Alfalfa Gene Editing Database
Alfalfa Gene Editing Database
| Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa0643940 | XP_003606608.2 | 96.141 | 933 | 29 | 1 | 1 | 933 | 1 | 926 | 0.0 | 1855 |
| Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa0643940 | sp|F4JI44|NDX_ARATH | 39.322 | 974 | 450 | 19 | 24 | 927 | 9 | 911 | 0.0 | 587 |
| Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa0643940 | G7JTN6 | 96.141 | 933 | 29 | 1 | 1 | 933 | 1 | 926 | 0.0 | 1855 |
| Gene ID | Type | Classification |
|---|
| Gene ID | Type | Classification |
|---|
Co-expression Network
| Gene1 | Gene2 | correlation coefficient | p_value | FDR |
|---|---|---|---|---|
| Msa0008110 | Msa0643940 | 0.827828 | 1.260672e-54 | -8.615850e-47 |
| Msa0017510 | Msa0643940 | 0.807264 | 5.502610e-50 | -8.615850e-47 |
| Msa0028420 | Msa0643940 | 0.804724 | 1.883137e-49 | -8.615850e-47 |
| Msa0036870 | Msa0643940 | 0.818990 | 1.469200e-52 | -8.615850e-47 |
| Msa0047070 | Msa0643940 | 0.816142 | 6.442068e-52 | -8.615850e-47 |
| Msa0061290 | Msa0643940 | 0.831096 | 2.025531e-55 | -8.615850e-47 |
| Msa0075220 | Msa0643940 | 0.802814 | 4.692269e-49 | -8.615850e-47 |
| Msa0081050 | Msa0643940 | 0.804925 | 1.709479e-49 | -8.615850e-47 |
| Msa0081090 | Msa0643940 | 0.815377 | 9.535667e-52 | -8.615850e-47 |
| Msa0089630 | Msa0643940 | 0.811243 | 7.716994e-51 | -8.615850e-47 |
| Msa0090400 | Msa0643940 | 0.878995 | 1.787353e-69 | -8.615850e-47 |
| Msa0115080 | Msa0643940 | 0.827347 | 1.645225e-54 | -8.615850e-47 |
| Msa0602880 | Msa0643940 | 0.956385 | 3.341603e-114 | -8.615850e-47 |
| Msa0626450 | Msa0643940 | 0.814056 | 1.870715e-51 | -8.615850e-47 |
| Msa0626490 | Msa0643940 | 0.814714 | 1.338658e-51 | -8.615850e-47 |
| Msa0643940 | Msa0658240 | 0.806505 | 7.964061e-50 | -8.615850e-47 |
| Msa0643940 | Msa0661650 | 0.808785 | 2.611468e-50 | -8.615850e-47 |
| Msa0643940 | Msa0664600 | 0.816616 | 5.046241e-52 | -8.615850e-47 |
| Msa0643940 | Msa0681250 | 0.800696 | 1.276835e-48 | -8.615850e-47 |
| Msa0643940 | Msa0681270 | 0.810866 | 9.314420e-51 | -8.615850e-47 |
| Msa0643940 | Msa0683470 | 0.803256 | 3.802716e-49 | -8.615850e-47 |
| Msa0643940 | Msa0683570 | 0.800631 | 1.316112e-48 | -8.615850e-47 |
| Msa0643940 | Msa0683740 | 0.896374 | 3.920972e-76 | -8.615850e-47 |
| Msa0643940 | Msa0689520 | 0.816918 | 4.316892e-52 | -8.615850e-47 |
| Msa0643940 | Msa0691980 | 0.805771 | 1.136208e-49 | -8.615850e-47 |
| Msa0643940 | Msa0749740 | 0.809518 | 1.818377e-50 | -8.615850e-47 |
| Msa0643940 | Msa0754520 | 0.849857 | 2.469747e-60 | -8.615850e-47 |
| Msa0643940 | Msa0795560 | 0.803676 | 3.111709e-49 | -8.615850e-47 |
| Msa0643940 | Msa0816910 | 0.808255 | 3.388121e-50 | -8.615850e-47 |
| Msa0643940 | Msa0833220 | 0.850461 | 1.673485e-60 | -8.615850e-47 |
| Msa0643940 | Msa0861600 | 0.806369 | 8.507812e-50 | -8.615850e-47 |
| Msa0643940 | Msa0880680 | 0.804343 | 2.260513e-49 | -8.615850e-47 |
| Msa0643940 | Msa0945110 | 0.846800 | 1.730127e-59 | -8.615850e-47 |
| Msa0643940 | Msa1004800 | 0.807675 | 4.502572e-50 | -8.615850e-47 |
| Msa0643940 | Msa1018690 | 0.814551 | 1.454530e-51 | -8.615850e-47 |
| Msa0643940 | Msa1021210 | 0.826174 | 3.136026e-54 | -8.615850e-47 |
| Msa0643940 | Msa1029250 | 0.812221 | 4.728913e-51 | -8.615850e-47 |
| Msa0643940 | Msa1030800 | 0.801499 | 8.747951e-49 | -8.615850e-47 |
| Msa0643940 | Msa1041670 | 0.801534 | 8.607143e-49 | -8.615850e-47 |
| Msa0643940 | Msa1045140 | 0.826334 | 2.872001e-54 | -8.615850e-47 |
| Msa0643940 | Msa1047080 | 0.800813 | 1.208457e-48 | -8.615850e-47 |
| Msa0643940 | Msa1081330 | 0.816415 | 5.595184e-52 | -8.615850e-47 |
| Msa0643940 | Msa1084960 | 0.804724 | 1.883137e-49 | -8.615850e-47 |
| Msa0643940 | Msa1096960 | 0.840490 | 8.428230e-58 | -8.615850e-47 |
| Msa0643940 | Msa1111130 | 0.802598 | 5.200156e-49 | -8.615850e-47 |
| Msa0643940 | Msa1113340 | 0.830424 | 2.959628e-55 | -8.615850e-47 |
| Msa0643940 | Msa1119940 | 0.816758 | 4.688810e-52 | -8.615850e-47 |
| Msa0643940 | Msa1140220 | 0.809872 | 1.526198e-50 | -8.615850e-47 |
| Msa0643940 | Msa1162150 | 0.814783 | 1.292178e-51 | -8.615850e-47 |
| Msa0643940 | Msa1171710 | 0.830778 | 2.424383e-55 | -8.615850e-47 |
| Msa0643940 | Msa1192090 | 0.823260 | 1.524709e-53 | -8.615850e-47 |
| Msa0643940 | Msa1199570 | 0.816212 | 6.211109e-52 | -8.615850e-47 |
| Msa0643940 | Msa1209460 | 0.809007 | 2.341110e-50 | -8.615850e-47 |
| Msa0643940 | Msa1222850 | 0.823283 | 1.505501e-53 | -8.615850e-47 |
| Msa0643940 | Msa1223470 | 0.839918 | 1.188588e-57 | -8.615850e-47 |
| Msa0643940 | Msa1229500 | 0.807893 | 4.046658e-50 | -8.615850e-47 |
| Msa0643940 | Msa1242670 | 0.802491 | 5.471511e-49 | -8.615850e-47 |
| Msa0643940 | Msa1268670 | 0.807743 | 4.355238e-50 | -8.615850e-47 |
| Msa0643940 | Msa1269480 | 0.859796 | 3.227753e-63 | -8.615850e-47 |
| Msa0643940 | Msa1302830 | 0.829672 | 4.514776e-55 | -8.615850e-47 |
| Msa0643940 | Msa1321340 | 0.814563 | 1.445878e-51 | -8.615850e-47 |
| Msa0643940 | Msa1328710 | 0.814833 | 1.259380e-51 | -8.615850e-47 |
| Msa0643940 | Msa1330410 | 0.815603 | 8.494166e-52 | -8.615850e-47 |
| Msa0643940 | Msa1332070 | 0.800733 | 1.255113e-48 | -8.615850e-47 |
| Msa0643940 | Msa1360060 | 0.813778 | 2.154596e-51 | -8.615850e-47 |
| Msa0643940 | Msa1369550 | 0.843732 | 1.169525e-58 | -8.615850e-47 |
| Msa0643940 | Msa1372230 | 0.804615 | 1.984345e-49 | -8.615850e-47 |
| Msa0643940 | Msa1391770 | 0.805205 | 1.493802e-49 | -8.615850e-47 |
| Msa0643940 | Msa1402400 | 0.804590 | 2.007911e-49 | -8.615850e-47 |
| Msa0643940 | Msa1422420 | 0.851885 | 6.628799e-61 | -8.615850e-47 |
| Msa0643940 | Msa1440960 | 0.813366 | 2.654393e-51 | -8.615850e-47 |
| Msa0643940 | Msa1454140 | 0.815066 | 1.118077e-51 | -8.615850e-47 |
| Msa0124060 | Msa0643940 | 0.827117 | 1.867386e-54 | -8.615850e-47 |
| Msa0124280 | Msa0643940 | 0.801450 | 8.952545e-49 | -8.615850e-47 |
| Msa0131900 | Msa0643940 | 0.826448 | 2.698176e-54 | -8.615850e-47 |
| Msa0136650 | Msa0643940 | 0.810658 | 1.033020e-50 | -8.615850e-47 |
| Msa0137880 | Msa0643940 | 0.868025 | 8.868069e-66 | -8.615850e-47 |
| Msa0139060 | Msa0643940 | 0.809535 | 1.803238e-50 | -8.615850e-47 |
| Msa0149370 | Msa0643940 | 0.801364 | 9.322124e-49 | -8.615850e-47 |
| Msa0152350 | Msa0643940 | 0.824088 | 9.753869e-54 | -8.615850e-47 |
| Msa0157290 | Msa0643940 | 0.807731 | 4.380495e-50 | -8.615850e-47 |
| Msa0167520 | Msa0643940 | 0.818547 | 1.851784e-52 | -8.615850e-47 |
| Msa0168500 | Msa0643940 | 0.816990 | 4.159042e-52 | -8.615850e-47 |
| Msa0175780 | Msa0643940 | 0.805217 | 1.484848e-49 | -8.615850e-47 |
| Msa0225460 | Msa0643940 | 0.840167 | 1.023276e-57 | -8.615850e-47 |
| Msa0225680 | Msa0643940 | 0.846165 | 2.577950e-59 | -8.615850e-47 |
| Msa0379770 | Msa0643940 | 0.808704 | 2.717923e-50 | -8.615850e-47 |
| Msa0380620 | Msa0643940 | 0.807151 | 5.815367e-50 | -8.615850e-47 |
| Msa0397150 | Msa0643940 | 0.807156 | 5.799286e-50 | -8.615850e-47 |
| Msa0417880 | Msa0643940 | 0.811741 | 6.014468e-51 | -8.615850e-47 |
| Msa0419700 | Msa0643940 | 0.820983 | 5.139732e-53 | -8.615850e-47 |
| Msa0428150 | Msa0643940 | 0.834879 | 2.321948e-56 | -8.615850e-47 |
| Msa0430260 | Msa0643940 | 0.811288 | 7.546000e-51 | -8.615850e-47 |
| Msa0434350 | Msa0643940 | 0.814039 | 1.887546e-51 | -8.615850e-47 |
| Msa0442830 | Msa0643940 | 0.819341 | 1.222070e-52 | -8.615850e-47 |
| Msa0462500 | Msa0643940 | 0.839108 | 1.929638e-57 | -8.615850e-47 |
| Msa0465410 | Msa0643940 | 0.836104 | 1.137571e-56 | -8.615850e-47 |
| Msa0467490 | Msa0643940 | 0.836507 | 8.987657e-57 | -8.615850e-47 |
| Msa0474520 | Msa0643940 | 0.830609 | 2.666492e-55 | -8.615850e-47 |
| Msa0476650 | Msa0643940 | 0.804319 | 2.287056e-49 | -8.615850e-47 |
| Msa0255090 | Msa0643940 | 0.816644 | 4.972988e-52 | -8.615850e-47 |
| Msa0259380 | Msa0643940 | 0.820687 | 6.012985e-53 | -8.615850e-47 |
| Msa0260780 | Msa0643940 | 0.806760 | 7.033295e-50 | -8.615850e-47 |
| Msa0261340 | Msa0643940 | 0.808572 | 2.899115e-50 | -8.615850e-47 |
| Msa0267110 | Msa0643940 | 0.866591 | 2.549757e-65 | -8.615850e-47 |
| Msa0272660 | Msa0643940 | 0.807705 | 4.436898e-50 | -8.615850e-47 |
| Msa0291540 | Msa0643940 | 0.800376 | 1.483496e-48 | -8.615850e-47 |
| Msa0292400 | Msa0643940 | 0.819726 | 9.982068e-53 | -8.615850e-47 |
| Msa0511270 | Msa0643940 | 0.835888 | 1.291046e-56 | -8.615850e-47 |
| Msa0511750 | Msa0643940 | 0.804828 | 1.790812e-49 | -8.615850e-47 |
| Msa0532070 | Msa0643940 | 0.800096 | 1.691343e-48 | -8.615850e-47 |
| Msa0538500 | Msa0643940 | 0.806531 | 7.861071e-50 | -8.615850e-47 |
| Msa0547900 | Msa0643940 | 0.962682 | 3.605718e-121 | -8.615850e-47 |
| Msa0569200 | Msa0643940 | 0.838281 | 3.155783e-57 | -8.615850e-47 |
| Msa0582450 | Msa0643940 | 0.802684 | 4.992341e-49 | -8.615850e-47 |
| Msa0586190 | Msa0643940 | 0.802341 | 5.874321e-49 | -8.615850e-47 |
| Msa0597790 | Msa0643940 | 0.809385 | 1.942707e-50 | -8.615850e-47 |
PPI
| Gene1 | Gene2 | Type |
|---|
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa0643940 | MtrunA17_Chr4g0030801 | 96.141 | 933 | 29 | 1 | 1 | 933 | 1 | 926 | 0.0 | 1855 |
| Msa0643940 | MtrunA17_Chr2g0327751 | 56.861 | 962 | 319 | 9 | 11 | 932 | 4 | 909 | 0.0 | 1046 |
| Msa0643940 | MtrunA17_Chr4g0030281 | 44.048 | 84 | 44 | 1 | 68 | 148 | 602 | 685 | 3.97e-13 | 73.6 |
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa0643940 | AT4G03090.5 | 39.916 | 957 | 443 | 19 | 24 | 927 | 18 | 895 | 0.0 | 594 |
| Msa0643940 | AT4G03090.2 | 39.916 | 957 | 443 | 19 | 24 | 927 | 9 | 886 | 0.0 | 594 |
| Msa0643940 | AT4G03090.3 | 39.916 | 957 | 443 | 19 | 24 | 927 | 9 | 886 | 0.0 | 594 |
| Msa0643940 | AT4G03090.1 | 39.322 | 974 | 450 | 19 | 24 | 927 | 9 | 911 | 0.0 | 587 |
| Msa0643940 | AT4G03090.4 | 43.094 | 724 | 368 | 14 | 24 | 734 | 9 | 701 | 1.82e-167 | 506 |
Find 185 sgRNAs with CRISPR-Local
Find 796 sgRNAs with CRISPR-GE
CRISPR-Local
| sgRNA_sequence | on_target_score | Position | Region |
|---|---|---|---|
| GGTCAAGTTACCTTAGAATT+TGG | 0.180899 | 4_3:-47448274 | None:intergenic |
| ACTCACAATGGATAGAATTT+TGG | 0.181075 | 4_3:-47445479 | None:intergenic |
| TGCTTCAGTTGGATGGATTT+TGG | 0.186617 | 4_3:+47447723 | Msa0643940:CDS |
| GTGCCAGCAGAAATTGTTTA+AGG | 0.186702 | 4_3:+47443437 | Msa0643940:CDS |
| CAAACACTATTTACTTCTTC+TGG | 0.187242 | 4_3:+47451145 | Msa0643940:CDS |
| GTGATAGGTTGACATATTTA+TGG | 0.194667 | 4_3:+47443254 | Msa0643940:intron |
| CGCCGTTATCTGCATGATTA+AGG | 0.207862 | 4_3:-47451893 | None:intergenic |
| CTGCTGACCTGATCAAATTT+AGG | 0.234197 | 4_3:-47442267 | None:intergenic |
| AGCAGCTTACATCTATTAAC+AGG | 0.261606 | 4_3:+47442813 | Msa0643940:CDS |
| ATATTTATGGATGCAGCTTT+TGG | 0.268382 | 4_3:+47443267 | Msa0643940:CDS |
| TAGTTTGATAATGAATTTCT+AGG | 0.269949 | 4_3:+47453169 | Msa0643940:three_prime_UTR |
| GACTTGTTGAAGTCTGCTTT+TGG | 0.276489 | 4_3:+47447015 | Msa0643940:CDS |
| CTGCTTCTTATGCACATAAT+AGG | 0.284010 | 4_3:+47447818 | Msa0643940:CDS |
| TTGCTAACAGTAGCAGCTTT+AGG | 0.287339 | 4_3:-47448107 | None:intergenic |
| GAAAGAGCTTGGAGGAATTA+GGG | 0.287696 | 4_3:+47452780 | Msa0643940:CDS |
| AACTATAATGAATGATAAAA+TGG | 0.288503 | 4_3:+47452130 | Msa0643940:CDS |
| GGAAAGAGCTTGGAGGAATT+AGG | 0.291098 | 4_3:+47452779 | Msa0643940:CDS |
| TCAACGCCAGATAAGCAAAA+AGG | 0.295843 | 4_3:+47452525 | Msa0643940:CDS |
| CCTTTCCCATCTGAACTTAC+TGG | 0.302192 | 4_3:+47452854 | Msa0643940:CDS |
| GGAGCGCCTGCTCAATAATA+AGG | 0.302931 | 4_3:+47443458 | Msa0643940:CDS |
| GGCTCATTTCGCTGCATATC+TGG | 0.304092 | 4_3:-47452065 | None:intergenic |
| CTCTGTTTCTGAGAGATTAG+AGG | 0.309355 | 4_3:-47447671 | None:intergenic |
| TCTTGCTCACCAAGATTGTT+AGG | 0.321508 | 4_3:-47452573 | None:intergenic |
| ATCACCACAAAGTTTAGATT+TGG | 0.321677 | 4_3:+47445850 | Msa0643940:CDS |
| CTATTTACTTCTTCTGGATC+TGG | 0.327644 | 4_3:+47451151 | Msa0643940:CDS |
| ATCTTGGCGACGACTTAAAT+AGG | 0.332010 | 4_3:+47451742 | Msa0643940:CDS |
| GGTCAGTTCGCGTTGTTGTT+AGG | 0.334242 | 4_3:+47443289 | Msa0643940:CDS |
| GATCCATTTGCAGGCATTCC+AGG | 0.356203 | 4_3:-47448043 | None:intergenic |
| GCTGCATTTCGCTGCATCTC+TGG | 0.361941 | 4_3:-47452185 | None:intergenic |
| TAAGCTAGCCCGCACATCTA+AGG | 0.365530 | 4_3:+47452497 | Msa0643940:CDS |
| GGAATTAGGGGTCTATGTTA+TGG | 0.366014 | 4_3:+47452793 | Msa0643940:CDS |
| TTTCAGAAAAGTTGTTTGTA+TGG | 0.369150 | 4_3:-47453037 | None:intergenic |
| GAGTCGGAGGACACTCTTAC+TGG | 0.372462 | 4_3:-47452549 | None:intergenic |
| TTGTAGGAGGCTCAGAGTAT+AGG | 0.374937 | 4_3:+47451588 | Msa0643940:intron |
| TTAATCTGTAAAAGCCCAAT+TGG | 0.379979 | 4_3:-47447078 | None:intergenic |
| ACCATCTCGCAGCGGTGAAC+AGG | 0.381317 | 4_3:+47441784 | Msa0643940:CDS |
| TGATAAAATGGTGGAATTGA+TGG | 0.382793 | 4_3:+47452142 | Msa0643940:CDS |
| TGATAAACTGGTGGAATTGA+TGG | 0.383375 | 4_3:+47452022 | Msa0643940:CDS |
| GCAGAGGCTGAAAGAAAGTT+AGG | 0.383489 | 4_3:+47452887 | Msa0643940:CDS |
| GTAGAGAAGCCTCACATTGC+TGG | 0.389328 | 4_3:-47443398 | None:intergenic |
| TTAGCCAAATCTAAACTTTG+TGG | 0.394390 | 4_3:-47445854 | None:intergenic |
| TGTAGGAGGCTCAGAGTATA+GGG | 0.395624 | 4_3:+47451589 | Msa0643940:intron |
| GCTTGGAAATGCAGAATTAT+CGG | 0.398959 | 4_3:-47451685 | None:intergenic |
| TGGTAAAGGAAAGGTACTTC+AGG | 0.401508 | 4_3:+47452739 | Msa0643940:CDS |
| AACTGTGGTAAATGATAAAC+TGG | 0.402097 | 4_3:+47452010 | Msa0643940:CDS |
| TTTGGATAATAGTTCATCAA+TGG | 0.406126 | 4_3:+47447741 | Msa0643940:CDS |
| ATTTAGATAGATCCATTTGC+AGG | 0.409607 | 4_3:-47448052 | None:intergenic |
| GCAAAACATTGGCAATATCT+TGG | 0.414068 | 4_3:-47442854 | None:intergenic |
| AGGAGGATGTCCAAATTCTA+AGG | 0.414848 | 4_3:+47448264 | Msa0643940:CDS |
| TTTGTGTACACAGATTGATA+TGG | 0.417063 | 4_3:+47442110 | Msa0643940:intron |
| AATCTTCATTGTCATGTTCC+CGG | 0.420015 | 4_3:+47447868 | Msa0643940:CDS |
| GCCTGTTCACCGCTGCGAGA+TGG | 0.425180 | 4_3:-47441785 | None:intergenic |
| AGAGTTGAAAACACAAATCT+TGG | 0.425827 | 4_3:+47451726 | Msa0643940:CDS |
| ATCTATCTAAATTGCTGCCT+GGG | 0.438721 | 4_3:+47448063 | Msa0643940:CDS |
| TTCAGAAAAGTTGTTTGTAT+GGG | 0.439328 | 4_3:-47453036 | None:intergenic |
| CGAACCTGCTGAACTTGATA+AGG | 0.441242 | 4_3:+47451638 | Msa0643940:CDS |
| AAGACTGCAGTACAAGAATT+CGG | 0.442911 | 4_3:-47452937 | None:intergenic |
| TATTTACTTCTTCTGGATCT+GGG | 0.444435 | 4_3:+47451152 | Msa0643940:CDS |
| GCAGGTTCGTTTACTTGTAA+AGG | 0.444577 | 4_3:-47451624 | None:intergenic |
| TGATAAGGTTGGTAACTTGA+AGG | 0.446954 | 4_3:+47451653 | Msa0643940:CDS |
| ATGCAGCGTCACTTCAATCA+TGG | 0.448196 | 4_3:+47452201 | Msa0643940:CDS |
| TATGATTTATTTGCTTCAGT+TGG | 0.450489 | 4_3:+47447712 | Msa0643940:CDS |
| GGAAAACCTTATTATTGAGC+AGG | 0.450872 | 4_3:-47443464 | None:intergenic |
| GATCTATCTAAATTGCTGCC+TGG | 0.452205 | 4_3:+47448062 | Msa0643940:CDS |
| GGACCAACCTTCACAACGGC+CGG | 0.452235 | 4_3:-47447887 | None:intergenic |
| ATTTATTTGCTTCAGTTGGA+TGG | 0.453068 | 4_3:+47447716 | Msa0643940:CDS |
| GCTAGCTTCAACTAGATTCA+AGG | 0.455483 | 4_3:+47452991 | Msa0643940:three_prime_UTR |
| TCGGCTTCCTAAATTTGATC+AGG | 0.458179 | 4_3:+47442260 | Msa0643940:CDS |
| CATCCTTTAGTAATCTATAA+AGG | 0.458489 | 4_3:-47441973 | None:intergenic |
| ACTGATAGAAGATACCCAAT+TGG | 0.461889 | 4_3:+47447063 | Msa0643940:CDS |
| GTATTATGTTGACCTATGCT+TGG | 0.463649 | 4_3:-47451702 | None:intergenic |
| TCCGACTCACCTAACAATCT+TGG | 0.475188 | 4_3:+47452564 | Msa0643940:CDS |
| CAACATCAGGTAGGAGGTAA+AGG | 0.475878 | 4_3:+47451765 | Msa0643940:CDS |
| ATTGATGGAGAGGGCACTCT+TGG | 0.478781 | 4_3:+47452157 | Msa0643940:CDS |
| GTTCCTGGAATGCCTGCAAA+TGG | 0.480485 | 4_3:+47448040 | Msa0643940:CDS |
| TGAATCTAGTTGAAGCTAGC+AGG | 0.480492 | 4_3:-47452988 | None:intergenic |
| GGCTAAATCTGTTGCAGTGG+AGG | 0.483726 | 4_3:+47445871 | Msa0643940:CDS |
| GGACCTTTATAGATTACTAA+AGG | 0.485737 | 4_3:+47441970 | Msa0643940:CDS |
| AGACGGAGGATTTGATTCCA+TGG | 0.486827 | 4_3:-47443352 | None:intergenic |
| TATAGATTACTAAAGGATGC+TGG | 0.490100 | 4_3:+47441977 | Msa0643940:CDS |
| CATGTTCCCGGCCGTTGTGA+AGG | 0.491045 | 4_3:+47447880 | Msa0643940:CDS |
| GGATCGTCGCTGGAATTTCA+AGG | 0.491100 | 4_3:+47445449 | Msa0643940:CDS |
| TCAGATACTAGTTCTGCAAA+AGG | 0.492216 | 4_3:+47451861 | Msa0643940:CDS |
| TGAAACTCCGGACGATGAAA+AGG | 0.493811 | 4_3:+47451956 | Msa0643940:CDS |
| ATTGATGGAGAGCGCACTCT+TGG | 0.494731 | 4_3:+47452037 | Msa0643940:CDS |
| GTCCTTAATCATGCAGATAA+CGG | 0.496263 | 4_3:+47451891 | Msa0643940:CDS |
| GAAGTACCAGTAAGTTCAGA+TGG | 0.500529 | 4_3:-47452860 | None:intergenic |
| CCAACCTTATCAAGTTCAGC+AGG | 0.503594 | 4_3:-47451642 | None:intergenic |
| TCAGAATCAATGAAGCGTCT+TGG | 0.503745 | 4_3:+47451918 | Msa0643940:CDS |
| CTACGAGAGCAGAATGCAAA+AGG | 0.503980 | 4_3:-47442788 | None:intergenic |
| ATATGCAATTCCAAGACTGT+TGG | 0.505910 | 4_3:-47447775 | None:intergenic |
| CTTTATGTGATTTATCCCCT+CGG | 0.509702 | 4_3:+47442241 | Msa0643940:CDS |
| GTTATAGGAACTATGTGGAA+AGG | 0.510269 | 4_3:+47445363 | Msa0643940:intron |
| CAGGTGAATGGCAAATGGTA+TGG | 0.510294 | 4_3:+47452758 | Msa0643940:CDS |
| CGTGGAGAGGAGATTGGTAA+AGG | 0.510370 | 4_3:+47452725 | Msa0643940:CDS |
| AATTGCACAAACTCAACTCT+CGG | 0.511635 | 4_3:+47441948 | Msa0643940:CDS |
| TCTACAGAATCCAACAGTCT+TGG | 0.513944 | 4_3:+47447765 | Msa0643940:CDS |
| GGAAAGGTACTTCAGGTGAA+TGG | 0.514463 | 4_3:+47452746 | Msa0643940:CDS |
| TGCAAGAATGATGATTGCTA+AGG | 0.515652 | 4_3:+47441757 | None:intergenic |
| GCTAGCAACACTGTGTTAAG+AGG | 0.515911 | 4_3:+47451792 | Msa0643940:CDS |
| TAATCTGTAAAAGCCCAATT+GGG | 0.517669 | 4_3:-47447077 | None:intergenic |
| TACTTCAGGTGAATGGCAAA+TGG | 0.520843 | 4_3:+47452753 | Msa0643940:CDS |
| ACTGTGCCATCTCAAATCAA+TGG | 0.521131 | 4_3:-47453238 | None:intergenic |
| ATTCCAGCGACGATCCTAGT+TGG | 0.521621 | 4_3:-47445442 | None:intergenic |
| CGACTTAAATAGGCAACATC+AGG | 0.524206 | 4_3:+47451752 | Msa0643940:CDS |
| CATTTCGTTTGTCGATCAAG+TGG | 0.525882 | 4_3:+47445823 | Msa0643940:CDS |
| TTATAGGAACTATGTGGAAA+GGG | 0.526730 | 4_3:+47445364 | Msa0643940:intron |
| TGAACTATCCTTAGATGTGC+GGG | 0.530384 | 4_3:-47452505 | None:intergenic |
| GAAGTCGTTCGTTGCAATGT+TGG | 0.530801 | 4_3:+47452677 | Msa0643940:CDS |
| CTGATAGAAGATACCCAATT+GGG | 0.530878 | 4_3:+47447064 | Msa0643940:CDS |
| ACCAAGATTGTTAGGTGAGT+CGG | 0.533268 | 4_3:-47452565 | None:intergenic |
| GCTCCTTAAACAATTTCTGC+TGG | 0.534039 | 4_3:-47443440 | None:intergenic |
| TATTCTTAGTACCTACAGAC+AGG | 0.535882 | 4_3:+47442641 | Msa0643940:CDS |
| TCTCAACCATTGATTTGAGA+TGG | 0.543527 | 4_3:+47453232 | Msa0643940:three_prime_UTR |
| ATGAGCTATATGCTGACAAA+GGG | 0.546731 | 4_3:+47452822 | Msa0643940:CDS |
| AGGTGCCATGAGAGTGTTGT+GGG | 0.547979 | 4_3:+47452907 | Msa0643940:CDS |
| TCAGTAGTAGTCGGATACCC+AGG | 0.548361 | 4_3:-47447045 | None:intergenic |
| ACTTCAAGATAGATTGAGCA+AGG | 0.548573 | 4_3:-47445399 | None:intergenic |
| AAGGTTGGTAACTTGAAGGA+AGG | 0.549942 | 4_3:+47451657 | Msa0643940:CDS |
| AAATGAGCCAGAGGATGAAA+AGG | 0.556321 | 4_3:+47452079 | Msa0643940:CDS |
| CAAATGGTATGGAAAGAGCT+TGG | 0.556811 | 4_3:+47452769 | Msa0643940:CDS |
| ATTTCTGCTGGCACAATGCG+TGG | 0.558642 | 4_3:-47443428 | None:intergenic |
| TACTGGTACTTCATTTGCAG+AGG | 0.561660 | 4_3:+47452871 | Msa0643940:CDS |
| TTTCCAACTAGGATCGTCGC+TGG | 0.566296 | 4_3:+47445439 | Msa0643940:CDS |
| TCAGAAAAGTTGTTTGTATG+GGG | 0.566815 | 4_3:-47453035 | None:intergenic |
| ATTTACTTCTTCTGGATCTG+GGG | 0.567838 | 4_3:+47451153 | Msa0643940:CDS |
| TGCAGCGTCACTTCAATCAT+GGG | 0.569446 | 4_3:+47452202 | Msa0643940:CDS |
| TGTTTGTATGGGGTAACTGC+TGG | 0.572866 | 4_3:-47453025 | None:intergenic |
| TTGAACTATCCTTAGATGTG+CGG | 0.573772 | 4_3:-47452506 | None:intergenic |
| CCTGCTGAACTTGATAAGGT+TGG | 0.575447 | 4_3:+47451642 | Msa0643940:CDS |
| GACCAACCTTCACAACGGCC+GGG | 0.578200 | 4_3:-47447886 | None:intergenic |
| TTTACTTCTTCTGGATCTGG+GGG | 0.579211 | 4_3:+47451154 | Msa0643940:CDS |
| AGAGGAGATTGGTAAAGGAA+AGG | 0.579728 | 4_3:+47452730 | Msa0643940:CDS |
| AATTCTGCATTTCCAAGCAT+AGG | 0.580960 | 4_3:+47451690 | Msa0643940:CDS |
| CGAATCCCACAACACTCTCA+TGG | 0.583467 | 4_3:-47452912 | None:intergenic |
| ATTGCACAAACTCAACTCTC+GGG | 0.583532 | 4_3:+47441949 | Msa0643940:CDS |
| TTTGGCTAAATCTGTTGCAG+TGG | 0.585669 | 4_3:+47445868 | Msa0643940:CDS |
| TATAATGAATGATAAAATGG+TGG | 0.586134 | 4_3:+47452133 | Msa0643940:CDS |
| TGAGCTCAAATGCTCAATGA+TGG | 0.592621 | 4_3:+47452962 | Msa0643940:exon |
| TATGAGCTATATGCTGACAA+AGG | 0.593936 | 4_3:+47452821 | Msa0643940:CDS |
| GATTGTAGTTGATGAAACTC+CGG | 0.594244 | 4_3:+47451944 | Msa0643940:CDS |
| AAATAAACTACTTGTTCAGA+CGG | 0.595027 | 4_3:-47443369 | None:intergenic |
| CGGGTGTGCAAGCAAAACAT+TGG | 0.597604 | 4_3:-47442865 | None:intergenic |
| CAATGTTGGTCAAAGTGCTG+TGG | 0.598962 | 4_3:+47452691 | Msa0643940:CDS |
| TCAGGTAGGAGGTAAAGGTA+TGG | 0.607656 | 4_3:+47451770 | Msa0643940:CDS |
| AAATGGTGGAATTGATGGAG+AGG | 0.608160 | 4_3:+47452147 | Msa0643940:CDS |
| TGATCAAATTTAGGAAGCCG+AGG | 0.610227 | 4_3:-47442258 | None:intergenic |
| TTGCTACAAAGATATTTCCA+TGG | 0.612546 | 4_3:+47443335 | Msa0643940:CDS |
| CCAGTAAGTTCAGATGGGAA+AGG | 0.612865 | 4_3:-47452854 | None:intergenic |
| AATGTGCGTGGAGAGGAGAT+TGG | 0.613773 | 4_3:+47452719 | Msa0643940:CDS |
| ATGGTATGGAAAGAGCTTGG+AGG | 0.613988 | 4_3:+47452772 | Msa0643940:CDS |
| TTTACTCTGCAGAAAGTGAG+AGG | 0.616492 | 4_3:+47448000 | Msa0643940:intron |
| ACTGAAGAAAACCTGTCTGT+AGG | 0.616578 | 4_3:-47442652 | None:intergenic |
| CAGTAGTAGTCGGATACCCA+GGG | 0.616928 | 4_3:-47447044 | None:intergenic |
| GATCAAATTTAGGAAGCCGA+GGG | 0.617132 | 4_3:-47442257 | None:intergenic |
| AATAGGCAACATCAGGTAGG+AGG | 0.620408 | 4_3:+47451759 | Msa0643940:CDS |
| ATCTAAACTTTGTGGTGATG+TGG | 0.622983 | 4_3:-47445846 | None:intergenic |
| TTGCAACGAACGACTTCTAG+AGG | 0.624222 | 4_3:-47452671 | None:intergenic |
| TATCTTCTATCAGTAGTAGT+CGG | 0.624223 | 4_3:-47447054 | None:intergenic |
| CTCTAATCTCTCAGAAACAG+AGG | 0.624773 | 4_3:+47447672 | Msa0643940:CDS |
| AAGTACCAGTAAGTTCAGAT+GGG | 0.624982 | 4_3:-47452859 | None:intergenic |
| GAATCCTAGTCACATTCAAG+TGG | 0.626822 | 4_3:-47441817 | None:intergenic |
| AGTGTTGTAGTGAGATGCAA+TGG | 0.635733 | 4_3:-47442153 | None:intergenic |
| AATGGTGGAATTGATGGAGA+GGG | 0.640387 | 4_3:+47452148 | Msa0643940:CDS |
| AAAGAGCTTGGAGGAATTAG+GGG | 0.650481 | 4_3:+47452781 | Msa0643940:CDS |
| TAAACTACTTGTTCAGACGG+AGG | 0.650699 | 4_3:-47443366 | None:intergenic |
| TTATGTGCATAAGAAGCAGA+AGG | 0.651924 | 4_3:-47447814 | None:intergenic |
| GCTCAGAAAGCTGAAACAAG+TGG | 0.656109 | 4_3:+47451837 | Msa0643940:CDS |
| TGTGGTAAATGATAAACTGG+TGG | 0.658273 | 4_3:+47452013 | Msa0643940:CDS |
| GCAGCTTACATCTATTAACA+GGG | 0.658572 | 4_3:+47442814 | Msa0643940:CDS |
| GAGATTAGAGGAACACCAAG+AGG | 0.666437 | 4_3:-47447659 | None:intergenic |
| TAATCTCTCAGAAACAGAGG+AGG | 0.671600 | 4_3:+47447675 | Msa0643940:CDS |
| TTAAATAGGCAACATCAGGT+AGG | 0.680186 | 4_3:+47451756 | Msa0643940:CDS |
| GCTGTGGTTGTAAATGTGCG+TGG | 0.686202 | 4_3:+47452707 | Msa0643940:CDS |
| AAGATTGTTAGGTGAGTCGG+AGG | 0.686542 | 4_3:-47452562 | None:intergenic |
| AGGAGTAAGAGATACAGACA+AGG | 0.687236 | 4_3:+47451812 | Msa0643940:CDS |
| CAAGGGACCAACCTTCACAA+CGG | 0.688319 | 4_3:-47447891 | None:intergenic |
| TCAGATGCGAAAGAAAACCC+AGG | 0.693289 | 4_3:-47448080 | None:intergenic |
| AATAATATCAGTCTCCCATG+CGG | 0.695522 | 4_3:+47447627 | Msa0643940:CDS |
| TATGCAGCGAAATGAGCCAG+AGG | 0.717046 | 4_3:+47452070 | Msa0643940:CDS |
| GGTTGTAAATGTGCGTGGAG+AGG | 0.717179 | 4_3:+47452712 | Msa0643940:CDS |
| GTGTTCAAACACGTGTTACG+TGG | 0.722374 | 4_3:+47442201 | Msa0643940:CDS |
| ATCAAATTTAGGAAGCCGAG+GGG | 0.724949 | 4_3:-47442256 | None:intergenic |
| TAGGTGCCATGAGAGTGTTG+TGG | 0.728876 | 4_3:+47452906 | Msa0643940:CDS |
| AAGGAAGAACCATCTCGCAG+CGG | 0.739935 | 4_3:+47441776 | Msa0643940:CDS |
CRISPR-GE
| badsite warning | sgRNA_sequence | Strand | Position | Region | GC_content |
|---|---|---|---|---|---|
| !!! | ATTTTTTTAATCCTTTTTAT+GGG | + | chr4_3:47443004-47443023 | Msa0643940:intron | 10.0% |
| !! | AAATTAATTATAAGGTTAAT+TGG | - | chr4_3:47444489-47444508 | None:intergenic | 10.0% |
| !! | AATAAATACAAAATAAATAC+AGG | + | chr4_3:47446128-47446147 | Msa0643940:intron | 10.0% |
| !! | TTAGAAAAAATATGAAAATA+TGG | - | chr4_3:47448960-47448979 | None:intergenic | 10.0% |
| !! | AAATATAAAAAAAAACAAGT+AGG | - | chr4_3:47451401-47451420 | None:intergenic | 10.0% |
| !!! | TTTTGAAAAAAATTCAAAAT+TGG | + | chr4_3:47453130-47453149 | Msa0643940:three_prime_UTR | 10.0% |
| !!! | CATTTTTTTAATCCTTTTTA+TGG | + | chr4_3:47443003-47443022 | Msa0643940:intron | 15.0% |
| !! | TAAATTTGTGTATCAAAATT+TGG | + | chr4_3:47443734-47443753 | Msa0643940:intron | 15.0% |
| !!! | TACTAACAAATAACTTTTAA+TGG | + | chr4_3:47443791-47443810 | Msa0643940:intron | 15.0% |
| !! | AACAAATCTTTAAATTACAA+AGG | + | chr4_3:47444395-47444414 | Msa0643940:intron | 15.0% |
| !!! | TTAACCTTATAATTAATTTG+AGG | + | chr4_3:47444490-47444509 | Msa0643940:intron | 15.0% |
| !!! | TTTTTTTGAATTAGATACTT+TGG | - | chr4_3:47444698-47444717 | None:intergenic | 15.0% |
| !! | AAAAATTAATTATCTCACTA+TGG | - | chr4_3:47445004-47445023 | None:intergenic | 15.0% |
| !! | TTAATATCATTCTACTTATT+TGG | + | chr4_3:47445275-47445294 | Msa0643940:intron | 15.0% |
| !!! | CTAAATGTATGTTTTATTTT+TGG | + | chr4_3:47445341-47445360 | Msa0643940:intron | 15.0% |
| !!! | TATGTTTTATTTTTGGTTAT+AGG | + | chr4_3:47445348-47445367 | Msa0643940:intron | 15.0% |
| !!! | CATAATTTGTTAAAATTAGA+AGG | + | chr4_3:47445550-47445569 | Msa0643940:intron | 15.0% |
| !! | ATTCAACAATAATGAAATAA+AGG | - | chr4_3:47446030-47446049 | None:intergenic | 15.0% |
| !! | TACAATTAAAAAAATATGGA+TGG | - | chr4_3:47446867-47446886 | None:intergenic | 15.0% |
| !! | GAACTACAATTAAAAAAATA+TGG | - | chr4_3:47446871-47446890 | None:intergenic | 15.0% |
| !! | TTATCATTATGTGAATATTA+AGG | + | chr4_3:47447173-47447192 | Msa0643940:intron | 15.0% |
| !! | TACATGAATCATTATATATT+TGG | - | chr4_3:47448375-47448394 | None:intergenic | 15.0% |
| !!! | AATTTAAATTTTATTCTAGC+AGG | - | chr4_3:47448430-47448449 | None:intergenic | 15.0% |
| !! | AATATTGAAAATACATAATG+TGG | + | chr4_3:47448704-47448723 | Msa0643940:intron | 15.0% |
| !! | TATCAAATCATTATCAATAA+TGG | - | chr4_3:47448792-47448811 | None:intergenic | 15.0% |
| !!! | GTTGTAAAATTTTAAATAAC+TGG | + | chr4_3:47450315-47450334 | Msa0643940:intron | 15.0% |
| !!! | TAAAATTTTAAATAACTGGT+AGG | + | chr4_3:47450319-47450338 | Msa0643940:intron | 15.0% |
| !! | GAAAATGAGAAATATTAAAA+GGG | + | chr4_3:47450551-47450570 | Msa0643940:intron | 15.0% |
| !! | AAAATGAGAAATATTAAAAG+GGG | + | chr4_3:47450552-47450571 | Msa0643940:intron | 15.0% |
| !!! | TTTTATTTGTTAGTCTTATA+AGG | + | chr4_3:47450688-47450707 | Msa0643940:intron | 15.0% |
| !! | GATATTAATTATATTTGCAT+CGG | - | chr4_3:47451439-47451458 | None:intergenic | 15.0% |
| !! | AATTAATATCAATCTATCTT+CGG | + | chr4_3:47451449-47451468 | Msa0643940:intron | 15.0% |
| !! | CTTTGATATTTAACATTTAA+AGG | - | chr4_3:47451487-47451506 | None:intergenic | 15.0% |
| !!! | AATTATCATATTGTGTTATT+TGG | + | chr4_3:47451509-47451528 | Msa0643940:intron | 15.0% |
| !! | AACTATAATGAATGATAAAA+TGG | + | chr4_3:47452130-47452149 | Msa0643940:CDS | 15.0% |
| !! | AATTAGTCAATATTAATTGT+CGG | - | chr4_3:47452267-47452286 | None:intergenic | 15.0% |
| !!! | TACATGATAATTTTACTTTA+GGG | - | chr4_3:47453204-47453223 | None:intergenic | 15.0% |
| !! | TTAATGTTAATAAGATCACA+AGG | - | chr4_3:47442300-47442319 | None:intergenic | 20.0% |
| !!! | TTGCTTTTATTTATGGAAAA+AGG | + | chr4_3:47442357-47442376 | Msa0643940:intron | 20.0% |
| !!! | TTTTCTAGATGATTTTAAAG+TGG | + | chr4_3:47442581-47442600 | Msa0643940:CDS | 20.0% |
| !! | TTAAATAGTTACCCATAAAA+AGG | - | chr4_3:47443018-47443037 | None:intergenic | 20.0% |
| !! | AAATGTGATGAACTATAAAA+AGG | + | chr4_3:47443056-47443075 | Msa0643940:intron | 20.0% |
| !! | AATGTGATGAACTATAAAAA+GGG | + | chr4_3:47443057-47443076 | Msa0643940:intron | 20.0% |
| !! | AAGAAAAATAATTAACTGAC+TGG | - | chr4_3:47443150-47443169 | None:intergenic | 20.0% |
| !!! | CAAATTTTTAAAGTCTAGTT+TGG | - | chr4_3:47443488-47443507 | None:intergenic | 20.0% |
| !!! | CAAACTAGACTTTAAAAATT+TGG | + | chr4_3:47443486-47443505 | Msa0643940:intron | 20.0% |
| !! | CAAAACATCAAATATGATTA+GGG | + | chr4_3:47443511-47443530 | Msa0643940:intron | 20.0% |
| !! | TATTATTCATAAGTTTGTCA+AGG | + | chr4_3:47443586-47443605 | Msa0643940:intron | 20.0% |
| !!! | TATGAAGATACAATTTTTGT+TGG | + | chr4_3:47443626-47443645 | Msa0643940:intron | 20.0% |
| !! | TACACAAATTTAAAGACATA+GGG | - | chr4_3:47443726-47443745 | None:intergenic | 20.0% |
| !! | ATACACAAATTTAAAGACAT+AGG | - | chr4_3:47443727-47443746 | None:intergenic | 20.0% |
| !!! | ACAAATAACTTTTAATGGAA+TGG | + | chr4_3:47443796-47443815 | Msa0643940:intron | 20.0% |
| !!! | AATGGAGTATAAAACAATTT+TGG | - | chr4_3:47443888-47443907 | None:intergenic | 20.0% |
| !! | AAGAGTTGAATAGTTTAAAA+TGG | + | chr4_3:47443952-47443971 | Msa0643940:intron | 20.0% |
| !! | TACGGAAAAATAATAATCTA+AGG | + | chr4_3:47444035-47444054 | Msa0643940:intron | 20.0% |
| !! | TAATTCTATATGTAACAAGT+TGG | - | chr4_3:47444156-47444175 | None:intergenic | 20.0% |
| !! | CTTGTTACATATAGAATTAA+AGG | + | chr4_3:47444157-47444176 | Msa0643940:intron | 20.0% |
| !! | AGAGAAAAAAAAATACTACA+GGG | - | chr4_3:47444229-47444248 | None:intergenic | 20.0% |
| !! | AAGAGAAAAAAAAATACTAC+AGG | - | chr4_3:47444230-47444249 | None:intergenic | 20.0% |
| !!! | AGTATTTTTTTTTCTCTTTC+CGG | + | chr4_3:47444232-47444251 | Msa0643940:intron | 20.0% |
| !! | AGATGAATGTTTAAATTACA+AGG | - | chr4_3:47444265-47444284 | None:intergenic | 20.0% |
| !!! | CTTTAATTTTGATTGCATAA+AGG | - | chr4_3:47444296-47444315 | None:intergenic | 20.0% |
| !! | AATCTTTAAATTACAAAGGT+TGG | + | chr4_3:47444399-47444418 | Msa0643940:intron | 20.0% |
| !! | ATCTAAACTAAATAAATCCT+AGG | + | chr4_3:47444423-47444442 | Msa0643940:intron | 20.0% |
| !! | TCTAAACTAAATAAATCCTA+GGG | + | chr4_3:47444424-47444443 | Msa0643940:intron | 20.0% |
| !!! | ATTAGAGCAATTTAATTTCA+TGG | - | chr4_3:47444763-47444782 | None:intergenic | 20.0% |
| !! | AGTAGATTAAATTCAAAATC+AGG | - | chr4_3:47445529-47445548 | None:intergenic | 20.0% |
| !! | GAAAGAAAAAAAAAAGAAAC+AGG | - | chr4_3:47445715-47445734 | None:intergenic | 20.0% |
| !! | AAATCAGTTATCTTTGTAAA+AGG | - | chr4_3:47446260-47446279 | None:intergenic | 20.0% |
| !! | ACAATCTATCTCAATATATT+TGG | + | chr4_3:47446376-47446395 | Msa0643940:intron | 20.0% |
| !!! | AATTGGCCTATAATAATATT+GGG | - | chr4_3:47446676-47446695 | None:intergenic | 20.0% |
| !!! | TAATTGGCCTATAATAATAT+TGG | - | chr4_3:47446677-47446696 | None:intergenic | 20.0% |
| !! | TTATAGGCCAATTATTAATA+TGG | + | chr4_3:47446683-47446702 | Msa0643940:intron | 20.0% |
| !!! | CTTACAATTGCTTTTTAATA+GGG | + | chr4_3:47446891-47446910 | Msa0643940:intron | 20.0% |
| !!! | TTACAATTGCTTTTTAATAG+GGG | + | chr4_3:47446892-47446911 | Msa0643940:intron | 20.0% |
| !!! | AGTATTTCCTATTCATATTT+TGG | + | chr4_3:47446956-47446975 | Msa0643940:intron | 20.0% |
| !! | TGTTTCTCAGAAAAAAAAAA+GGG | - | chr4_3:47447466-47447485 | None:intergenic | 20.0% |
| !!! | TTGTTTCTCAGAAAAAAAAA+AGG | - | chr4_3:47447467-47447486 | None:intergenic | 20.0% |
| !! | GATAAATGATAAATCATTTG+AGG | - | chr4_3:47447972-47447991 | None:intergenic | 20.0% |
| !!! | ATTTTTCCAAAGTTTTATTG+TGG | + | chr4_3:47448447-47448466 | Msa0643940:intron | 20.0% |
| !! | TGTTATATCATAAATGACAT+TGG | + | chr4_3:47448484-47448503 | Msa0643940:intron | 20.0% |
| !!! | TGATACAAAAAAAGTATGAA+CGG | - | chr4_3:47448647-47448666 | None:intergenic | 20.0% |
| !! | TCTAATACATATATCTAGTT+TGG | + | chr4_3:47448975-47448994 | Msa0643940:intron | 20.0% |
| !!! | CTAATACATATATCTAGTTT+GGG | + | chr4_3:47448976-47448995 | Msa0643940:intron | 20.0% |
| !!! | TGGTGTTAAAAAACAAAAAA+AGG | + | chr4_3:47449042-47449061 | Msa0643940:intron | 20.0% |
| !! | AAAAAACAAAAAAAGGAAGT+TGG | + | chr4_3:47449049-47449068 | Msa0643940:intron | 20.0% |
| !!! | AAATCAATTCTAGTTTTTGA+TGG | + | chr4_3:47449115-47449134 | Msa0643940:intron | 20.0% |
| !! | AACTGTTATCTATTTATGTT+AGG | + | chr4_3:47449545-47449564 | Msa0643940:intron | 20.0% |
| !! | TATTGTCACAATTGTATTAA+CGG | - | chr4_3:47449660-47449679 | None:intergenic | 20.0% |
| !!! | AAATAGAGTATCATTCAATT+AGG | - | chr4_3:47449694-47449713 | None:intergenic | 20.0% |
| !!! | TATAAATTTTTCCCTTTTTG+CGG | - | chr4_3:47450090-47450109 | None:intergenic | 20.0% |
| !! | AAATCAATTTGCAATAATGT+GGG | - | chr4_3:47450267-47450286 | None:intergenic | 20.0% |
| !! | TAAATCAATTTGCAATAATG+TGG | - | chr4_3:47450268-47450287 | None:intergenic | 20.0% |
| !! | GGAAAATGAGAAATATTAAA+AGG | + | chr4_3:47450550-47450569 | Msa0643940:intron | 20.0% |
| !! | AAATGAGAAATATTAAAAGG+GGG | + | chr4_3:47450553-47450572 | Msa0643940:intron | 20.0% |
| !! | AACAATTTAAAAAATGACAG+TGG | - | chr4_3:47450728-47450747 | None:intergenic | 20.0% |
| !!! | TTTTCAGAATAAAGTTTACA+TGG | + | chr4_3:47450849-47450868 | Msa0643940:intron | 20.0% |
| !!! | TCAAAATTTGACTTTATTGT+TGG | - | chr4_3:47450885-47450904 | None:intergenic | 20.0% |
| !! | TATACTTGCAAATTTATCTA+TGG | + | chr4_3:47450921-47450940 | Msa0643940:intron | 20.0% |
| !!! | GCATTTTTCAAATTTTAACA+AGG | - | chr4_3:47450985-47451004 | None:intergenic | 20.0% |
| !!! | ATAAAAAATTTAAGACCGAT+AGG | - | chr4_3:47451052-47451071 | None:intergenic | 20.0% |
| !! | ATATATTTCAAATTGTTTGC+AGG | + | chr4_3:47451104-47451123 | Msa0643940:intron | 20.0% |
| !! | TATATTTCAAATTGTTTGCA+GGG | + | chr4_3:47451105-47451124 | Msa0643940:intron | 20.0% |
| !!! | AATAAAGTTTGATTTCTTGT+AGG | + | chr4_3:47451572-47451591 | Msa0643940:intron | 20.0% |
| !! | TATAATGAATGATAAAATGG+TGG | + | chr4_3:47452133-47452152 | Msa0643940:CDS | 20.0% |
| !!! | TAGTTTGATAATGAATTTCT+AGG | + | chr4_3:47453169-47453188 | Msa0643940:three_prime_UTR | 20.0% |
| !!! | CTACATGATAATTTTACTTT+AGG | - | chr4_3:47453205-47453224 | None:intergenic | 20.0% |
| ! | TTCAAATCCTGTCATTAAAA+AGG | - | chr4_3:47441874-47441893 | None:intergenic | 25.0% |
| ! | CATCCTTTAGTAATCTATAA+AGG | - | chr4_3:47441976-47441995 | None:intergenic | 25.0% |
| !!! | TGCTTGTTTGCTTTTATTTA+TGG | + | chr4_3:47442350-47442369 | Msa0643940:intron | 25.0% |
| ! | ATCTATTGCCAATAACATAA+GGG | - | chr4_3:47442475-47442494 | None:intergenic | 25.0% |
| ! | TATCTATTGCCAATAACATA+AGG | - | chr4_3:47442476-47442495 | None:intergenic | 25.0% |
| !! | GTTTCTTCTTTATTCTGAAA+AGG | + | chr4_3:47443096-47443115 | Msa0643940:intron | 25.0% |
| ! | AAATAAACTACTTGTTCAGA+CGG | - | chr4_3:47443372-47443391 | None:intergenic | 25.0% |
| ! | GCAAAACATCAAATATGATT+AGG | + | chr4_3:47443510-47443529 | Msa0643940:intron | 25.0% |
| ! | TATTAAAAGCTCTGTTATAC+AGG | + | chr4_3:47443843-47443862 | Msa0643940:intron | 25.0% |
| ! | AGAAAAAAAAATACTACAGG+GGG | - | chr4_3:47444227-47444246 | None:intergenic | 25.0% |
| ! | GAGAAAAAAAAATACTACAG+GGG | - | chr4_3:47444228-47444247 | None:intergenic | 25.0% |
| ! | GAATGTTTAAATTACAAGGA+TGG | - | chr4_3:47444261-47444280 | None:intergenic | 25.0% |
| ! | ATCAGAGAAAATATCATTTG+AGG | - | chr4_3:47444586-47444605 | None:intergenic | 25.0% |
| ! | TATTCAGATAATAATTGAGC+AGG | - | chr4_3:47444829-47444848 | None:intergenic | 25.0% |
| ! | GGATCTTAAGGTATATTAAA+AGG | - | chr4_3:47444906-47444925 | None:intergenic | 25.0% |
| ! | AAAATATGTTCTTGACATCT+TGG | - | chr4_3:47445144-47445163 | None:intergenic | 25.0% |
| !!! | GCAAACATTGTTATTTCTAA+GGG | - | chr4_3:47445167-47445186 | None:intergenic | 25.0% |
| ! | TATCATTCTACTTATTTGGT+TGG | + | chr4_3:47445279-47445298 | Msa0643940:intron | 25.0% |
| ! | TTCACATATGCATGTAAAAA+GGG | - | chr4_3:47445321-47445340 | None:intergenic | 25.0% |
| ! | TAAAATTAGAAGGTAAGTCT+TGG | + | chr4_3:47445560-47445579 | Msa0643940:intron | 25.0% |
| ! | ATATGCATCATTTGGAAAAA+GGG | - | chr4_3:47445739-47445758 | None:intergenic | 25.0% |
| ! | AATATGCATCATTTGGAAAA+AGG | - | chr4_3:47445740-47445759 | None:intergenic | 25.0% |
| ! | CATTCATAATATGCATCATT+TGG | - | chr4_3:47445747-47445766 | None:intergenic | 25.0% |
| ! | CAATAATGAAATAAAGGTTG+AGG | - | chr4_3:47446024-47446043 | None:intergenic | 25.0% |
| !!! | CATTGTAGTCGATTTTATAT+AGG | + | chr4_3:47446097-47446116 | Msa0643940:intron | 25.0% |
| !!! | TTACAAAGATAACTGATTTG+AGG | + | chr4_3:47446261-47446280 | Msa0643940:intron | 25.0% |
| ! | GATAGACCCAATATTATTAT+AGG | + | chr4_3:47446667-47446686 | Msa0643940:intron | 25.0% |
| ! | AGTAACATAATGGCTTATTT+AGG | + | chr4_3:47446715-47446734 | Msa0643940:intron | 25.0% |
| ! | GTAACATAATGGCTTATTTA+GGG | + | chr4_3:47446716-47446735 | Msa0643940:intron | 25.0% |
| ! | TAACATAATGGCTTATTTAG+GGG | + | chr4_3:47446717-47446736 | Msa0643940:intron | 25.0% |
| ! | CCTATTAAAAAGCAATTGTA+AGG | - | chr4_3:47446893-47446912 | None:intergenic | 25.0% |
| !!! | CCTTACAATTGCTTTTTAAT+AGG | + | chr4_3:47446890-47446909 | Msa0643940:intron | 25.0% |
| ! | TTAGGAACCAAAATATGAAT+AGG | - | chr4_3:47446966-47446985 | None:intergenic | 25.0% |
| ! | TCATCAAAACAATAACTGTT+AGG | - | chr4_3:47446984-47447003 | None:intergenic | 25.0% |
| !!! | AGTTATTGTTTTGATGATTC+AGG | + | chr4_3:47446987-47447006 | Msa0643940:intron | 25.0% |
| !!! | AATATTAAGGATAACTTGCT+TGG | + | chr4_3:47447186-47447205 | Msa0643940:intron | 25.0% |
| ! | TTCAGCTTTACAAATTTGAT+TGG | + | chr4_3:47447566-47447585 | Msa0643940:intron | 25.0% |
| ! | TATGATTTATTTGCTTCAGT+TGG | + | chr4_3:47447712-47447731 | Msa0643940:CDS | 25.0% |
| ! | TTTGGATAATAGTTCATCAA+TGG | + | chr4_3:47447741-47447760 | Msa0643940:CDS | 25.0% |
| !!! | TTTTAGAACAATCATTACGT+AGG | - | chr4_3:47448136-47448155 | None:intergenic | 25.0% |
| !! | TACAAGTAACTTTCTTTTGT+AGG | + | chr4_3:47448194-47448213 | Msa0643940:intron | 25.0% |
| !! | AATTTTATTCTAGCAGGATA+AGG | - | chr4_3:47448424-47448443 | None:intergenic | 25.0% |
| !! | CATTTTCCACAATAAAACTT+TGG | - | chr4_3:47448456-47448475 | None:intergenic | 25.0% |
| !!! | CAAAGTTTTATTGTGGAAAA+TGG | + | chr4_3:47448454-47448473 | Msa0643940:intron | 25.0% |
| !! | TTTGATACTGACTAATATTC+TGG | + | chr4_3:47448805-47448824 | Msa0643940:intron | 25.0% |
| !!! | AGTTTTGTTTTCTGATTCTA+AGG | + | chr4_3:47448925-47448944 | Msa0643940:intron | 25.0% |
| ! | AATTCATCTTCTTTGATTGT+TGG | - | chr4_3:47449354-47449373 | None:intergenic | 25.0% |
| ! | TTATCTATTTATGTTAGGAG+AGG | + | chr4_3:47449550-47449569 | Msa0643940:intron | 25.0% |
| ! | CTAATCAATCCAAAGATTAA+GGG | + | chr4_3:47449606-47449625 | Msa0643940:intron | 25.0% |
| ! | ATTGTCACAATTGTATTAAC+GGG | - | chr4_3:47449659-47449678 | None:intergenic | 25.0% |
| !!! | CAACAATATTTTAGAACACA+TGG | + | chr4_3:47449724-47449743 | Msa0643940:intron | 25.0% |
| ! | ATTTGTAATCATAGGAAATG+AGG | + | chr4_3:47449763-47449782 | Msa0643940:intron | 25.0% |
| !! | GTCTGAATCATGAATTTTAA+TGG | - | chr4_3:47450196-47450215 | None:intergenic | 25.0% |
| ! | ATTCGATATTGACATTGAAA+TGG | - | chr4_3:47450782-47450801 | None:intergenic | 25.0% |
| ! | AATTTGAGGAATCATTATCA+TGG | + | chr4_3:47451293-47451312 | Msa0643940:intron | 25.0% |
| ! | ATTTGAGGAATCATTATCAT+GGG | + | chr4_3:47451294-47451313 | Msa0643940:intron | 25.0% |
| !!! | ATTGTGTTATTTGGTTACTT+AGG | + | chr4_3:47451518-47451537 | Msa0643940:intron | 25.0% |
| ! | AACCTCTACAAAAGAAAAAA+AGG | + | chr4_3:47452105-47452124 | Msa0643940:CDS | 25.0% |
| !!! | TTCCTTTTTTTCTTTTGTAG+AGG | - | chr4_3:47452110-47452129 | None:intergenic | 25.0% |
| ! | TTTAGCTGAATTTACATACA+TGG | - | chr4_3:47452244-47452263 | None:intergenic | 25.0% |
| ! | AAATACTTAAAGTGAGAAGA+AGG | - | chr4_3:47452376-47452395 | None:intergenic | 25.0% |
| ! | TTCAGAAAAGTTGTTTGTAT+GGG | - | chr4_3:47453039-47453058 | None:intergenic | 25.0% |
| ! | TTTCAGAAAAGTTGTTTGTA+TGG | - | chr4_3:47453040-47453059 | None:intergenic | 25.0% |
| AATCCTGTCATTAAAAAGGT+TGG | - | chr4_3:47441870-47441889 | None:intergenic | 30.0% | |
| CATCTGTTCAAGCAAATAAA+TGG | - | chr4_3:47441903-47441922 | None:intergenic | 30.0% | |
| GGACCTTTATAGATTACTAA+AGG | + | chr4_3:47441970-47441989 | Msa0643940:CDS | 30.0% | |
| TATAGATTACTAAAGGATGC+TGG | + | chr4_3:47441977-47441996 | Msa0643940:CDS | 30.0% | |
| TTTGTGTACACAGATTGATA+TGG | + | chr4_3:47442110-47442129 | Msa0643940:intron | 30.0% | |
| ! | TAATTGCATTTTGCTTCTTG+TGG | + | chr4_3:47442317-47442336 | Msa0643940:intron | 30.0% |
| !!! | TCTAGATGATTTTAAAGTGG+TGG | + | chr4_3:47442584-47442603 | Msa0643940:CDS | 30.0% |
| AGATAAACAGTACAGAACTA+GGG | - | chr4_3:47442716-47442735 | None:intergenic | 30.0% | |
| ! | GAACTATAAAAAGGGACTTT+TGG | + | chr4_3:47443065-47443084 | Msa0643940:intron | 30.0% |
| ! | TTCTGAAAAGGACATAATAC+CGG | + | chr4_3:47443108-47443127 | Msa0643940:intron | 30.0% |
| TGGAAAACAATTCTATATGC+CGG | - | chr4_3:47443130-47443149 | None:intergenic | 30.0% | |
| ATTATGAACCTTTCTGTGAT+AGG | + | chr4_3:47443239-47443258 | Msa0643940:intron | 30.0% | |
| ! | GTGATAGGTTGACATATTTA+TGG | + | chr4_3:47443254-47443273 | Msa0643940:intron | 30.0% |
| ! | ATATTTATGGATGCAGCTTT+TGG | + | chr4_3:47443267-47443286 | Msa0643940:CDS | 30.0% |
| ! | TATTTATGGATGCAGCTTTT+GGG | + | chr4_3:47443268-47443287 | Msa0643940:CDS | 30.0% |
| TTGCTACAAAGATATTTCCA+TGG | + | chr4_3:47443335-47443354 | Msa0643940:CDS | 30.0% | |
| AAAAATAAGCCAATCCAAAC+AGG | - | chr4_3:47443537-47443556 | None:intergenic | 30.0% | |
| TCATGAGCTCAAAAATAAAC+AGG | + | chr4_3:47443700-47443719 | Msa0643940:intron | 30.0% | |
| ! | AGAGCTTTTAATAATCCAAC+CGG | - | chr4_3:47443836-47443855 | None:intergenic | 30.0% |
| TCATCTAGTATTACACAACA+GGG | + | chr4_3:47443975-47443994 | Msa0643940:intron | 30.0% | |
| AGAGAGAATCTCTCAAAATA+CGG | + | chr4_3:47444017-47444036 | Msa0643940:intron | 30.0% | |
| ATATATATGCTCCAACTTGA+GGG | - | chr4_3:47444124-47444143 | None:intergenic | 30.0% | |
| ! | TAAACTGGAATTTGCTCAAA+TGG | - | chr4_3:47444204-47444223 | None:intergenic | 30.0% |
| TAAATTACAAGGATGGAATC+CGG | - | chr4_3:47444254-47444273 | None:intergenic | 30.0% | |
| CATTTAGGCGAATTTCTTTA+AGG | + | chr4_3:47444363-47444382 | Msa0643940:intron | 30.0% | |
| AAACTAAATAAATCCTAGGG+AGG | + | chr4_3:47444427-47444446 | Msa0643940:intron | 30.0% | |
| GGGACCTCAAATTAATTATA+AGG | - | chr4_3:47444497-47444516 | None:intergenic | 30.0% | |
| !! | TAGAGATTTGGTGAAGATAT+TGG | + | chr4_3:47444519-47444538 | Msa0643940:intron | 30.0% |
| ! | ATGTTTTCTCTCATGAAAGA+CGG | + | chr4_3:47444627-47444646 | Msa0643940:intron | 30.0% |
| !! | TGGTTTGTTTATACAGAATG+AGG | - | chr4_3:47444871-47444890 | None:intergenic | 30.0% |
| GTATAAACAAACCATTTCCT+AGG | + | chr4_3:47444877-47444896 | Msa0643940:intron | 30.0% | |
| TTCCTACTAATCTCTTGTAT+CGG | + | chr4_3:47445022-47445041 | Msa0643940:intron | 30.0% | |
| TGAAACTTCTACCAAATAAG+GGG | - | chr4_3:47445068-47445087 | None:intergenic | 30.0% | |
| GTGAAACTTCTACCAAATAA+GGG | - | chr4_3:47445069-47445088 | None:intergenic | 30.0% | |
| TGTGAAACTTCTACCAAATA+AGG | - | chr4_3:47445070-47445089 | None:intergenic | 30.0% | |
| TTTGGTAGAAGTTTCACATT+AGG | + | chr4_3:47445072-47445091 | Msa0643940:intron | 30.0% | |
| TAAATCAGTTTATGCTCCTA+TGG | - | chr4_3:47445100-47445119 | None:intergenic | 30.0% | |
| ! | GCATAAACTGATTTACAATC+AGG | + | chr4_3:47445105-47445124 | Msa0643940:intron | 30.0% |
| !! | GGCAAACATTGTTATTTCTA+AGG | - | chr4_3:47445168-47445187 | None:intergenic | 30.0% |
| AGTTCATCAAATGAAGTAGT+TGG | - | chr4_3:47445214-47445233 | None:intergenic | 30.0% | |
| GTTCACATATGCATGTAAAA+AGG | - | chr4_3:47445322-47445341 | None:intergenic | 30.0% | |
| !! | TTTTGGTTATAGGAACTATG+TGG | + | chr4_3:47445358-47445377 | Msa0643940:intron | 30.0% |
| TTATAGGAACTATGTGGAAA+GGG | + | chr4_3:47445364-47445383 | Msa0643940:intron | 30.0% | |
| ! | TTGAATCATCTTTTCCAACT+AGG | + | chr4_3:47445428-47445447 | Msa0643940:CDS | 30.0% |
| ! | ACTCACAATGGATAGAATTT+TGG | - | chr4_3:47445482-47445501 | None:intergenic | 30.0% |
| ! | ATTTTTCACATGACTCACAA+TGG | - | chr4_3:47445494-47445513 | None:intergenic | 30.0% |
| TATGCATCATTTGGAAAAAG+GGG | - | chr4_3:47445738-47445757 | None:intergenic | 30.0% | |
| ATCACCACAAAGTTTAGATT+TGG | + | chr4_3:47445850-47445869 | Msa0643940:CDS | 30.0% | |
| TTAGCCAAATCTAAACTTTG+TGG | - | chr4_3:47445857-47445876 | None:intergenic | 30.0% | |
| TAGAGACTGTTATCTTTAAC+GGG | - | chr4_3:47445921-47445940 | None:intergenic | 30.0% | |
| CTAGAGACTGTTATCTTTAA+CGG | - | chr4_3:47445922-47445941 | None:intergenic | 30.0% | |
| !! | TGTGTGATTTTGATGATAGT+TGG | + | chr4_3:47445946-47445965 | Msa0643940:intron | 30.0% |
| !!! | ATTTTGATGATAGTTGGTGA+TGG | + | chr4_3:47445952-47445971 | Msa0643940:intron | 30.0% |
| !!! | TTTTGATGATAGTTGGTGAT+GGG | + | chr4_3:47445953-47445972 | Msa0643940:intron | 30.0% |
| TGTTGAATGAGAGAAAATAG+AGG | + | chr4_3:47446042-47446061 | Msa0643940:intron | 30.0% | |
| !! | GTCGATTTTATATAGGCTTA+TGG | + | chr4_3:47446104-47446123 | Msa0643940:intron | 30.0% |
| AGTTATCTTTGTAAAAGGCT+GGG | - | chr4_3:47446255-47446274 | None:intergenic | 30.0% | |
| AATCGACTATAATGATCAAC+TGG | - | chr4_3:47446316-47446335 | None:intergenic | 30.0% | |
| TTATCACATATTACCGTCAT+TGG | + | chr4_3:47446446-47446465 | Msa0643940:intron | 30.0% | |
| GTAATTCTTCTATATGCACT+GGG | + | chr4_3:47446552-47446571 | Msa0643940:intron | 30.0% | |
| TAGGCCAATTATTAATATGG+TGG | + | chr4_3:47446686-47446705 | Msa0643940:intron | 30.0% | |
| AGGCCAATTATTAATATGGT+GGG | + | chr4_3:47446687-47446706 | Msa0643940:intron | 30.0% | |
| ! | TTAATAGGGGTTTATTTCTC+TGG | + | chr4_3:47446905-47446924 | Msa0643940:intron | 30.0% |
| !!! | TGTTTTGATGATTCAGGTTT+TGG | + | chr4_3:47446993-47447012 | Msa0643940:intron | 30.0% |
| TATCTTCTATCAGTAGTAGT+CGG | - | chr4_3:47447057-47447076 | None:intergenic | 30.0% | |
| TAATCTGTAAAAGCCCAATT+GGG | - | chr4_3:47447080-47447099 | None:intergenic | 30.0% | |
| TTAATCTGTAAAAGCCCAAT+TGG | - | chr4_3:47447081-47447100 | None:intergenic | 30.0% | |
| ACCAACAAAATTCATTTCAG+AGG | - | chr4_3:47447237-47447256 | None:intergenic | 30.0% | |
| GTCATCAATCAGAAAAATCA+AGG | - | chr4_3:47447502-47447521 | None:intergenic | 30.0% | |
| ATTTATTTGCTTCAGTTGGA+TGG | + | chr4_3:47447716-47447735 | Msa0643940:CDS | 30.0% | |
| TAGTAAACATTAGTAAGCGT+TGG | - | chr4_3:47447917-47447936 | None:intergenic | 30.0% | |
| ATTTAGATAGATCCATTTGC+AGG | - | chr4_3:47448055-47448074 | None:intergenic | 30.0% | |
| GAAAGTTACTTGTAAGTAGT+AGG | - | chr4_3:47448188-47448207 | None:intergenic | 30.0% | |
| TTACAAAGAGAACGAAAAGA+GGG | - | chr4_3:47448298-47448317 | None:intergenic | 30.0% | |
| ATTACAAAGAGAACGAAAAG+AGG | - | chr4_3:47448299-47448318 | None:intergenic | 30.0% | |
| TTTACTGTAGTAGCCTAATA+TGG | + | chr4_3:47448320-47448339 | Msa0643940:intron | 30.0% | |
| TGATTCATGTATTATCAGCA+TGG | + | chr4_3:47448384-47448403 | Msa0643940:intron | 30.0% | |
| ! | TATTATCAGCATGGTGTTAA+TGG | + | chr4_3:47448393-47448412 | Msa0643940:intron | 30.0% |
| GTTACCTAGTAAATGTTGTT+TGG | + | chr4_3:47448570-47448589 | Msa0643940:intron | 30.0% | |
| ! | AATGTTGTTTGGTAGGAAAA+AGG | + | chr4_3:47448581-47448600 | Msa0643940:intron | 30.0% |
| AAGAACTTTGAATATGACAG+CGG | + | chr4_3:47448762-47448781 | Msa0643940:intron | 30.0% | |
| AACAGAGAAGAAAAACAGAA+AGG | - | chr4_3:47448902-47448921 | None:intergenic | 30.0% | |
| ! | TTTTAACACCAAAAACGACA+AGG | - | chr4_3:47449033-47449052 | None:intergenic | 30.0% |
| GCAATTTAAGCTATAGTACA+GGG | + | chr4_3:47449322-47449341 | Msa0643940:intron | 30.0% | |
| CTCGATGTATCTTATTACAA+CGG | - | chr4_3:47449381-47449400 | None:intergenic | 30.0% | |
| TTTGTTAATATGTCACCTTG+AGG | + | chr4_3:47449432-47449451 | Msa0643940:intron | 30.0% | |
| CCTTAATCTTTGGATTGATT+AGG | - | chr4_3:47449608-47449627 | None:intergenic | 30.0% | |
| CCTAATCAATCCAAAGATTA+AGG | + | chr4_3:47449605-47449624 | Msa0643940:intron | 30.0% | |
| TTGATTCTTCCCTTAATCTT+TGG | - | chr4_3:47449618-47449637 | None:intergenic | 30.0% | |
| ! | TTTAGAACACATGGAAGATT+CGG | + | chr4_3:47449733-47449752 | Msa0643940:intron | 30.0% |
| !! | GAATATTTTGGATAAGGTCT+GGG | + | chr4_3:47449821-47449840 | Msa0643940:intron | 30.0% |
| ! | TAATTTGTCTATCCGCAAAA+AGG | + | chr4_3:47450075-47450094 | Msa0643940:intron | 30.0% |
| AATTTGTCTATCCGCAAAAA+GGG | + | chr4_3:47450076-47450095 | Msa0643940:intron | 30.0% | |
| TATGAATTGACCCATGAATA+AGG | + | chr4_3:47450374-47450393 | Msa0643940:intron | 30.0% | |
| ATGAATTGACCCATGAATAA+GGG | + | chr4_3:47450375-47450394 | Msa0643940:intron | 30.0% | |
| ATGATCAAGCAAATTGTGAA+CGG | + | chr4_3:47450593-47450612 | Msa0643940:intron | 30.0% | |
| TTTAAAAAATGACAGTGGCA+TGG | - | chr4_3:47450723-47450742 | None:intergenic | 30.0% | |
| TCAATGTCAATATCGAATTC+TGG | + | chr4_3:47450784-47450803 | Msa0643940:intron | 30.0% | |
| TCAGAATAAAGTTTACATGG+TGG | + | chr4_3:47450852-47450871 | Msa0643940:intron | 30.0% | |
| CAGAATAAAGTTTACATGGT+GGG | + | chr4_3:47450853-47450872 | Msa0643940:intron | 30.0% | |
| AGAATAAAGTTTACATGGTG+GGG | + | chr4_3:47450854-47450873 | Msa0643940:intron | 30.0% | |
| TCTAACACATTCTTTCCTAT+CGG | + | chr4_3:47451034-47451053 | Msa0643940:intron | 30.0% | |
| CAAACACTATTTACTTCTTC+TGG | + | chr4_3:47451145-47451164 | Msa0643940:CDS | 30.0% | |
| TATTTACTTCTTCTGGATCT+GGG | + | chr4_3:47451152-47451171 | Msa0643940:CDS | 30.0% | |
| ! | AAAGTTTGATTTCTTGTAGG+AGG | + | chr4_3:47451575-47451594 | Msa0643940:intron | 30.0% |
| AGAGTTGAAAACACAAATCT+TGG | + | chr4_3:47451726-47451745 | Msa0643940:CDS | 30.0% | |
| ! | TTTCGTTTTCTCTTTTGTAG+AGG | - | chr4_3:47451987-47452006 | None:intergenic | 30.0% |
| AACTGTGGTAAATGATAAAC+TGG | + | chr4_3:47452010-47452029 | Msa0643940:CDS | 30.0% | |
| ! | TGATAAAATGGTGGAATTGA+TGG | + | chr4_3:47452142-47452161 | Msa0643940:CDS | 30.0% |
| AAGTATTTATTTGCAGCTTC+CGG | + | chr4_3:47452388-47452407 | Msa0643940:intron | 30.0% | |
| AATTTCATCTCTGCTATATC+AGG | + | chr4_3:47452457-47452476 | Msa0643940:intron | 30.0% | |
| AATCTCACGAAAATAACTTC+TGG | + | chr4_3:47452605-47452624 | Msa0643940:intron | 30.0% | |
| TCAGAAAAGTTGTTTGTATG+GGG | - | chr4_3:47453038-47453057 | None:intergenic | 30.0% | |
| !! | GTCATTAAAAAGGTTGGTGT+CGG | - | chr4_3:47441864-47441883 | None:intergenic | 35.0% |
| ! | ACACCAACCTTTTTAATGAC+AGG | + | chr4_3:47441864-47441883 | Msa0643940:intron | 35.0% |
| AATTGCACAAACTCAACTCT+CGG | + | chr4_3:47441948-47441967 | Msa0643940:CDS | 35.0% | |
| ! | TTTTCCAGTAAGGTAGTCAA+CGG | - | chr4_3:47442011-47442030 | None:intergenic | 35.0% |
| CTTTATGTGATTTATCCCCT+CGG | + | chr4_3:47442241-47442260 | Msa0643940:CDS | 35.0% | |
| ATAACATAAGGGTCAGTTGA+TGG | - | chr4_3:47442464-47442483 | None:intergenic | 35.0% | |
| TCAACTGACCCTTATGTTAT+TGG | + | chr4_3:47442464-47442483 | Msa0643940:intron | 35.0% | |
| TAGATTCTGATTTCTGCATG+TGG | + | chr4_3:47442543-47442562 | Msa0643940:intron | 35.0% | |
| TATTCTTAGTACCTACAGAC+AGG | + | chr4_3:47442641-47442660 | Msa0643940:CDS | 35.0% | |
| CAGATAAACAGTACAGAACT+AGG | - | chr4_3:47442717-47442736 | None:intergenic | 35.0% | |
| AGCAGCTTACATCTATTAAC+AGG | + | chr4_3:47442813-47442832 | Msa0643940:CDS | 35.0% | |
| GCAGCTTACATCTATTAACA+GGG | + | chr4_3:47442814-47442833 | Msa0643940:CDS | 35.0% | |
| GCAAAACATTGGCAATATCT+TGG | - | chr4_3:47442857-47442876 | None:intergenic | 35.0% | |
| TACAAGTGAACTTGTACCTT+CGG | - | chr4_3:47442888-47442907 | None:intergenic | 35.0% | |
| ! | TGTCTAATGGACACTAACAA+TGG | - | chr4_3:47442942-47442961 | None:intergenic | 35.0% |
| TTGTTAGTGTCCATTAGACA+TGG | + | chr4_3:47442942-47442961 | Msa0643940:intron | 35.0% | |
| TATGTCAACCTATCACAGAA+AGG | - | chr4_3:47443250-47443269 | None:intergenic | 35.0% | |
| GGAAAACCTTATTATTGAGC+AGG | - | chr4_3:47443467-47443486 | None:intergenic | 35.0% | |
| AAATATGATTAGGGCCTGTT+TGG | + | chr4_3:47443520-47443539 | Msa0643940:intron | 35.0% | |
| ! | GAGCTTTTAATAATCCAACC+GGG | - | chr4_3:47443835-47443854 | None:intergenic | 35.0% |
| ! | GCAGTAGTTGGTATATCTAA+TGG | - | chr4_3:47443906-47443925 | None:intergenic | 35.0% |
| CATATTAGAAGAGCAGTAGT+TGG | - | chr4_3:47443918-47443937 | None:intergenic | 35.0% | |
| GTCATCTAGTATTACACAAC+AGG | + | chr4_3:47443974-47443993 | Msa0643940:intron | 35.0% | |
| CATCTAGTATTACACAACAG+GGG | + | chr4_3:47443976-47443995 | Msa0643940:intron | 35.0% | |
| TATATATGCTCCAACTTGAG+GGG | - | chr4_3:47444123-47444142 | None:intergenic | 35.0% | |
| GATATATATGCTCCAACTTG+AGG | - | chr4_3:47444125-47444144 | None:intergenic | 35.0% | |
| AAGAAATTCGCCTAAATGTC+AGG | - | chr4_3:47444361-47444380 | None:intergenic | 35.0% | |
| TAAACCGGAATTCACTCAAA+TGG | + | chr4_3:47444450-47444469 | Msa0643940:intron | 35.0% | |
| ATCTTCACCAAATCTCTACA+GGG | - | chr4_3:47444517-47444536 | None:intergenic | 35.0% | |
| TATCTTCACCAAATCTCTAC+AGG | - | chr4_3:47444518-47444537 | None:intergenic | 35.0% | |
| ! | AGAAGCAAATTGTTGTTGCA+AGG | - | chr4_3:47444733-47444752 | None:intergenic | 35.0% |
| TGAGGTAACAGCAATATTGT+TGG | - | chr4_3:47444853-47444872 | None:intergenic | 35.0% | |
| TAAACAAACCATTTCCTAGG+TGG | + | chr4_3:47444880-47444899 | Msa0643940:intron | 35.0% | |
| TTGCGAGTCAATTTCTAAAC+GGG | - | chr4_3:47444960-47444979 | None:intergenic | 35.0% | |
| GTTGCGAGTCAATTTCTAAA+CGG | - | chr4_3:47444961-47444980 | None:intergenic | 35.0% | |
| TACCGATACAAGAGATTAGT+AGG | - | chr4_3:47445027-47445046 | None:intergenic | 35.0% | |
| AGTTTCACATTAGGTTCCAT+AGG | + | chr4_3:47445081-47445100 | Msa0643940:intron | 35.0% | |
| ATATGTTCTTGACATCTTGG+AGG | - | chr4_3:47445141-47445160 | None:intergenic | 35.0% | |
| GTTATAGGAACTATGTGGAA+AGG | + | chr4_3:47445363-47445382 | Msa0643940:intron | 35.0% | |
| ACTTCAAGATAGATTGAGCA+AGG | - | chr4_3:47445402-47445421 | None:intergenic | 35.0% | |
| ATGCATCATTTGGAAAAAGG+GGG | - | chr4_3:47445737-47445756 | None:intergenic | 35.0% | |
| ! | ATCTAAACTTTGTGGTGATG+TGG | - | chr4_3:47445849-47445868 | None:intergenic | 35.0% |
| AGAGACTGTTATCTTTAACG+GGG | - | chr4_3:47445920-47445939 | None:intergenic | 35.0% | |
| CATATATAAGCTCCAGCTTA+AGG | - | chr4_3:47446230-47446249 | None:intergenic | 35.0% | |
| CAGTTATCTTTGTAAAAGGC+TGG | - | chr4_3:47446256-47446275 | None:intergenic | 35.0% | |
| TCATTTCATCAGATAGCATC+AGG | - | chr4_3:47446357-47446376 | None:intergenic | 35.0% | |
| CAATATATTTGGTCCTCTCA+TGG | + | chr4_3:47446387-47446406 | Msa0643940:intron | 35.0% | |
| ! | CTAATCATGTTTTCCATGAG+AGG | - | chr4_3:47446403-47446422 | None:intergenic | 35.0% |
| CTCATGGAAAACATGATTAG+AGG | + | chr4_3:47446403-47446422 | Msa0643940:intron | 35.0% | |
| TGATTAGAGGCAATATGCAA+TGG | + | chr4_3:47446416-47446435 | Msa0643940:intron | 35.0% | |
| ! | TAGTGACTTGTGAGCTTATT+TGG | - | chr4_3:47446514-47446533 | None:intergenic | 35.0% |
| ATAAGCTCACAAGTCACTAA+TGG | + | chr4_3:47446515-47446534 | Msa0643940:intron | 35.0% | |
| GGTAATTCTTCTATATGCAC+TGG | + | chr4_3:47446551-47446570 | Msa0643940:intron | 35.0% | |
| GGGTCATTATACTTCAAAAC+TGG | + | chr4_3:47446572-47446591 | Msa0643940:intron | 35.0% | |
| ! | AGTGAATTTGTTTCACCTTG+AGG | + | chr4_3:47446612-47446631 | Msa0643940:intron | 35.0% |
| GGCCAATTATTAATATGGTG+GGG | + | chr4_3:47446688-47446707 | Msa0643940:intron | 35.0% | |
| CTCCCCACCATATTAATAAT+TGG | - | chr4_3:47446693-47446712 | None:intergenic | 35.0% | |
| ! | CAATTATTAATATGGTGGGG+AGG | + | chr4_3:47446691-47446710 | Msa0643940:intron | 35.0% |
| AAGAATGATGTGGGAAATTG+CGG | + | chr4_3:47446767-47446786 | Msa0643940:intron | 35.0% | |
| ACTGATAGAAGATACCCAAT+TGG | + | chr4_3:47447063-47447082 | Msa0643940:CDS | 35.0% | |
| CTGATAGAAGATACCCAATT+GGG | + | chr4_3:47447064-47447083 | Msa0643940:CDS | 35.0% | |
| !!! | GCCTCTGAAATGAATTTTGT+TGG | + | chr4_3:47447233-47447252 | Msa0643940:intron | 35.0% |
| ! | TTCTTCTGAGAAACAATCAG+AGG | + | chr4_3:47447270-47447289 | Msa0643940:intron | 35.0% |
| ! | TCTTCTGAGAAACAATCAGA+GGG | + | chr4_3:47447271-47447290 | Msa0643940:intron | 35.0% |
| AGAAAAAAAAAAGGGCAACC+CGG | - | chr4_3:47447458-47447477 | None:intergenic | 35.0% | |
| AATAATATCAGTCTCCCATG+CGG | + | chr4_3:47447627-47447646 | Msa0643940:CDS | 35.0% | |
| AGAGGATAAAAAATCCGCAT+GGG | - | chr4_3:47447644-47447663 | None:intergenic | 35.0% | |
| AAGAGGATAAAAAATCCGCA+TGG | - | chr4_3:47447645-47447664 | None:intergenic | 35.0% | |
| !!! | ATGCGGATTTTTTATCCTCT+TGG | + | chr4_3:47447644-47447663 | Msa0643940:CDS | 35.0% |
| ATATGCAATTCCAAGACTGT+TGG | - | chr4_3:47447778-47447797 | None:intergenic | 35.0% | |
| TTATGTGCATAAGAAGCAGA+AGG | - | chr4_3:47447817-47447836 | None:intergenic | 35.0% | |
| CTGCTTCTTATGCACATAAT+AGG | + | chr4_3:47447818-47447837 | Msa0643940:CDS | 35.0% | |
| AATCTTCATTGTCATGTTCC+CGG | + | chr4_3:47447868-47447887 | Msa0643940:CDS | 35.0% | |
| ATCTATCTAAATTGCTGCCT+GGG | + | chr4_3:47448063-47448082 | Msa0643940:CDS | 35.0% | |
| TCCTCCTCATCTAAAAAGTT+CGG | - | chr4_3:47448251-47448270 | None:intergenic | 35.0% | |
| GGTCAAGTTACCTTAGAATT+TGG | - | chr4_3:47448277-47448296 | None:intergenic | 35.0% | |
| CAAAGTTACTGCTCCATATT+AGG | - | chr4_3:47448336-47448355 | None:intergenic | 35.0% | |
| ATATGGAGCAGTAACTTTGA+TGG | + | chr4_3:47448337-47448356 | Msa0643940:intron | 35.0% | |
| ! | TTTTGACAAGGTTTCAAGCA+CGG | + | chr4_3:47448513-47448532 | Msa0643940:intron | 35.0% |
| CCTACCAAACAACATTTACT+AGG | - | chr4_3:47448577-47448596 | None:intergenic | 35.0% | |
| ! | CCTAGTAAATGTTGTTTGGT+AGG | + | chr4_3:47448574-47448593 | Msa0643940:intron | 35.0% |
| ! | GAAGTTTTTCCAATTTCCTC+TGG | - | chr4_3:47448623-47448642 | None:intergenic | 35.0% |
| TTAAACCCTCAGATGTTAGA+AGG | + | chr4_3:47448670-47448689 | Msa0643940:intron | 35.0% | |
| AGATGTTAGAAGGATAGGAT+GGG | + | chr4_3:47448680-47448699 | Msa0643940:intron | 35.0% | |
| ! | ACTGACTAATATTCTGGAGA+AGG | + | chr4_3:47448811-47448830 | Msa0643940:intron | 35.0% |
| ! | ATATCTAGTTTGGGCGAAAT+TGG | + | chr4_3:47448985-47449004 | Msa0643940:intron | 35.0% |
| !!! | ACTAAGATCCTTGTCGTTTT+TGG | + | chr4_3:47449022-47449041 | Msa0643940:intron | 35.0% |
| ATGGAGAAGAAAATGCTTAC+TGG | + | chr4_3:47449134-47449153 | Msa0643940:intron | 35.0% | |
| TAATGCCATAGAAACTTCAG+AGG | + | chr4_3:47449183-47449202 | Msa0643940:intron | 35.0% | |
| !! | CTTTTATCTGAAGTCAACAG+TGG | + | chr4_3:47449245-47449264 | Msa0643940:intron | 35.0% |
| AAGTTCAGATTGCTCTACTT+TGG | + | chr4_3:47449300-47449319 | Msa0643940:intron | 35.0% | |
| GGCAATTTAAGCTATAGTAC+AGG | + | chr4_3:47449321-47449340 | Msa0643940:intron | 35.0% | |
| GATGTATCTTATTACAACGG+TGG | - | chr4_3:47449378-47449397 | None:intergenic | 35.0% | |
| TAACAAAAATCATCGTGTCC+TGG | - | chr4_3:47449419-47449438 | None:intergenic | 35.0% | |
| GAGCGTGAATTTGTAATCAT+AGG | + | chr4_3:47449755-47449774 | Msa0643940:intron | 35.0% | |
| TAATCATAGGAAATGAGGTG+AGG | + | chr4_3:47449768-47449787 | Msa0643940:intron | 35.0% | |
| !! | GGAATATTTTGGATAAGGTC+TGG | + | chr4_3:47449820-47449839 | Msa0643940:intron | 35.0% |
| AAGACAGCTAACTAGGAAAT+AGG | - | chr4_3:47449878-47449897 | None:intergenic | 35.0% | |
| GAATGTAAAGACAGCTAACT+AGG | - | chr4_3:47449885-47449904 | None:intergenic | 35.0% | |
| ATATGACACCATGCTCTTTA+CGG | - | chr4_3:47449947-47449966 | None:intergenic | 35.0% | |
| TGAATGTGACTGATAGGAAT+AGG | - | chr4_3:47450001-47450020 | None:intergenic | 35.0% | |
| ! | TGTCTAAGTGTCATTGTTTG+TGG | + | chr4_3:47450115-47450134 | Msa0643940:intron | 35.0% |
| CTCACGTTGAATTCCAATAT+GGG | - | chr4_3:47450152-47450171 | None:intergenic | 35.0% | |
| ACTCACGTTGAATTCCAATA+TGG | - | chr4_3:47450153-47450172 | None:intergenic | 35.0% | |
| ATATTGGAATTCAACGTGAG+TGG | + | chr4_3:47450152-47450171 | Msa0643940:intron | 35.0% | |
| TATTGGAATTCAACGTGAGT+GGG | + | chr4_3:47450153-47450172 | Msa0643940:intron | 35.0% | |
| GGAAGAAGAAATGAACAAGT+TGG | + | chr4_3:47450412-47450431 | Msa0643940:intron | 35.0% | |
| !! | GAAGAAATGAACAAGTTGGT+TGG | + | chr4_3:47450416-47450435 | Msa0643940:intron | 35.0% |
| AAAAAGGGGGTAATAACAGA+AGG | + | chr4_3:47450473-47450492 | Msa0643940:intron | 35.0% | |
| AAAAGGGGGTAATAACAGAA+GGG | + | chr4_3:47450474-47450493 | Msa0643940:intron | 35.0% | |
| !! | TTCTAGAATCAGGGAATGAA+AGG | + | chr4_3:47450528-47450547 | Msa0643940:intron | 35.0% |
| ! | TCTAGAATCAGGGAATGAAA+GGG | + | chr4_3:47450529-47450548 | Msa0643940:intron | 35.0% |
| AGCAAATTGTGAACGGAATT+TGG | + | chr4_3:47450600-47450619 | Msa0643940:intron | 35.0% | |
| GCAAATTGTGAACGGAATTT+GGG | + | chr4_3:47450601-47450620 | Msa0643940:intron | 35.0% | |
| CAAATTGTGAACGGAATTTG+GGG | + | chr4_3:47450602-47450621 | Msa0643940:intron | 35.0% | |
| GAAAAGTTGTGAGTTACCTT+TGG | - | chr4_3:47450834-47450853 | None:intergenic | 35.0% | |
| CTATTTACTTCTTCTGGATC+TGG | + | chr4_3:47451151-47451170 | Msa0643940:CDS | 35.0% | |
| ATTTACTTCTTCTGGATCTG+GGG | + | chr4_3:47451153-47451172 | Msa0643940:CDS | 35.0% | |
| ! | ACTTTTTGCTTCTGTTTTGC+TGG | + | chr4_3:47451253-47451272 | Msa0643940:intron | 35.0% |
| AATCCAGGATAGGAAATTTG+AGG | + | chr4_3:47451279-47451298 | Msa0643940:intron | 35.0% | |
| ATTCCTCAAATTTCCTATCC+TGG | - | chr4_3:47451285-47451304 | None:intergenic | 35.0% | |
| ATCAATCTATCTTCGGAACT+AGG | + | chr4_3:47451456-47451475 | Msa0643940:intron | 35.0% | |
| !! | TTAGGTTTAGCTTGTCATCT+AGG | + | chr4_3:47451536-47451555 | Msa0643940:intron | 35.0% |
| !! | TGATAAGGTTGGTAACTTGA+AGG | + | chr4_3:47451653-47451672 | Msa0643940:CDS | 35.0% |
| GCTTGGAAATGCAGAATTAT+CGG | - | chr4_3:47451688-47451707 | None:intergenic | 35.0% | |
| AATTCTGCATTTCCAAGCAT+AGG | + | chr4_3:47451690-47451709 | Msa0643940:CDS | 35.0% | |
| GTATTATGTTGACCTATGCT+TGG | - | chr4_3:47451705-47451724 | None:intergenic | 35.0% | |
| !! | TCAGATACTAGTTCTGCAAA+AGG | + | chr4_3:47451861-47451880 | Msa0643940:CDS | 35.0% |
| GTCCTTAATCATGCAGATAA+CGG | + | chr4_3:47451891-47451910 | Msa0643940:CDS | 35.0% | |
| !! | GATTGTAGTTGATGAAACTC+CGG | + | chr4_3:47451944-47451963 | Msa0643940:CDS | 35.0% |
| GAGAAAACGAAAAAGAACTG+TGG | + | chr4_3:47451995-47452014 | Msa0643940:CDS | 35.0% | |
| TGTGGTAAATGATAAACTGG+TGG | + | chr4_3:47452013-47452032 | Msa0643940:CDS | 35.0% | |
| TGATAAACTGGTGGAATTGA+TGG | + | chr4_3:47452022-47452041 | Msa0643940:CDS | 35.0% | |
| ! | ATTCCTGCTTTATGTTTTCC+AGG | + | chr4_3:47452301-47452320 | Msa0643940:intron | 35.0% |
| ! | TTCCTGCTTTATGTTTTCCA+GGG | + | chr4_3:47452302-47452321 | Msa0643940:intron | 35.0% |
| !! | CACCAATTTTTAAGCTGAGA+GGG | - | chr4_3:47452341-47452360 | None:intergenic | 35.0% |
| !! | TCACCAATTTTTAAGCTGAG+AGG | - | chr4_3:47452342-47452361 | None:intergenic | 35.0% |
| TGAATTGACATACCAATGTC+CGG | - | chr4_3:47452410-47452429 | None:intergenic | 35.0% | |
| TTGAACTATCCTTAGATGTG+CGG | - | chr4_3:47452509-47452528 | None:intergenic | 35.0% | |
| TCGACAAATTCAGCAAGTTA+AGG | - | chr4_3:47452644-47452663 | None:intergenic | 35.0% | |
| TATGAGCTATATGCTGACAA+AGG | + | chr4_3:47452821-47452840 | Msa0643940:CDS | 35.0% | |
| ATGAGCTATATGCTGACAAA+GGG | + | chr4_3:47452822-47452841 | Msa0643940:CDS | 35.0% | |
| AAGTACCAGTAAGTTCAGAT+GGG | - | chr4_3:47452862-47452881 | None:intergenic | 35.0% | |
| AAGACTGCAGTACAAGAATT+CGG | - | chr4_3:47452940-47452959 | None:intergenic | 35.0% | |
| !! | TCTCAACCATTGATTTGAGA+TGG | + | chr4_3:47453232-47453251 | Msa0643940:three_prime_UTR | 35.0% |
| TCAACCACTTGAATGTGACT+AGG | + | chr4_3:47441813-47441832 | Msa0643940:intron | 40.0% | |
| GAATCCTAGTCACATTCAAG+TGG | - | chr4_3:47441820-47441839 | None:intergenic | 40.0% | |
| ATTGCACAAACTCAACTCTC+GGG | + | chr4_3:47441949-47441968 | Msa0643940:CDS | 40.0% | |
| !! | TTTTCCGTTGACTACCTTAC+TGG | + | chr4_3:47442004-47442023 | Msa0643940:CDS | 40.0% |
| ! | GCAGAACTCTTTTTCCAGTA+AGG | - | chr4_3:47442021-47442040 | None:intergenic | 40.0% |
| TGGAAAAAGAGTTCTGCTGA+AGG | + | chr4_3:47442024-47442043 | Msa0643940:CDS | 40.0% | |
| AGTGTTGTAGTGAGATGCAA+TGG | - | chr4_3:47442156-47442175 | None:intergenic | 40.0% | |
| ATCAAATTTAGGAAGCCGAG+GGG | - | chr4_3:47442259-47442278 | None:intergenic | 40.0% | |
| GATCAAATTTAGGAAGCCGA+GGG | - | chr4_3:47442260-47442279 | None:intergenic | 40.0% | |
| TGATCAAATTTAGGAAGCCG+AGG | - | chr4_3:47442261-47442280 | None:intergenic | 40.0% | |
| TCGGCTTCCTAAATTTGATC+AGG | + | chr4_3:47442260-47442279 | Msa0643940:CDS | 40.0% | |
| CTGCTGACCTGATCAAATTT+AGG | - | chr4_3:47442270-47442289 | None:intergenic | 40.0% | |
| !! | AAGGGTCAGTTGATGGTTAA+TGG | - | chr4_3:47442457-47442476 | None:intergenic | 40.0% |
| ACTGAAGAAAACCTGTCTGT+AGG | - | chr4_3:47442655-47442674 | None:intergenic | 40.0% | |
| ACAAGTGAACTTGTACCTTC+GGG | - | chr4_3:47442887-47442906 | None:intergenic | 40.0% | |
| TTTCTACCAGCCATGTCTAA+TGG | - | chr4_3:47442955-47442974 | None:intergenic | 40.0% | |
| TAAACTACTTGTTCAGACGG+AGG | - | chr4_3:47443369-47443388 | None:intergenic | 40.0% | |
| GTGCCAGCAGAAATTGTTTA+AGG | + | chr4_3:47443437-47443456 | Msa0643940:CDS | 40.0% | |
| GCTCCTTAAACAATTTCTGC+TGG | - | chr4_3:47443443-47443462 | None:intergenic | 40.0% | |
| AATGGCTTTCTCATGAAACC+CGG | + | chr4_3:47443814-47443833 | Msa0643940:intron | 40.0% | |
| ATATATGCTCCAACTTGAGG+GGG | - | chr4_3:47444122-47444141 | None:intergenic | 40.0% | |
| ! | TGGAATTTGCTCAAATGGCT+GGG | - | chr4_3:47444199-47444218 | None:intergenic | 40.0% |
| AAATACTACAGGGGGTAAAC+TGG | - | chr4_3:47444219-47444238 | None:intergenic | 40.0% | |
| AAATTCGCCTAAATGTCAGG+AGG | - | chr4_3:47444328-47444347 | None:intergenic | 40.0% | |
| CCAAAATTCGCCTAAATGTC+AGG | - | chr4_3:47444331-47444350 | None:intergenic | 40.0% | |
| ! | CCTGACATTTAGGCGAATTT+TGG | + | chr4_3:47444328-47444347 | Msa0643940:intron | 40.0% |
| TGGTTTACCTCCTGACATTT+AGG | + | chr4_3:47444348-47444367 | Msa0643940:intron | 40.0% | |
| AAATTCGCCTAAATGTCAGG+AGG | - | chr4_3:47444328-47444347 | None:intergenic | 40.0% | |
| TAAATCCTAGGGAGGTAAAC+CGG | + | chr4_3:47444435-47444454 | Msa0643940:intron | 40.0% | |
| GATATTGGCGAACTGGTTAT+TGG | + | chr4_3:47444534-47444553 | Msa0643940:intron | 40.0% | |
| GTTATTGGAGCTCAATGAAG+AGG | + | chr4_3:47444549-47444568 | Msa0643940:intron | 40.0% | |
| TTAAAAGGCCACCTAGGAAA+TGG | - | chr4_3:47444891-47444910 | None:intergenic | 40.0% | |
| GGTATATTAAAAGGCCACCT+AGG | - | chr4_3:47444897-47444916 | None:intergenic | 40.0% | |
| TAATAGCCATTGGAATGCAG+TGG | - | chr4_3:47444932-47444951 | None:intergenic | 40.0% | |
| TGCGAGTCAATTTCTAAACG+GGG | - | chr4_3:47444959-47444978 | None:intergenic | 40.0% | |
| AGACATGACTTCCCCTTATT+TGG | + | chr4_3:47445054-47445073 | Msa0643940:intron | 40.0% | |
| CCATGAAGTAACTCAATCAC+AGG | - | chr4_3:47445189-47445208 | None:intergenic | 40.0% | |
| CCTGTGATTGAGTTACTTCA+TGG | + | chr4_3:47445186-47445205 | Msa0643940:intron | 40.0% | |
| GTGGTCACATATTCTTGTCA+TGG | + | chr4_3:47445612-47445631 | Msa0643940:intron | 40.0% | |
| ACCTTCCCTATACTTCATGA+TGG | + | chr4_3:47445673-47445692 | Msa0643940:intron | 40.0% | |
| ACCATCATGAAGTATAGGGA+AGG | - | chr4_3:47445677-47445696 | None:intergenic | 40.0% | |
| TTCCCTATACTTCATGATGG+TGG | + | chr4_3:47445676-47445695 | Msa0643940:intron | 40.0% | |
| TCCCTATACTTCATGATGGT+GGG | + | chr4_3:47445677-47445696 | Msa0643940:intron | 40.0% | |
| TCCCACCATCATGAAGTATA+GGG | - | chr4_3:47445681-47445700 | None:intergenic | 40.0% | |
| TTCCCACCATCATGAAGTAT+AGG | - | chr4_3:47445682-47445701 | None:intergenic | 40.0% | |
| CATTTCGTTTGTCGATCAAG+TGG | + | chr4_3:47445823-47445842 | Msa0643940:CDS | 40.0% | |
| TTTGGCTAAATCTGTTGCAG+TGG | + | chr4_3:47445868-47445887 | Msa0643940:CDS | 40.0% | |
| TTCAACATTCCACCTTAAGC+TGG | + | chr4_3:47446215-47446234 | Msa0643940:intron | 40.0% | |
| ATATAAGCTCCAGCTTAAGG+TGG | - | chr4_3:47446227-47446246 | None:intergenic | 40.0% | |
| ACTAATGGCACGCTCTTTAT+TGG | + | chr4_3:47446530-47446549 | Msa0643940:intron | 40.0% | |
| TGAAATGAATCACGTCCTCA+AGG | - | chr4_3:47446630-47446649 | None:intergenic | 40.0% | |
| GAGGACGTGATTCATTTCAA+AGG | + | chr4_3:47446631-47446650 | Msa0643940:intron | 40.0% | |
| GACGTGATTCATTTCAAAGG+TGG | + | chr4_3:47446634-47446653 | Msa0643940:intron | 40.0% | |
| GGGATACTAACCGAAAAGAT+GGG | + | chr4_3:47446737-47446756 | Msa0643940:intron | 40.0% | |
| GGATACTAACCGAAAAGATG+GGG | + | chr4_3:47446738-47446757 | Msa0643940:intron | 40.0% | |
| AGAATGATGTGGGAAATTGC+GGG | + | chr4_3:47446768-47446787 | Msa0643940:intron | 40.0% | |
| GGATGGTTCTTATCTCAGTA+AGG | + | chr4_3:47446803-47446822 | Msa0643940:intron | 40.0% | |
| !! | CCTTGCCATTCTCATTTTTG+CGG | + | chr4_3:47446835-47446854 | Msa0643940:intron | 40.0% |
| GATAGCCGCAAAAATGAGAA+TGG | - | chr4_3:47446843-47446862 | None:intergenic | 40.0% | |
| !!! | GACTTGTTGAAGTCTGCTTT+TGG | + | chr4_3:47447015-47447034 | Msa0643940:CDS | 40.0% |
| !!! | GGATAACTTGCTTGGTGTTT+TGG | + | chr4_3:47447194-47447213 | Msa0643940:intron | 40.0% |
| ! | CTTCTGAGAAACAATCAGAG+GGG | + | chr4_3:47447272-47447291 | Msa0643940:intron | 40.0% |
| GTTGTTGTCATGTGACTGAA+AGG | + | chr4_3:47447317-47447336 | Msa0643940:intron | 40.0% | |
| AACAGCCTCTTGTGTAAAAC+AGG | + | chr4_3:47447360-47447379 | Msa0643940:intron | 40.0% | |
| ACAGCCTCTTGTGTAAAACA+GGG | + | chr4_3:47447361-47447380 | Msa0643940:intron | 40.0% | |
| ! | CTTACCCTGTTTTACACAAG+AGG | - | chr4_3:47447368-47447387 | None:intergenic | 40.0% |
| CTCTTGTGTAAAACAGGGTA+AGG | + | chr4_3:47447366-47447385 | Msa0643940:intron | 40.0% | |
| ! | TAGTCTGGAATCACATGCAA+AGG | - | chr4_3:47447594-47447613 | None:intergenic | 40.0% |
| TTGCTGTCAGAACTTTAGTC+TGG | - | chr4_3:47447609-47447628 | None:intergenic | 40.0% | |
| !! | CTCTGTTTCTGAGAGATTAG+AGG | - | chr4_3:47447674-47447693 | None:intergenic | 40.0% |
| CTCTAATCTCTCAGAAACAG+AGG | + | chr4_3:47447672-47447691 | Msa0643940:CDS | 40.0% | |
| TAATCTCTCAGAAACAGAGG+AGG | + | chr4_3:47447675-47447694 | Msa0643940:CDS | 40.0% | |
| !! | TGCTTCAGTTGGATGGATTT+TGG | + | chr4_3:47447723-47447742 | Msa0643940:CDS | 40.0% |
| TCTACAGAATCCAACAGTCT+TGG | + | chr4_3:47447765-47447784 | Msa0643940:CDS | 40.0% | |
| !! | ACATTAGTAAGCGTTGGCAA+GGG | - | chr4_3:47447911-47447930 | None:intergenic | 40.0% |
| !! | AACATTAGTAAGCGTTGGCA+AGG | - | chr4_3:47447912-47447931 | None:intergenic | 40.0% |
| TTTACTCTGCAGAAAGTGAG+AGG | + | chr4_3:47448000-47448019 | Msa0643940:intron | 40.0% | |
| !! | CTTTTTCATTCGAACGTTCC+TGG | + | chr4_3:47448025-47448044 | Msa0643940:CDS | 40.0% |
| GATCTATCTAAATTGCTGCC+TGG | + | chr4_3:47448062-47448081 | Msa0643940:CDS | 40.0% | |
| TTGCTAACAGTAGCAGCTTT+AGG | - | chr4_3:47448110-47448129 | None:intergenic | 40.0% | |
| ! | GATGCCGAACTTTTTAGATG+AGG | + | chr4_3:47448244-47448263 | Msa0643940:CDS | 40.0% |
| AGGAGGATGTCCAAATTCTA+AGG | + | chr4_3:47448264-47448283 | Msa0643940:CDS | 40.0% | |
| !!! | CATTGGCAGATGTTTTGACA+AGG | + | chr4_3:47448501-47448520 | Msa0643940:intron | 40.0% |
| ATAGCCATGAACCTATGTTC+CGG | - | chr4_3:47448540-47448559 | None:intergenic | 40.0% | |
| TGTTTGGTAGGAAAAAGGAG+AGG | + | chr4_3:47448586-47448605 | Msa0643940:intron | 40.0% | |
| CCTATCCTTCTAACATCTGA+GGG | - | chr4_3:47448678-47448697 | None:intergenic | 40.0% | |
| TCCTATCCTTCTAACATCTG+AGG | - | chr4_3:47448679-47448698 | None:intergenic | 40.0% | |
| CAGATGTTAGAAGGATAGGA+TGG | + | chr4_3:47448679-47448698 | Msa0643940:intron | 40.0% | |
| ! | CTAATATTCTGGAGAAGGTC+CGG | + | chr4_3:47448816-47448835 | Msa0643940:intron | 40.0% |
| ! | TAATATTCTGGAGAAGGTCC+GGG | + | chr4_3:47448817-47448836 | Msa0643940:intron | 40.0% |
| GAGAAGAAAATGCTTACTGG+TGG | + | chr4_3:47449137-47449156 | Msa0643940:intron | 40.0% | |
| TGAAGTCAACAGTGGAGTTT+GGG | + | chr4_3:47449253-47449272 | Msa0643940:intron | 40.0% | |
| GAGACTGAGAAATATTGTCC+AGG | + | chr4_3:47449398-47449417 | Msa0643940:intron | 40.0% | |
| TAATATGTCACCTTGAGGAC+TGG | + | chr4_3:47449437-47449456 | Msa0643940:intron | 40.0% | |
| GAAAAATTCACCAGTCCTCA+AGG | - | chr4_3:47449450-47449469 | None:intergenic | 40.0% | |
| !! | AGGACTGGTGAATTTTTCTG+AGG | + | chr4_3:47449452-47449471 | Msa0643940:intron | 40.0% |
| !! | GGACTGGTGAATTTTTCTGA+GGG | + | chr4_3:47449453-47449472 | Msa0643940:intron | 40.0% |
| ! | GACTGGTGAATTTTTCTGAG+GGG | + | chr4_3:47449454-47449473 | Msa0643940:intron | 40.0% |
| ATTGTGTCCTAACATCTGTG+GGG | - | chr4_3:47449492-47449511 | None:intergenic | 40.0% | |
| CATTGTGTCCTAACATCTGT+GGG | - | chr4_3:47449493-47449512 | None:intergenic | 40.0% | |
| TCATTGTGTCCTAACATCTG+TGG | - | chr4_3:47449494-47449513 | None:intergenic | 40.0% | |
| ! | GAGTAAGGCAGGGAATATTT+TGG | + | chr4_3:47449809-47449828 | Msa0643940:intron | 40.0% |
| !! | GGCAGGGAATATTTTGGATA+AGG | + | chr4_3:47449815-47449834 | Msa0643940:intron | 40.0% |
| TGGGCAAGCATTACAGTTAA+GGG | + | chr4_3:47449840-47449859 | Msa0643940:intron | 40.0% | |
| GCTAACTAGGAAATAGGAGA+TGG | - | chr4_3:47449872-47449891 | None:intergenic | 40.0% | |
| GAAGGATGAATGTGACTGAT+AGG | - | chr4_3:47450007-47450026 | None:intergenic | 40.0% | |
| ! | TCCTTCGTGCTTTAGATGTT+CGG | + | chr4_3:47450021-47450040 | Msa0643940:intron | 40.0% |
| GGATTTGAATCCTCCCATAT+TGG | + | chr4_3:47450136-47450155 | Msa0643940:intron | 40.0% | |
| ACGTTGAATTCCAATATGGG+AGG | - | chr4_3:47450149-47450168 | None:intergenic | 40.0% | |
| ATTGGAATTCAACGTGAGTG+GGG | + | chr4_3:47450154-47450173 | Msa0643940:intron | 40.0% | |
| ACTGGTAGGTACATGATGTA+TGG | + | chr4_3:47450333-47450352 | Msa0643940:intron | 40.0% | |
| CTGGTAGGTACATGATGTAT+GGG | + | chr4_3:47450334-47450353 | Msa0643940:intron | 40.0% | |
| AACCACAGACCCTTATTCAT+GGG | - | chr4_3:47450387-47450406 | None:intergenic | 40.0% | |
| AAACCACAGACCCTTATTCA+TGG | - | chr4_3:47450388-47450407 | None:intergenic | 40.0% | |
| ! | ATAAGGGTCTGTGGTTTTTC+TGG | + | chr4_3:47450391-47450410 | Msa0643940:intron | 40.0% |
| !! | AATGAACAAGTTGGTTGGAG+TGG | + | chr4_3:47450421-47450440 | Msa0643940:intron | 40.0% |
| GTAATAACAGAAGGGCTATG+CGG | + | chr4_3:47450482-47450501 | Msa0643940:intron | 40.0% | |
| GAAAGGTTGAGTGAAGAAGT+TGG | + | chr4_3:47450624-47450643 | Msa0643940:intron | 40.0% | |
| ! | AGTGAAGAAGTTGGTTCTTC+TGG | + | chr4_3:47450633-47450652 | Msa0643940:intron | 40.0% |
| ! | AGAAGTTGGTTCTTCTGGAA+AGG | + | chr4_3:47450638-47450657 | Msa0643940:intron | 40.0% |
| ! | GAAGTTGGTTCTTCTGGAAA+GGG | + | chr4_3:47450639-47450658 | Msa0643940:intron | 40.0% |
| TTAGTTACGCGGTTCTTGAT+AGG | - | chr4_3:47450811-47450830 | None:intergenic | 40.0% | |
| ! | GTTACCTTTGGTTAGTTACG+CGG | - | chr4_3:47450822-47450841 | None:intergenic | 40.0% |
| TTTACTTCTTCTGGATCTGG+GGG | + | chr4_3:47451154-47451173 | Msa0643940:CDS | 40.0% | |
| GCAGGTTCGTTTACTTGTAA+AGG | - | chr4_3:47451627-47451646 | None:intergenic | 40.0% | |
| !! | AAGGTTGGTAACTTGAAGGA+AGG | + | chr4_3:47451657-47451676 | Msa0643940:CDS | 40.0% |
| AGGAGTAAGAGATACAGACA+AGG | + | chr4_3:47451812-47451831 | Msa0643940:CDS | 40.0% | |
| ! | TCAGAATCAATGAAGCGTCT+TGG | + | chr4_3:47451918-47451937 | Msa0643940:CDS | 40.0% |
| AAATGAGCCAGAGGATGAAA+AGG | + | chr4_3:47452079-47452098 | Msa0643940:CDS | 40.0% | |
| ! | AAATGGTGGAATTGATGGAG+AGG | + | chr4_3:47452147-47452166 | Msa0643940:CDS | 40.0% |
| ! | AATGGTGGAATTGATGGAGA+GGG | + | chr4_3:47452148-47452167 | Msa0643940:CDS | 40.0% |
| AACCCTGGAAAACATAAAGC+AGG | - | chr4_3:47452307-47452326 | None:intergenic | 40.0% | |
| CACCCTCTCAGCTTAAAAAT+TGG | + | chr4_3:47452336-47452355 | Msa0643940:CDS | 40.0% | |
| TGAACTATCCTTAGATGTGC+GGG | - | chr4_3:47452508-47452527 | None:intergenic | 40.0% | |
| TCAACGCCAGATAAGCAAAA+AGG | + | chr4_3:47452525-47452544 | Msa0643940:CDS | 40.0% | |
| CAACGCCAGATAAGCAAAAA+GGG | + | chr4_3:47452526-47452545 | Msa0643940:CDS | 40.0% | |
| ACCAAGATTGTTAGGTGAGT+CGG | - | chr4_3:47452568-47452587 | None:intergenic | 40.0% | |
| TCTTGCTCACCAAGATTGTT+AGG | - | chr4_3:47452576-47452595 | None:intergenic | 40.0% | |
| AGAGGAGATTGGTAAAGGAA+AGG | + | chr4_3:47452730-47452749 | Msa0643940:CDS | 40.0% | |
| !! | TGGTAAAGGAAAGGTACTTC+AGG | + | chr4_3:47452739-47452758 | Msa0643940:CDS | 40.0% |
| TACTTCAGGTGAATGGCAAA+TGG | + | chr4_3:47452753-47452772 | Msa0643940:CDS | 40.0% | |
| CAAATGGTATGGAAAGAGCT+TGG | + | chr4_3:47452769-47452788 | Msa0643940:CDS | 40.0% | |
| GAAAGAGCTTGGAGGAATTA+GGG | + | chr4_3:47452780-47452799 | Msa0643940:CDS | 40.0% | |
| AAAGAGCTTGGAGGAATTAG+GGG | + | chr4_3:47452781-47452800 | Msa0643940:CDS | 40.0% | |
| GGAATTAGGGGTCTATGTTA+TGG | + | chr4_3:47452793-47452812 | Msa0643940:CDS | 40.0% | |
| ! | GAAGTACCAGTAAGTTCAGA+TGG | - | chr4_3:47452863-47452882 | None:intergenic | 40.0% |
| TACTGGTACTTCATTTGCAG+AGG | + | chr4_3:47452871-47452890 | Msa0643940:CDS | 40.0% | |
| TGAGCTCAAATGCTCAATGA+TGG | + | chr4_3:47452962-47452981 | Msa0643940:exon | 40.0% | |
| TGAATCTAGTTGAAGCTAGC+AGG | - | chr4_3:47452991-47453010 | None:intergenic | 40.0% | |
| ! | GCTAGCTTCAACTAGATTCA+AGG | + | chr4_3:47452991-47453010 | Msa0643940:three_prime_UTR | 40.0% |
| ACTGTGCCATCTCAAATCAA+TGG | - | chr4_3:47453241-47453260 | None:intergenic | 40.0% | |
| GTGTTCAAACACGTGTTACG+TGG | + | chr4_3:47442201-47442220 | Msa0643940:CDS | 45.0% | |
| CTACGAGAGCAGAATGCAAA+AGG | - | chr4_3:47442791-47442810 | None:intergenic | 45.0% | |
| TAGTGTCCATTAGACATGGC+TGG | + | chr4_3:47442946-47442965 | Msa0643940:intron | 45.0% | |
| AGACGGAGGATTTGATTCCA+TGG | - | chr4_3:47443355-47443374 | None:intergenic | 45.0% | |
| ! | TTTTCTCTGCCAGCAATGTG+AGG | + | chr4_3:47443389-47443408 | Msa0643940:CDS | 45.0% |
| TGATTAGGGCCTGTTTGGAT+TGG | + | chr4_3:47443525-47443544 | Msa0643940:intron | 45.0% | |
| TATATGCTCCAACTTGAGGG+GGG | - | chr4_3:47444121-47444140 | None:intergenic | 45.0% | |
| ! | GAATTTGCTCAAATGGCTGG+GGG | - | chr4_3:47444197-47444216 | None:intergenic | 45.0% |
| ! | GGAATTTGCTCAAATGGCTG+GGG | - | chr4_3:47444198-47444217 | None:intergenic | 45.0% |
| ! | CTGGAATTTGCTCAAATGGC+TGG | - | chr4_3:47444200-47444219 | None:intergenic | 45.0% |
| ACTTTCGCCTCCTGACATTT+AGG | + | chr4_3:47444318-47444337 | Msa0643940:intron | 45.0% | |
| ! | CCTGCCATTTGAGTGAATTC+CGG | - | chr4_3:47444457-47444476 | None:intergenic | 45.0% |
| CGGAATTCACTCAAATGGCA+GGG | + | chr4_3:47444455-47444474 | Msa0643940:intron | 45.0% | |
| GGAATTCACTCAAATGGCAG+GGG | + | chr4_3:47444456-47444475 | Msa0643940:intron | 45.0% | |
| GAATTCACTCAAATGGCAGG+GGG | + | chr4_3:47444457-47444476 | Msa0643940:intron | 45.0% | |
| TTGAGGTCCCTGTAGAGATT+TGG | + | chr4_3:47444507-47444526 | Msa0643940:intron | 45.0% | |
| TGGTGAAGATATTGGCGAAC+TGG | + | chr4_3:47444527-47444546 | Msa0643940:intron | 45.0% | |
| CAGGTGATGTAAGTGATGAG+TGG | - | chr4_3:47444810-47444829 | None:intergenic | 45.0% | |
| ! | ATGCAGTGGTTCGGATCTTA+AGG | - | chr4_3:47444918-47444937 | None:intergenic | 45.0% |
| AACAAACGCGACATCTGGTT+TGG | + | chr4_3:47444978-47444997 | Msa0643940:intron | 45.0% | |
| GGTAAGTCTTGGCAACTGTT+AGG | + | chr4_3:47445571-47445590 | Msa0643940:intron | 45.0% | |
| TATGTGACCACCAGGTAACA+TGG | - | chr4_3:47445603-47445622 | None:intergenic | 45.0% | |
| GACAAGAATATGTGACCACC+AGG | - | chr4_3:47445611-47445630 | None:intergenic | 45.0% | |
| ATGGAAAGAGTCTTCTGCCA+TGG | + | chr4_3:47445631-47445650 | Msa0643940:intron | 45.0% | |
| TGGAAAGAGTCTTCTGCCAT+GGG | + | chr4_3:47445632-47445651 | Msa0643940:intron | 45.0% | |
| !! | AACTGATTTGAGGACCTCCA+AGG | + | chr4_3:47446271-47446290 | Msa0643940:intron | 45.0% |
| !! | ACTGATTTGAGGACCTCCAA+GGG | + | chr4_3:47446272-47446291 | Msa0643940:intron | 45.0% |
| GATGTCTTCACCAAATCCCT+TGG | - | chr4_3:47446291-47446310 | None:intergenic | 45.0% | |
| GTGGGGAGGAAGTAACATAA+TGG | + | chr4_3:47446705-47446724 | Msa0643940:intron | 45.0% | |
| GGGGATACTAACCGAAAAGA+TGG | + | chr4_3:47446736-47446755 | Msa0643940:intron | 45.0% | |
| CCGCAAAAATGAGAATGGCA+AGG | - | chr4_3:47446838-47446857 | None:intergenic | 45.0% | |
| !! | TCTGCTTTTGGAAGAAACCC+TGG | + | chr4_3:47447027-47447046 | Msa0643940:CDS | 45.0% |
| !! | CTGCTTTTGGAAGAAACCCT+GGG | + | chr4_3:47447028-47447047 | Msa0643940:CDS | 45.0% |
| AACAATCAGAGGGGTAACCT+TGG | + | chr4_3:47447281-47447300 | Msa0643940:intron | 45.0% | |
| GTCATGTGACTGAAAGGTCA+CGG | + | chr4_3:47447323-47447342 | Msa0643940:intron | 45.0% | |
| TCATGTGACTGAAAGGTCAC+GGG | + | chr4_3:47447324-47447343 | Msa0643940:intron | 45.0% | |
| ! | TTACACAAGAGGCTGTTTCC+AGG | - | chr4_3:47447357-47447376 | None:intergenic | 45.0% |
| CGTACAATGCACCAAATGGT+GGG | + | chr4_3:47447392-47447411 | Msa0643940:intron | 45.0% | |
| GAGATTAGAGGAACACCAAG+AGG | - | chr4_3:47447662-47447681 | None:intergenic | 45.0% | |
| TCAGATGCGAAAGAAAACCC+AGG | - | chr4_3:47448083-47448102 | None:intergenic | 45.0% | |
| ! | GCCGAACTTTTTAGATGAGG+AGG | + | chr4_3:47448247-47448266 | Msa0643940:CDS | 45.0% |
| GGAACATAGGTTCATGGCTA+TGG | + | chr4_3:47448539-47448558 | Msa0643940:intron | 45.0% | |
| GGAAAAAGGAGAGGTTGTGT+AGG | + | chr4_3:47448595-47448614 | Msa0643940:intron | 45.0% | |
| CCCTCAGATGTTAGAAGGAT+AGG | + | chr4_3:47448675-47448694 | Msa0643940:intron | 45.0% | |
| AGGAAGTTGGATCGCAAGAT+TGG | + | chr4_3:47449062-47449081 | Msa0643940:intron | 45.0% | |
| AGTTGGATCGCAAGATTGGA+AGG | + | chr4_3:47449066-47449085 | Msa0643940:intron | 45.0% | |
| GTTGGATCGCAAGATTGGAA+GGG | + | chr4_3:47449067-47449086 | Msa0643940:intron | 45.0% | |
| !! | GTGCTCCTCTGAAGTTTCTA+TGG | - | chr4_3:47449191-47449210 | None:intergenic | 45.0% |
| CTGAAGTCAACAGTGGAGTT+TGG | + | chr4_3:47449252-47449271 | Msa0643940:intron | 45.0% | |
| AGTGGAGTTTGGGAAATCCA+GGG | + | chr4_3:47449263-47449282 | Msa0643940:intron | 45.0% | |
| CTTTCAACCAAGTCAAACCC+TGG | - | chr4_3:47449283-47449302 | None:intergenic | 45.0% | |
| TGTTAGACCCCACAGATGTT+AGG | + | chr4_3:47449482-47449501 | Msa0643940:intron | 45.0% | |
| CTGGGCAAGCATTACAGTTA+AGG | + | chr4_3:47449839-47449858 | Msa0643940:intron | 45.0% | |
| GCAAGCATTACAGTTAAGGG+AGG | + | chr4_3:47449843-47449862 | Msa0643940:intron | 45.0% | |
| ! | TCCGAACATCTAAAGCACGA+AGG | - | chr4_3:47450025-47450044 | None:intergenic | 45.0% |
| ! | TTCGTGCTTTAGATGTTCGG+AGG | + | chr4_3:47450024-47450043 | Msa0643940:intron | 45.0% |
| TTTAGATGTTCGGAGGAGTG+AGG | + | chr4_3:47450031-47450050 | Msa0643940:intron | 45.0% | |
| ! | AAGTTGGTTGGAGTGGAAAG+AGG | + | chr4_3:47450428-47450447 | Msa0643940:intron | 45.0% |
| AGTTGGTTGGAGTGGAAAGA+GGG | + | chr4_3:47450429-47450448 | Msa0643940:intron | 45.0% | |
| GAGTGGAAAGAGGGAATACA+TGG | + | chr4_3:47450438-47450457 | Msa0643940:intron | 45.0% | |
| TGGAAAGAGGGAATACATGG+AGG | + | chr4_3:47450441-47450460 | Msa0643940:intron | 45.0% | |
| GGAAAGAGGGAATACATGGA+GGG | + | chr4_3:47450442-47450461 | Msa0643940:intron | 45.0% | |
| AGGGAATACATGGAGGGAAT+GGG | + | chr4_3:47450448-47450467 | Msa0643940:intron | 45.0% | |
| ATGGAGGGAATGGGAGAAAA+AGG | + | chr4_3:47450457-47450476 | Msa0643940:intron | 45.0% | |
| TGGAGGGAATGGGAGAAAAA+GGG | + | chr4_3:47450458-47450477 | Msa0643940:intron | 45.0% | |
| !! | TGGTGGGGAATTCTAGAATC+AGG | + | chr4_3:47450518-47450537 | Msa0643940:intron | 45.0% |
| !! | GGTGGGGAATTCTAGAATCA+GGG | + | chr4_3:47450519-47450538 | Msa0643940:intron | 45.0% |
| TGTGAACGGAATTTGGGGAA+AGG | + | chr4_3:47450607-47450626 | Msa0643940:intron | 45.0% | |
| AGAACCGCGTAACTAACCAA+AGG | + | chr4_3:47450815-47450834 | Msa0643940:intron | 45.0% | |
| ! | AAAGTTTACATGGTGGGGAG+AGG | + | chr4_3:47450859-47450878 | Msa0643940:intron | 45.0% |
| ! | CTGTTTTGCTGGAGAAATCC+AGG | + | chr4_3:47451264-47451283 | Msa0643940:intron | 45.0% |
| TTGCTGGAGAAATCCAGGAT+AGG | + | chr4_3:47451269-47451288 | Msa0643940:intron | 45.0% | |
| TTGTAGGAGGCTCAGAGTAT+AGG | + | chr4_3:47451588-47451607 | Msa0643940:intron | 45.0% | |
| TGTAGGAGGCTCAGAGTATA+GGG | + | chr4_3:47451589-47451608 | Msa0643940:intron | 45.0% | |
| CGAACCTGCTGAACTTGATA+AGG | + | chr4_3:47451638-47451657 | Msa0643940:CDS | 45.0% | |
| CCAACCTTATCAAGTTCAGC+AGG | - | chr4_3:47451645-47451664 | None:intergenic | 45.0% | |
| CCTGCTGAACTTGATAAGGT+TGG | + | chr4_3:47451642-47451661 | Msa0643940:CDS | 45.0% | |
| CAACATCAGGTAGGAGGTAA+AGG | + | chr4_3:47451765-47451784 | Msa0643940:CDS | 45.0% | |
| TCAGGTAGGAGGTAAAGGTA+TGG | + | chr4_3:47451770-47451789 | Msa0643940:CDS | 45.0% | |
| GCTAGCAACACTGTGTTAAG+AGG | + | chr4_3:47451792-47451811 | Msa0643940:CDS | 45.0% | |
| GCTCAGAAAGCTGAAACAAG+TGG | + | chr4_3:47451837-47451856 | Msa0643940:CDS | 45.0% | |
| CGCCGTTATCTGCATGATTA+AGG | - | chr4_3:47451896-47451915 | None:intergenic | 45.0% | |
| TGAAACTCCGGACGATGAAA+AGG | + | chr4_3:47451956-47451975 | Msa0643940:CDS | 45.0% | |
| ! | GGTTGAACCTTTTCATCGTC+CGG | - | chr4_3:47451966-47451985 | None:intergenic | 45.0% |
| ! | GGTTCAACCTTTTCATCCTC+TGG | - | chr4_3:47452089-47452108 | None:intergenic | 45.0% |
| ATGCAGCGTCACTTCAATCA+TGG | + | chr4_3:47452201-47452220 | Msa0643940:CDS | 45.0% | |
| TGCAGCGTCACTTCAATCAT+GGG | + | chr4_3:47452202-47452221 | Msa0643940:CDS | 45.0% | |
| TATTTGCAGCTTCCGGACAT+TGG | + | chr4_3:47452395-47452414 | Msa0643940:intron | 45.0% | |
| ! | ACTGGCCCTTTTTGCTTATC+TGG | - | chr4_3:47452534-47452553 | None:intergenic | 45.0% |
| AAGATTGTTAGGTGAGTCGG+AGG | - | chr4_3:47452565-47452584 | None:intergenic | 45.0% | |
| TCCGACTCACCTAACAATCT+TGG | + | chr4_3:47452564-47452583 | Msa0643940:CDS | 45.0% | |
| TTGCAACGAACGACTTCTAG+AGG | - | chr4_3:47452674-47452693 | None:intergenic | 45.0% | |
| GAAGTCGTTCGTTGCAATGT+TGG | + | chr4_3:47452677-47452696 | Msa0643940:CDS | 45.0% | |
| !! | CAATGTTGGTCAAAGTGCTG+TGG | + | chr4_3:47452691-47452710 | Msa0643940:CDS | 45.0% |
| !! | GGAAAGGTACTTCAGGTGAA+TGG | + | chr4_3:47452746-47452765 | Msa0643940:CDS | 45.0% |
| CAGGTGAATGGCAAATGGTA+TGG | + | chr4_3:47452758-47452777 | Msa0643940:CDS | 45.0% | |
| ATGGTATGGAAAGAGCTTGG+AGG | + | chr4_3:47452772-47452791 | Msa0643940:CDS | 45.0% | |
| GGAAAGAGCTTGGAGGAATT+AGG | + | chr4_3:47452779-47452798 | Msa0643940:CDS | 45.0% | |
| CCAGTAAGTTCAGATGGGAA+AGG | - | chr4_3:47452857-47452876 | None:intergenic | 45.0% | |
| CCTTTCCCATCTGAACTTAC+TGG | + | chr4_3:47452854-47452873 | Msa0643940:CDS | 45.0% | |
| GCAGAGGCTGAAAGAAAGTT+AGG | + | chr4_3:47452887-47452906 | Msa0643940:CDS | 45.0% | |
| TGTTTGTATGGGGTAACTGC+TGG | - | chr4_3:47453028-47453047 | None:intergenic | 45.0% | |
| AAGGAAGAACCATCTCGCAG+CGG | + | chr4_3:47441776-47441795 | Msa0643940:CDS | 50.0% | |
| CGGGTGTGCAAGCAAAACAT+TGG | - | chr4_3:47442868-47442887 | None:intergenic | 50.0% | |
| ! | TGTTTTGCTTGCACACCCGA+AGG | + | chr4_3:47442869-47442888 | Msa0643940:CDS | 50.0% |
| ! | GGTCAGTTCGCGTTGTTGTT+AGG | + | chr4_3:47443289-47443308 | Msa0643940:CDS | 50.0% |
| GTAGAGAAGCCTCACATTGC+TGG | - | chr4_3:47443401-47443420 | None:intergenic | 50.0% | |
| ATTTCTGCTGGCACAATGCG+TGG | - | chr4_3:47443431-47443450 | None:intergenic | 50.0% | |
| ! | GGAGCGCCTGCTCAATAATA+AGG | + | chr4_3:47443458-47443477 | Msa0643940:CDS | 50.0% |
| GCTTTCTCATGAAACCCGGT+TGG | + | chr4_3:47443818-47443837 | Msa0643940:intron | 50.0% | |
| GAATTCCGGTTTACCTCCCT+AGG | - | chr4_3:47444443-47444462 | None:intergenic | 50.0% | |
| CCGGAATTCACTCAAATGGC+AGG | + | chr4_3:47444454-47444473 | Msa0643940:intron | 50.0% | |
| TCCGAACCACTGCATTCCAA+TGG | + | chr4_3:47444923-47444942 | Msa0643940:intron | 50.0% | |
| GCCATTGGAATGCAGTGGTT+CGG | - | chr4_3:47444927-47444946 | None:intergenic | 50.0% | |
| ACGGGGCTTGTAATAGCCAT+TGG | - | chr4_3:47444942-47444961 | None:intergenic | 50.0% | |
| TTTCCAACTAGGATCGTCGC+TGG | + | chr4_3:47445439-47445458 | Msa0643940:CDS | 50.0% | |
| ATTCCAGCGACGATCCTAGT+TGG | - | chr4_3:47445445-47445464 | None:intergenic | 50.0% | |
| GGATCGTCGCTGGAATTTCA+AGG | + | chr4_3:47445449-47445468 | Msa0643940:CDS | 50.0% | |
| TAGGTTGCTGCCATGTTACC+TGG | + | chr4_3:47445590-47445609 | Msa0643940:intron | 50.0% | |
| GGAAAGAGTCTTCTGCCATG+GGG | + | chr4_3:47445633-47445652 | Msa0643940:intron | 50.0% | |
| GAAAGAGTCTTCTGCCATGG+GGG | + | chr4_3:47445634-47445653 | Msa0643940:intron | 50.0% | |
| GGCTAAATCTGTTGCAGTGG+AGG | + | chr4_3:47445871-47445890 | Msa0643940:CDS | 50.0% | |
| TTGAGGACCTCCAAGGGATT+TGG | + | chr4_3:47446278-47446297 | Msa0643940:intron | 50.0% | |
| GTCTTCACCAAATCCCTTGG+AGG | - | chr4_3:47446288-47446307 | None:intergenic | 50.0% | |
| TGCAGCGACTATGCCAATGA+CGG | - | chr4_3:47446462-47446481 | None:intergenic | 50.0% | |
| CAGTAGTAGTCGGATACCCA+GGG | - | chr4_3:47447047-47447066 | None:intergenic | 50.0% | |
| TCAGTAGTAGTCGGATACCC+AGG | - | chr4_3:47447048-47447067 | None:intergenic | 50.0% | |
| CAACTTTACCAGTTGCGCCA+AGG | - | chr4_3:47447301-47447320 | None:intergenic | 50.0% | |
| GCTGCGTACAATGCACCAAA+TGG | + | chr4_3:47447388-47447407 | Msa0643940:intron | 50.0% | |
| GCGTACAATGCACCAAATGG+TGG | + | chr4_3:47447391-47447410 | Msa0643940:intron | 50.0% | |
| CAAGGGACCAACCTTCACAA+CGG | - | chr4_3:47447894-47447913 | None:intergenic | 50.0% | |
| GTTCCTGGAATGCCTGCAAA+TGG | + | chr4_3:47448040-47448059 | Msa0643940:CDS | 50.0% | |
| GATCCATTTGCAGGCATTCC+AGG | - | chr4_3:47448046-47448065 | None:intergenic | 50.0% | |
| ACAAGGTTTCAAGCACGGTC+CGG | + | chr4_3:47448518-47448537 | Msa0643940:intron | 50.0% | |
| GTGTAGGCACCAGAGGAAAT+TGG | + | chr4_3:47448611-47448630 | Msa0643940:intron | 50.0% | |
| CCTCAAGCATAATGCTTGCC+CGG | - | chr4_3:47448838-47448857 | None:intergenic | 50.0% | |
| CGGGCAAGCATTATGCTTGA+GGG | + | chr4_3:47448836-47448855 | Msa0643940:intron | 50.0% | |
| GCAAGCATTATGCTTGAGGG+AGG | + | chr4_3:47448839-47448858 | Msa0643940:intron | 50.0% | |
| GCAAGATTGGAAGGGATGAG+AGG | + | chr4_3:47449075-47449094 | Msa0643940:intron | 50.0% | |
| !! | GAAACTTCAGAGGAGCACCT+TGG | + | chr4_3:47449193-47449212 | Msa0643940:intron | 50.0% |
| CAGTGGAGTTTGGGAAATCC+AGG | + | chr4_3:47449262-47449281 | Msa0643940:intron | 50.0% | |
| GGGAAATCCAGGGTTTGACT+TGG | + | chr4_3:47449273-47449292 | Msa0643940:intron | 50.0% | |
| GGAAATGAGGTGAGGTGAAG+TGG | + | chr4_3:47449776-47449795 | Msa0643940:intron | 50.0% | |
| TGAGGTGAAGTGGACGAAGA+AGG | + | chr4_3:47449786-47449805 | Msa0643940:intron | 50.0% | |
| GAGGTGAAGTGGACGAAGAA+GGG | + | chr4_3:47449787-47449806 | Msa0643940:intron | 50.0% | |
| AGTGGACGAAGAAGGGAGTA+AGG | + | chr4_3:47449794-47449813 | Msa0643940:intron | 50.0% | |
| ACGAAGAAGGGAGTAAGGCA+GGG | + | chr4_3:47449799-47449818 | Msa0643940:intron | 50.0% | |
| TCGTCTGACCGTAAAGAGCA+TGG | + | chr4_3:47449936-47449955 | Msa0643940:intron | 50.0% | |
| TCAACGTGAGTGGGGTATGA+TGG | + | chr4_3:47450162-47450181 | Msa0643940:intron | 50.0% | |
| GACCCATGAATAAGGGTCTG+TGG | + | chr4_3:47450382-47450401 | Msa0643940:intron | 50.0% | |
| GAGGGAATACATGGAGGGAA+TGG | + | chr4_3:47450447-47450466 | Msa0643940:intron | 50.0% | |
| GGAGGGAATGGGAGAAAAAG+GGG | + | chr4_3:47450459-47450478 | Msa0643940:intron | 50.0% | |
| GAGGGAATGGGAGAAAAAGG+GGG | + | chr4_3:47450460-47450479 | Msa0643940:intron | 50.0% | |
| ! | ATTGATGGAGAGCGCACTCT+TGG | + | chr4_3:47452037-47452056 | Msa0643940:CDS | 50.0% |
| GGCTCATTTCGCTGCATATC+TGG | - | chr4_3:47452068-47452087 | None:intergenic | 50.0% | |
| TATGCAGCGAAATGAGCCAG+AGG | + | chr4_3:47452070-47452089 | Msa0643940:CDS | 50.0% | |
| !! | ATTGATGGAGAGGGCACTCT+TGG | + | chr4_3:47452157-47452176 | Msa0643940:CDS | 50.0% |
| AGGGTGTAACTTCAGAACCC+TGG | - | chr4_3:47452322-47452341 | None:intergenic | 50.0% | |
| TAAGCTAGCCCGCACATCTA+AGG | + | chr4_3:47452497-47452516 | Msa0643940:CDS | 50.0% | |
| CTTGCTGAATTTGTCGACGC+AGG | + | chr4_3:47452647-47452666 | Msa0643940:intron | 50.0% | |
| GCTGTGGTTGTAAATGTGCG+TGG | + | chr4_3:47452707-47452726 | Msa0643940:CDS | 50.0% | |
| GGTTGTAAATGTGCGTGGAG+AGG | + | chr4_3:47452712-47452731 | Msa0643940:CDS | 50.0% | |
| AATGTGCGTGGAGAGGAGAT+TGG | + | chr4_3:47452719-47452738 | Msa0643940:CDS | 50.0% | |
| CGTGGAGAGGAGATTGGTAA+AGG | + | chr4_3:47452725-47452744 | Msa0643940:CDS | 50.0% | |
| !! | TAGGTGCCATGAGAGTGTTG+TGG | + | chr4_3:47452906-47452925 | Msa0643940:CDS | 50.0% |
| !! | AGGTGCCATGAGAGTGTTGT+GGG | + | chr4_3:47452907-47452926 | Msa0643940:CDS | 50.0% |
| CGAATCCCACAACACTCTCA+TGG | - | chr4_3:47452915-47452934 | None:intergenic | 50.0% | |
| TGAGTTTGCACTCGTGCTGC+AGG | + | chr4_3:47442740-47442759 | Msa0643940:intron | 55.0% | |
| CTCGCAACAAACGCGACATC+TGG | + | chr4_3:47444973-47444992 | Msa0643940:intron | 55.0% | |
| GTTGCTGCCATGTTACCTGG+TGG | + | chr4_3:47445593-47445612 | Msa0643940:intron | 55.0% | |
| AGTCTTCTGCCATGGGGGTA+AGG | + | chr4_3:47445639-47445658 | Msa0643940:intron | 55.0% | |
| AAAACCCAGCCTTACCCCCA+TGG | - | chr4_3:47445651-47445670 | None:intergenic | 55.0% | |
| ATGTGGGAAATTGCGGGTGC+TGG | + | chr4_3:47446774-47446793 | Msa0643940:intron | 55.0% | |
| TGTGGGAAATTGCGGGTGCT+GGG | + | chr4_3:47446775-47446794 | Msa0643940:intron | 55.0% | |
| !! | AAATTGCGGGTGCTGGGTGT+AGG | + | chr4_3:47446781-47446800 | Msa0643940:intron | 55.0% |
| !! | AATTGCGGGTGCTGGGTGTA+GGG | + | chr4_3:47446782-47446801 | Msa0643940:intron | 55.0% |
| AAGGTCACGGGTTCAAGTCC+TGG | + | chr4_3:47447336-47447355 | Msa0643940:intron | 55.0% | |
| CTAGAGCTCCCGCATATGCA+GGG | - | chr4_3:47447431-47447450 | None:intergenic | 55.0% | |
| ACTAGAGCTCCCGCATATGC+AGG | - | chr4_3:47447432-47447451 | None:intergenic | 55.0% | |
| TCAAGCACGGTCCGGAACAT+AGG | + | chr4_3:47448526-47448545 | Msa0643940:intron | 55.0% | |
| CGGTCCGGAACATAGGTTCA+TGG | + | chr4_3:47448533-47448552 | Msa0643940:intron | 55.0% | |
| AGAGGTTGTGTAGGCACCAG+AGG | + | chr4_3:47448604-47448623 | Msa0643940:intron | 55.0% | |
| CCGGGCAAGCATTATGCTTG+AGG | + | chr4_3:47448835-47448854 | Msa0643940:intron | 55.0% | |
| GACGAAGAAGGGAGTAAGGC+AGG | + | chr4_3:47449798-47449817 | Msa0643940:intron | 55.0% | |
| AAGGGCTATGCGGCAATGAG+TGG | + | chr4_3:47450492-47450511 | Msa0643940:intron | 55.0% | |
| TATGCGGCAATGAGTGGTGG+TGG | + | chr4_3:47450498-47450517 | Msa0643940:intron | 55.0% | |
| GCTGCATTTCGCTGCATCTC+TGG | - | chr4_3:47452188-47452207 | None:intergenic | 55.0% | |
| GAGTCGGAGGACACTCTTAC+TGG | - | chr4_3:47452552-47452571 | None:intergenic | 55.0% | |
| ACCATCTCGCAGCGGTGAAC+AGG | + | chr4_3:47441784-47441803 | Msa0643940:CDS | 60.0% | |
| TCGTCTCTCCCCCCTCAAGT+TGG | + | chr4_3:47444110-47444129 | Msa0643940:intron | 60.0% | |
| TTCTGCCATGGGGGTAAGGC+TGG | + | chr4_3:47445643-47445662 | Msa0643940:intron | 60.0% | |
| TCTGCCATGGGGGTAAGGCT+GGG | + | chr4_3:47445644-47445663 | Msa0643940:intron | 60.0% | |
| AGGGGTAACCTTGGCGCAAC+TGG | + | chr4_3:47447290-47447309 | Msa0643940:intron | 60.0% | |
| ! | CAAATGGTGGGACCCCTTCC+CGG | + | chr4_3:47447404-47447423 | Msa0643940:intron | 60.0% |
| CATATGCAGGGTCCGGGAAG+GGG | - | chr4_3:47447419-47447438 | None:intergenic | 60.0% | |
| GCATATGCAGGGTCCGGGAA+GGG | - | chr4_3:47447420-47447439 | None:intergenic | 60.0% | |
| CTTCCCGGACCCTGCATATG+CGG | + | chr4_3:47447419-47447438 | Msa0643940:intron | 60.0% | |
| TTCCCGGACCCTGCATATGC+GGG | + | chr4_3:47447420-47447439 | Msa0643940:intron | 60.0% | |
| ! | ATGCGGGAGCTCTAGTGCAC+CGG | + | chr4_3:47447436-47447455 | Msa0643940:intron | 60.0% |
| CATGTTCCCGGCCGTTGTGA+AGG | + | chr4_3:47447880-47447899 | Msa0643940:CDS | 60.0% | |
| TTCCCGGCCGTTGTGAAGGT+TGG | + | chr4_3:47447884-47447903 | Msa0643940:intron | 60.0% | |
| GACCAACCTTCACAACGGCC+GGG | - | chr4_3:47447889-47447908 | None:intergenic | 60.0% | |
| GGACCAACCTTCACAACGGC+CGG | - | chr4_3:47447890-47447909 | None:intergenic | 60.0% | |
| GCACCTTGGAGCTGCAGTGA+AGG | + | chr4_3:47449207-47449226 | Msa0643940:intron | 60.0% | |
| CCACCTTCACTGCAGCTCCA+AGG | - | chr4_3:47449213-47449232 | None:intergenic | 60.0% | |
| CCTTGGAGCTGCAGTGAAGG+TGG | + | chr4_3:47449210-47449229 | Msa0643940:intron | 60.0% | |
| GGCTATGCGGCAATGAGTGG+TGG | + | chr4_3:47450495-47450514 | Msa0643940:intron | 60.0% | |
| !! | CGGCAATGAGTGGTGGTGGT+GGG | + | chr4_3:47450502-47450521 | Msa0643940:intron | 60.0% |
| !! | GGCAATGAGTGGTGGTGGTG+GGG | + | chr4_3:47450503-47450522 | Msa0643940:intron | 60.0% |
| GCCTGTTCACCGCTGCGAGA+TGG | - | chr4_3:47441788-47441807 | None:intergenic | 65.0% | |
| CGGGAAGGGGTCCCACCATT+TGG | - | chr4_3:47447406-47447425 | None:intergenic | 65.0% | |
| CGCATATGCAGGGTCCGGGA+AGG | - | chr4_3:47447421-47447440 | None:intergenic | 65.0% | |
| CTCCCGCATATGCAGGGTCC+GGG | - | chr4_3:47447425-47447444 | None:intergenic | 65.0% | |
| GCTCCCGCATATGCAGGGTC+CGG | - | chr4_3:47447426-47447445 | None:intergenic | 65.0% | |
| ! | TGCGGGAGCTCTAGTGCACC+GGG | + | chr4_3:47447437-47447456 | Msa0643940:intron | 65.0% |
| !! | GCGGCAATGAGTGGTGGTGG+TGG | + | chr4_3:47450501-47450520 | Msa0643940:intron | 65.0% |
| !! | GCGGGTGCTGGGTGTAGGGA+TGG | + | chr4_3:47446786-47446805 | Msa0643940:intron | 70.0% |
| Chromosome | Type | Strat | End | Strand | Name |
|---|---|---|---|---|---|
| chr4_3 | gene | 47441764 | 47453264 | 47441764 | ID=Msa0643940;Name=Msa0643940 |
| chr4_3 | mRNA | 47441764 | 47453264 | 47441764 | ID=Msa0643940-mRNA-1;Parent=Msa0643940;Name=Msa0643940-mRNA-1;_AED=0.07;_eAED=0.08;_QI=0|0.93|0.94|1|1|1|17|300|933 |
| chr4_3 | exon | 47441764 | 47441826 | 47441764 | ID=Msa0643940-mRNA-1:exon:11216;Parent=Msa0643940-mRNA-1 |
| chr4_3 | exon | 47441920 | 47442045 | 47441920 | ID=Msa0643940-mRNA-1:exon:11217;Parent=Msa0643940-mRNA-1 |
| chr4_3 | exon | 47442123 | 47442281 | 47442123 | ID=Msa0643940-mRNA-1:exon:11218;Parent=Msa0643940-mRNA-1 |
| chr4_3 | exon | 47442579 | 47442662 | 47442579 | ID=Msa0643940-mRNA-1:exon:11219;Parent=Msa0643940-mRNA-1 |
| chr4_3 | exon | 47442762 | 47442890 | 47442762 | ID=Msa0643940-mRNA-1:exon:11220;Parent=Msa0643940-mRNA-1 |
| chr4_3 | exon | 47443261 | 47443479 | 47443261 | ID=Msa0643940-mRNA-1:exon:11221;Parent=Msa0643940-mRNA-1 |
| chr4_3 | exon | 47445370 | 47445495 | 47445370 | ID=Msa0643940-mRNA-1:exon:11222;Parent=Msa0643940-mRNA-1 |
| chr4_3 | exon | 47445797 | 47445892 | 47445797 | ID=Msa0643940-mRNA-1:exon:11223;Parent=Msa0643940-mRNA-1 |
| chr4_3 | exon | 47447009 | 47447167 | 47447009 | ID=Msa0643940-mRNA-1:exon:11224;Parent=Msa0643940-mRNA-1 |
| chr4_3 | exon | 47447610 | 47447901 | 47447610 | ID=Msa0643940-mRNA-1:exon:11225;Parent=Msa0643940-mRNA-1 |
| chr4_3 | exon | 47448012 | 47448137 | 47448012 | ID=Msa0643940-mRNA-1:exon:11226;Parent=Msa0643940-mRNA-1 |
| chr4_3 | exon | 47448216 | 47448285 | 47448216 | ID=Msa0643940-mRNA-1:exon:11227;Parent=Msa0643940-mRNA-1 |
| chr4_3 | exon | 47451126 | 47451189 | 47451126 | ID=Msa0643940-mRNA-1:exon:11228;Parent=Msa0643940-mRNA-1 |
| chr4_3 | exon | 47451594 | 47452244 | 47451594 | ID=Msa0643940-mRNA-1:exon:11229;Parent=Msa0643940-mRNA-1 |
| chr4_3 | exon | 47452323 | 47452357 | 47452323 | ID=Msa0643940-mRNA-1:exon:11230;Parent=Msa0643940-mRNA-1 |
| chr4_3 | exon | 47452479 | 47452585 | 47452479 | ID=Msa0643940-mRNA-1:exon:11231;Parent=Msa0643940-mRNA-1 |
| chr4_3 | exon | 47452669 | 47453264 | 47452669 | ID=Msa0643940-mRNA-1:exon:11232;Parent=Msa0643940-mRNA-1 |
| chr4_3 | CDS | 47441764 | 47441826 | 47441764 | ID=Msa0643940-mRNA-1:cds;Parent=Msa0643940-mRNA-1 |
| chr4_3 | CDS | 47441920 | 47442045 | 47441920 | ID=Msa0643940-mRNA-1:cds;Parent=Msa0643940-mRNA-1 |
| chr4_3 | CDS | 47442123 | 47442281 | 47442123 | ID=Msa0643940-mRNA-1:cds;Parent=Msa0643940-mRNA-1 |
| chr4_3 | CDS | 47442579 | 47442662 | 47442579 | ID=Msa0643940-mRNA-1:cds;Parent=Msa0643940-mRNA-1 |
| chr4_3 | CDS | 47442762 | 47442890 | 47442762 | ID=Msa0643940-mRNA-1:cds;Parent=Msa0643940-mRNA-1 |
| chr4_3 | CDS | 47443261 | 47443479 | 47443261 | ID=Msa0643940-mRNA-1:cds;Parent=Msa0643940-mRNA-1 |
| chr4_3 | CDS | 47445370 | 47445495 | 47445370 | ID=Msa0643940-mRNA-1:cds;Parent=Msa0643940-mRNA-1 |
| chr4_3 | CDS | 47445797 | 47445892 | 47445797 | ID=Msa0643940-mRNA-1:cds;Parent=Msa0643940-mRNA-1 |
| chr4_3 | CDS | 47447009 | 47447167 | 47447009 | ID=Msa0643940-mRNA-1:cds;Parent=Msa0643940-mRNA-1 |
| chr4_3 | CDS | 47447610 | 47447901 | 47447610 | ID=Msa0643940-mRNA-1:cds;Parent=Msa0643940-mRNA-1 |
| chr4_3 | CDS | 47448012 | 47448137 | 47448012 | ID=Msa0643940-mRNA-1:cds;Parent=Msa0643940-mRNA-1 |
| chr4_3 | CDS | 47448216 | 47448285 | 47448216 | ID=Msa0643940-mRNA-1:cds;Parent=Msa0643940-mRNA-1 |
| chr4_3 | CDS | 47451126 | 47451189 | 47451126 | ID=Msa0643940-mRNA-1:cds;Parent=Msa0643940-mRNA-1 |
| chr4_3 | CDS | 47451594 | 47452244 | 47451594 | ID=Msa0643940-mRNA-1:cds;Parent=Msa0643940-mRNA-1 |
| chr4_3 | CDS | 47452323 | 47452357 | 47452323 | ID=Msa0643940-mRNA-1:cds;Parent=Msa0643940-mRNA-1 |
| chr4_3 | CDS | 47452479 | 47452585 | 47452479 | ID=Msa0643940-mRNA-1:cds;Parent=Msa0643940-mRNA-1 |
| chr4_3 | CDS | 47452669 | 47452964 | 47452669 | ID=Msa0643940-mRNA-1:cds;Parent=Msa0643940-mRNA-1 |
| chr4_3 | three_prime_UTR | 47452965 | 47453264 | 47452965 | ID=Msa0643940-mRNA-1:three_prime_utr;Parent=Msa0643940-mRNA-1 |
| Gene Sequence |
| Protein sequence |
