17_Chr2g0292821 | 43.571 | 280 | 145 | 5 | 325 | 601 | 324 | 593 | 1.91e-71 | 241 |
| Msa0216760 | MtrunA17_Chr2g0292821 | 35.275 | 309 | 148 | 8 | 31 | 304 | 298 | 589 | 1.45e-50 | 184 |
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa0216760 | AT5G54370.1 | 64.883 | 299 | 100 | 2 | 306 | 601 | 41 | 337 | 3.60e-146 | 426 |
| Msa0216760 | AT5G54370.1 | 54.491 | 334 | 112 | 5 | 7 | 304 | 4 | 333 | 4.58e-124 | 369 |
| Msa0216760 | AT1G54890.1 | 60.927 | 302 | 113 | 3 | 305 | 601 | 46 | 347 | 1.20e-135 | 399 |
| Msa0216760 | AT1G54890.1 | 53.172 | 331 | 113 | 5 | 16 | 304 | 13 | 343 | 1.71e-119 | 358 |
| Msa0216760 | AT4G27400.1 | 56.289 | 318 | 132 | 3 | 289 | 601 | 26 | 341 | 3.45e-131 | 388 |
| Msa0216760 | AT4G27400.1 | 49.398 | 332 | 126 | 5 | 13 | 304 | 8 | 337 | 2.58e-107 | 327 |
| Msa0216760 | AT5G60520.1 | 51.698 | 265 | 124 | 3 | 306 | 567 | 64 | 327 | 1.63e-92 | 288 |
| Msa0216760 | AT5G60520.1 | 45.487 | 277 | 113 | 5 | 34 | 274 | 53 | 327 | 3.01e-76 | 246 |
| Msa0216760 | AT5G60530.1 | 49.817 | 273 | 132 | 3 | 306 | 574 | 164 | 435 | 3.12e-92 | 291 |
| Msa0216760 | AT5G60530.1 | 45.263 | 285 | 117 | 6 | 34 | 281 | 153 | 435 | 9.53e-79 | 256 |
| Msa0216760 | AT3G19430.1 | 40.594 | 303 | 159 | 6 | 303 | 601 | 274 | 559 | 4.45e-73 | 244 |
| Msa0216760 | AT3G19430.1 | 36.039 | 308 | 143 | 8 | 34 | 304 | 265 | 555 | 5.67e-54 | 193 |
| Msa0216760 | AT3G19430.2 | 40.594 | 303 | 159 | 6 | 303 | 601 | 297 | 582 | 5.27e-73 | 245 |
| Msa0216760 | AT3G19430.2 | 36.039 | 308 | 143 | 8 | 34 | 304 | 288 | 578 | 5.46e-54 | 194 |
Find 161 sgRNAs with CRISPR-Local
Find 356 sgRNAs with CRISPR-GE
CRISPR-Local
| sgRNA_sequence | on_target_score | Position | Region |
|---|---|---|---|
| AAGCCACACCATCATCAATT+TGG | 0.212135 | 2_1:-62968036 | Msa0216760:CDS |
| AGATAGCAAACTTTGTCTTT+TGG | 0.252280 | 2_1:+62968582 | None:intergenic |
| ACAGATATTTCAGCAACTTC+TGG | 0.256973 | 2_1:+62967869 | None:intergenic |
| ACAGATATTTCAGCAACTTC+TGG | 0.256973 | 2_1:+62971434 | None:intergenic |
| CATCAGGAATCTGATAATTA+TGG | 0.264771 | 2_1:+62967810 | None:intergenic |
| CATCAGGAATCTGATAATTA+TGG | 0.264771 | 2_1:+62971375 | None:intergenic |
| ATTGCCACGCCTGGCTTTGC+CGG | 0.284921 | 2_1:+62967686 | Msa0216750:CDS |
| GATCCGCGACCATTACAATT+TGG | 0.285841 | 2_1:+62968265 | None:intergenic |
| TCCAAGAACTCCTTCAACTT+TGG | 0.319801 | 2_1:+62967736 | None:intergenic |
| GATGTGCAGTTCAAATTCTA+TGG | 0.321248 | 2_1:-62967767 | Msa0216760:CDS |
| GATGTGCAGTTCAAATTCTA+TGG | 0.321248 | 2_1:-62971332 | Msa0216760:intron |
| CACGTAGAGAGGTGACCTTC+AGG | 0.324319 | 2_1:+62967959 | None:intergenic |
| CACGTAGAGAGGTGACCTTC+AGG | 0.324319 | 2_1:+62971524 | None:intergenic |
| ATAGCCACACCTGGCTTTGC+CGG | 0.333888 | 2_1:+62971251 | None:intergenic |
| TCCAAAGTTGAAGGAGTTCT+TGG | 0.337116 | 2_1:-62967737 | Msa0216760:CDS |
| TCCAAAGTTGAAGGAGTTCT+TGG | 0.358070 | 2_1:-62971302 | Msa0216760:intron |
| TAAAACGAGCATTGATTTGA+AGG | 0.368629 | 2_1:+62968146 | None:intergenic |
| TAAAACGAGCATTGATTTGA+AGG | 0.375773 | 2_1:+62971711 | None:intergenic |
| GGGTTAGCTGGTGATCTTGA+AGG | 0.383234 | 2_1:+62968603 | None:intergenic |
| CAGATATTTCAGCAACTTCT+GGG | 0.400574 | 2_1:+62967870 | None:intergenic |
| CAGATATTTCAGCAACTTCT+GGG | 0.400574 | 2_1:+62971435 | None:intergenic |
| AGCCACACCATCATCAATTT+GGG | 0.401698 | 2_1:-62968035 | Msa0216760:CDS |
| GAAGGCTTGGAGATTGAATA+TGG | 0.405534 | 2_1:-62967566 | Msa0216760:CDS |
| GAAGGCATGGAGATTGAATA+TGG | 0.412507 | 2_1:-62971131 | Msa0216760:CDS |
| GATCTGCATGCTTGGACCCT+CGG | 0.418311 | 2_1:-62968246 | Msa0216760:CDS |
| GGCGTGGCAATGCCGGTCAT+TGG | 0.420807 | 2_1:-62967674 | Msa0216760:CDS |
| TATACTTGGATTCAAGCATT+GGG | 0.425530 | 2_1:-62968091 | Msa0216760:CDS |
| TATACTTGGATTCAAGCATT+GGG | 0.425530 | 2_1:-62971656 | Msa0216760:CDS |
| TGGCCGCGGATCTGCGTGCT+TGG | 0.430493 | 2_1:-62971819 | Msa0216760:CDS |
| CCTCGTTTCGTTGGTGCGGA+TGG | 0.440785 | 2_1:-62971794 | Msa0216760:CDS |
| TGAGAAAACAACGGCTCTTA+CGG | 0.441610 | 2_1:+62972366 | None:intergenic |
| GGGTTAGCTGGTGATCTTGA+AGG | 0.441826 | 2_1:+62972317 | None:intergenic |
| AACTATACCATTACCACTGC+TGG | 0.442336 | 2_1:+62967520 | Msa0216750:CDS |
| AACTATACCATTACCACTGC+TGG | 0.442336 | 2_1:+62971085 | None:intergenic |
| ACGAGCATTGATTTGAAGGT+TGG | 0.446132 | 2_1:+62971715 | None:intergenic |
| CCTCGGTTCGTTGGTGCGGA+TGG | 0.452228 | 2_1:-62968229 | Msa0216760:CDS |
| AGATTCAGTGCAGGAAGGCT+TGG | 0.454274 | 2_1:-62967579 | Msa0216760:CDS |
| AAAGCCAGGCGTGGCAATGC+CGG | 0.457703 | 2_1:-62967681 | Msa0216760:CDS |
| TTGGTCTCCCTTGCGGCCTA+AGG | 0.460474 | 2_1:+62968119 | None:intergenic |
| TTGGTCTCCCTTGCGGCCTA+AGG | 0.460474 | 2_1:+62971684 | None:intergenic |
| GGAGACCAAGGGATTATACT+TGG | 0.461637 | 2_1:-62968105 | Msa0216760:CDS |
| GGAGACCAAGGGATTATACT+TGG | 0.461637 | 2_1:-62971670 | Msa0216760:CDS |
| ATGACCGGCATTGCCACGCC+TGG | 0.467891 | 2_1:+62967677 | Msa0216750:CDS |
| ATGGATTCTACTGTCCTCCT+TGG | 0.475359 | 2_1:+62967829 | None:intergenic |
| ATGGATTCTACTGTCCTCCT+TGG | 0.475359 | 2_1:+62971394 | None:intergenic |
| ATCTTGAAGGGCACTGAGTA+GGG | 0.476219 | 2_1:+62968616 | None:intergenic |
| GTGGCAATGCCGGTCATTGG+AGG | 0.478744 | 2_1:-62967671 | Msa0216760:CDS |
| TTATACTTGGATTCAAGCAT+TGG | 0.481860 | 2_1:-62968092 | Msa0216760:CDS |
| TTATACTTGGATTCAAGCAT+TGG | 0.481860 | 2_1:-62971657 | Msa0216760:CDS |
| TTGTCTTCCCCTCCAACTAC+TGG | 0.482550 | 2_1:+62971227 | None:intergenic |
| TGAGCAAAACAATCATCATC+AGG | 0.483129 | 2_1:+62967794 | None:intergenic |
| TGAGCAAAACAATCATCATC+AGG | 0.483129 | 2_1:+62971359 | None:intergenic |
| GGTGGCGCCAGCAGTGGTAA+TGG | 0.488482 | 2_1:-62967527 | Msa0216760:CDS |
| TTTCAAAATCCGGCAAAGCC+AGG | 0.488564 | 2_1:-62967695 | Msa0216760:CDS |
| GGTTAGCTGGTGATCTTGAA+GGG | 0.489453 | 2_1:+62968604 | None:intergenic |
| TGGTCGCGGATCTGCATGCT+TGG | 0.491252 | 2_1:-62968254 | Msa0216760:CDS |
| GGTCGTAAAGCAAATTGTAA+TGG | 0.494042 | 2_1:-62971839 | Msa0216760:CDS |
| CTACTGTCCTCCTTGGTGAC+AGG | 0.494181 | 2_1:+62967836 | None:intergenic |
| CTACTGTCCTCCTTGGTGAC+AGG | 0.494181 | 2_1:+62971401 | None:intergenic |
| TTTCAAAATCCGGCAAAGCC+AGG | 0.497033 | 2_1:-62971260 | Msa0216760:CDS |
| GGTGGTGCCAGCAGTGGTAA+TGG | 0.497160 | 2_1:-62971092 | Msa0216760:CDS |
| GGAGATTGAATATGGTATGA+TGG | 0.508182 | 2_1:-62967558 | Msa0216760:CDS |
| TGCTTGGACCCTCGGTTCGT+TGG | 0.509275 | 2_1:-62968238 | Msa0216760:CDS |
| GATCTTGAAGGACATTGAGC+AGG | 0.512583 | 2_1:+62972329 | None:intergenic |
| AATGCTCATTCCTCCTTCCA+TGG | 0.514259 | 2_1:+62971756 | None:intergenic |
| GGTGTGGCTATGCCAGTAGT+TGG | 0.516923 | 2_1:-62971239 | Msa0216760:CDS |
| TGGCAATGCCGGTCATTGGA+GGG | 0.520893 | 2_1:-62967670 | Msa0216760:CDS |
| AGATTCAGTGCAGGAAGGCA+TGG | 0.525207 | 2_1:-62971144 | Msa0216760:CDS |
| TGCTTGGACCCTCGTTTCGT+TGG | 0.528337 | 2_1:-62971803 | Msa0216760:CDS |
| GATCTTGAAGGGCACTGAGT+AGG | 0.531784 | 2_1:+62968615 | None:intergenic |
| GGACCCTCGGTTCGTTGGTG+CGG | 0.532291 | 2_1:-62968233 | Msa0216760:CDS |
| TTGTCTTCCCCTCCAATGAC+CGG | 0.533192 | 2_1:+62967662 | Msa0216750:CDS |
| CCTCGGATTGCCACGTAGAG+AGG | 0.534905 | 2_1:+62967948 | None:intergenic |
| CCTCGGATTGCCACGTAGAG+AGG | 0.534905 | 2_1:+62971513 | None:intergenic |
| TGCACGGGTGGCGCCAGCAG+TGG | 0.535388 | 2_1:-62967533 | Msa0216760:CDS |
| CAAGACAATCTGAAGAAACA+AGG | 0.537212 | 2_1:+62967624 | Msa0216750:CDS |
| ACGTAGAGAGGTGACCTTCA+GGG | 0.537243 | 2_1:+62967960 | None:intergenic |
| ACGTAGAGAGGTGACCTTCA+GGG | 0.537243 | 2_1:+62971525 | None:intergenic |
| TTTATCGGCCTTAGGCCGCA+AGG | 0.538998 | 2_1:-62968127 | Msa0216760:CDS |
| TTTATCGGCCTTAGGCCGCA+AGG | 0.538998 | 2_1:-62971692 | Msa0216760:CDS |
| GGTTTATCGTCCAAAGTTGA+AGG | 0.540641 | 2_1:-62967746 | Msa0216760:CDS |
| CATGACAATCTGAAGAAACA+AGG | 0.541262 | 2_1:+62971189 | None:intergenic |
| TGAATCCAAGTATAATCCCT+TGG | 0.542313 | 2_1:+62968100 | None:intergenic |
| TGAATCCAAGTATAATCCCT+TGG | 0.542313 | 2_1:+62971665 | None:intergenic |
| CGTCATAAGAGAGCTTCAAA+TGG | 0.545184 | 2_1:+62967999 | None:intergenic |
| AGTGCTCATTCCTCCTTCCA+TGG | 0.545876 | 2_1:+62968191 | None:intergenic |
| ATCTGAAGAAACAAGGGATG+TGG | 0.547311 | 2_1:+62967631 | Msa0216750:CDS |
| ATCTGAAGAAACAAGGGATG+TGG | 0.547311 | 2_1:+62971196 | None:intergenic |
| TTCTGCTAAAGATTCAGTGC+AGG | 0.549391 | 2_1:-62967588 | Msa0216760:CDS |
| TTCTGCTAAAGATTCAGTGC+AGG | 0.549391 | 2_1:-62971153 | Msa0216760:CDS |
| GGCAATGCCGGTCATTGGAG+GGG | 0.549475 | 2_1:-62967669 | Msa0216760:CDS |
| GGTCGTAAACCAAATTGTAA+TGG | 0.554034 | 2_1:-62968274 | Msa0216760:CDS |
| TCGTCATCCCAAATTGATGA+TGG | 0.560527 | 2_1:+62968028 | None:intergenic |
| GTGGCTATGCCAGTAGTTGG+AGG | 0.563541 | 2_1:-62971236 | Msa0216760:CDS |
| AAAAGTTGTGTGAATCAAAG+AGG | 0.574407 | 2_1:+62968065 | None:intergenic |
| CATTTGAAGCTCTCTTATGA+CGG | 0.574479 | 2_1:-62967998 | Msa0216760:CDS |
| CATTTGAAGCTCTCTTATGA+CGG | 0.574479 | 2_1:-62971563 | Msa0216760:intron |
| TTAGGCCGCAAGGGAGACCA+AGG | 0.575605 | 2_1:-62968117 | Msa0216760:CDS |
| TTAGGCCGCAAGGGAGACCA+AGG | 0.575605 | 2_1:-62971682 | Msa0216760:CDS |
| GAAGCTCTCTTATGACGGAA+AGG | 0.577165 | 2_1:-62967993 | Msa0216760:CDS |
| GAAGCTCTCTTATGACGGAA+AGG | 0.577165 | 2_1:-62971558 | Msa0216760:intron |
| GGCTATGCCAGTAGTTGGAG+GGG | 0.579023 | 2_1:-62971234 | Msa0216760:CDS |
| TGCACAGGTGGTGCCAGCAG+TGG | 0.580053 | 2_1:-62971098 | Msa0216760:CDS |
| AAGTTGAAGGAGTTCTTGGT+AGG | 0.583008 | 2_1:-62971298 | Msa0216760:intron |
| TGGCTATGCCAGTAGTTGGA+GGG | 0.587831 | 2_1:-62971235 | Msa0216760:CDS |
| GAGGAATGAGCATTTCAGCT+TGG | 0.589342 | 2_1:-62971747 | Msa0216760:CDS |
| ATCGAATGAGAACGGTGTCA+TGG | 0.591031 | 2_1:-62967900 | Msa0216760:CDS |
| ATCGAATGAGAACGGTGTCA+TGG | 0.591031 | 2_1:-62971465 | Msa0216760:CDS |
| AAACCAAATTGTAATGGTCG+CGG | 0.592477 | 2_1:-62968268 | Msa0216760:CDS |
| CAAGATCACCAGCTAACCCA+AGG | 0.593988 | 2_1:-62972313 | Msa0216760:CDS |
| GAGGAATGAGCACTTCAGCT+TGG | 0.594491 | 2_1:-62968182 | Msa0216760:CDS |
| TAATCCCTTGGTCTCCCTTG+CGG | 0.596610 | 2_1:+62968112 | None:intergenic |
| TAATCCCTTGGTCTCCCTTG+CGG | 0.596610 | 2_1:+62971677 | None:intergenic |
| AAAACAACGGCTCTTACGGT+TGG | 0.597533 | 2_1:+62972370 | None:intergenic |
| ACTACTGGCATAGCCACACC+TGG | 0.600637 | 2_1:+62971242 | None:intergenic |
| GAAGGACATTGAGCAGGGCA+AGG | 0.603155 | 2_1:+62972335 | None:intergenic |
| AAAGCAAATTGTAATGGCCG+CGG | 0.604200 | 2_1:-62971833 | Msa0216760:CDS |
| GGAGATTGAATATGGCATGA+TGG | 0.604264 | 2_1:-62971123 | Msa0216760:CDS |
| TTATCGGCCTTAGGCCGCAA+GGG | 0.605783 | 2_1:-62968126 | Msa0216760:CDS |
| TTATCGGCCTTAGGCCGCAA+GGG | 0.605783 | 2_1:-62971691 | Msa0216760:CDS |
| GGTCCAAGCACGCAGATCCG+CGG | 0.606584 | 2_1:+62971816 | None:intergenic |
| GCTAAAGATTCAGTGCAGGA+AGG | 0.607245 | 2_1:-62967584 | Msa0216760:CDS |
| CCTCTCTACGTGGCAATCCG+AGG | 0.608838 | 2_1:-62967948 | Msa0216760:CDS |
| CCTCTCTACGTGGCAATCCG+AGG | 0.608838 | 2_1:-62971513 | Msa0216760:CDS |
| GGACCCTCGTTTCGTTGGTG+CGG | 0.615729 | 2_1:-62971798 | Msa0216760:CDS |
| GGCATGATGGATTGCACAGG+TGG | 0.618394 | 2_1:-62971110 | Msa0216760:CDS |
| GGTATGATGGATTGCACGGG+TGG | 0.618602 | 2_1:-62967545 | Msa0216760:CDS |
| CCATCCGCACCAACGAAACG+AGG | 0.619171 | 2_1:+62971794 | None:intergenic |
| ATCTTGAAGGACATTGAGCA+GGG | 0.621400 | 2_1:+62972330 | None:intergenic |
| CAATGTGGTGCCTGTCACCA+AGG | 0.622527 | 2_1:-62967846 | Msa0216760:CDS |
| CAATGTGGTGCCTGTCACCA+AGG | 0.622527 | 2_1:-62971411 | Msa0216760:CDS |
| ATACTTGGATTCAAGCATTG+GGG | 0.623520 | 2_1:-62968090 | Msa0216760:CDS |
| ATACTTGGATTCAAGCATTG+GGG | 0.623520 | 2_1:-62971655 | Msa0216760:CDS |
| CATCCGCACCAACGAACCGA+GGG | 0.629982 | 2_1:+62968230 | None:intergenic |
| AAGGATCTCGTAATCCCTGA+AGG | 0.634498 | 2_1:-62967974 | Msa0216760:CDS |
| AAGGATCTCGTAATCCCTGA+AGG | 0.634498 | 2_1:-62971539 | Msa0216760:CDS |
| CCATCCGCACCAACGAACCG+AGG | 0.635702 | 2_1:+62968229 | None:intergenic |
| ATGACAATCTGAAGAAACAA+GGG | 0.637710 | 2_1:+62971190 | None:intergenic |
| ATCCCAAATTGATGATGGTG+TGG | 0.638854 | 2_1:+62968033 | None:intergenic |
| AAGACAATCTGAAGAAACAA+GGG | 0.640149 | 2_1:+62967625 | Msa0216750:CDS |
| GCTAAAGATTCAGTGCAGGA+AGG | 0.646657 | 2_1:-62971149 | Msa0216760:CDS |
| AAATCCGGCAAAGCCAGGCG+TGG | 0.649193 | 2_1:-62967690 | Msa0216760:CDS |
| GAGAGAACATCGAATGAGAA+CGG | 0.650582 | 2_1:-62967908 | Msa0216760:CDS |
| GAGAGAACATCGAATGAGAA+CGG | 0.650582 | 2_1:-62971473 | Msa0216760:CDS |
| AAATCCGGCAAAGCCAGGTG+TGG | 0.653931 | 2_1:-62971255 | Msa0216760:CDS |
| TACTTGGATTCAAGCATTGG+GGG | 0.654990 | 2_1:-62968089 | Msa0216760:CDS |
| TACTTGGATTCAAGCATTGG+GGG | 0.654990 | 2_1:-62971654 | Msa0216760:intron |
| ATATGGTATGATGGATTGCA+CGG | 0.657387 | 2_1:-62967549 | Msa0216760:CDS |
| TATGGCATGATGGATTGCAC+AGG | 0.667869 | 2_1:-62971113 | Msa0216760:CDS |
| CTGAAGGTCACCTCTCTACG+TGG | 0.671125 | 2_1:-62967958 | Msa0216760:CDS |
| CTGAAGGTCACCTCTCTACG+TGG | 0.671125 | 2_1:-62971523 | Msa0216760:CDS |
| GTAGTTTCTTGAGAAAACAA+CGG | 0.671848 | 2_1:+62972357 | None:intergenic |
| AAGATCACCAGCTAACCCAA+GGG | 0.673008 | 2_1:-62972312 | Msa0216760:CDS |
| CATCCGCACCAACGAAACGA+GGG | 0.683977 | 2_1:+62971795 | None:intergenic |
| TATGGTATGATGGATTGCAC+GGG | 0.687913 | 2_1:-62967548 | Msa0216760:CDS |
| TAGGCCGCAAGGGAGACCAA+GGG | 0.706685 | 2_1:-62968116 | Msa0216760:CDS |
| TAGGCCGCAAGGGAGACCAA+GGG | 0.706685 | 2_1:-62971681 | Msa0216760:CDS |
| TGCTGAAATATCTGTCAATG+TGG | 0.712131 | 2_1:-62967861 | Msa0216760:CDS |
| TGCTGAAATATCTGTCAATG+TGG | 0.712131 | 2_1:-62971426 | Msa0216760:CDS |
| TGTGGTGCCTGTCACCAAGG+AGG | 0.732407 | 2_1:-62967843 | Msa0216760:CDS |
| TGTGGTGCCTGTCACCAAGG+AGG | 0.732407 | 2_1:-62971408 | Msa0216760:CDS |
CRISPR-GE
| badsite warning | sgRNA_sequence | Strand | Position | Region | GC_content |
|---|---|---|---|---|---|
| !! | TAATCTATTTAATGAAAAAT+TGG | - | chr2_1:62970142-62970161 | Msa0216760:intron | 10.0% |
| !! | AAAATTACTTAAAATTAGAA+GGG | - | chr2_1:62970610-62970629 | Msa0216760:intron | 10.0% |
| !! | TTCTTGTGATAAATTTAATA+AGG | - | chr2_1:62967806-62967825 | Msa0216760:CDS | 15.0% |
| !! | TCATAATAATAAGAAAACAA+TGG | + | chr2_1:62968946-62968965 | None:intergenic | 15.0% |
| !! | CAAAATTACTTAAAATTAGA+AGG | - | chr2_1:62970609-62970628 | Msa0216760:intron | 15.0% |
| !!! | TTTTTCGTATTTTATGATAA+TGG | - | chr2_1:62971514-62971533 | Msa0216760:CDS | 15.0% |
| !! | GTGATAAATTTAATAAGGTT+TGG | - | chr2_1:62967811-62967830 | Msa0216760:CDS | 20.0% |
| !! | AACAAGTGATCATTATATAT+TGG | - | chr2_1:62968065-62968084 | Msa0216760:CDS | 20.0% |
| !! | AACAAGTGTTCATTATATAT+TGG | - | chr2_1:62968110-62968129 | Msa0216760:CDS | 20.0% |
| !! | ATTATATATTGGATGTGAAT+AGG | - | chr2_1:62968076-62968095 | Msa0216760:CDS | 20.0% |
| !! | TAATACAATTCTTACTCAAA+AGG | + | chr2_1:62969048-62969067 | None:intergenic | 20.0% |
| !! | TTTGTACAAGTGTATTAATT+TGG | - | chr2_1:62969086-62969105 | Msa0216760:intron | 20.0% |
| !! | TAACTCAGAAAAAAATGTTA+TGG | - | chr2_1:62969145-62969164 | Msa0216760:intron | 20.0% |
| !! | AACTCAGAAAAAAATGTTAT+GGG | - | chr2_1:62969146-62969165 | Msa0216760:intron | 20.0% |
| !! | CATATTTCTTAGTGATTATA+CGG | - | chr2_1:62969205-62969224 | Msa0216760:intron | 20.0% |
| !!! | TTCATTTGGAGTAATTTTAA+TGG | + | chr2_1:62969496-62969515 | None:intergenic | 20.0% |
| !! | AAATCAGATGTTTATTCATT+TGG | + | chr2_1:62969510-62969529 | None:intergenic | 20.0% |
| !!! | TTAATCTAGAATACTTTAGA+AGG | + | chr2_1:62969548-62969567 | None:intergenic | 20.0% |
| !!! | AGATAAAAGCATAATGATAA+AGG | - | chr2_1:62969826-62969845 | Msa0216760:intron | 20.0% |
| !!! | GATAAAAGCATAATGATAAA+GGG | - | chr2_1:62969827-62969846 | Msa0216760:intron | 20.0% |
| !! | ACATTGTAGTAGTTATTTAT+AGG | - | chr2_1:62969903-62969922 | Msa0216760:intron | 20.0% |
| !! | TTATCAAAAAATCCCTATAA+TGG | - | chr2_1:62970188-62970207 | Msa0216760:intron | 20.0% |
| !! | GTGCAAATATTTAAAAGATT+GGG | + | chr2_1:62970874-62970893 | None:intergenic | 20.0% |
| !! | AGTGCAAATATTTAAAAGAT+TGG | + | chr2_1:62970875-62970894 | None:intergenic | 20.0% |
| !! | GATTATTTATGTTCAATACT+TGG | - | chr2_1:62971464-62971483 | Msa0216760:CDS | 20.0% |
| !! | AACAAGTGTTAATTATATAG+TGG | - | chr2_1:62971673-62971692 | Msa0216760:CDS | 20.0% |
| !! | GAAATAATCCTATTTGAGAT+CGG | + | chr2_1:62967967-62967986 | None:intergenic | 25.0% |
| !! | TAGTTTGCAGAAGATAAATT+TGG | - | chr2_1:62968914-62968933 | Msa0216760:intron | 25.0% |
| !! | GTTACCAAACAATAACATTT+TGG | + | chr2_1:62969018-62969037 | None:intergenic | 25.0% |
| ! | TTCTTACTCAAAAGGAAATA+TGG | + | chr2_1:62969040-62969059 | None:intergenic | 25.0% |
| ! | CAATCACAATAGTAAAACAA+TGG | + | chr2_1:62969118-62969137 | None:intergenic | 25.0% |
| ! | CGTATAATCACTAAGAAATA+TGG | + | chr2_1:62969207-62969226 | None:intergenic | 25.0% |
| ! | CAACAATAGATTTCAATACA+AGG | + | chr2_1:62969308-62969327 | None:intergenic | 25.0% |
| ! | TTGTTACACATACCATTATA+GGG | + | chr2_1:62970203-62970222 | None:intergenic | 25.0% |
| !!! | TCTCTATTAAGTTTTAGAAG+AGG | + | chr2_1:62970675-62970694 | None:intergenic | 25.0% |
| ! | GGTTTATGATAAGTTACATA+GGG | + | chr2_1:62970853-62970872 | None:intergenic | 25.0% |
| !! | TTGAGTTTTCTATAAGCAAA+AGG | - | chr2_1:62971136-62971155 | Msa0216760:CDS | 25.0% |
| ! | AAGCAAAAGGATAGTATATA+AGG | - | chr2_1:62971149-62971168 | Msa0216760:CDS | 25.0% |
| GTAGTTTCTTGAGAAAACAA+CGG | + | chr2_1:62967627-62967646 | Msa0216750:CDS | 30.0% | |
| !! | GATAACAAACTTTTTCCCTT+GGG | + | chr2_1:62967687-62967706 | Msa0216750:CDS | 30.0% |
| !! | AGATAACAAACTTTTTCCCT+TGG | + | chr2_1:62967688-62967707 | Msa0216750:CDS | 30.0% |
| ! | TTGTTTTCTATTTCCATGGA+AGG | - | chr2_1:62968212-62968231 | Msa0216760:CDS | 30.0% |
| !! | TAAAACGAGCATTGATTTGA+AGG | + | chr2_1:62968273-62968292 | None:intergenic | 30.0% |
| ! | CAAATCAATGCTCGTTTTAT+CGG | - | chr2_1:62968274-62968293 | Msa0216760:CDS | 30.0% |
| TTATACTTGGATTCAAGCAT+TGG | - | chr2_1:62968324-62968343 | Msa0216760:intron | 30.0% | |
| TATACTTGGATTCAAGCATT+GGG | - | chr2_1:62968325-62968344 | Msa0216760:intron | 30.0% | |
| AAAAGTTGTGTGAATCAAAG+AGG | + | chr2_1:62968354-62968373 | None:intergenic | 30.0% | |
| CATCAGGAATCTGATAATTA+TGG | + | chr2_1:62968609-62968628 | None:intergenic | 30.0% | |
| !! | TGATGATTGTTTTGCTCATT+TGG | - | chr2_1:62968627-62968646 | Msa0216760:CDS | 30.0% |
| ATGACAATCTGAAGAAACAA+GGG | + | chr2_1:62968794-62968813 | None:intergenic | 30.0% | |
| ! | CTCTGAGAAAAAATGTTTGT+AGG | - | chr2_1:62968979-62968998 | Msa0216760:intron | 30.0% |
| !! | TATTGATTCAAACACAAGCA+TGG | - | chr2_1:62969330-62969349 | Msa0216760:intron | 30.0% |
| ! | ATTGATTCAAACACAAGCAT+GGG | - | chr2_1:62969331-62969350 | Msa0216760:intron | 30.0% |
| !!! | AAATTTTTTTACACGTGCGT+CGG | + | chr2_1:62969404-62969423 | None:intergenic | 30.0% |
| AGTAAGAGACATATAGAGAT+AGG | + | chr2_1:62970056-62970075 | None:intergenic | 30.0% | |
| TATGTCTCTTACTTTATTGC+AGG | - | chr2_1:62970063-62970082 | Msa0216760:intron | 30.0% | |
| GTTGTTACACATACCATTAT+AGG | + | chr2_1:62970204-62970223 | None:intergenic | 30.0% | |
| AAGTCTACTAAGCAATGTAT+GGG | + | chr2_1:62970408-62970427 | None:intergenic | 30.0% | |
| GTGGTTTAAGTCGAATTAAT+TGG | - | chr2_1:62970544-62970563 | Msa0216760:intron | 30.0% | |
| AACAGTTTAGCTATAGATCA+AGG | + | chr2_1:62970580-62970599 | None:intergenic | 30.0% | |
| !!! | TTAAGTTTTAGAAGAGGCTA+AGG | + | chr2_1:62970669-62970688 | None:intergenic | 30.0% |
| GGGTTTATGATAAGTTACAT+AGG | + | chr2_1:62970854-62970873 | None:intergenic | 30.0% | |
| ! | GATAATGAAAGTTGACTTAG+TGG | + | chr2_1:62971009-62971028 | None:intergenic | 30.0% |
| TGAATTGCTGGAATTATTTG+TGG | + | chr2_1:62971071-62971090 | None:intergenic | 30.0% | |
| CTTATAGAAAACTCAACAAG+TGG | + | chr2_1:62971132-62971151 | None:intergenic | 30.0% | |
| AAAGGATAGTATATAAGGTG+AGG | - | chr2_1:62971154-62971173 | Msa0216760:CDS | 30.0% | |
| CAAACAAGAGAAAATCATCA+TGG | - | chr2_1:62971203-62971222 | Msa0216760:CDS | 30.0% | |
| TCAGTTTCTTGAGAAAACAA+CGG | + | chr2_1:62971341-62971360 | None:intergenic | 30.0% | |
| ! | GATAGCAAACTTTGTCTTTT+GGG | + | chr2_1:62971401-62971420 | None:intergenic | 30.0% |
| ! | AGATAGCAAACTTTGTCTTT+TGG | + | chr2_1:62971402-62971421 | None:intergenic | 30.0% |
| !! | TAAAACGAGCATTGATTTGA+AGG | + | chr2_1:62968273-62968292 | None:intergenic | 30.0% |
| ! | CAAATCAATGCTCGTTTTAT+CGG | - | chr2_1:62968274-62968293 | Msa0216760:CDS | 30.0% |
| TTATACTTGGATTCAAGCAT+TGG | - | chr2_1:62968324-62968343 | Msa0216760:intron | 30.0% | |
| TATACTTGGATTCAAGCATT+GGG | - | chr2_1:62968325-62968344 | Msa0216760:intron | 30.0% | |
| AAAAGTTGTGTGAATCAAAG+AGG | + | chr2_1:62968354-62968373 | None:intergenic | 30.0% | |
| CATCAGGAATCTGATAATTA+TGG | + | chr2_1:62968609-62968628 | None:intergenic | 30.0% | |
| !! | TGATGATTGTTTTGCTCATT+TGG | - | chr2_1:62968627-62968646 | Msa0216760:CDS | 30.0% |
| AAGACAATCTGAAGAAACAA+GGG | + | chr2_1:62972359-62972378 | None:intergenic | 30.0% | |
| AAAACTAACATGCTCTCACT+AGG | + | chr2_1:62967837-62967856 | None:intergenic | 35.0% | |
| !!! | GCATGTTAGTTTTGCAAATG+TGG | - | chr2_1:62967844-62967863 | Msa0216760:CDS | 35.0% |
| ATGTTCTACCGATCTCAAAT+AGG | - | chr2_1:62967956-62967975 | Msa0216760:CDS | 35.0% | |
| GGTCGTAAAGCAAATTGTAA+TGG | - | chr2_1:62968142-62968161 | Msa0216760:CDS | 35.0% | |
| ! | GGCATTGTTTTCTATTTCCA+TGG | - | chr2_1:62968208-62968227 | Msa0216760:CDS | 35.0% |
| ! | TTTTCTATTTCCATGGAAGG+AGG | - | chr2_1:62968215-62968234 | Msa0216760:CDS | 35.0% |
| TGAATCCAAGTATAATCCCT+TGG | + | chr2_1:62968319-62968338 | None:intergenic | 35.0% | |
| ! | ATACTTGGATTCAAGCATTG+GGG | - | chr2_1:62968326-62968345 | Msa0216760:intron | 35.0% |
| TCATCATCCCAAATTGATGA+TGG | + | chr2_1:62968391-62968410 | None:intergenic | 35.0% | |
| ! | CATTTGAAGCTCTCTTATGA+CGG | - | chr2_1:62968418-62968437 | Msa0216760:intron | 35.0% |
| !!! | GACTCTAAGTTGATTTTCCT+CGG | + | chr2_1:62968488-62968507 | None:intergenic | 35.0% |
| CAGATATTTCAGCAACTTCT+GGG | + | chr2_1:62968549-62968568 | None:intergenic | 35.0% | |
| ACAGATATTTCAGCAACTTC+TGG | + | chr2_1:62968550-62968569 | None:intergenic | 35.0% | |
| TGCTGAAATATCTGTCAATG+TGG | - | chr2_1:62968555-62968574 | Msa0216760:CDS | 35.0% | |
| TGAGCAAAACAATCATCATC+AGG | + | chr2_1:62968625-62968644 | None:intergenic | 35.0% | |
| GATGTGCAGTTCAAATTCTA+TGG | - | chr2_1:62968649-62968668 | Msa0216760:intron | 35.0% | |
| ! | TCAGCCAGATTTTCAAAATC+CGG | - | chr2_1:62968711-62968730 | Msa0216760:intron | 35.0% |
| !! | TTTGCCGGATTTTGAAAATC+TGG | + | chr2_1:62968718-62968737 | None:intergenic | 35.0% |
| CATGACAATCTGAAGAAACA+AGG | + | chr2_1:62968795-62968814 | None:intergenic | 35.0% | |
| GTGGCCAAAATGTTATTGTT+TGG | - | chr2_1:62969011-62969030 | Msa0216760:intron | 35.0% | |
| ATGTTATGGGATGTACTCAA+TGG | - | chr2_1:62969159-62969178 | Msa0216760:intron | 35.0% | |
| TTCTTACACATGATATCGTC+AGG | + | chr2_1:62969250-62969269 | None:intergenic | 35.0% | |
| GCTAAAGTTTCTTCCAAAAC+CGG | + | chr2_1:62969627-62969646 | None:intergenic | 35.0% | |
| TTTAGCAACAAAGTTAGCCA+AGG | - | chr2_1:62969641-62969660 | Msa0216760:intron | 35.0% | |
| AACTGAACCTAATACTCTAC+TGG | + | chr2_1:62969761-62969780 | None:intergenic | 35.0% | |
| ! | AGTAGAGTATTAGGTTCAGT+TGG | - | chr2_1:62969760-62969779 | Msa0216760:intron | 35.0% |
| !! | GTATTAGGTTCAGTTGGTTT+TGG | - | chr2_1:62969766-62969785 | Msa0216760:intron | 35.0% |
| TTACAGAGTATAGTCTCACT+CGG | - | chr2_1:62969959-62969978 | Msa0216760:intron | 35.0% | |
| GACATATAGAGATAGGAATC+CGG | + | chr2_1:62970049-62970068 | None:intergenic | 35.0% | |
| TATTGCAGGTCCTATTTGTT+TGG | - | chr2_1:62970077-62970096 | Msa0216760:intron | 35.0% | |
| ATTGCAGGTCCTATTTGTTT+GGG | - | chr2_1:62970078-62970097 | Msa0216760:intron | 35.0% | |
| TATAACGTCACTAACCACAA+GGG | + | chr2_1:62970313-62970332 | None:intergenic | 35.0% | |
| TTATAACGTCACTAACCACA+AGG | + | chr2_1:62970314-62970333 | None:intergenic | 35.0% | |
| TGGTTAGTGACGTTATAAAC+AGG | - | chr2_1:62970316-62970335 | Msa0216760:intron | 35.0% | |
| ACGTTATAAACAGGAAACGT+GGG | - | chr2_1:62970325-62970344 | Msa0216760:intron | 35.0% | |
| CAAGTCTACTAAGCAATGTA+TGG | + | chr2_1:62970409-62970428 | None:intergenic | 35.0% | |
| CAGATAAGCGATTAGAGATT+AGG | + | chr2_1:62970505-62970524 | None:intergenic | 35.0% | |
| CCACTCAATTAACTCGAAAT+CGG | + | chr2_1:62970528-62970547 | None:intergenic | 35.0% | |
| ! | AGAGTTCAAAACGCAGATTT+TGG | - | chr2_1:62970721-62970740 | Msa0216760:intron | 35.0% |
| TGACTTTCAACCATGAAATG+TGG | + | chr2_1:62970948-62970967 | None:intergenic | 35.0% | |
| ! | GTTGACTTAGTGGTTTAGAA+TGG | + | chr2_1:62970999-62971018 | None:intergenic | 35.0% |
| !! | TTATGATAATGGTCGCAGTA+AGG | - | chr2_1:62971525-62971544 | Msa0216760:CDS | 35.0% |
| !! | TATGATAATGGTCGCAGTAA+GGG | - | chr2_1:62971526-62971545 | Msa0216760:CDS | 35.0% |
| CTTTGTGATCCTTGATATTG+CGG | - | chr2_1:62971558-62971577 | Msa0216760:intron | 35.0% | |
| AAAACAATGTGATCGCAATC+GGG | + | chr2_1:62971614-62971633 | None:intergenic | 35.0% | |
| CAAAACAATGTGATCGCAAT+CGG | + | chr2_1:62971615-62971634 | None:intergenic | 35.0% | |
| !! | TATATAGTGGATATGAGAGC+AGG | - | chr2_1:62971686-62971705 | Msa0216760:CDS | 35.0% |
| GGTCGTAAACCAAATTGTAA+TGG | - | chr2_1:62971707-62971726 | Msa0216760:CDS | 35.0% | |
| AAACCAAATTGTAATGGTCG+CGG | - | chr2_1:62971713-62971732 | Msa0216760:CDS | 35.0% | |
| ! | TTGTTTTCTACTTCCATGGA+AGG | - | chr2_1:62971777-62971796 | Msa0216760:CDS | 35.0% |
| TGAATCCAAGTATAATCCCT+TGG | + | chr2_1:62968319-62968338 | None:intergenic | 35.0% | |
| ! | ATACTTGGATTCAAGCATTG+GGG | - | chr2_1:62968326-62968345 | Msa0216760:intron | 35.0% |
| ! | CATTTGAAGCTCTCTTATGA+CGG | - | chr2_1:62968418-62968437 | Msa0216760:intron | 35.0% |
| !!! | GACTCTAAGTTGATTTTCCT+CGG | + | chr2_1:62968488-62968507 | None:intergenic | 35.0% |
| CAGATATTTCAGCAACTTCT+GGG | + | chr2_1:62968549-62968568 | None:intergenic | 35.0% | |
| ACAGATATTTCAGCAACTTC+TGG | + | chr2_1:62968550-62968569 | None:intergenic | 35.0% | |
| TGCTGAAATATCTGTCAATG+TGG | - | chr2_1:62968555-62968574 | Msa0216760:CDS | 35.0% | |
| TGAGCAAAACAATCATCATC+AGG | + | chr2_1:62968625-62968644 | None:intergenic | 35.0% | |
| GATGTGCAGTTCAAATTCTA+TGG | - | chr2_1:62968649-62968668 | Msa0216760:intron | 35.0% | |
| ! | TCAGCCAGATTTTCAAAATC+CGG | - | chr2_1:62968711-62968730 | Msa0216760:intron | 35.0% |
| !! | TTTGCCGGATTTTGAAAATC+TGG | + | chr2_1:62968718-62968737 | None:intergenic | 35.0% |
| CAAGACAATCTGAAGAAACA+AGG | + | chr2_1:62972360-62972379 | None:intergenic | 35.0% | |
| GGAGATTGAATATGGTATGA+TGG | - | chr2_1:62972423-62972442 | Msa0216760:CDS | 35.0% | |
| !! | ATATGGTATGATGGATTGCA+CGG | - | chr2_1:62972432-62972451 | Msa0216760:CDS | 35.0% |
| TGAGAAAACAACGGCTCTTA+CGG | + | chr2_1:62967618-62967637 | Msa0216750:CDS | 40.0% | |
| ATCTTGAAGGACATTGAGCA+GGG | + | chr2_1:62967654-62967673 | Msa0216750:CDS | 40.0% | |
| ! | TTGCACTGAGTTTTGCACAT+AGG | + | chr2_1:62967724-62967743 | None:intergenic | 40.0% |
| AAATCAAACGAGAGACCTCT+CGG | + | chr2_1:62967895-62967914 | None:intergenic | 40.0% | |
| AAAGCAAATTGTAATGGCCG+CGG | - | chr2_1:62968148-62968167 | Msa0216760:CDS | 40.0% | |
| !! | ACGAGCATTGATTTGAAGGT+TGG | + | chr2_1:62968269-62968288 | None:intergenic | 40.0% |
| !! | TACTTGGATTCAAGCATTGG+GGG | - | chr2_1:62968327-62968346 | Msa0216760:intron | 40.0% |
| AAGCCACACCATCATCAATT+TGG | - | chr2_1:62968380-62968399 | Msa0216760:intron | 40.0% | |
| AGCCACACCATCATCAATTT+GGG | - | chr2_1:62968381-62968400 | Msa0216760:intron | 40.0% | |
| !! | ATCCCAAATTGATGATGGTG+TGG | + | chr2_1:62968386-62968405 | None:intergenic | 40.0% |
| CGTCATAAGAGAGCTTCAAA+TGG | + | chr2_1:62968420-62968439 | None:intergenic | 40.0% | |
| GAGAGAACATCGAATGAGAA+CGG | - | chr2_1:62968508-62968527 | Msa0216760:intron | 40.0% | |
| GGTTTATCGTCCAAAGTTGA+AGG | - | chr2_1:62968670-62968689 | Msa0216760:intron | 40.0% | |
| TCCAAAGTTGAAGGAGTTCT+TGG | - | chr2_1:62968679-62968698 | Msa0216760:intron | 40.0% | |
| ACCAAGAACTCCTTCAACTT+TGG | + | chr2_1:62968683-62968702 | None:intergenic | 40.0% | |
| AAGTTGAAGGAGTTCTTGGT+AGG | - | chr2_1:62968683-62968702 | Msa0216760:intron | 40.0% | |
| ATCTGAAGAAACAAGGGATG+TGG | + | chr2_1:62968788-62968807 | None:intergenic | 40.0% | |
| TTCTGCTAAAGATTCAGTGC+AGG | - | chr2_1:62968828-62968847 | Msa0216760:intron | 40.0% | |
| ! | GAAGGCATGGAGATTGAATA+TGG | - | chr2_1:62968850-62968869 | Msa0216760:intron | 40.0% |
| GGAGATTGAATATGGCATGA+TGG | - | chr2_1:62968858-62968877 | Msa0216760:intron | 40.0% | |
| AACTATACCATTACCACTGC+TGG | + | chr2_1:62968899-62968918 | None:intergenic | 40.0% | |
| TGTTTGTAGGTTGTACTCAG+TGG | - | chr2_1:62968992-62969011 | Msa0216760:intron | 40.0% | |
| ATATCGTCAGGTATGAGTTG+AGG | + | chr2_1:62969238-62969257 | None:intergenic | 40.0% | |
| AGAACAAGGTTGTACTCATG+CGG | + | chr2_1:62969430-62969449 | None:intergenic | 40.0% | |
| GAGGAAATCAGTCAATACCT+TGG | + | chr2_1:62969661-62969680 | None:intergenic | 40.0% | |
| AAGAAAAGGAAACACGGTTG+AGG | + | chr2_1:62969680-62969699 | None:intergenic | 40.0% | |
| CGCTTGAAGAAAAGGAAACA+CGG | + | chr2_1:62969686-62969705 | None:intergenic | 40.0% | |
| ACGTCAATCGCTTGAAGAAA+AGG | + | chr2_1:62969694-62969713 | None:intergenic | 40.0% | |
| ! | AACTGCTCCAGTAGAGTATT+AGG | - | chr2_1:62969751-62969770 | Msa0216760:intron | 40.0% |
| ATAGGCAAAACTATTCCAGC+TGG | - | chr2_1:62969921-62969940 | Msa0216760:intron | 40.0% | |
| !! | CTCTGTAAGCCATGTCATTT+TGG | + | chr2_1:62969947-62969966 | None:intergenic | 40.0% |
| GTGTTTGTTTCCTCTCATTG+AGG | - | chr2_1:62969998-62970017 | Msa0216760:intron | 40.0% | |
| ATGTGCTGTCCCAAACAAAT+AGG | + | chr2_1:62970090-62970109 | None:intergenic | 40.0% | |
| TAATGGGAAGTTGCACACTA+CGG | + | chr2_1:62970268-62970287 | None:intergenic | 40.0% | |
| AGTACGGACACACGTTTAAT+GGG | + | chr2_1:62970284-62970303 | None:intergenic | 40.0% | |
| GACGTTATAAACAGGAAACG+TGG | - | chr2_1:62970324-62970343 | Msa0216760:intron | 40.0% | |
| AAGGCTATAGCAACGTAACT+CGG | + | chr2_1:62970449-62970468 | None:intergenic | 40.0% | |
| !! | CCGATTTCGAGTTAATTGAG+TGG | - | chr2_1:62970525-62970544 | Msa0216760:intron | 40.0% |
| !! | GTTTTGAACTCTGTGTCACT+TGG | + | chr2_1:62970713-62970732 | None:intergenic | 40.0% |
| TTACCGAAAGCCACATTTCA+TGG | - | chr2_1:62970935-62970954 | Msa0216760:intron | 40.0% | |
| CAACCATGAAATGTGGCTTT+CGG | + | chr2_1:62970941-62970960 | None:intergenic | 40.0% | |
| TGAGAAAACAACGGCTCTTA+CGG | + | chr2_1:62967618-62967637 | Msa0216750:CDS | 40.0% | |
| !!! | ACTTTGTCTTTTGGGTTAGC+TGG | + | chr2_1:62971393-62971412 | None:intergenic | 40.0% |
| TCATGGTCAAATGTGACTGA+TGG | - | chr2_1:62971585-62971604 | Msa0216760:intron | 40.0% | |
| AAACAATGTGATCGCAATCG+GGG | + | chr2_1:62971613-62971632 | None:intergenic | 40.0% | |
| ! | GGCATTGTTTTCTACTTCCA+TGG | - | chr2_1:62971773-62971792 | Msa0216760:CDS | 40.0% |
| ! | TTTTCTACTTCCATGGAAGG+AGG | - | chr2_1:62971780-62971799 | Msa0216760:CDS | 40.0% |
| !! | TACTTGGATTCAAGCATTGG+GGG | - | chr2_1:62968327-62968346 | Msa0216760:intron | 40.0% |
| AAGCCACACCATCATCAATT+TGG | - | chr2_1:62968380-62968399 | Msa0216760:intron | 40.0% | |
| AGCCACACCATCATCAATTT+GGG | - | chr2_1:62968381-62968400 | Msa0216760:intron | 40.0% | |
| !! | ATCCCAAATTGATGATGGTG+TGG | + | chr2_1:62968386-62968405 | None:intergenic | 40.0% |
| TCGTCATCCCAAATTGATGA+TGG | + | chr2_1:62971956-62971975 | None:intergenic | 40.0% | |
| CGTCATAAGAGAGCTTCAAA+TGG | + | chr2_1:62968420-62968439 | None:intergenic | 40.0% | |
| GAGAGAACATCGAATGAGAA+CGG | - | chr2_1:62968508-62968527 | Msa0216760:intron | 40.0% | |
| GGTTTATCGTCCAAAGTTGA+AGG | - | chr2_1:62968670-62968689 | Msa0216760:intron | 40.0% | |
| TCCAAAGTTGAAGGAGTTCT+TGG | - | chr2_1:62968679-62968698 | Msa0216760:intron | 40.0% | |
| TCCAAGAACTCCTTCAACTT+TGG | + | chr2_1:62972248-62972267 | None:intergenic | 40.0% | |
| ATCTGAAGAAACAAGGGATG+TGG | + | chr2_1:62968788-62968807 | None:intergenic | 40.0% | |
| TTCTGCTAAAGATTCAGTGC+AGG | - | chr2_1:62968828-62968847 | Msa0216760:intron | 40.0% | |
| GAAGGCTTGGAGATTGAATA+TGG | - | chr2_1:62972415-62972434 | Msa0216760:CDS | 40.0% | |
| !! | TATGGTATGATGGATTGCAC+GGG | - | chr2_1:62972433-62972452 | Msa0216760:CDS | 40.0% |
| AACTATACCATTACCACTGC+TGG | + | chr2_1:62968899-62968918 | None:intergenic | 40.0% | |
| AAAACAACGGCTCTTACGGT+TGG | + | chr2_1:62967614-62967633 | Msa0216750:CDS | 45.0% | |
| GATCTTGAAGGACATTGAGC+AGG | + | chr2_1:62967655-62967674 | Msa0216750:CDS | 45.0% | |
| AAGATCACCAGCTAACCCAA+GGG | - | chr2_1:62967669-62967688 | Msa0216760:CDS | 45.0% | |
| !!! | ACTTTTTCCCTTGGGTTAGC+TGG | + | chr2_1:62967679-62967698 | Msa0216750:CDS | 45.0% |
| CAAAGATACTCGTTACCGAG+AGG | - | chr2_1:62967877-62967896 | Msa0216760:CDS | 45.0% | |
| AATGCTCATTCCTCCTTCCA+TGG | + | chr2_1:62968228-62968247 | None:intergenic | 45.0% | |
| GAGGAATGAGCATTTCAGCT+TGG | - | chr2_1:62968234-62968253 | Msa0216760:CDS | 45.0% | |
| ! | ATGCTCGTTTTATCGGCCTT+AGG | - | chr2_1:62968281-62968300 | Msa0216760:intron | 45.0% |
| GGAGACCAAGGGATTATACT+TGG | - | chr2_1:62968311-62968330 | Msa0216760:intron | 45.0% | |
| ! | GAAGCTCTCTTATGACGGAA+AGG | - | chr2_1:62968423-62968442 | Msa0216760:intron | 45.0% |
| AAGGATCTCGTAATCCCTGA+AGG | - | chr2_1:62968442-62968461 | Msa0216760:intron | 45.0% | |
| ! | ATCGAATGAGAACGGTGTCA+TGG | - | chr2_1:62968516-62968535 | Msa0216760:intron | 45.0% |
| ATGGATTCTACTGTCCTCCT+TGG | + | chr2_1:62968590-62968609 | None:intergenic | 45.0% | |
| TTTCAAAATCCGGCAAAGCC+AGG | - | chr2_1:62968721-62968740 | Msa0216760:intron | 45.0% | |
| GCTAAAGATTCAGTGCAGGA+AGG | - | chr2_1:62968832-62968851 | Msa0216760:intron | 45.0% | |
| !! | TATGGCATGATGGATTGCAC+AGG | - | chr2_1:62968868-62968887 | Msa0216760:intron | 45.0% |
| TGAGTACAACCTTGTTCTCG+AGG | - | chr2_1:62969432-62969451 | Msa0216760:intron | 45.0% | |
| TACAACCTTGTTCTCGAGGA+AGG | - | chr2_1:62969436-62969455 | Msa0216760:intron | 45.0% | |
| ACATGAGTCTGATCAAGTGC+AGG | - | chr2_1:62969600-62969619 | Msa0216760:intron | 45.0% | |
| AACGGATAACGTCGTGAAGT+GGG | + | chr2_1:62970237-62970256 | None:intergenic | 45.0% | |
| GAGTACGGACACACGTTTAA+TGG | + | chr2_1:62970285-62970304 | None:intergenic | 45.0% | |
| AGGCTATAGCAACGTAACTC+GGG | + | chr2_1:62970448-62970467 | None:intergenic | 45.0% | |
| ACGTGAGTGAGATGAATTGC+TGG | + | chr2_1:62971083-62971102 | None:intergenic | 45.0% | |
| AAAACAACGGCTCTTACGGT+TGG | + | chr2_1:62967614-62967633 | Msa0216750:CDS | 45.0% | |
| !! | ATCTTGAAGGGCACTGAGTA+GGG | + | chr2_1:62971368-62971387 | None:intergenic | 45.0% |
| ! | GGTTAGCTGGTGATCTTGAA+GGG | + | chr2_1:62967666-62967685 | Msa0216750:CDS | 45.0% |
| ! | TTGCACTGAGTTTTGCACAC+AGG | + | chr2_1:62971438-62971457 | None:intergenic | 45.0% |
| CATGACTCTCCGCAATATCA+AGG | + | chr2_1:62971570-62971589 | None:intergenic | 45.0% | |
| CTTGATATTGCGGAGAGTCA+TGG | - | chr2_1:62971568-62971587 | Msa0216760:intron | 45.0% | |
| GATCCGCGACCATTACAATT+TGG | + | chr2_1:62971719-62971738 | None:intergenic | 45.0% | |
| ! | ATGCTCGTTTTATCGGCCTT+AGG | - | chr2_1:62968281-62968300 | Msa0216760:intron | 45.0% |
| GGAGACCAAGGGATTATACT+TGG | - | chr2_1:62968311-62968330 | Msa0216760:intron | 45.0% | |
| ! | GAAGCTCTCTTATGACGGAA+AGG | - | chr2_1:62968423-62968442 | Msa0216760:intron | 45.0% |
| AAGGATCTCGTAATCCCTGA+AGG | - | chr2_1:62968442-62968461 | Msa0216760:intron | 45.0% | |
| ! | ATCGAATGAGAACGGTGTCA+TGG | - | chr2_1:62968516-62968535 | Msa0216760:intron | 45.0% |
| ATGGATTCTACTGTCCTCCT+TGG | + | chr2_1:62968590-62968609 | None:intergenic | 45.0% | |
| TTTCAAAATCCGGCAAAGCC+AGG | - | chr2_1:62968721-62968740 | Msa0216760:intron | 45.0% | |
| GCTAAAGATTCAGTGCAGGA+AGG | - | chr2_1:62968832-62968851 | Msa0216760:intron | 45.0% | |
| !! | GGGTTAGCTGGTGATCTTGA+AGG | + | chr2_1:62967667-62967686 | Msa0216750:CDS | 50.0% |
| CAAGATCACCAGCTAACCCA+AGG | - | chr2_1:62967668-62967687 | Msa0216760:CDS | 50.0% | |
| TAATCCCTTGGTCTCCCTTG+CGG | + | chr2_1:62968307-62968326 | None:intergenic | 50.0% | |
| ACGTAGAGAGGTGACCTTCA+GGG | + | chr2_1:62968459-62968478 | None:intergenic | 50.0% | |
| TGGCTATGCCAGTAGTTGGA+GGG | - | chr2_1:62968746-62968765 | Msa0216760:intron | 50.0% | |
| TTGTCTTCCCCTCCAACTAC+TGG | + | chr2_1:62968757-62968776 | None:intergenic | 50.0% | |
| AGATTCAGTGCAGGAAGGCA+TGG | - | chr2_1:62968837-62968856 | Msa0216760:intron | 50.0% | |
| !! | ACACGTGCGTCGGTCATTTT+GGG | + | chr2_1:62969394-62969413 | None:intergenic | 50.0% |
| !! | TACACGTGCGTCGGTCATTT+TGG | + | chr2_1:62969395-62969414 | None:intergenic | 50.0% |
| CTTGTTCTCGAGGAAGGACA+GGG | - | chr2_1:62969442-62969461 | Msa0216760:intron | 50.0% | |
| TGATCAGACTCATGTGCGCA+CGG | + | chr2_1:62969595-62969614 | None:intergenic | 50.0% | |
| AGTCTGATCAAGTGCAGGAC+CGG | - | chr2_1:62969605-62969624 | Msa0216760:intron | 50.0% | |
| !! | ATCAAGTGCAGGACCGGTTT+TGG | - | chr2_1:62969611-62969630 | Msa0216760:intron | 50.0% |
| TGAACTATGTCCCTCAGCTC+TGG | - | chr2_1:62969721-62969740 | Msa0216760:intron | 50.0% | |
| GAACTATGTCCCTCAGCTCT+GGG | - | chr2_1:62969722-62969741 | Msa0216760:intron | 50.0% | |
| GTTAAGCAACCCAGAGCTGA+GGG | + | chr2_1:62969734-62969753 | None:intergenic | 50.0% | |
| AGTTAAGCAACCCAGAGCTG+AGG | + | chr2_1:62969735-62969754 | None:intergenic | 50.0% | |
| TCCAGCTGGCCAAAATGACA+TGG | - | chr2_1:62969935-62969954 | Msa0216760:intron | 50.0% | |
| ! | GTCTCACTCGGCAATTTTCG+TGG | - | chr2_1:62969971-62969990 | Msa0216760:intron | 50.0% |
| GCTACGATCACCTCAATGAG+AGG | + | chr2_1:62970011-62970030 | None:intergenic | 50.0% | |
| ATAGGAATCCGGCAGCTGAA+CGG | + | chr2_1:62970038-62970057 | None:intergenic | 50.0% | |
| CAACGGATAACGTCGTGAAG+TGG | + | chr2_1:62970238-62970257 | None:intergenic | 50.0% | |
| CACGACGTTATCCGTTGACA+AGG | - | chr2_1:62970241-62970260 | Msa0216760:intron | 50.0% | |
| CACACTACGGACCTTGTCAA+CGG | + | chr2_1:62970255-62970274 | None:intergenic | 50.0% | |
| ACCACAAGGGACGATGAGTA+CGG | + | chr2_1:62970300-62970319 | None:intergenic | 50.0% | |
| GCTGAAGGAAGGTTAGGCAA+AGG | + | chr2_1:62970468-62970487 | None:intergenic | 50.0% | |
| TTGCCTAACCTTCCTTCAGC+TGG | - | chr2_1:62970468-62970487 | Msa0216760:intron | 50.0% | |
| TGCCTAACCTTCCTTCAGCT+GGG | - | chr2_1:62970469-62970488 | Msa0216760:intron | 50.0% | |
| GAAGAGGCTAAGGATGTGCT+GGG | + | chr2_1:62970659-62970678 | None:intergenic | 50.0% | |
| AGAAGAGGCTAAGGATGTGC+TGG | + | chr2_1:62970660-62970679 | None:intergenic | 50.0% | |
| !! | GATCTTGAAGGGCACTGAGT+AGG | + | chr2_1:62971369-62971388 | None:intergenic | 50.0% |
| !! | GGGTTAGCTGGTGATCTTGA+AGG | + | chr2_1:62967667-62967686 | Msa0216750:CDS | 50.0% |
| AGTGCTCATTCCTCCTTCCA+TGG | + | chr2_1:62971793-62971812 | None:intergenic | 50.0% | |
| GAGGAATGAGCACTTCAGCT+TGG | - | chr2_1:62971799-62971818 | Msa0216760:CDS | 50.0% | |
| TAATCCCTTGGTCTCCCTTG+CGG | + | chr2_1:62968307-62968326 | None:intergenic | 50.0% | |
| ACGTAGAGAGGTGACCTTCA+GGG | + | chr2_1:62968459-62968478 | None:intergenic | 50.0% | |
| TTGTCTTCCCCTCCAATGAC+CGG | + | chr2_1:62972322-62972341 | None:intergenic | 50.0% | |
| AGATTCAGTGCAGGAAGGCT+TGG | - | chr2_1:62972402-62972421 | Msa0216760:CDS | 50.0% | |
| GAAGGACATTGAGCAGGGCA+AGG | + | chr2_1:62967649-62967668 | Msa0216750:CDS | 55.0% | |
| TGCTTGGACCCTCGTTTCGT+TGG | - | chr2_1:62968178-62968197 | Msa0216760:CDS | 55.0% | |
| CATCCGCACCAACGAAACGA+GGG | + | chr2_1:62968189-62968208 | None:intergenic | 55.0% | |
| TTTATCGGCCTTAGGCCGCA+AGG | - | chr2_1:62968289-62968308 | Msa0216760:intron | 55.0% | |
| TTATCGGCCTTAGGCCGCAA+GGG | - | chr2_1:62968290-62968309 | Msa0216760:intron | 55.0% | |
| CACGTAGAGAGGTGACCTTC+AGG | + | chr2_1:62968460-62968479 | None:intergenic | 55.0% | |
| CTGAAGGTCACCTCTCTACG+TGG | - | chr2_1:62968458-62968477 | Msa0216760:intron | 55.0% | |
| CAATGTGGTGCCTGTCACCA+AGG | - | chr2_1:62968570-62968589 | Msa0216760:CDS | 55.0% | |
| ! | CTACTGTCCTCCTTGGTGAC+AGG | + | chr2_1:62968583-62968602 | None:intergenic | 55.0% |
| AAATCCGGCAAAGCCAGGTG+TGG | - | chr2_1:62968726-62968745 | Msa0216760:intron | 55.0% | |
| !! | ATAGCCACACCTGGCTTTGC+CGG | + | chr2_1:62968733-62968752 | None:intergenic | 55.0% |
| ACTACTGGCATAGCCACACC+TGG | + | chr2_1:62968742-62968761 | None:intergenic | 55.0% | |
| GGTGTGGCTATGCCAGTAGT+TGG | - | chr2_1:62968742-62968761 | Msa0216760:intron | 55.0% | |
| GTGGCTATGCCAGTAGTTGG+AGG | - | chr2_1:62968745-62968764 | Msa0216760:intron | 55.0% | |
| GGCTATGCCAGTAGTTGGAG+GGG | - | chr2_1:62968747-62968766 | Msa0216760:intron | 55.0% | |
| !! | GGCATGATGGATTGCACAGG+TGG | - | chr2_1:62968871-62968890 | Msa0216760:intron | 55.0% |
| !!! | GTCGGTCATTTTGGGGCTGA+GGG | + | chr2_1:62969386-62969405 | None:intergenic | 55.0% |
| !! | CACGTGCGTCGGTCATTTTG+GGG | + | chr2_1:62969393-62969412 | None:intergenic | 55.0% |
| CCTGTCCTTCCTCGAGAACA+AGG | + | chr2_1:62969444-62969463 | None:intergenic | 55.0% | |
| CCTTGTTCTCGAGGAAGGAC+AGG | - | chr2_1:62969441-62969460 | Msa0216760:intron | 55.0% | |
| !!! | GCCATGTCATTTTGGCCAGC+TGG | + | chr2_1:62969939-62969958 | None:intergenic | 55.0% |
| TAGGAATCCGGCAGCTGAAC+GGG | + | chr2_1:62970037-62970056 | None:intergenic | 55.0% | |
| TCCGTACTCATCGTCCCTTG+TGG | - | chr2_1:62970296-62970315 | Msa0216760:intron | 55.0% | |
| CTCCCAGCTGAAGGAAGGTT+AGG | + | chr2_1:62970474-62970493 | None:intergenic | 55.0% | |
| CTAACCTTCCTTCAGCTGGG+AGG | - | chr2_1:62970472-62970491 | Msa0216760:intron | 55.0% | |
| GTTTCCTCCCAGCTGAAGGA+AGG | + | chr2_1:62970479-62970498 | None:intergenic | 55.0% | |
| GATCTGCATGCTTGGACCCT+CGG | - | chr2_1:62971735-62971754 | Msa0216760:CDS | 55.0% | |
| TTTATCGGCCTTAGGCCGCA+AGG | - | chr2_1:62968289-62968308 | Msa0216760:intron | 55.0% | |
| TTATCGGCCTTAGGCCGCAA+GGG | - | chr2_1:62968290-62968309 | Msa0216760:intron | 55.0% | |
| CACGTAGAGAGGTGACCTTC+AGG | + | chr2_1:62968460-62968479 | None:intergenic | 55.0% | |
| CTGAAGGTCACCTCTCTACG+TGG | - | chr2_1:62968458-62968477 | Msa0216760:intron | 55.0% | |
| CAATGTGGTGCCTGTCACCA+AGG | - | chr2_1:62968570-62968589 | Msa0216760:CDS | 55.0% | |
| ! | CTACTGTCCTCCTTGGTGAC+AGG | + | chr2_1:62968583-62968602 | None:intergenic | 55.0% |
| TGGCAATGCCGGTCATTGGA+GGG | - | chr2_1:62972311-62972330 | Msa0216760:CDS | 55.0% | |
| !! | GGTATGATGGATTGCACGGG+TGG | - | chr2_1:62972436-62972455 | Msa0216760:CDS | 55.0% |
| GGACCCTCGTTTCGTTGGTG+CGG | - | chr2_1:62968183-62968202 | Msa0216760:CDS | 60.0% | |
| CCATCCGCACCAACGAAACG+AGG | + | chr2_1:62968190-62968209 | None:intergenic | 60.0% | |
| CCTCGTTTCGTTGGTGCGGA+TGG | - | chr2_1:62968187-62968206 | Msa0216760:CDS | 60.0% | |
| TTGGTCTCCCTTGCGGCCTA+AGG | + | chr2_1:62968300-62968319 | None:intergenic | 60.0% | |
| TTAGGCCGCAAGGGAGACCA+AGG | - | chr2_1:62968299-62968318 | Msa0216760:intron | 60.0% | |
| TAGGCCGCAAGGGAGACCAA+GGG | - | chr2_1:62968300-62968319 | Msa0216760:intron | 60.0% | |
| CCTCGGATTGCCACGTAGAG+AGG | + | chr2_1:62968471-62968490 | None:intergenic | 60.0% | |
| CCTCTCTACGTGGCAATCCG+AGG | - | chr2_1:62968468-62968487 | Msa0216760:intron | 60.0% | |
| TGTGGTGCCTGTCACCAAGG+AGG | - | chr2_1:62968573-62968592 | Msa0216760:CDS | 60.0% | |
| ! | GGTGGTGCCAGCAGTGGTAA+TGG | - | chr2_1:62968889-62968908 | Msa0216760:intron | 60.0% |
| !!! | CGTCGGTCATTTTGGGGCTG+AGG | + | chr2_1:62969387-62969406 | None:intergenic | 60.0% |
| GGAAGGACAGGGTTCAACGC+TGG | - | chr2_1:62969453-62969472 | Msa0216760:intron | 60.0% | |
| CATGTGCGCACGGCAGTTGA+AGG | + | chr2_1:62969585-62969604 | None:intergenic | 60.0% | |
| AGGAATCCGGCAGCTGAACG+GGG | + | chr2_1:62970036-62970055 | None:intergenic | 60.0% | |
| GCGAGTTTCCTCCCAGCTGA+AGG | + | chr2_1:62970483-62970502 | None:intergenic | 60.0% | |
| TGGTCGCGGATCTGCATGCT+TGG | - | chr2_1:62971727-62971746 | Msa0216760:CDS | 60.0% | |
| ! | TGCTTGGACCCTCGGTTCGT+TGG | - | chr2_1:62971743-62971762 | Msa0216760:CDS | 60.0% |
| CATCCGCACCAACGAACCGA+GGG | + | chr2_1:62971754-62971773 | None:intergenic | 60.0% | |
| TTGGTCTCCCTTGCGGCCTA+AGG | + | chr2_1:62968300-62968319 | None:intergenic | 60.0% | |
| TTAGGCCGCAAGGGAGACCA+AGG | - | chr2_1:62968299-62968318 | Msa0216760:intron | 60.0% | |
| TAGGCCGCAAGGGAGACCAA+GGG | - | chr2_1:62968300-62968319 | Msa0216760:intron | 60.0% | |
| CCTCGGATTGCCACGTAGAG+AGG | + | chr2_1:62968471-62968490 | None:intergenic | 60.0% | |
| CCTCTCTACGTGGCAATCCG+AGG | - | chr2_1:62968468-62968487 | Msa0216760:intron | 60.0% | |
| TGTGGTGCCTGTCACCAAGG+AGG | - | chr2_1:62968573-62968592 | Msa0216760:CDS | 60.0% | |
| AAATCCGGCAAAGCCAGGCG+TGG | - | chr2_1:62972291-62972310 | Msa0216760:CDS | 60.0% | |
| !! | ATTGCCACGCCTGGCTTTGC+CGG | + | chr2_1:62972298-62972317 | None:intergenic | 60.0% |
| AAAGCCAGGCGTGGCAATGC+CGG | - | chr2_1:62972300-62972319 | Msa0216760:CDS | 60.0% | |
| GTGGCAATGCCGGTCATTGG+AGG | - | chr2_1:62972310-62972329 | Msa0216760:CDS | 60.0% | |
| GGCAATGCCGGTCATTGGAG+GGG | - | chr2_1:62972312-62972331 | Msa0216760:CDS | 60.0% | |
| GGTCCAAGCACGCAGATCCG+CGG | + | chr2_1:62968168-62968187 | None:intergenic | 65.0% | |
| ! | TGCACAGGTGGTGCCAGCAG+TGG | - | chr2_1:62968883-62968902 | Msa0216760:intron | 65.0% |
| TAGCACCCCCGTTCAGCTGC+CGG | - | chr2_1:62970027-62970046 | Msa0216760:intron | 65.0% | |
| GGAATCCGGCAGCTGAACGG+GGG | + | chr2_1:62970035-62970054 | None:intergenic | 65.0% | |
| ! | GGACCCTCGGTTCGTTGGTG+CGG | - | chr2_1:62971748-62971767 | Msa0216760:CDS | 65.0% |
| CCATCCGCACCAACGAACCG+AGG | + | chr2_1:62971755-62971774 | None:intergenic | 65.0% | |
| ! | CCTCGGTTCGTTGGTGCGGA+TGG | - | chr2_1:62971752-62971771 | Msa0216760:CDS | 65.0% |
| ATGACCGGCATTGCCACGCC+TGG | + | chr2_1:62972307-62972326 | None:intergenic | 65.0% | |
| GGCGTGGCAATGCCGGTCAT+TGG | - | chr2_1:62972307-62972326 | Msa0216760:CDS | 65.0% | |
| GGTGGCGCCAGCAGTGGTAA+TGG | - | chr2_1:62972454-62972473 | Msa0216760:CDS | 65.0% | |
| TGGCCGCGGATCTGCGTGCT+TGG | - | chr2_1:62968162-62968181 | Msa0216760:CDS | 70.0% | |
| TGCACGGGTGGCGCCAGCAG+TGG | - | chr2_1:62972448-62972467 | Msa0216760:CDS | 75.0% |
| Chromosome | Type | Strat | End | Strand | Name |
|---|---|---|---|---|---|
| chr2_1 | gene | 62967508 | 62972495 | 62967508 | ID=Msa0216760;Name=Msa0216760 |
| chr2_1 | mRNA | 62967508 | 62972495 | 62967508 | ID=Msa0216760-mRNA-1;Parent=Msa0216760;Name=Msa0216760-mRNA-1;_AED=0.06;_eAED=0.06;_QI=0|0|0|1|0.2|0.16|6|0|601 |
| chr2_1 | exon | 62972258 | 62972495 | 62972258 | ID=Msa0216760-mRNA-1:exon:17443;Parent=Msa0216760-mRNA-1 |
| chr2_1 | exon | 62971655 | 62971860 | 62971655 | ID=Msa0216760-mRNA-1:exon:17442;Parent=Msa0216760-mRNA-1 |
| chr2_1 | exon | 62971333 | 62971576 | 62971333 | ID=Msa0216760-mRNA-1:exon:17441;Parent=Msa0216760-mRNA-1 |
| chr2_1 | exon | 62971088 | 62971311 | 62971088 | ID=Msa0216760-mRNA-1:exon:17440;Parent=Msa0216760-mRNA-1 |
| chr2_1 | exon | 62968544 | 62968649 | 62968544 | ID=Msa0216760-mRNA-1:exon:17439;Parent=Msa0216760-mRNA-1 |
| chr2_1 | exon | 62967508 | 62968295 | 62967508 | ID=Msa0216760-mRNA-1:exon:17438;Parent=Msa0216760-mRNA-1 |
| chr2_1 | CDS | 62972258 | 62972495 | 62972258 | ID=Msa0216760-mRNA-1:cds;Parent=Msa0216760-mRNA-1 |
| chr2_1 | CDS | 62971655 | 62971860 | 62971655 | ID=Msa0216760-mRNA-1:cds;Parent=Msa0216760-mRNA-1 |
| chr2_1 | CDS | 62971333 | 62971576 | 62971333 | ID=Msa0216760-mRNA-1:cds;Parent=Msa0216760-mRNA-1 |
| chr2_1 | CDS | 62971088 | 62971311 | 62971088 | ID=Msa0216760-mRNA-1:cds;Parent=Msa0216760-mRNA-1 |
| chr2_1 | CDS | 62968544 | 62968649 | 62968544 | ID=Msa0216760-mRNA-1:cds;Parent=Msa0216760-mRNA-1 |
| chr2_1 | CDS | 62967508 | 62968295 | 62967508 | ID=Msa0216760-mRNA-1:cds;Parent=Msa0216760-mRNA-1 |
| Gene Sequence |
| Protein sequence |
