Alfalfa Gene Editing Database
Alfalfa Gene Editing Database
| Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa0295980 | KAG5546319.1 | 63.535 | 628 | 170 | 6 | 33 | 601 | 30 | 657 | 0.0 | 819 |
| Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|
| Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa0295980 | A0A5B6VEY8 | 58.234 | 668 | 200 | 6 | 12 | 601 | 8 | 674 | 0.0 | 803 |
| Msa0295980 | A0A5B6VEY8 | 59.821 | 336 | 130 | 2 | 264 | 598 | 3 | 334 | 3.75e-137 | 424 |
| Gene ID | Type | Classification |
|---|
| Gene ID | Type | Classification |
|---|
Co-expression Network
| Gene1 | Gene2 | correlation coefficient | p_value | FDR |
|---|---|---|---|---|
| Msa0012780 | Msa0295980 | 0.824889 | 6.321076e-54 | -8.615850e-47 |
| Msa0012820 | Msa0295980 | 0.826063 | 3.331832e-54 | -8.615850e-47 |
| Msa0014590 | Msa0295980 | 0.800841 | 1.192863e-48 | -8.615850e-47 |
| Msa0025700 | Msa0295980 | 0.813341 | 2.688999e-51 | -8.615850e-47 |
| Msa0045850 | Msa0295980 | 0.825926 | 3.591640e-54 | -8.615850e-47 |
| Msa0046240 | Msa0295980 | 0.807236 | 5.577292e-50 | -8.615850e-47 |
| Msa0048950 | Msa0295980 | 0.832451 | 9.382356e-56 | -8.615850e-47 |
| Msa0059880 | Msa0295980 | 0.841909 | 3.568988e-58 | -8.615850e-47 |
| Msa0061590 | Msa0295980 | 0.806191 | 9.273500e-50 | -8.615850e-47 |
| Msa0061600 | Msa0295980 | 0.855948 | 4.478876e-62 | -8.615850e-47 |
| Msa0072030 | Msa0295980 | 0.817496 | 3.200458e-52 | -8.615850e-47 |
| Msa0101170 | Msa0295980 | 0.801450 | 8.951790e-49 | -8.615850e-47 |
| Msa0106110 | Msa0295980 | 0.822183 | 2.715212e-53 | -8.615850e-47 |
| Msa0106120 | Msa0295980 | 0.823036 | 1.719147e-53 | -8.615850e-47 |
| Msa0106130 | Msa0295980 | 0.838767 | 2.364233e-57 | -8.615850e-47 |
| Msa0108350 | Msa0295980 | 0.805793 | 1.124599e-49 | -8.615850e-47 |
| Msa0139460 | Msa0295980 | 0.844383 | 7.823085e-59 | -8.615850e-47 |
| Msa0140270 | Msa0295980 | 0.804595 | 2.003240e-49 | -8.615850e-47 |
| Msa0150910 | Msa0295980 | 0.836491 | 9.072602e-57 | -8.615850e-47 |
| Msa0152640 | Msa0295980 | 0.801245 | 9.861239e-49 | -8.615850e-47 |
| Msa0152660 | Msa0295980 | 0.805899 | 1.068242e-49 | -8.615850e-47 |
| Msa0152740 | Msa0295980 | 0.848296 | 6.709917e-60 | -8.615850e-47 |
| Msa0176620 | Msa0295980 | 0.809610 | 1.738217e-50 | -8.615850e-47 |
| Msa0177550 | Msa0295980 | 0.807130 | 5.874653e-50 | -8.615850e-47 |
| Msa0190670 | Msa0295980 | 0.816727 | 4.762925e-52 | -8.615850e-47 |
| Msa0194230 | Msa0295980 | 0.807241 | 5.564306e-50 | -8.615850e-47 |
| Msa0212550 | Msa0295980 | 0.816896 | 4.365306e-52 | -8.615850e-47 |
| Msa0216760 | Msa0295980 | 0.934369 | 4.491924e-96 | -8.615850e-47 |
| Msa0223880 | Msa0295980 | 0.801489 | 8.791603e-49 | -8.615850e-47 |
| Msa0252930 | Msa0295980 | 0.817134 | 3.859617e-52 | -8.615850e-47 |
| Msa0264940 | Msa0295980 | 0.811183 | 7.953488e-51 | -8.615850e-47 |
| Msa0266640 | Msa0295980 | 0.800042 | 1.735216e-48 | -8.615850e-47 |
| Msa0274250 | Msa0295980 | 0.814734 | 1.324656e-51 | -8.615850e-47 |
| Msa0278950 | Msa0295980 | 0.826463 | 2.676458e-54 | -8.615850e-47 |
| Msa0295980 | Msa0302990 | 0.811099 | 8.294748e-51 | -8.615850e-47 |
| Msa0295980 | Msa0314440 | 0.812656 | 3.798542e-51 | -8.615850e-47 |
| Msa0295980 | Msa0319690 | 0.801214 | 1.000668e-48 | -8.615850e-47 |
| Msa0295980 | Msa0333940 | 0.903090 | 4.967734e-79 | -8.615850e-47 |
| Msa0295980 | Msa0334050 | 0.915342 | 6.599273e-85 | -8.615850e-47 |
| Msa0295980 | Msa0340650 | 0.800125 | 1.668998e-48 | -8.615850e-47 |
| Msa0295980 | Msa0343720 | 0.818875 | 1.560069e-52 | -8.615850e-47 |
| Msa0295980 | Msa0374130 | 0.821040 | 4.986898e-53 | -8.615850e-47 |
| Msa0295980 | Msa0469550 | 0.839197 | 1.830027e-57 | -8.615850e-47 |
| Msa0295980 | Msa0491770 | 0.815049 | 1.128262e-51 | -8.615850e-47 |
| Msa0295980 | Msa0515260 | 0.839675 | 1.374791e-57 | -8.615850e-47 |
| Msa0295980 | Msa0548760 | 0.828576 | 8.327779e-55 | -8.615850e-47 |
| Msa0295980 | Msa0548770 | 0.807433 | 5.066367e-50 | -8.615850e-47 |
| Msa0295980 | Msa0548970 | 0.826539 | 2.567138e-54 | -8.615850e-47 |
| Msa0295980 | Msa0584970 | 0.823077 | 1.681469e-53 | -8.615850e-47 |
| Msa0295980 | Msa0594330 | 0.804619 | 1.980652e-49 | -8.615850e-47 |
| Msa0295980 | Msa0600820 | -0.801882 | 7.300920e-49 | -8.615850e-47 |
| Msa0295980 | Msa0602050 | 0.813135 | 2.982844e-51 | -8.615850e-47 |
| Msa0295980 | Msa0605410 | 0.810015 | 1.421711e-50 | -8.615850e-47 |
| Msa0295980 | Msa0605460 | 0.802567 | 5.277754e-49 | -8.615850e-47 |
| Msa0295980 | Msa0605470 | 0.817732 | 2.830941e-52 | -8.615850e-47 |
| Msa0295980 | Msa0623980 | 0.807769 | 4.299172e-50 | -8.615850e-47 |
| Msa0295980 | Msa0643190 | 0.813662 | 2.285221e-51 | -8.615850e-47 |
| Msa0295980 | Msa0645060 | 0.823336 | 1.462948e-53 | -8.615850e-47 |
| Msa0295980 | Msa0645120 | 0.823486 | 1.349750e-53 | -8.615850e-47 |
| Msa0295980 | Msa0646210 | 0.801221 | 9.974215e-49 | -8.615850e-47 |
| Msa0295980 | Msa0668220 | 0.807106 | 5.943431e-50 | -8.615850e-47 |
| Msa0295980 | Msa0670360 | 0.816268 | 6.035653e-52 | -8.615850e-47 |
| Msa0295980 | Msa0671640 | 0.800638 | 1.312202e-48 | -8.615850e-47 |
| Msa0295980 | Msa0676190 | 0.825344 | 4.933110e-54 | -8.615850e-47 |
| Msa0295980 | Msa0676200 | 0.810542 | 1.094328e-50 | -8.615850e-47 |
| Msa0295980 | Msa0678620 | 0.810522 | 1.105652e-50 | -8.615850e-47 |
| Msa0295980 | Msa0684560 | 0.815438 | 9.243513e-52 | -8.615850e-47 |
| Msa0295980 | Msa0684590 | 0.813369 | 2.650588e-51 | -8.615850e-47 |
| Msa0295980 | Msa0684600 | 0.829942 | 3.881416e-55 | -8.615850e-47 |
| Msa0295980 | Msa0684720 | 0.839373 | 1.647658e-57 | -8.615850e-47 |
| Msa0295980 | Msa0727480 | 0.804419 | 2.179887e-49 | -8.615850e-47 |
| Msa0295980 | Msa0735140 | 0.805013 | 1.638319e-49 | -8.615850e-47 |
| Msa0295980 | Msa0735280 | 0.827450 | 1.554218e-54 | -8.615850e-47 |
| Msa0295980 | Msa0768670 | 0.809392 | 1.935840e-50 | -8.615850e-47 |
| Msa0295980 | Msa0768720 | 0.810426 | 1.159523e-50 | -8.615850e-47 |
| Msa0295980 | Msa0777070 | 0.843730 | 1.170722e-58 | -8.615850e-47 |
| Msa0295980 | Msa0777250 | 0.813458 | 2.533399e-51 | -8.615850e-47 |
| Msa0295980 | Msa0787860 | 0.808127 | 3.607979e-50 | -8.615850e-47 |
| Msa0295980 | Msa0814160 | 0.816494 | 5.373703e-52 | -8.615850e-47 |
| Msa0295980 | Msa0824860 | 0.800374 | 1.485331e-48 | -8.615850e-47 |
| Msa0295980 | Msa0834270 | 0.803427 | 3.504982e-49 | -8.615850e-47 |
| Msa0295980 | Msa0854840 | 0.852405 | 4.716557e-61 | -8.615850e-47 |
| Msa0295980 | Msa0863840 | 0.800666 | 1.294959e-48 | -8.615850e-47 |
| Msa0295980 | Msa0864160 | 0.812639 | 3.832309e-51 | -8.615850e-47 |
| Msa0295980 | Msa0883640 | 0.867073 | 1.790222e-65 | -8.615850e-47 |
| Msa0295980 | Msa0898060 | 0.818494 | 1.903537e-52 | -8.615850e-47 |
| Msa0295980 | Msa0902340 | 0.813955 | 1.969378e-51 | -8.615850e-47 |
| Msa0295980 | Msa0910250 | 0.800272 | 1.558053e-48 | -8.615850e-47 |
| Msa0295980 | Msa0910830 | 0.869697 | 2.549823e-66 | -8.615850e-47 |
| Msa0295980 | Msa0924490 | 0.823296 | 1.494689e-53 | -8.615850e-47 |
| Msa0295980 | Msa0933590 | 0.801619 | 8.266928e-49 | -8.615850e-47 |
| Msa0295980 | Msa0948050 | 0.806118 | 9.605556e-50 | -8.615850e-47 |
| Msa0295980 | Msa0960090 | 0.867814 | 1.036546e-65 | -8.615850e-47 |
| Msa0295980 | Msa0967820 | 0.834367 | 3.122464e-56 | -8.615850e-47 |
| Msa0295980 | Msa0985700 | 0.866519 | 2.686270e-65 | -8.615850e-47 |
| Msa0295980 | Msa0993450 | 0.815786 | 7.734415e-52 | -8.615850e-47 |
| Msa0295980 | Msa1006170 | 0.807271 | 5.483073e-50 | -8.615850e-47 |
| Msa0295980 | Msa1021620 | 0.809599 | 1.747052e-50 | -8.615850e-47 |
| Msa0295980 | Msa1024350 | 0.841574 | 4.374772e-58 | -8.615850e-47 |
| Msa0295980 | Msa1040730 | 0.805400 | 1.359685e-49 | -8.615850e-47 |
| Msa0295980 | Msa1041630 | 0.806834 | 6.784666e-50 | -8.615850e-47 |
| Msa0295980 | Msa1061670 | 0.829429 | 5.172150e-55 | -8.615850e-47 |
| Msa0295980 | Msa1064940 | 0.800125 | 1.668884e-48 | -8.615850e-47 |
| Msa0295980 | Msa1076830 | 0.814373 | 1.592445e-51 | -8.615850e-47 |
| Msa0295980 | Msa1081610 | 0.823602 | 1.268295e-53 | -8.615850e-47 |
| Msa0295980 | Msa1087370 | 0.818185 | 2.236923e-52 | -8.615850e-47 |
| Msa0295980 | Msa1087380 | 0.806692 | 7.270560e-50 | -8.615850e-47 |
| Msa0295980 | Msa1106960 | 0.817361 | 3.431425e-52 | -8.615850e-47 |
| Msa0295980 | Msa1109880 | 0.817503 | 3.188111e-52 | -8.615850e-47 |
| Msa0295980 | Msa1109890 | 0.839513 | 1.515144e-57 | -8.615850e-47 |
| Msa0295980 | Msa1166530 | 0.819721 | 1.000924e-52 | -8.615850e-47 |
| Msa0295980 | Msa1207480 | 0.812349 | 4.433573e-51 | -8.615850e-47 |
| Msa0295980 | Msa1211390 | -0.800678 | 1.287694e-48 | -8.615850e-47 |
| Msa0295980 | Msa1214960 | 0.804777 | 1.835307e-49 | -8.615850e-47 |
| Msa0295980 | Msa1216600 | 0.846757 | 1.776670e-59 | -8.615850e-47 |
| Msa0295980 | Msa1242060 | 0.809555 | 1.785669e-50 | -8.615850e-47 |
| Msa0295980 | Msa1262810 | 0.803784 | 2.954280e-49 | -8.615850e-47 |
| Msa0295980 | Msa1286420 | 0.820939 | 5.262707e-53 | -8.615850e-47 |
| Msa0295980 | Msa1296870 | 0.828726 | 7.660874e-55 | -8.615850e-47 |
| Msa0295980 | Msa1300610 | 0.816318 | 5.882146e-52 | -8.615850e-47 |
| Msa0295980 | Msa1306200 | -0.808016 | 3.810044e-50 | -8.615850e-47 |
| Msa0295980 | Msa1323030 | 0.855880 | 4.687433e-62 | -8.615850e-47 |
| Msa0295980 | Msa1323120 | 0.806578 | 7.683607e-50 | -8.615850e-47 |
| Msa0295980 | Msa1323160 | 0.844747 | 6.242888e-59 | -8.615850e-47 |
| Msa0295980 | Msa1329740 | 0.823386 | 1.424389e-53 | -8.615850e-47 |
| Msa0295980 | Msa1357490 | 0.849143 | 3.906173e-60 | -8.615850e-47 |
| Msa0295980 | Msa1357750 | 0.805085 | 1.582451e-49 | -8.615850e-47 |
| Msa0295980 | Msa1357860 | 0.836543 | 8.800333e-57 | -8.615850e-47 |
| Msa0295980 | Msa1371870 | 0.802674 | 5.015509e-49 | -8.615850e-47 |
| Msa0295980 | Msa1373560 | 0.811922 | 5.495115e-51 | -8.615850e-47 |
| Msa0295980 | Msa1376070 | 0.822211 | 2.674408e-53 | -8.615850e-47 |
| Msa0295980 | Msa1378400 | 0.816703 | 4.822974e-52 | -8.615850e-47 |
| Msa0295980 | Msa1380490 | 0.804747 | 1.862510e-49 | -8.615850e-47 |
| Msa0295980 | Msa1393440 | 0.800694 | 1.278259e-48 | -8.615850e-47 |
| Msa0295980 | Msa1395690 | 0.813062 | 3.095435e-51 | -8.615850e-47 |
| Msa0295980 | Msa1407670 | 0.842220 | 2.953121e-58 | -8.615850e-47 |
| Msa0295980 | Msa1411550 | 0.843424 | 1.413498e-58 | -8.615850e-47 |
| Msa0295980 | Msa1426420 | 0.856237 | 3.683735e-62 | -8.615850e-47 |
| Msa0295980 | Msa1445900 | 0.817484 | 3.220140e-52 | -8.615850e-47 |
| Msa0295980 | Msa1449770 | 0.839058 | 1.988485e-57 | -8.615850e-47 |
| Msa0295980 | Msa1459610 | 0.838629 | 2.567391e-57 | -8.615850e-47 |
| Msa0295980 | Msa1460310 | 0.811425 | 7.047184e-51 | -8.615850e-47 |
PPI
| Gene1 | Gene2 | Type |
|---|
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa0295980 | MtrunA17_Chr2g0318341 | 91.483 | 317 | 27 | 0 | 285 | 601 | 25 | 341 | 0.0 | 603 |
| Msa0295980 | MtrunA17_Chr2g0318341 | 87.834 | 337 | 8 | 2 | 1 | 304 | 1 | 337 | 0.0 | 603 |
| Msa0295980 | MtrunA17_Chr2g0318311 | 87.048 | 332 | 40 | 1 | 270 | 601 | 13 | 341 | 0.0 | 592 |
| Msa0295980 | MtrunA17_Chr2g0318311 | 84.570 | 337 | 19 | 2 | 1 | 304 | 1 | 337 | 0.0 | 581 |
| Msa0295980 | MtrunA17_Chr8g0360691 | 67.173 | 329 | 108 | 0 | 273 | 601 | 13 | 341 | 7.46e-162 | 466 |
| Msa0295980 | MtrunA17_Chr8g0360691 | 62.310 | 329 | 90 | 3 | 10 | 304 | 9 | 337 | 4.55e-138 | 405 |
| Msa0295980 | MtrunA17_Chr4g0029291 | 48.571 | 280 | 137 | 4 | 306 | 582 | 120 | 395 | 2.16e-88 | 279 |
| Msa0295980 | MtrunA17_Chr4g0029291 | 43.750 | 288 | 122 | 7 | 38 | 289 | 112 | 395 | 3.81e-71 | 234 |
| Msa0295980 | MtrunA17_Chr4g0029271 | 47.500 | 280 | 141 | 4 | 306 | 582 | 110 | 386 | 6.16e-88 | 278 |
| Msa0295980 | MtrunA17_Chr4g0029271 | 43.158 | 285 | 123 | 5 | 41 | 289 | 105 | 386 | 1.20e-72 | 238 |
| Msa0295980 | MtrunA17_Chr2g0287361 | 42.574 | 303 | 142 | 7 | 307 | 601 | 53 | 331 | 1.23e-76 | 246 |
| Msa0295980 | MtrunA17_Chr2g0287361 | 36.610 | 295 | 130 | 8 | 33 | 293 | 38 | 309 | 1.62e-54 | 188 |
| Msa0295980 | MtrunA17_Chr2g0292811 | 42.384 | 302 | 142 | 7 | 308 | 601 | 53 | 330 | 5.90e-75 | 242 |
| Msa0295980 | MtrunA17_Chr2g0292811 | 37.591 | 274 | 123 | 6 | 33 | 274 | 37 | 294 | 1.76e-53 | 185 |
| Msa0295980 | MtrunA17_Chr2g0292801 | 43.509 | 285 | 138 | 6 | 325 | 601 | 324 | 593 | 3.55e-72 | 243 |
| Msa0295980 | MtrunA17_Chr2g0292801 | 34.951 | 309 | 149 | 8 | 31 | 304 | 298 | 589 | 4.26e-51 | 185 |
| Msa0295980 | MtrunA17_Chr2g0292821 | 43.571 | 280 | 145 | 5 | 325 | 601 | 324 | 593 | 2.14e-71 | 241 |
| Msa0295980 | MtrunA17_Chr2g0292821 | 34.951 | 309 | 149 | 8 | 31 | 304 | 298 | 589 | 1.51e-50 | 184 |
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa0295980 | AT5G54370.1 | 64.883 | 299 | 100 | 2 | 306 | 601 | 41 | 337 | 3.76e-146 | 426 |
| Msa0295980 | AT5G54370.1 | 54.192 | 334 | 113 | 5 | 7 | 304 | 4 | 333 | 5.95e-123 | 367 |
| Msa0295980 | AT1G54890.1 | 60.927 | 302 | 113 | 3 | 305 | 601 | 46 | 347 | 1.35e-135 | 399 |
| Msa0295980 | AT1G54890.1 | 53.172 | 331 | 113 | 5 | 16 | 304 | 13 | 343 | 2.19e-118 | 355 |
| Msa0295980 | AT4G27400.1 | 56.289 | 318 | 132 | 3 | 289 | 601 | 26 | 341 | 2.84e-131 | 388 |
| Msa0295980 | AT4G27400.1 | 49.398 | 332 | 126 | 5 | 13 | 304 | 8 | 337 | 1.01e-106 | 325 |
| Msa0295980 | AT5G60520.1 | 52.075 | 265 | 123 | 3 | 306 | 567 | 64 | 327 | 2.97e-93 | 290 |
| Msa0295980 | AT5G60520.1 | 45.487 | 277 | 113 | 5 | 34 | 274 | 53 | 327 | 1.71e-75 | 244 |
| Msa0295980 | AT5G60530.1 | 49.817 | 273 | 132 | 3 | 306 | 574 | 164 | 435 | 3.09e-92 | 291 |
| Msa0295980 | AT5G60530.1 | 45.263 | 285 | 117 | 6 | 34 | 281 | 153 | 435 | 3.18e-78 | 254 |
| Msa0295980 | AT3G19430.2 | 40.594 | 303 | 159 | 6 | 303 | 601 | 297 | 582 | 6.63e-73 | 244 |
| Msa0295980 | AT3G19430.2 | 36.039 | 308 | 143 | 8 | 34 | 304 | 288 | 578 | 2.42e-53 | 192 |
| Msa0295980 | AT3G19430.1 | 40.594 | 303 | 159 | 6 | 303 | 601 | 274 | 559 | 6.75e-73 | 244 |
| Msa0295980 | AT3G19430.1 | 36.039 | 308 | 143 | 8 | 34 | 304 | 265 | 555 | 2.61e-53 | 191 |
Find 158 sgRNAs with CRISPR-Local
Find 334 sgRNAs with CRISPR-GE
CRISPR-Local
| sgRNA_sequence | on_target_score | Position | Region |
|---|---|---|---|
| AAGCCACACCATCATCAATT+TGG | 0.212135 | 2_3:-48821633 | Msa0295980:CDS |
| AGATAGCAAACTTTGTCTTT+TGG | 0.252280 | 2_3:+48822179 | None:intergenic |
| ACAGATATTTCAGCAACTTC+TGG | 0.256973 | 2_3:+48821466 | None:intergenic |
| ACAGATATTTCAGCAACTTC+TGG | 0.256973 | 2_3:+48824760 | None:intergenic |
| CATCAGGAATCTGATAATTA+TGG | 0.264771 | 2_3:+48821407 | None:intergenic |
| CATCAGGAATCTGATAATTA+TGG | 0.264771 | 2_3:+48824701 | None:intergenic |
| ATTGCCACGCCTGGCTTTGC+CGG | 0.284921 | 2_3:+48821283 | Msa0295970:CDS |
| GATCCGCGACCATTACAATT+TGG | 0.285841 | 2_3:+48821862 | None:intergenic |
| TCCAAGAACTCCTTCAACTT+TGG | 0.319801 | 2_3:+48821333 | None:intergenic |
| GATGTGCAGTTCAAATTCTA+TGG | 0.321248 | 2_3:-48821364 | Msa0295980:CDS |
| GATGTGCAGTTCAAATTCTA+TGG | 0.321248 | 2_3:-48824658 | Msa0295980:intron |
| CACGTGGAGAGGTGACCTTC+AGG | 0.323310 | 2_3:+48824850 | None:intergenic |
| CACGTAGAGAGGTGACCTTC+AGG | 0.324319 | 2_3:+48821556 | None:intergenic |
| ATAGCCACACCTGGCTTTGC+CGG | 0.333888 | 2_3:+48824577 | None:intergenic |
| TCCAAAGTTGAAGGAGTTCT+TGG | 0.337116 | 2_3:-48821334 | Msa0295980:CDS |
| TCCAAAGTTGAAGGAGTTCT+TGG | 0.337116 | 2_3:-48824628 | Msa0295980:intron |
| TAAAACGAGCATTGATTTGA+AGG | 0.368629 | 2_3:+48821743 | None:intergenic |
| TAAAACGAGCATTGATTTGA+AGG | 0.375773 | 2_3:+48825037 | None:intergenic |
| GGGTTAGCTGGTGATCTTGA+AGG | 0.383234 | 2_3:+48822200 | None:intergenic |
| CAGATATTTCAGCAACTTCT+GGG | 0.400574 | 2_3:+48821467 | None:intergenic |
| CAGATATTTCAGCAACTTCT+GGG | 0.400574 | 2_3:+48824761 | None:intergenic |
| AGCCACACCATCATCAATTT+GGG | 0.401698 | 2_3:-48821632 | Msa0295980:CDS |
| GAAGGCTTGGAGATTGAATA+TGG | 0.405534 | 2_3:-48821163 | Msa0295980:CDS |
| GATCTGCATGCTTGGACCCT+CGG | 0.418311 | 2_3:-48821843 | Msa0295980:CDS |
| GGCGTGGCAATGCCGGTCAT+TGG | 0.420807 | 2_3:-48821271 | Msa0295980:CDS |
| TATACTTGGATTCAAGCATT+GGG | 0.425530 | 2_3:-48821688 | Msa0295980:CDS |
| TATACTTGGATTCAAGCATT+GGG | 0.425530 | 2_3:-48824982 | Msa0295980:CDS |
| TGGCCGCGGATCTGCGTGCT+TGG | 0.430493 | 2_3:-48825145 | Msa0295980:CDS |
| CCTCGTTTCGTTGGTGCGGA+TGG | 0.440785 | 2_3:-48825120 | Msa0295980:CDS |
| TGAGAAAACAACGGCTCTTA+CGG | 0.441610 | 2_3:+48825692 | None:intergenic |
| GGGTTAGCTGGTGATCTTGA+AGG | 0.441826 | 2_3:+48825643 | None:intergenic |
| AACTATACCATTACCACTGC+TGG | 0.442336 | 2_3:+48821117 | Msa0295970:CDS |
| GAAGGCATGGATATTGAGTA+TGG | 0.445718 | 2_3:-48824457 | Msa0295980:CDS |
| ACGAGCATTGATTTGAAGGT+TGG | 0.446132 | 2_3:+48825041 | None:intergenic |
| CCTCGGTTCGTTGGTGCGGA+TGG | 0.452228 | 2_3:-48821826 | Msa0295980:CDS |
| AGATTCAGTGCAGGAAGGCT+TGG | 0.454274 | 2_3:-48821176 | Msa0295980:CDS |
| AAAGCCAGGCGTGGCAATGC+CGG | 0.457703 | 2_3:-48821278 | Msa0295980:CDS |
| TTGGTCTCCCTTGCGGCCTA+AGG | 0.460474 | 2_3:+48821716 | None:intergenic |
| TTGGTCTCCCTTGCGGCCTA+AGG | 0.460474 | 2_3:+48825010 | None:intergenic |
| GGAGACCAAGGGATTATACT+TGG | 0.461637 | 2_3:-48821702 | Msa0295980:CDS |
| GGAGACCAAGGGATTATACT+TGG | 0.461637 | 2_3:-48824996 | Msa0295980:CDS |
| ATGACCGGCATTGCCACGCC+TGG | 0.467891 | 2_3:+48821274 | Msa0295970:CDS |
| ATGGATTCTACTGTCCTCCT+TGG | 0.475359 | 2_3:+48821426 | None:intergenic |
| ATGGATTCTACTGTCCTCCT+TGG | 0.475359 | 2_3:+48824720 | None:intergenic |
| ATCTTGAAGGGCACTGAGTA+GGG | 0.476219 | 2_3:+48822213 | None:intergenic |
| GTGGCAATGCCGGTCATTGG+AGG | 0.478744 | 2_3:-48821268 | Msa0295980:CDS |
| TTATACTTGGATTCAAGCAT+TGG | 0.481860 | 2_3:-48821689 | Msa0295980:CDS |
| TTATACTTGGATTCAAGCAT+TGG | 0.481860 | 2_3:-48824983 | Msa0295980:CDS |
| TTGTCTTCCCCTCCAACTAC+TGG | 0.482550 | 2_3:+48824553 | None:intergenic |
| TGAGCAAAACAATCATCATC+AGG | 0.483129 | 2_3:+48821391 | None:intergenic |
| TGAGCAAAACAATCATCATC+AGG | 0.483129 | 2_3:+48824685 | None:intergenic |
| TTTCAAAATCCGGCAAAGCC+AGG | 0.488564 | 2_3:-48821292 | Msa0295980:CDS |
| GGTTAGCTGGTGATCTTGAA+GGG | 0.489453 | 2_3:+48822201 | None:intergenic |
| TGGTCGCGGATCTGCATGCT+TGG | 0.491252 | 2_3:-48821851 | Msa0295980:CDS |
| GGTCGTAAAGCAAATTGTAA+TGG | 0.494042 | 2_3:-48825165 | Msa0295980:CDS |
| CTACTGTCCTCCTTGGTGAC+AGG | 0.494181 | 2_3:+48821433 | None:intergenic |
| CTACTGTCCTCCTTGGTGAC+AGG | 0.494181 | 2_3:+48824727 | None:intergenic |
| TTTCAAAATCCGGCAAAGCC+AGG | 0.497033 | 2_3:-48824586 | Msa0295980:CDS |
| CCTCGGATTGCCACGTGGAG+AGG | 0.499460 | 2_3:+48824839 | None:intergenic |
| CGTCGGATTGCCACGTAGAG+AGG | 0.506458 | 2_3:+48821545 | None:intergenic |
| GGTGGTGCCAGCAGTGGTAA+TGG | 0.506919 | 2_3:-48821124 | Msa0295980:CDS |
| GGAGATTGAATATGGTATGA+TGG | 0.508182 | 2_3:-48821155 | Msa0295980:CDS |
| TGCTTGGACCCTCGGTTCGT+TGG | 0.509275 | 2_3:-48821835 | Msa0295980:CDS |
| GATCTTGAAGGACATTGAGC+AGG | 0.512583 | 2_3:+48825655 | None:intergenic |
| AATGCTCATTCCTCCTTCCA+TGG | 0.514259 | 2_3:+48825082 | None:intergenic |
| GGTGTGGCTATGCCAGTAGT+TGG | 0.516923 | 2_3:-48824565 | Msa0295980:CDS |
| GGATATTGAGTATGGTATGA+TGG | 0.518205 | 2_3:-48824449 | Msa0295980:CDS |
| TGGCAATGCCGGTCATTGGA+GGG | 0.520893 | 2_3:-48821267 | Msa0295980:CDS |
| AGATTCAGTGCAGGAAGGCA+TGG | 0.525207 | 2_3:-48824470 | Msa0295980:CDS |
| TGCTTGGACCCTCGTTTCGT+TGG | 0.528337 | 2_3:-48825129 | Msa0295980:CDS |
| GATCTTGAAGGGCACTGAGT+AGG | 0.531784 | 2_3:+48822212 | None:intergenic |
| ACGTGGAGAGGTGACCTTCA+GGG | 0.531866 | 2_3:+48824851 | None:intergenic |
| GGACCCTCGGTTCGTTGGTG+CGG | 0.532291 | 2_3:-48821830 | Msa0295980:CDS |
| TTGTCTTCCCCTCCAATGAC+CGG | 0.533192 | 2_3:+48821259 | Msa0295970:CDS |
| ATCTGAAGATGCAAGGGATG+TGG | 0.533450 | 2_3:+48824522 | None:intergenic |
| CAAGACAATCTGAAGAAACA+AGG | 0.537212 | 2_3:+48821221 | Msa0295970:CDS |
| ACGTAGAGAGGTGACCTTCA+GGG | 0.537243 | 2_3:+48821557 | None:intergenic |
| TTTATCGGCCTTAGGCCGCA+AGG | 0.538998 | 2_3:-48821724 | Msa0295980:CDS |
| TTTATCGGCCTTAGGCCGCA+AGG | 0.538998 | 2_3:-48825018 | Msa0295980:CDS |
| GGTTTATCGTCCAAAGTTGA+AGG | 0.540641 | 2_3:-48821343 | Msa0295980:CDS |
| TGAATCCAAGTATAATCCCT+TGG | 0.542313 | 2_3:+48821697 | None:intergenic |
| TGAATCCAAGTATAATCCCT+TGG | 0.542313 | 2_3:+48824991 | None:intergenic |
| CGTCATAAGAGAGCTTCAAA+TGG | 0.545184 | 2_3:+48821596 | None:intergenic |
| AGTGCTCATTCCTCCTTCCA+TGG | 0.545876 | 2_3:+48821788 | None:intergenic |
| ATCTGAAGAAACAAGGGATG+TGG | 0.547311 | 2_3:+48821228 | Msa0295970:CDS |
| TGCACGGGTGGTGCCAGCAG+TGG | 0.547740 | 2_3:-48821130 | Msa0295980:CDS |
| TTCTGCTAAAGATTCAGTGC+AGG | 0.549391 | 2_3:-48821185 | Msa0295980:CDS |
| TTCTGCTAAAGATTCAGTGC+AGG | 0.549391 | 2_3:-48824479 | Msa0295980:CDS |
| GGCAATGCCGGTCATTGGAG+GGG | 0.549475 | 2_3:-48821266 | Msa0295980:CDS |
| GGTCGTAAACCAAATTGTAA+TGG | 0.554034 | 2_3:-48821871 | Msa0295980:CDS |
| TCGTCATCCCAAATTGATGA+TGG | 0.560527 | 2_3:+48821625 | None:intergenic |
| GTGGCTATGCCAGTAGTTGG+AGG | 0.563541 | 2_3:-48824562 | Msa0295980:CDS |
| CAAGACAATCTGAAGATGCA+AGG | 0.565565 | 2_3:+48824515 | None:intergenic |
| GGTATGATGGATTGCACTGG+TGG | 0.568752 | 2_3:-48824436 | Msa0295980:CDS |
| AAAAGTTGTGTGAATCAAAG+AGG | 0.574407 | 2_3:+48821662 | None:intergenic |
| CATTTGAAGCTCTCTTATGA+CGG | 0.574479 | 2_3:-48821595 | Msa0295980:CDS |
| CATTTGAAGCTCTCTTATGA+CGG | 0.574479 | 2_3:-48824889 | Msa0295980:intron |
| TTAGGCCGCAAGGGAGACCA+AGG | 0.575605 | 2_3:-48821714 | Msa0295980:CDS |
| TTAGGCCGCAAGGGAGACCA+AGG | 0.575605 | 2_3:-48825008 | Msa0295980:CDS |
| GAAGCTCTCTTATGACGGAA+AGG | 0.577165 | 2_3:-48821590 | Msa0295980:CDS |
| GAAGCTCTCTTATGACGGAA+AGG | 0.577165 | 2_3:-48824884 | Msa0295980:intron |
| GGCTATGCCAGTAGTTGGAG+GGG | 0.579023 | 2_3:-48824560 | Msa0295980:CDS |
| TGGCTATGCCAGTAGTTGGA+GGG | 0.587831 | 2_3:-48824561 | Msa0295980:CDS |
| GAGGAATGAGCATTTCAGCT+TGG | 0.589342 | 2_3:-48825073 | Msa0295980:CDS |
| ATCGAATGAGAACGGTGTCA+TGG | 0.591031 | 2_3:-48821497 | Msa0295980:CDS |
| ATCGAATGAGAACGGTGTCA+TGG | 0.591031 | 2_3:-48824791 | Msa0295980:CDS |
| AAACCAAATTGTAATGGTCG+CGG | 0.592477 | 2_3:-48821865 | Msa0295980:CDS |
| CAAGATCACCAGCTAACCCA+AGG | 0.593988 | 2_3:-48825639 | Msa0295980:CDS |
| GAGGAATGAGCACTTCAGCT+TGG | 0.594491 | 2_3:-48821779 | Msa0295980:CDS |
| TAATCCCTTGGTCTCCCTTG+CGG | 0.596610 | 2_3:+48821709 | None:intergenic |
| TAATCCCTTGGTCTCCCTTG+CGG | 0.596610 | 2_3:+48825003 | None:intergenic |
| AAAACAACGGCTCTTACGGT+TGG | 0.597533 | 2_3:+48825696 | None:intergenic |
| ACTACTGGCATAGCCACACC+TGG | 0.600637 | 2_3:+48824568 | None:intergenic |
| GGTGGTGCTAGCAGTGGCAA+TGG | 0.602514 | 2_3:-48824418 | Msa0295980:CDS |
| GAAGGACATTGAGCAGGGCA+AGG | 0.603155 | 2_3:+48825661 | None:intergenic |
| AAGACAATCTGAAGATGCAA+GGG | 0.603290 | 2_3:+48824516 | None:intergenic |
| AAAGCAAATTGTAATGGCCG+CGG | 0.604200 | 2_3:-48825159 | Msa0295980:CDS |
| TTATCGGCCTTAGGCCGCAA+GGG | 0.605783 | 2_3:-48821723 | Msa0295980:CDS |
| TTATCGGCCTTAGGCCGCAA+GGG | 0.605783 | 2_3:-48825017 | Msa0295980:CDS |
| CCTCTCCACGTGGCAATCCG+AGG | 0.606272 | 2_3:-48824839 | Msa0295980:CDS |
| GGTCCAAGCACGCAGATCCG+CGG | 0.606584 | 2_3:+48825142 | None:intergenic |
| GCTAAAGATTCAGTGCAGGA+AGG | 0.607245 | 2_3:-48821181 | Msa0295980:CDS |
| GGACCCTCGTTTCGTTGGTG+CGG | 0.615729 | 2_3:-48825124 | Msa0295980:CDS |
| CCATCCGCACCAACGAAACG+AGG | 0.619171 | 2_3:+48825120 | None:intergenic |
| ATCTTGAAGGACATTGAGCA+GGG | 0.621400 | 2_3:+48825656 | None:intergenic |
| CAATGTGGTGCCTGTCACCA+AGG | 0.622527 | 2_3:-48821443 | Msa0295980:CDS |
| CAATGTGGTGCCTGTCACCA+AGG | 0.622527 | 2_3:-48824737 | Msa0295980:CDS |
| GGTATGATGGATTGCACGGG+TGG | 0.622663 | 2_3:-48821142 | Msa0295980:CDS |
| ATACTTGGATTCAAGCATTG+GGG | 0.623520 | 2_3:-48821687 | Msa0295980:CDS |
| ATACTTGGATTCAAGCATTG+GGG | 0.623520 | 2_3:-48824981 | Msa0295980:CDS |
| TGCACTGGTGGTGCTAGCAG+TGG | 0.625033 | 2_3:-48824424 | Msa0295980:CDS |
| CATCCGCACCAACGAACCGA+GGG | 0.629982 | 2_3:+48821827 | None:intergenic |
| AAGGATCTCGTAATCCCTGA+AGG | 0.634498 | 2_3:-48821571 | Msa0295980:CDS |
| AAGGATCTCGTAATCCCTGA+AGG | 0.634498 | 2_3:-48824865 | Msa0295980:CDS |
| CCATCCGCACCAACGAACCG+AGG | 0.635702 | 2_3:+48821826 | None:intergenic |
| ATCCCAAATTGATGATGGTG+TGG | 0.638854 | 2_3:+48821630 | None:intergenic |
| AAGACAATCTGAAGAAACAA+GGG | 0.640149 | 2_3:+48821222 | Msa0295970:CDS |
| GCTAAAGATTCAGTGCAGGA+AGG | 0.646657 | 2_3:-48824475 | Msa0295980:CDS |
| AAATCCGGCAAAGCCAGGCG+TGG | 0.649193 | 2_3:-48821287 | Msa0295980:CDS |
| GAGAGAACATCGAATGAGAA+CGG | 0.650582 | 2_3:-48821505 | Msa0295980:CDS |
| GAGAGAACATCGAATGAGAA+CGG | 0.650582 | 2_3:-48824799 | Msa0295980:CDS |
| TATGGTATGATGGATTGCAC+TGG | 0.652916 | 2_3:-48824439 | Msa0295980:CDS |
| AAATCCGGCAAAGCCAGGTG+TGG | 0.653931 | 2_3:-48824581 | Msa0295980:CDS |
| TACTTGGATTCAAGCATTGG+GGG | 0.654990 | 2_3:-48821686 | Msa0295980:CDS |
| TACTTGGATTCAAGCATTGG+GGG | 0.654990 | 2_3:-48824980 | Msa0295980:intron |
| ATATGGTATGATGGATTGCA+CGG | 0.657387 | 2_3:-48821146 | Msa0295980:CDS |
| CTGAAGGTCACCTCTCTACG+TGG | 0.671125 | 2_3:-48821555 | Msa0295980:CDS |
| GTAGTTTCTTGAGAAAACAA+CGG | 0.671848 | 2_3:+48825683 | None:intergenic |
| CTGAAGGTCACCTCTCCACG+TGG | 0.671875 | 2_3:-48824849 | Msa0295980:CDS |
| AAGATCACCAGCTAACCCAA+GGG | 0.673008 | 2_3:-48825638 | Msa0295980:CDS |
| CATCCGCACCAACGAAACGA+GGG | 0.683977 | 2_3:+48825121 | None:intergenic |
| TATGGTATGATGGATTGCAC+GGG | 0.687913 | 2_3:-48821145 | Msa0295980:CDS |
| TAGGCCGCAAGGGAGACCAA+GGG | 0.706685 | 2_3:-48821713 | Msa0295980:CDS |
| TAGGCCGCAAGGGAGACCAA+GGG | 0.706685 | 2_3:-48825007 | Msa0295980:CDS |
| TGCTGAAATATCTGTCAATG+TGG | 0.712131 | 2_3:-48821458 | Msa0295980:CDS |
| TGCTGAAATATCTGTCAATG+TGG | 0.712131 | 2_3:-48824752 | Msa0295980:CDS |
| TGTGGTGCCTGTCACCAAGG+AGG | 0.732407 | 2_3:-48821440 | Msa0295980:CDS |
| TGTGGTGCCTGTCACCAAGG+AGG | 0.732407 | 2_3:-48824734 | Msa0295980:CDS |
CRISPR-GE
| badsite warning | sgRNA_sequence | Strand | Position | Region | GC_content |
|---|---|---|---|---|---|
| !! | TTCTTGTGATAAATTTAATA+AGG | - | chr2_3:48821403-48821422 | Msa0295980:CDS | 15.0% |
| !!! | TTTTATACATAGTACATAAT+AGG | - | chr2_3:48823399-48823418 | Msa0295980:intron | 15.0% |
| !!! | TTTTTCGTATTTTATGATAA+TGG | - | chr2_3:48824840-48824859 | Msa0295980:CDS | 15.0% |
| !! | GTGATAAATTTAATAAGGTT+TGG | - | chr2_3:48821408-48821427 | Msa0295980:CDS | 20.0% |
| !! | AACAAGTGATCATTATATAT+TGG | - | chr2_3:48821662-48821681 | Msa0295980:CDS | 20.0% |
| !! | AACAAGTGTTCATTATATAT+TGG | - | chr2_3:48821707-48821726 | Msa0295980:CDS | 20.0% |
| !! | ATTATATATTGGATGTGAAT+AGG | - | chr2_3:48821673-48821692 | Msa0295980:CDS | 20.0% |
| !! | TAATACAATTCTTACTCAAA+AGG | + | chr2_3:48822641-48822660 | None:intergenic | 20.0% |
| !! | AAATTGGATGTTTATTCATT+CGG | + | chr2_3:48823060-48823079 | None:intergenic | 20.0% |
| !! | TGCATGTAAAAATAAGATAA+AGG | - | chr2_3:48823323-48823342 | Msa0295980:intron | 20.0% |
| !! | GATTATTTATGTTCAATACT+TGG | - | chr2_3:48824790-48824809 | Msa0295980:CDS | 20.0% |
| !! | AACAAGTGTTAATTATATAG+TGG | - | chr2_3:48824999-48825018 | Msa0295980:CDS | 20.0% |
| !! | GAAATAATCCTATTTGAGAT+CGG | + | chr2_3:48821564-48821583 | None:intergenic | 25.0% |
| !! | TAGTTTGCAGAAGATAAATT+TGG | - | chr2_3:48822511-48822530 | Msa0295980:intron | 25.0% |
| !! | ACGTAATTATAAGAAAGCAT+TGG | + | chr2_3:48822543-48822562 | None:intergenic | 25.0% |
| ! | AACTCAGAAAAAAATGTTTG+TGG | - | chr2_3:48822574-48822593 | Msa0295980:intron | 25.0% |
| ! | ACTCAGAAAAAAATGTTTGT+GGG | - | chr2_3:48822575-48822594 | Msa0295980:intron | 25.0% |
| !! | ATGGTTACAAAACAACATTT+TGG | + | chr2_3:48822614-48822633 | None:intergenic | 25.0% |
| ! | TTCTTACTCAAAAGGAAATA+TGG | + | chr2_3:48822633-48822652 | None:intergenic | 25.0% |
| ! | AGTTAATACGCTTATTCAAA+AGG | + | chr2_3:48822697-48822716 | None:intergenic | 25.0% |
| ! | TTTGAATAAGCGTATTAACT+TGG | - | chr2_3:48822697-48822716 | Msa0295980:intron | 25.0% |
| ! | CAATCACAATAGAAAAACAA+TGG | + | chr2_3:48822728-48822747 | None:intergenic | 25.0% |
| ! | TAACTCAAAGAAACATGTTA+TGG | - | chr2_3:48822755-48822774 | Msa0295980:intron | 25.0% |
| ! | AACTCAAAGAAACATGTTAT+GGG | - | chr2_3:48822756-48822775 | Msa0295980:intron | 25.0% |
| ! | TTCATTTGCATATAATCACT+AGG | + | chr2_3:48822824-48822843 | None:intergenic | 25.0% |
| ! | CAACAATAGATTTCAATACA+AGG | + | chr2_3:48822882-48822901 | None:intergenic | 25.0% |
| !!! | TGTTGCATTCTAAAGTATTA+TGG | - | chr2_3:48823090-48823109 | Msa0295980:intron | 25.0% |
| ! | ATAGATAAAATAGCGAGAAT+AGG | - | chr2_3:48823352-48823371 | Msa0295980:intron | 25.0% |
| ! | TCAATTAACTCTAAATTGGA+AGG | + | chr2_3:48823848-48823867 | None:intergenic | 25.0% |
| ! | ATTAGAAGGGAAAAATACTA+AGG | - | chr2_3:48823947-48823966 | Msa0295980:intron | 25.0% |
| !! | AAAATTCAAAACGCAGATTT+TGG | - | chr2_3:48824041-48824060 | Msa0295980:intron | 25.0% |
| ! | GGTATATGATAAGTTATGTA+GGG | + | chr2_3:48824173-48824192 | None:intergenic | 25.0% |
| ! | GTGCAGTTATATAAAAGATT+GGG | + | chr2_3:48824194-48824213 | None:intergenic | 25.0% |
| ! | TGTGCAGTTATATAAAAGAT+TGG | + | chr2_3:48824195-48824214 | None:intergenic | 25.0% |
| !! | TTGAGTTTTCTATAAGCAAA+AGG | - | chr2_3:48824462-48824481 | Msa0295980:CDS | 25.0% |
| ! | AAGCAAAAGGATAGTATATA+AGG | - | chr2_3:48824475-48824494 | Msa0295980:CDS | 25.0% |
| GTAGTTTCTTGAGAAAACAA+CGG | + | chr2_3:48821224-48821243 | Msa0295970:CDS | 30.0% | |
| !! | GATAACAAACTTTTTCCCTT+GGG | + | chr2_3:48821284-48821303 | Msa0295970:CDS | 30.0% |
| !! | AGATAACAAACTTTTTCCCT+TGG | + | chr2_3:48821285-48821304 | Msa0295970:CDS | 30.0% |
| ! | TTGTTTTCTATTTCCATGGA+AGG | - | chr2_3:48821809-48821828 | Msa0295980:CDS | 30.0% |
| !! | TAAAACGAGCATTGATTTGA+AGG | + | chr2_3:48821870-48821889 | None:intergenic | 30.0% |
| ! | CAAATCAATGCTCGTTTTAT+CGG | - | chr2_3:48821871-48821890 | Msa0295980:CDS | 30.0% |
| TTATACTTGGATTCAAGCAT+TGG | - | chr2_3:48821921-48821940 | Msa0295980:intron | 30.0% | |
| TATACTTGGATTCAAGCATT+GGG | - | chr2_3:48821922-48821941 | Msa0295980:intron | 30.0% | |
| AAAAGTTGTGTGAATCAAAG+AGG | + | chr2_3:48821951-48821970 | None:intergenic | 30.0% | |
| CATCAGGAATCTGATAATTA+TGG | + | chr2_3:48822206-48822225 | None:intergenic | 30.0% | |
| !! | TGATGATTGTTTTGCTCATT+TGG | - | chr2_3:48822224-48822243 | Msa0295980:CDS | 30.0% |
| CGCTTATTCAAAAGGAAATA+TGG | + | chr2_3:48822689-48822708 | None:intergenic | 30.0% | |
| ACAATCAGATATCCATAGTT+CGG | - | chr2_3:48823757-48823776 | Msa0295980:intron | 30.0% | |
| TTAACTCTAAATTGGAAGGT+AGG | + | chr2_3:48823844-48823863 | None:intergenic | 30.0% | |
| CCACTCAATTAACTCTAAAT+TGG | + | chr2_3:48823852-48823871 | None:intergenic | 30.0% | |
| ! | CCAATTTAGAGTTAATTGAG+TGG | - | chr2_3:48823849-48823868 | Msa0295980:intron | 30.0% |
| ACAAATCACTCAAGATTAGA+AGG | - | chr2_3:48823933-48823952 | Msa0295980:intron | 30.0% | |
| CAAATCACTCAAGATTAGAA+GGG | - | chr2_3:48823934-48823953 | Msa0295980:intron | 30.0% | |
| !!! | TCACTAGTAAGTTTTAGAAG+AGG | + | chr2_3:48823995-48824014 | None:intergenic | 30.0% |
| !! | GTTTTGAATTTTGTGTCACT+TGG | + | chr2_3:48824033-48824052 | None:intergenic | 30.0% |
| GGGTATATGATAAGTTATGT+AGG | + | chr2_3:48824174-48824193 | None:intergenic | 30.0% | |
| ! | GATAATGAAAGTTGACTTAG+TGG | + | chr2_3:48824335-48824354 | None:intergenic | 30.0% |
| TGAATTGCTGGAATTATTTG+TGG | + | chr2_3:48824397-48824416 | None:intergenic | 30.0% | |
| CTTATAGAAAACTCAACAAG+TGG | + | chr2_3:48824458-48824477 | None:intergenic | 30.0% | |
| AAAGGATAGTATATAAGGTG+AGG | - | chr2_3:48824480-48824499 | Msa0295980:CDS | 30.0% | |
| CAAACAAGAGAAAATCATCA+TGG | - | chr2_3:48824529-48824548 | Msa0295980:CDS | 30.0% | |
| TCAGTTTCTTGAGAAAACAA+CGG | + | chr2_3:48824667-48824686 | None:intergenic | 30.0% | |
| ! | GATAGCAAACTTTGTCTTTT+GGG | + | chr2_3:48824727-48824746 | None:intergenic | 30.0% |
| ! | AGATAGCAAACTTTGTCTTT+TGG | + | chr2_3:48824728-48824747 | None:intergenic | 30.0% |
| !! | TAAAACGAGCATTGATTTGA+AGG | + | chr2_3:48821870-48821889 | None:intergenic | 30.0% |
| ! | CAAATCAATGCTCGTTTTAT+CGG | - | chr2_3:48821871-48821890 | Msa0295980:CDS | 30.0% |
| TTATACTTGGATTCAAGCAT+TGG | - | chr2_3:48821921-48821940 | Msa0295980:intron | 30.0% | |
| TATACTTGGATTCAAGCATT+GGG | - | chr2_3:48821922-48821941 | Msa0295980:intron | 30.0% | |
| AAAAGTTGTGTGAATCAAAG+AGG | + | chr2_3:48821951-48821970 | None:intergenic | 30.0% | |
| CATCAGGAATCTGATAATTA+TGG | + | chr2_3:48822206-48822225 | None:intergenic | 30.0% | |
| !! | TGATGATTGTTTTGCTCATT+TGG | - | chr2_3:48822224-48822243 | Msa0295980:CDS | 30.0% |
| AAGACAATCTGAAGAAACAA+GGG | + | chr2_3:48825685-48825704 | None:intergenic | 30.0% | |
| AAAACTAACATGCTCTCACT+AGG | + | chr2_3:48821434-48821453 | None:intergenic | 35.0% | |
| !!! | GCATGTTAGTTTTGCAAATG+TGG | - | chr2_3:48821441-48821460 | Msa0295980:CDS | 35.0% |
| ATGTTCTACCGATCTCAAAT+AGG | - | chr2_3:48821553-48821572 | Msa0295980:CDS | 35.0% | |
| GGTCGTAAAGCAAATTGTAA+TGG | - | chr2_3:48821739-48821758 | Msa0295980:CDS | 35.0% | |
| ! | GGCATTGTTTTCTATTTCCA+TGG | - | chr2_3:48821805-48821824 | Msa0295980:CDS | 35.0% |
| ! | TTTTCTATTTCCATGGAAGG+AGG | - | chr2_3:48821812-48821831 | Msa0295980:CDS | 35.0% |
| TGAATCCAAGTATAATCCCT+TGG | + | chr2_3:48821916-48821935 | None:intergenic | 35.0% | |
| ! | ATACTTGGATTCAAGCATTG+GGG | - | chr2_3:48821923-48821942 | Msa0295980:intron | 35.0% |
| TCATCATCCCAAATTGATGA+TGG | + | chr2_3:48821988-48822007 | None:intergenic | 35.0% | |
| ! | CATTTGAAGCTCTCTTATGA+CGG | - | chr2_3:48822015-48822034 | Msa0295980:intron | 35.0% |
| !!! | GACTCTAAGTTGATTTTCCT+CGG | + | chr2_3:48822085-48822104 | None:intergenic | 35.0% |
| CAGATATTTCAGCAACTTCT+GGG | + | chr2_3:48822146-48822165 | None:intergenic | 35.0% | |
| ACAGATATTTCAGCAACTTC+TGG | + | chr2_3:48822147-48822166 | None:intergenic | 35.0% | |
| TGCTGAAATATCTGTCAATG+TGG | - | chr2_3:48822152-48822171 | Msa0295980:CDS | 35.0% | |
| TGAGCAAAACAATCATCATC+AGG | + | chr2_3:48822222-48822241 | None:intergenic | 35.0% | |
| GATGTGCAGTTCAAATTCTA+TGG | - | chr2_3:48822246-48822265 | Msa0295980:intron | 35.0% | |
| ! | TCAGCCAGATTTTCAAAATC+CGG | - | chr2_3:48822308-48822327 | Msa0295980:intron | 35.0% |
| !! | TTTGCCGGATTTTGAAAATC+TGG | + | chr2_3:48822315-48822334 | None:intergenic | 35.0% |
| AAGACAATCTGAAGATGCAA+GGG | + | chr2_3:48822391-48822410 | None:intergenic | 35.0% | |
| GGATATTGAGTATGGTATGA+TGG | - | chr2_3:48822455-48822474 | Msa0295980:intron | 35.0% | |
| AACATGTTATGGGATGTACT+CGG | - | chr2_3:48822766-48822785 | Msa0295980:intron | 35.0% | |
| TATTGATACAAGCACAAGCA+TGG | - | chr2_3:48822906-48822925 | Msa0295980:intron | 35.0% | |
| ATTGATACAAGCACAAGCAT+GGG | - | chr2_3:48822907-48822926 | Msa0295980:intron | 35.0% | |
| TTATGGAAAGTTGCACACTA+TGG | + | chr2_3:48823586-48823605 | None:intergenic | 35.0% | |
| TATAACGTCACTAACCACAA+GGG | + | chr2_3:48823631-48823650 | None:intergenic | 35.0% | |
| TTATAACGTCACTAACCACA+AGG | + | chr2_3:48823632-48823651 | None:intergenic | 35.0% | |
| TGGTTAGTGACGTTATAAAC+AGG | - | chr2_3:48823634-48823653 | Msa0295980:intron | 35.0% | |
| AAGTCAAAGCTTAGTAGAAC+TGG | + | chr2_3:48823685-48823704 | None:intergenic | 35.0% | |
| AGCTATAGATCAATGTCAAG+TGG | + | chr2_3:48823896-48823915 | None:intergenic | 35.0% | |
| !!! | GTAAGTTTTAGAAGAGGCTA+AGG | + | chr2_3:48823989-48824008 | None:intergenic | 35.0% |
| TGACTTTCAACCATGAAATG+TGG | + | chr2_3:48824276-48824295 | None:intergenic | 35.0% | |
| ! | GTTGACTTAGTGGTTTAGAA+TGG | + | chr2_3:48824325-48824344 | None:intergenic | 35.0% |
| !! | TTATGATAATGGTCGCAGTA+AGG | - | chr2_3:48824851-48824870 | Msa0295980:CDS | 35.0% |
| !! | TATGATAATGGTCGCAGTAA+GGG | - | chr2_3:48824852-48824871 | Msa0295980:CDS | 35.0% |
| CTTTGTGATCCTTGATATTG+CGG | - | chr2_3:48824884-48824903 | Msa0295980:intron | 35.0% | |
| AAAACAATGTGATCGCAATC+GGG | + | chr2_3:48824940-48824959 | None:intergenic | 35.0% | |
| CAAAACAATGTGATCGCAAT+CGG | + | chr2_3:48824941-48824960 | None:intergenic | 35.0% | |
| !! | TATATAGTGGATATGAGAGC+AGG | - | chr2_3:48825012-48825031 | Msa0295980:CDS | 35.0% |
| GGTCGTAAACCAAATTGTAA+TGG | - | chr2_3:48825033-48825052 | Msa0295980:CDS | 35.0% | |
| AAACCAAATTGTAATGGTCG+CGG | - | chr2_3:48825039-48825058 | Msa0295980:CDS | 35.0% | |
| ! | TTGTTTTCTACTTCCATGGA+AGG | - | chr2_3:48825103-48825122 | Msa0295980:CDS | 35.0% |
| TGAATCCAAGTATAATCCCT+TGG | + | chr2_3:48821916-48821935 | None:intergenic | 35.0% | |
| ! | ATACTTGGATTCAAGCATTG+GGG | - | chr2_3:48821923-48821942 | Msa0295980:intron | 35.0% |
| ! | CATTTGAAGCTCTCTTATGA+CGG | - | chr2_3:48822015-48822034 | Msa0295980:intron | 35.0% |
| !!! | GACTCTAAGTTGATTTTCGT+CGG | + | chr2_3:48825379-48825398 | None:intergenic | 35.0% |
| CAGATATTTCAGCAACTTCT+GGG | + | chr2_3:48822146-48822165 | None:intergenic | 35.0% | |
| ACAGATATTTCAGCAACTTC+TGG | + | chr2_3:48822147-48822166 | None:intergenic | 35.0% | |
| TGCTGAAATATCTGTCAATG+TGG | - | chr2_3:48822152-48822171 | Msa0295980:CDS | 35.0% | |
| TGAGCAAAACAATCATCATC+AGG | + | chr2_3:48822222-48822241 | None:intergenic | 35.0% | |
| GATGTGCAGTTCAAATTCTA+TGG | - | chr2_3:48822246-48822265 | Msa0295980:intron | 35.0% | |
| ! | TCAGCCAGATTTTCAAAATC+CGG | - | chr2_3:48822308-48822327 | Msa0295980:intron | 35.0% |
| !! | TTTGCCGGATTTTGAAAATC+TGG | + | chr2_3:48822315-48822334 | None:intergenic | 35.0% |
| CAAGACAATCTGAAGAAACA+AGG | + | chr2_3:48825686-48825705 | None:intergenic | 35.0% | |
| GGAGATTGAATATGGTATGA+TGG | - | chr2_3:48825749-48825768 | Msa0295980:CDS | 35.0% | |
| !! | ATATGGTATGATGGATTGCA+CGG | - | chr2_3:48825758-48825777 | Msa0295980:CDS | 35.0% |
| TGAGAAAACAACGGCTCTTA+CGG | + | chr2_3:48821215-48821234 | Msa0295970:CDS | 40.0% | |
| ATCTTGAAGGACATTGAGCA+GGG | + | chr2_3:48821251-48821270 | Msa0295970:CDS | 40.0% | |
| ! | TTGCACTGAGTTTTGCACAT+AGG | + | chr2_3:48821321-48821340 | None:intergenic | 40.0% |
| AAATCAAACGAGAGACCTCT+CGG | + | chr2_3:48821492-48821511 | None:intergenic | 40.0% | |
| AAAGCAAATTGTAATGGCCG+CGG | - | chr2_3:48821745-48821764 | Msa0295980:CDS | 40.0% | |
| !! | ACGAGCATTGATTTGAAGGT+TGG | + | chr2_3:48821866-48821885 | None:intergenic | 40.0% |
| !! | TACTTGGATTCAAGCATTGG+GGG | - | chr2_3:48821924-48821943 | Msa0295980:intron | 40.0% |
| AAGCCACACCATCATCAATT+TGG | - | chr2_3:48821977-48821996 | Msa0295980:intron | 40.0% | |
| AGCCACACCATCATCAATTT+GGG | - | chr2_3:48821978-48821997 | Msa0295980:intron | 40.0% | |
| !! | ATCCCAAATTGATGATGGTG+TGG | + | chr2_3:48821983-48822002 | None:intergenic | 40.0% |
| CGTCATAAGAGAGCTTCAAA+TGG | + | chr2_3:48822017-48822036 | None:intergenic | 40.0% | |
| GAGAGAACATCGAATGAGAA+CGG | - | chr2_3:48822105-48822124 | Msa0295980:intron | 40.0% | |
| GGTTTATCGTCCAAAGTTGA+AGG | - | chr2_3:48822267-48822286 | Msa0295980:intron | 40.0% | |
| TCCAAAGTTGAAGGAGTTCT+TGG | - | chr2_3:48822276-48822295 | Msa0295980:intron | 40.0% | |
| TCCAAGAACTCCTTCAACTT+TGG | + | chr2_3:48822280-48822299 | None:intergenic | 40.0% | |
| CAAGACAATCTGAAGATGCA+AGG | + | chr2_3:48822392-48822411 | None:intergenic | 40.0% | |
| TTCTGCTAAAGATTCAGTGC+AGG | - | chr2_3:48822425-48822444 | Msa0295980:intron | 40.0% | |
| ! | GAAGGCATGGATATTGAGTA+TGG | - | chr2_3:48822447-48822466 | Msa0295980:intron | 40.0% |
| !! | TATGGTATGATGGATTGCAC+TGG | - | chr2_3:48822465-48822484 | Msa0295980:intron | 40.0% |
| ! | TGTTTGTGGGTTGTACTAAG+TGG | - | chr2_3:48822588-48822607 | Msa0295980:intron | 40.0% |
| AGAGCAAGGTTGTACTCATT+CGG | + | chr2_3:48822980-48822999 | None:intergenic | 40.0% | |
| GCAACAACTCACTGAGAAAT+TGG | + | chr2_3:48823076-48823095 | None:intergenic | 40.0% | |
| CTGCACTCAATCAGATTCAT+GGG | + | chr2_3:48823152-48823171 | None:intergenic | 40.0% | |
| GAGGCTAAAATCAGCAACTT+TGG | - | chr2_3:48823185-48823204 | Msa0295980:intron | 40.0% | |
| TTTGGCAACAAAGTTAGCTG+AGG | - | chr2_3:48823203-48823222 | Msa0295980:intron | 40.0% | |
| AACTGAACTTAACGCTCTAC+GGG | + | chr2_3:48823279-48823298 | None:intergenic | 40.0% | |
| CAACTGAACTTAACGCTCTA+CGG | + | chr2_3:48823280-48823299 | None:intergenic | 40.0% | |
| ! | GTAAGCCATGTCATTTCAGT+CGG | + | chr2_3:48823449-48823468 | None:intergenic | 40.0% |
| TTACAATGTCTAGTCCCGTT+CGG | - | chr2_3:48823465-48823484 | Msa0295980:intron | 40.0% | |
| CACACTATGGACCTTATCAA+CGG | + | chr2_3:48823573-48823592 | None:intergenic | 40.0% | |
| ! | GAGTACGGACACATGTTTTA+TGG | + | chr2_3:48823603-48823622 | None:intergenic | 40.0% |
| ATAACGTCACTAACCACAAG+GGG | + | chr2_3:48823630-48823649 | None:intergenic | 40.0% | |
| ATTGGAAGGTAGGTGATTAG+AGG | + | chr2_3:48823834-48823853 | None:intergenic | 40.0% | |
| TTACCGAAAGCCACATTTCA+TGG | - | chr2_3:48824263-48824282 | Msa0295980:intron | 40.0% | |
| CAACCATGAAATGTGGCTTT+CGG | + | chr2_3:48824269-48824288 | None:intergenic | 40.0% | |
| TGAGAAAACAACGGCTCTTA+CGG | + | chr2_3:48821215-48821234 | Msa0295970:CDS | 40.0% | |
| !!! | ACTTTGTCTTTTGGGTTAGC+TGG | + | chr2_3:48824719-48824738 | None:intergenic | 40.0% |
| TCATGGTCAAATGTGACTGA+TGG | - | chr2_3:48824911-48824930 | Msa0295980:intron | 40.0% | |
| AAACAATGTGATCGCAATCG+GGG | + | chr2_3:48824939-48824958 | None:intergenic | 40.0% | |
| ! | GGCATTGTTTTCTACTTCCA+TGG | - | chr2_3:48825099-48825118 | Msa0295980:CDS | 40.0% |
| ! | TTTTCTACTTCCATGGAAGG+AGG | - | chr2_3:48825106-48825125 | Msa0295980:CDS | 40.0% |
| !! | TACTTGGATTCAAGCATTGG+GGG | - | chr2_3:48821924-48821943 | Msa0295980:intron | 40.0% |
| AAGCCACACCATCATCAATT+TGG | - | chr2_3:48821977-48821996 | Msa0295980:intron | 40.0% | |
| AGCCACACCATCATCAATTT+GGG | - | chr2_3:48821978-48821997 | Msa0295980:intron | 40.0% | |
| !! | ATCCCAAATTGATGATGGTG+TGG | + | chr2_3:48821983-48822002 | None:intergenic | 40.0% |
| TCGTCATCCCAAATTGATGA+TGG | + | chr2_3:48825282-48825301 | None:intergenic | 40.0% | |
| CGTCATAAGAGAGCTTCAAA+TGG | + | chr2_3:48822017-48822036 | None:intergenic | 40.0% | |
| GAGAGAACATCGAATGAGAA+CGG | - | chr2_3:48822105-48822124 | Msa0295980:intron | 40.0% | |
| GGTTTATCGTCCAAAGTTGA+AGG | - | chr2_3:48822267-48822286 | Msa0295980:intron | 40.0% | |
| TCCAAAGTTGAAGGAGTTCT+TGG | - | chr2_3:48822276-48822295 | Msa0295980:intron | 40.0% | |
| TCCAAGAACTCCTTCAACTT+TGG | + | chr2_3:48822280-48822299 | None:intergenic | 40.0% | |
| ATCTGAAGAAACAAGGGATG+TGG | + | chr2_3:48825679-48825698 | None:intergenic | 40.0% | |
| TTCTGCTAAAGATTCAGTGC+AGG | - | chr2_3:48822425-48822444 | Msa0295980:intron | 40.0% | |
| GAAGGCTTGGAGATTGAATA+TGG | - | chr2_3:48825741-48825760 | Msa0295980:CDS | 40.0% | |
| !! | TATGGTATGATGGATTGCAC+GGG | - | chr2_3:48822465-48822484 | Msa0295980:intron | 40.0% |
| AACTATACCATTACCACTGC+TGG | + | chr2_3:48825790-48825809 | None:intergenic | 40.0% | |
| AAAACAACGGCTCTTACGGT+TGG | + | chr2_3:48821211-48821230 | Msa0295970:CDS | 45.0% | |
| GATCTTGAAGGACATTGAGC+AGG | + | chr2_3:48821252-48821271 | Msa0295970:CDS | 45.0% | |
| AAGATCACCAGCTAACCCAA+GGG | - | chr2_3:48821266-48821285 | Msa0295980:CDS | 45.0% | |
| !!! | ACTTTTTCCCTTGGGTTAGC+TGG | + | chr2_3:48821276-48821295 | Msa0295970:CDS | 45.0% |
| CAAAGATACTCGTTACCGAG+AGG | - | chr2_3:48821474-48821493 | Msa0295980:CDS | 45.0% | |
| AATGCTCATTCCTCCTTCCA+TGG | + | chr2_3:48821825-48821844 | None:intergenic | 45.0% | |
| GAGGAATGAGCATTTCAGCT+TGG | - | chr2_3:48821831-48821850 | Msa0295980:CDS | 45.0% | |
| ! | ATGCTCGTTTTATCGGCCTT+AGG | - | chr2_3:48821878-48821897 | Msa0295980:intron | 45.0% |
| GGAGACCAAGGGATTATACT+TGG | - | chr2_3:48821908-48821927 | Msa0295980:intron | 45.0% | |
| ! | GAAGCTCTCTTATGACGGAA+AGG | - | chr2_3:48822020-48822039 | Msa0295980:intron | 45.0% |
| AAGGATCTCGTAATCCCTGA+AGG | - | chr2_3:48822039-48822058 | Msa0295980:intron | 45.0% | |
| ! | ATCGAATGAGAACGGTGTCA+TGG | - | chr2_3:48822113-48822132 | Msa0295980:intron | 45.0% |
| ATGGATTCTACTGTCCTCCT+TGG | + | chr2_3:48822187-48822206 | None:intergenic | 45.0% | |
| TTTCAAAATCCGGCAAAGCC+AGG | - | chr2_3:48822318-48822337 | Msa0295980:intron | 45.0% | |
| ATCTGAAGATGCAAGGGATG+TGG | + | chr2_3:48822385-48822404 | None:intergenic | 45.0% | |
| GCTAAAGATTCAGTGCAGGA+AGG | - | chr2_3:48822429-48822448 | Msa0295980:intron | 45.0% | |
| ATGTTATGGGATGTACTCGG+TGG | - | chr2_3:48822769-48822788 | Msa0295980:intron | 45.0% | |
| TGAGTACAACCTTGCTCTCT+AGG | - | chr2_3:48822982-48823001 | Msa0295980:intron | 45.0% | |
| ! | TACAACCTTGCTCTCTAGGA+AGG | - | chr2_3:48822986-48823005 | Msa0295980:intron | 45.0% |
| ! | TGAAGTGCTATGCACAAGAC+CGG | + | chr2_3:48823025-48823044 | None:intergenic | 45.0% |
| CCTGCACTCAATCAGATTCA+TGG | + | chr2_3:48823153-48823172 | None:intergenic | 45.0% | |
| CCATGAATCTGATTGAGTGC+AGG | - | chr2_3:48823150-48823169 | Msa0295980:intron | 45.0% | |
| AATCTGATTGAGTGCAGGAC+CGG | - | chr2_3:48823155-48823174 | Msa0295980:intron | 45.0% | |
| !! | GATTTTAGCCTCTCCAAAGC+CGG | + | chr2_3:48823177-48823196 | None:intergenic | 45.0% |
| GTTAAGCAACTCAGAGCTGA+GGG | + | chr2_3:48823252-48823271 | None:intergenic | 45.0% | |
| AGTTAAGCAACTCAGAGCTG+AGG | + | chr2_3:48823253-48823272 | None:intergenic | 45.0% | |
| ! | CGTAGAGCGTTAAGTTCAGT+TGG | - | chr2_3:48823278-48823297 | Msa0295980:intron | 45.0% |
| ! | TCATGCCGACTGAAATGACA+TGG | - | chr2_3:48823441-48823460 | Msa0295980:intron | 45.0% |
| TACCCACAGAAATAGCCGAA+CGG | + | chr2_3:48823483-48823502 | None:intergenic | 45.0% | |
| !! | GTGTTTGTTTTCCCTCGTTG+AGG | - | chr2_3:48823505-48823524 | Msa0295980:intron | 45.0% |
| ATGAAATGCAGCCGAAAGTG+GGG | + | chr2_3:48823542-48823561 | None:intergenic | 45.0% | |
| CATGAAATGCAGCCGAAAGT+GGG | + | chr2_3:48823543-48823562 | None:intergenic | 45.0% | |
| CATGGCATGATCCGTTGATA+AGG | - | chr2_3:48823559-48823578 | Msa0295980:intron | 45.0% | |
| GACGTTATAAACAGGCAGCA+TGG | - | chr2_3:48823642-48823661 | Msa0295980:intron | 45.0% | |
| TGACTTCTACACGCACGTAT+TGG | - | chr2_3:48823718-48823737 | Msa0295980:intron | 45.0% | |
| AGGCTATATCAGCCGAACTA+TGG | + | chr2_3:48823772-48823791 | None:intergenic | 45.0% | |
| ACGTGAGTGAGATGAATTGC+TGG | + | chr2_3:48824409-48824428 | None:intergenic | 45.0% | |
| AAAACAACGGCTCTTACGGT+TGG | + | chr2_3:48821211-48821230 | Msa0295970:CDS | 45.0% | |
| !! | ATCTTGAAGGGCACTGAGTA+GGG | + | chr2_3:48824694-48824713 | None:intergenic | 45.0% |
| ! | GGTTAGCTGGTGATCTTGAA+GGG | + | chr2_3:48821263-48821282 | Msa0295970:CDS | 45.0% |
| ! | TTGCACTGAGTTTTGCACAC+AGG | + | chr2_3:48824764-48824783 | None:intergenic | 45.0% |
| CATGACTCTCCGCAATATCA+AGG | + | chr2_3:48824896-48824915 | None:intergenic | 45.0% | |
| CTTGATATTGCGGAGAGTCA+TGG | - | chr2_3:48824894-48824913 | Msa0295980:intron | 45.0% | |
| GATCCGCGACCATTACAATT+TGG | + | chr2_3:48825045-48825064 | None:intergenic | 45.0% | |
| ! | ATGCTCGTTTTATCGGCCTT+AGG | - | chr2_3:48821878-48821897 | Msa0295980:intron | 45.0% |
| GGAGACCAAGGGATTATACT+TGG | - | chr2_3:48821908-48821927 | Msa0295980:intron | 45.0% | |
| ! | GAAGCTCTCTTATGACGGAA+AGG | - | chr2_3:48822020-48822039 | Msa0295980:intron | 45.0% |
| AAGGATCTCGTAATCCCTGA+AGG | - | chr2_3:48822039-48822058 | Msa0295980:intron | 45.0% | |
| ! | ATCGAATGAGAACGGTGTCA+TGG | - | chr2_3:48822113-48822132 | Msa0295980:intron | 45.0% |
| ATGGATTCTACTGTCCTCCT+TGG | + | chr2_3:48822187-48822206 | None:intergenic | 45.0% | |
| TTTCAAAATCCGGCAAAGCC+AGG | - | chr2_3:48822318-48822337 | Msa0295980:intron | 45.0% | |
| GCTAAAGATTCAGTGCAGGA+AGG | - | chr2_3:48822429-48822448 | Msa0295980:intron | 45.0% | |
| !! | GGGTTAGCTGGTGATCTTGA+AGG | + | chr2_3:48821264-48821283 | Msa0295970:CDS | 50.0% |
| CAAGATCACCAGCTAACCCA+AGG | - | chr2_3:48821265-48821284 | Msa0295980:CDS | 50.0% | |
| TAATCCCTTGGTCTCCCTTG+CGG | + | chr2_3:48821904-48821923 | None:intergenic | 50.0% | |
| ! | ATTTTCCTCGGATTGCCACG+TGG | + | chr2_3:48822073-48822092 | None:intergenic | 50.0% |
| TGGCTATGCCAGTAGTTGGA+GGG | - | chr2_3:48822343-48822362 | Msa0295980:intron | 50.0% | |
| TTGTCTTCCCCTCCAACTAC+TGG | + | chr2_3:48822354-48822373 | None:intergenic | 50.0% | |
| AGATTCAGTGCAGGAAGGCA+TGG | - | chr2_3:48822434-48822453 | Msa0295980:intron | 50.0% | |
| !! | GGTATGATGGATTGCACTGG+TGG | - | chr2_3:48822468-48822487 | Msa0295980:intron | 50.0% |
| ! | CTTGCTCTCTAGGAAGGACA+GGG | - | chr2_3:48822992-48823011 | Msa0295980:intron | 50.0% |
| CAATCAGATTCATGGGCGCT+CGG | + | chr2_3:48823145-48823164 | None:intergenic | 50.0% | |
| !! | TCCCGTTCGGCTATTTCTGT+GGG | - | chr2_3:48823478-48823497 | Msa0295980:intron | 50.0% |
| ACCCACAGAAATAGCCGAAC+GGG | + | chr2_3:48823482-48823501 | None:intergenic | 50.0% | |
| TGCTACGATCACCTCAACGA+GGG | + | chr2_3:48823519-48823538 | None:intergenic | 50.0% | |
| TGATCGTAGCACCCCACTTT+CGG | - | chr2_3:48823528-48823547 | Msa0295980:intron | 50.0% | |
| CCATGAAATGCAGCCGAAAG+TGG | + | chr2_3:48823544-48823563 | None:intergenic | 50.0% | |
| CCACTTTCGGCTGCATTTCA+TGG | - | chr2_3:48823541-48823560 | Msa0295980:intron | 50.0% | |
| GCCTTCGCTTAACATTCCCT+CGG | - | chr2_3:48823788-48823807 | Msa0295980:intron | 50.0% | |
| !! | GATCTTGAAGGGCACTGAGT+AGG | + | chr2_3:48824695-48824714 | None:intergenic | 50.0% |
| !! | GGGTTAGCTGGTGATCTTGA+AGG | + | chr2_3:48821264-48821283 | Msa0295970:CDS | 50.0% |
| AGTGCTCATTCCTCCTTCCA+TGG | + | chr2_3:48825119-48825138 | None:intergenic | 50.0% | |
| GAGGAATGAGCACTTCAGCT+TGG | - | chr2_3:48825125-48825144 | Msa0295980:CDS | 50.0% | |
| TAATCCCTTGGTCTCCCTTG+CGG | + | chr2_3:48821904-48821923 | None:intergenic | 50.0% | |
| ACGTAGAGAGGTGACCTTCA+GGG | + | chr2_3:48825350-48825369 | None:intergenic | 50.0% | |
| TTGTCTTCCCCTCCAATGAC+CGG | + | chr2_3:48825648-48825667 | None:intergenic | 50.0% | |
| AGATTCAGTGCAGGAAGGCT+TGG | - | chr2_3:48825728-48825747 | Msa0295980:CDS | 50.0% | |
| GAAGGACATTGAGCAGGGCA+AGG | + | chr2_3:48821246-48821265 | Msa0295970:CDS | 55.0% | |
| TGCTTGGACCCTCGTTTCGT+TGG | - | chr2_3:48821775-48821794 | Msa0295980:CDS | 55.0% | |
| CATCCGCACCAACGAAACGA+GGG | + | chr2_3:48821786-48821805 | None:intergenic | 55.0% | |
| TTTATCGGCCTTAGGCCGCA+AGG | - | chr2_3:48821886-48821905 | Msa0295980:intron | 55.0% | |
| TTATCGGCCTTAGGCCGCAA+GGG | - | chr2_3:48821887-48821906 | Msa0295980:intron | 55.0% | |
| ACGTGGAGAGGTGACCTTCA+GGG | + | chr2_3:48822056-48822075 | None:intergenic | 55.0% | |
| CAATGTGGTGCCTGTCACCA+AGG | - | chr2_3:48822167-48822186 | Msa0295980:CDS | 55.0% | |
| ! | CTACTGTCCTCCTTGGTGAC+AGG | + | chr2_3:48822180-48822199 | None:intergenic | 55.0% |
| AAATCCGGCAAAGCCAGGTG+TGG | - | chr2_3:48822323-48822342 | Msa0295980:intron | 55.0% | |
| !! | ATAGCCACACCTGGCTTTGC+CGG | + | chr2_3:48822330-48822349 | None:intergenic | 55.0% |
| ACTACTGGCATAGCCACACC+TGG | + | chr2_3:48822339-48822358 | None:intergenic | 55.0% | |
| GGTGTGGCTATGCCAGTAGT+TGG | - | chr2_3:48822339-48822358 | Msa0295980:intron | 55.0% | |
| GTGGCTATGCCAGTAGTTGG+AGG | - | chr2_3:48822342-48822361 | Msa0295980:intron | 55.0% | |
| GGCTATGCCAGTAGTTGGAG+GGG | - | chr2_3:48822344-48822363 | Msa0295980:intron | 55.0% | |
| CCTGTCCTTCCTAGAGAGCA+AGG | + | chr2_3:48822994-48823013 | None:intergenic | 55.0% | |
| ! | CCTTGCTCTCTAGGAAGGAC+AGG | - | chr2_3:48822991-48823010 | Msa0295980:intron | 55.0% |
| ! | ATTGAGTGCAGGACCGGCTT+TGG | - | chr2_3:48823161-48823180 | Msa0295980:intron | 55.0% |
| !! | GTCCCGTTCGGCTATTTCTG+TGG | - | chr2_3:48823477-48823496 | Msa0295980:intron | 55.0% |
| GTGCTACGATCACCTCAACG+AGG | + | chr2_3:48823520-48823539 | None:intergenic | 55.0% | |
| ACCACAAGGGGCGATGAGTA+CGG | + | chr2_3:48823618-48823637 | None:intergenic | 55.0% | |
| GCCGAGGGAATGTTAAGCGA+AGG | + | chr2_3:48823792-48823811 | None:intergenic | 55.0% | |
| TCGCTTAACATTCCCTCGGC+TGG | - | chr2_3:48823792-48823811 | Msa0295980:intron | 55.0% | |
| CGCTTAACATTCCCTCGGCT+GGG | - | chr2_3:48823793-48823812 | Msa0295980:intron | 55.0% | |
| TTAACATTCCCTCGGCTGGG+AGG | - | chr2_3:48823796-48823815 | Msa0295980:intron | 55.0% | |
| GATCTGCATGCTTGGACCCT+CGG | - | chr2_3:48825061-48825080 | Msa0295980:CDS | 55.0% | |
| TTTATCGGCCTTAGGCCGCA+AGG | - | chr2_3:48821886-48821905 | Msa0295980:intron | 55.0% | |
| TTATCGGCCTTAGGCCGCAA+GGG | - | chr2_3:48821887-48821906 | Msa0295980:intron | 55.0% | |
| CACGTAGAGAGGTGACCTTC+AGG | + | chr2_3:48825351-48825370 | None:intergenic | 55.0% | |
| CTGAAGGTCACCTCTCTACG+TGG | - | chr2_3:48825349-48825368 | Msa0295980:intron | 55.0% | |
| CAATGTGGTGCCTGTCACCA+AGG | - | chr2_3:48822167-48822186 | Msa0295980:CDS | 55.0% | |
| ! | CTACTGTCCTCCTTGGTGAC+AGG | + | chr2_3:48822180-48822199 | None:intergenic | 55.0% |
| TGGCAATGCCGGTCATTGGA+GGG | - | chr2_3:48825637-48825656 | Msa0295980:CDS | 55.0% | |
| !! | GGTATGATGGATTGCACGGG+TGG | - | chr2_3:48825762-48825781 | Msa0295980:CDS | 55.0% |
| GGACCCTCGTTTCGTTGGTG+CGG | - | chr2_3:48821780-48821799 | Msa0295980:CDS | 60.0% | |
| CCATCCGCACCAACGAAACG+AGG | + | chr2_3:48821787-48821806 | None:intergenic | 60.0% | |
| CCTCGTTTCGTTGGTGCGGA+TGG | - | chr2_3:48821784-48821803 | Msa0295980:CDS | 60.0% | |
| TTGGTCTCCCTTGCGGCCTA+AGG | + | chr2_3:48821897-48821916 | None:intergenic | 60.0% | |
| TTAGGCCGCAAGGGAGACCA+AGG | - | chr2_3:48821896-48821915 | Msa0295980:intron | 60.0% | |
| TAGGCCGCAAGGGAGACCAA+GGG | - | chr2_3:48821897-48821916 | Msa0295980:intron | 60.0% | |
| CACGTGGAGAGGTGACCTTC+AGG | + | chr2_3:48822057-48822076 | None:intergenic | 60.0% | |
| CTGAAGGTCACCTCTCCACG+TGG | - | chr2_3:48822055-48822074 | Msa0295980:intron | 60.0% | |
| TGTGGTGCCTGTCACCAAGG+AGG | - | chr2_3:48822170-48822189 | Msa0295980:CDS | 60.0% | |
| ! | TGCACTGGTGGTGCTAGCAG+TGG | - | chr2_3:48822480-48822499 | Msa0295980:intron | 60.0% |
| ! | GGTGGTGCTAGCAGTGGCAA+TGG | - | chr2_3:48822486-48822505 | Msa0295980:intron | 60.0% |
| TCCGTACTCATCGCCCCTTG+TGG | - | chr2_3:48823614-48823633 | Msa0295980:intron | 60.0% | |
| ACGAGTTTCCTCCCAGCCGA+GGG | + | chr2_3:48823807-48823826 | None:intergenic | 60.0% | |
| TGGTCGCGGATCTGCATGCT+TGG | - | chr2_3:48825053-48825072 | Msa0295980:CDS | 60.0% | |
| ! | TGCTTGGACCCTCGGTTCGT+TGG | - | chr2_3:48825069-48825088 | Msa0295980:CDS | 60.0% |
| CATCCGCACCAACGAACCGA+GGG | + | chr2_3:48825080-48825099 | None:intergenic | 60.0% | |
| TTGGTCTCCCTTGCGGCCTA+AGG | + | chr2_3:48821897-48821916 | None:intergenic | 60.0% | |
| TTAGGCCGCAAGGGAGACCA+AGG | - | chr2_3:48821896-48821915 | Msa0295980:intron | 60.0% | |
| TAGGCCGCAAGGGAGACCAA+GGG | - | chr2_3:48821897-48821916 | Msa0295980:intron | 60.0% | |
| CGTCGGATTGCCACGTAGAG+AGG | + | chr2_3:48825362-48825381 | None:intergenic | 60.0% | |
| TGTGGTGCCTGTCACCAAGG+AGG | - | chr2_3:48822170-48822189 | Msa0295980:CDS | 60.0% | |
| AAATCCGGCAAAGCCAGGCG+TGG | - | chr2_3:48825617-48825636 | Msa0295980:CDS | 60.0% | |
| !! | ATTGCCACGCCTGGCTTTGC+CGG | + | chr2_3:48825624-48825643 | None:intergenic | 60.0% |
| AAAGCCAGGCGTGGCAATGC+CGG | - | chr2_3:48825626-48825645 | Msa0295980:CDS | 60.0% | |
| GTGGCAATGCCGGTCATTGG+AGG | - | chr2_3:48825636-48825655 | Msa0295980:CDS | 60.0% | |
| GGCAATGCCGGTCATTGGAG+GGG | - | chr2_3:48825638-48825657 | Msa0295980:CDS | 60.0% | |
| ! | GGTGGTGCCAGCAGTGGTAA+TGG | - | chr2_3:48825780-48825799 | Msa0295980:CDS | 60.0% |
| GGTCCAAGCACGCAGATCCG+CGG | + | chr2_3:48821765-48821784 | None:intergenic | 65.0% | |
| CCTCGGATTGCCACGTGGAG+AGG | + | chr2_3:48822068-48822087 | None:intergenic | 65.0% | |
| CCTCTCCACGTGGCAATCCG+AGG | - | chr2_3:48822065-48822084 | Msa0295980:intron | 65.0% | |
| GGAAGGACAGGGTTCAGCGC+CGG | - | chr2_3:48823003-48823022 | Msa0295980:intron | 65.0% | |
| !! | GTGCAGGACCGGCTTTGGAG+AGG | - | chr2_3:48823166-48823185 | Msa0295980:intron | 65.0% |
| GACGAGTTTCCTCCCAGCCG+AGG | + | chr2_3:48823808-48823827 | None:intergenic | 65.0% | |
| ! | GGACCCTCGGTTCGTTGGTG+CGG | - | chr2_3:48825074-48825093 | Msa0295980:CDS | 65.0% |
| CCATCCGCACCAACGAACCG+AGG | + | chr2_3:48825081-48825100 | None:intergenic | 65.0% | |
| ! | CCTCGGTTCGTTGGTGCGGA+TGG | - | chr2_3:48825078-48825097 | Msa0295980:CDS | 65.0% |
| ATGACCGGCATTGCCACGCC+TGG | + | chr2_3:48825633-48825652 | None:intergenic | 65.0% | |
| GGCGTGGCAATGCCGGTCAT+TGG | - | chr2_3:48825633-48825652 | Msa0295980:CDS | 65.0% | |
| TGGCCGCGGATCTGCGTGCT+TGG | - | chr2_3:48821759-48821778 | Msa0295980:CDS | 70.0% | |
| ! | TGCACGGGTGGTGCCAGCAG+TGG | - | chr2_3:48825774-48825793 | Msa0295980:CDS | 70.0% |
| Chromosome | Type | Strat | End | Strand | Name |
|---|---|---|---|---|---|
| chr2_3 | gene | 48821105 | 48825821 | 48821105 | ID=Msa0295980;Name=Msa0295980 |
| chr2_3 | mRNA | 48821105 | 48825821 | 48821105 | ID=Msa0295980-mRNA-1;Parent=Msa0295980;Name=Msa0295980-mRNA-1;_AED=0.06;_eAED=0.06;_QI=0|0|0|1|0.2|0.16|6|0|601 |
| chr2_3 | exon | 48825584 | 48825821 | 48825584 | ID=Msa0295980-mRNA-1:exon:15374;Parent=Msa0295980-mRNA-1 |
| chr2_3 | exon | 48824981 | 48825186 | 48824981 | ID=Msa0295980-mRNA-1:exon:15373;Parent=Msa0295980-mRNA-1 |
| chr2_3 | exon | 48824659 | 48824902 | 48824659 | ID=Msa0295980-mRNA-1:exon:15372;Parent=Msa0295980-mRNA-1 |
| chr2_3 | exon | 48824414 | 48824637 | 48824414 | ID=Msa0295980-mRNA-1:exon:15371;Parent=Msa0295980-mRNA-1 |
| chr2_3 | exon | 48822141 | 48822246 | 48822141 | ID=Msa0295980-mRNA-1:exon:15370;Parent=Msa0295980-mRNA-1 |
| chr2_3 | exon | 48821105 | 48821892 | 48821105 | ID=Msa0295980-mRNA-1:exon:15369;Parent=Msa0295980-mRNA-1 |
| chr2_3 | CDS | 48825584 | 48825821 | 48825584 | ID=Msa0295980-mRNA-1:cds;Parent=Msa0295980-mRNA-1 |
| chr2_3 | CDS | 48824981 | 48825186 | 48824981 | ID=Msa0295980-mRNA-1:cds;Parent=Msa0295980-mRNA-1 |
| chr2_3 | CDS | 48824659 | 48824902 | 48824659 | ID=Msa0295980-mRNA-1:cds;Parent=Msa0295980-mRNA-1 |
| chr2_3 | CDS | 48824414 | 48824637 | 48824414 | ID=Msa0295980-mRNA-1:cds;Parent=Msa0295980-mRNA-1 |
| chr2_3 | CDS | 48822141 | 48822246 | 48822141 | ID=Msa0295980-mRNA-1:cds;Parent=Msa0295980-mRNA-1 |
| chr2_3 | CDS | 48821105 | 48821892 | 48821105 | ID=Msa0295980-mRNA-1:cds;Parent=Msa0295980-mRNA-1 |
| Gene Sequence |
| Protein sequence |
