AlfalfaGEDB Alfalfa Gene Editing Database

M. sativa cultivar zhongmu-4 / Msa1296410


Query id Subject id identity % alignment length mismatches gap openings q. start q. end s. start s. end e-value bit score
Msa1296410 MtrunA17_Chr4g0053121 92.562 1089 71 3 1 1089 1 1079 0.0 1940
Msa1296410 MtrunA17_Chr5g0401911 48.098 736 247 16 349 1077 231 838 0.0 572
Msa1296410 MtrunA17_Chr5g0401911 62.185 238 89 1 1 238 1 237 6.15e-82 285
Msa1296410 MtrunA17_Chr4g0044561 34.324 1110 589 27 1 1083 1 997 2.19e-146 464
Msa1296410 MtrunA17_Chr3g0142411 40.961 437 239 6 43 463 90 523 5.35e-77 275
Msa1296410 MtrunA17_Chr1g0156371 36.197 547 286 12 1 494 1 537 6.10e-75 269
Msa1296410 MtrunA17_Chr5g0405291 35.050 505 254 11 1 458 1 478 5.19e-60 220
Msa1296410 MtrunA17_Chr8g0384881 37.417 302 129 5 1 271 1 273 5.00e-41 161
Msa1296410 MtrunA17_Chr1g0159951 35.983 239 128 2 33 271 130 343 1.07e-31 134
Msa1296410 MtrunA17_Chr3g0130811 37.190 242 113 5 38 271 47 257 3.69e-30 128
Query id Subject id identity % alignment length mismatches gap openings q. start q. end s. start s. end e-value bit score
Msa1296410 AT2G23360.1 45.539 751 322 13 1 741 1 674 0.0 559
Msa1296410 AT2G23360.1 35.938 192 84 5 913 1087 727 896 1.24e-18 92.4
Msa1296410 AT1G19835.6 38.788 495 259 9 1 457 1 489 7.60e-78 276
Msa1296410 AT1G19835.5 38.788 495 259 9 1 457 1 489 7.60e-78 276
Msa1296410 AT1G19835.3 38.788 495 259 9 1 457 1 489 7.60e-78 276
Msa1296410 AT1G19835.1 38.788 495 259 9 1 457 1 489 7.60e-78 276
Msa1296410 AT1G19835.4 38.788 495 259 9 1 457 1 489 7.60e-78 276
Msa1296410 AT1G19835.2 38.788 495 259 9 1 457 1 489 7.60e-78 276
Msa1296410 AT1G47900.3 28.148 945 555 25 33 945 101 953 1.54e-74 268
Msa1296410 AT1G47900.1 28.148 945 555 25 33 945 101 953 1.54e-74 268
Msa1296410 AT1G47900.2 37.727 440 254 6 33 457 101 535 2.77e-66 243
Msa1296410 AT4G36120.2 35.141 498 276 10 1 454 1 495 6.11e-62 229
Msa1296410 AT4G36120.1 35.141 498 276 10 1 454 1 495 6.11e-62 229
Msa1296410 AT1G77580.4 37.500 232 110 2 39 270 20 216 3.02e-33 138
Msa1296410 AT1G77580.2 37.500 232 110 2 39 270 54 250 3.35e-33 139
Msa1296410 AT1G77580.3 37.500 232 110 2 39 270 54 250 3.35e-33 139
Msa1296410 AT1G77580.1 39.224 232 106 3 39 270 20 216 3.78e-33 137
Msa1296410 AT3G05270.3 30.719 306 173 4 1 294 1 279 3.92e-31 130
Msa1296410 AT3G05270.2 30.719 306 173 4 1 294 1 279 3.92e-31 130
Msa1296410 AT3G05270.1 30.719 306 173 4 1 294 1 279 3.92e-31 130
Msa1296410 AT3G19370.3 30.102 392 165 10 155 545 143 426 4.97e-31 131
Msa1296410 AT3G19370.3 30.986 284 128 9 802 1082 480 698 1.23e-15 82.4
Msa1296410 AT3G19370.1 30.102 392 165 10 155 545 143 426 4.97e-31 131
Msa1296410 AT3G19370.1 30.986 284 128 9 802 1082 480 698 1.23e-15 82.4
Msa1296410 AT3G19370.2 30.102 392 165 10 155 545 143 426 4.97e-31 131
Msa1296410 AT3G19370.2 30.986 284 128 9 802 1082 480 698 1.23e-15 82.4
Msa1296410 AT1G21810.3 37.799 209 88 4 62 270 14 180 2.92e-25 112
Msa1296410 AT1G21810.1 37.799 209 88 4 62 270 14 180 2.92e-25 112

Find 222 sgRNAs with CRISPR-Local

Find 375 sgRNAs with CRISPR-GE


CRISPR-Local

CRISPR-Local
sgRNA_sequence on_target_score Position Region
TGCTGTTTGTTTCTCTTTAT+TGG 0.078910 8_3:+55813336 None:intergenic
TTCGCAATGGCTTGTCTTTC+TGG 0.087478 8_3:+55812282 None:intergenic
CTGCAATAACATTGTCAAAA+AGG 0.211384 8_3:+55811105 None:intergenic
TTACATTCTTCTTAGCATTA+TGG 0.247487 8_3:-55815641 Msa1296410:exon
CAAAGTATCGATTCTTCTAT+TGG 0.248764 8_3:+55814148 None:intergenic
GTTTGTGGAAGAAGTTATTA+TGG 0.255118 8_3:-55810758 Msa1296410:CDS
CAAATTCTCTCTCTTCATTT+CGG 0.261599 8_3:+55814417 None:intergenic
GTCCTTAACGGATCAACTTT+TGG 0.276773 8_3:-55812686 Msa1296410:CDS
AGAGGTCGGTCTCAAGGTTT+TGG 0.284127 8_3:-55812524 Msa1296410:CDS
TTCCACAAACTTCCGCTTCC+CGG 0.295489 8_3:+55810771 None:intergenic
AATCTCCCTTCAAAAGAAAA+TGG 0.309230 8_3:-55815553 Msa1296410:CDS
TGTCTTTCTGGTTAATATCA+TGG 0.309747 8_3:+55812294 None:intergenic
CAATCCTTAAAAGAATCTTA+TGG 0.311961 8_3:-55812625 Msa1296410:CDS
AGCGAAAGTGAAGCAGAGTT+TGG 0.313969 8_3:-55812937 Msa1296410:CDS
TGATCCTTCAAATAACTCTT+TGG 0.316192 8_3:-55813400 Msa1296410:CDS
CGAAATGAAGAGAGAGAATT+TGG 0.316984 8_3:-55814416 Msa1296410:CDS
TTGGCATCAATGTCTGATAT+TGG 0.327469 8_3:-55813924 Msa1296410:CDS
TCAATCTCATATCTCTTTAG+AGG 0.331509 8_3:-55816119 Msa1296410:intron
TAACATTCCCAGTTGGCTTC+AGG 0.333343 8_3:-55813574 Msa1296410:CDS
TCAGCTGCTTCCCAAGATTA+AGG 0.339508 8_3:+55811156 None:intergenic
CATGGATGACTTTGTTGAAA+TGG 0.341756 8_3:-55813772 Msa1296410:CDS
TAACCTTTGTGAGTTCTCTT+TGG 0.342154 8_3:-55813943 Msa1296410:CDS
TCTTGCTGATAAAGAAGAAT+TGG 0.350215 8_3:-55815136 Msa1296410:CDS
AGTTATCCGTGACAAGTAAA+AGG 0.351743 8_3:-55814637 Msa1296410:CDS
CAAGAAACCATCCTTAATCT+TGG 0.356322 8_3:-55811167 Msa1296410:CDS
GTGTCAGAGATTGCGCCTTC+TGG 0.356686 8_3:-55814321 Msa1296410:CDS
GTACCCTCAGTAAATAATTC+AGG 0.357209 8_3:-55813198 Msa1296410:CDS
TACTACATCCTGAAGCCAAC+TGG 0.357862 8_3:+55813566 None:intergenic
TTCTGCATTGATTTCAGATT+CGG 0.358960 8_3:-55813865 Msa1296410:CDS
CCGCTTCCCGGTTTCTTAGT+AGG 0.365002 8_3:+55810783 None:intergenic
AATCTAGATCCGTGCGTCTT+TGG 0.365024 8_3:-55813456 Msa1296410:CDS
AAAGCATTACTCTTGAGAAT+TGG 0.371530 8_3:+55814051 None:intergenic
TCCGATCTCACCACCATTCC+AGG 0.374557 8_3:-55810918 Msa1296410:CDS
ATCTTGATTCACGGCATAAA+GGG 0.376834 8_3:-55812558 Msa1296410:CDS
GATCTTGATTCACGGCATAA+AGG 0.378099 8_3:-55812559 Msa1296410:CDS
AAAGTATCGATTCTTCTATT+GGG 0.379720 8_3:+55814149 None:intergenic
ACTTGTTCCTTCTTATTTCA+AGG 0.384785 8_3:+55814225 None:intergenic
CTATCAAGAAACAATTTGAT+TGG 0.384907 8_3:-55812972 Msa1296410:CDS
TCTTCACTTGACAGTTCTCC+TGG 0.388800 8_3:-55814176 Msa1296410:CDS
TGAAGAAAGAGTAGCCCATT+TGG 0.391774 8_3:-55814786 Msa1296410:CDS
ATGAAAATGTAAATGATGTT+TGG 0.396016 8_3:+55816216 None:intergenic
AGGTCTGGATGAAGCTTTGC+GGG 0.398196 8_3:-55814822 Msa1296410:CDS
TTCCAAAAGTTGATCCGTTA+AGG 0.403468 8_3:+55812684 None:intergenic
TTCATAACTTTCAGGGGAGC+AGG 0.404170 8_3:+55811023 None:intergenic
GGAGTCACGGTCACTTACTT+TGG 0.404277 8_3:+55810938 None:intergenic
CATTGTACCTACTAAGAAAC+CGG 0.419244 8_3:-55810790 Msa1296410:CDS
GACTACCCCTGATCACATTT+CGG 0.431865 8_3:-55813646 Msa1296410:CDS
TGCGCCTTCTGGTTCGGAAA+CGG 0.432770 8_3:-55814310 Msa1296410:CDS
TCATGGTTCGAGCCCTCCTT+TGG 0.433128 8_3:+55812311 None:intergenic
CCTCAAGTAACTACTTCAAA+TGG 0.436735 8_3:-55812850 Msa1296410:CDS
CCTTCAGAGCTCCATCCAAA+TGG 0.438475 8_3:+55814771 None:intergenic
GGTGGTGGCGGATGTGGTAC+TGG 0.439445 8_3:+55811073 None:intergenic
GTCACTTACTTTGGAAACCT+TGG 0.443153 8_3:+55810947 None:intergenic
CAGTGTTACTGCTAATGATT+TGG 0.444242 8_3:-55810838 Msa1296410:CDS
TTTGGTTCCGACAAAGTCTC+TGG 0.446495 8_3:-55813438 Msa1296410:CDS
GAGAAGTCCGAAATGTGATC+AGG 0.446564 8_3:+55813639 None:intergenic
AAAGAAGTTGATGAGATCAA+TGG 0.447443 8_3:-55813693 Msa1296410:CDS
AGAGATTGCGCCTTCTGGTT+CGG 0.447959 8_3:-55814316 Msa1296410:CDS
CATTGTAACTTCTAAGAAAC+CGG 0.448338 8_3:-55810814 Msa1296410:CDS
TCAGGATGTTTCTTGTATGA+AGG 0.449394 8_3:-55812998 Msa1296410:CDS
CTGACACTCTGATTCTAACT+TGG 0.449595 8_3:+55814337 None:intergenic
GCGAAAGTGAAGCAGAGTTT+GGG 0.451171 8_3:-55812936 Msa1296410:CDS
AGCAAAAGTTGAAGTGTTGT+CGG 0.451282 8_3:-55814852 Msa1296410:CDS
GTCAGTAATATTTACATCAC+TGG 0.452498 8_3:+55813365 None:intergenic
TGATAGGATTGAGTCCTTAA+CGG 0.453872 8_3:-55812698 Msa1296410:CDS
GAGTTGCAATTCAACACATC+TGG 0.456191 8_3:+55812450 None:intergenic
AACTAACAACAGCTTTGGAT+TGG 0.456338 8_3:-55813044 Msa1296410:CDS
TGAAGAACTAACAACAGCTT+TGG 0.456722 8_3:-55813049 Msa1296410:CDS
GAAGACCTGAGTAAGTCAAT+AGG 0.458201 8_3:-55813306 Msa1296410:CDS
ATTAGAAAATAAGCTTGCTT+CGG 0.458274 8_3:-55815097 Msa1296410:CDS
AAGGGAAAGAAGTGAAAAGA+TGG 0.459864 8_3:+55816317 None:intergenic
GTTAAACTCAACTAGTTCAA+TGG 0.460981 8_3:-55814204 Msa1296410:CDS
TATCAAGAAACAATTTGATT+GGG 0.464261 8_3:-55812971 Msa1296410:CDS
TGCGACTTTCAAGTGTTCAA+TGG 0.464365 8_3:+55810699 None:intergenic
TCCAGAGGTTGTATAATGCC+TGG 0.464954 8_3:+55810900 None:intergenic
AAGAAACCATCCTTAATCTT+GGG 0.465020 8_3:-55811166 Msa1296410:CDS
CAACAGAGAGAGTGTGTGTT+TGG 0.466141 8_3:+55816280 None:intergenic
CGTGATGGTGGTGGCGGATG+TGG 0.469826 8_3:+55811067 None:intergenic
TGGGAAGCAGCTGAGGTCAT+TGG 0.471135 8_3:-55811147 Msa1296410:CDS
GTGTGTGTTTGGTGAGAGAA+AGG 0.471339 8_3:+55816291 None:intergenic
GATCAATGCTGAATCTCAAA+AGG 0.476356 8_3:-55812752 Msa1296410:CDS
AATTGCAACTCCAGCTTGAA+AGG 0.476438 8_3:-55812438 Msa1296410:intron
TCCAGGCATTATACAACCTC+TGG 0.478551 8_3:-55810901 Msa1296410:CDS
CTTCAGAAGTGGAAAACAAA+AGG 0.479195 8_3:-55813838 Msa1296410:CDS
ACCACCAAAGAGTTATTTGA+AGG 0.479471 8_3:+55813396 None:intergenic
TGAAGCTTTGCGGGACAGAT+TGG 0.480204 8_3:-55814813 Msa1296410:CDS
AAAGTCTCTGGTCATATTGA+AGG 0.480911 8_3:-55813426 Msa1296410:CDS
CGGAAACGGTTACCAGGTCC+TGG 0.484770 8_3:-55814296 Msa1296410:CDS
ATCTTCCCTTGATGAACTAA+AGG 0.486259 8_3:-55813598 Msa1296410:CDS
CTTGTTCCTTCTTATTTCAA+GGG 0.487122 8_3:+55814226 None:intergenic
TCATGGTCCTGCAGAAGCAT+TGG 0.487131 8_3:-55813813 Msa1296410:CDS
TGACGGAGTGAGTGTGTTGT+TGG 0.487446 8_3:+55816369 None:intergenic
GAAGCAGAGTTTGGGATGAT+AGG 0.487695 8_3:-55812928 Msa1296410:CDS
TTAGCAGTAACACTGTCATC+TGG 0.489817 8_3:+55810846 None:intergenic
AGTGAAGACCAGACACTAAG+AGG 0.490486 8_3:+55810550 None:intergenic
GTGGAAAACAAAAGGAATCA+TGG 0.494775 8_3:-55813830 Msa1296410:CDS
TGTTATCCTTTAGTTCATCA+AGG 0.494969 8_3:+55813592 None:intergenic
AGAATATTAGAGTAGCTTTG+AGG 0.496510 8_3:-55813488 Msa1296410:CDS
TGAAGCTCCAATGCTTCTGC+AGG 0.497457 8_3:+55813806 None:intergenic
AGAAGCATTATCTTTCTCAA+TGG 0.498267 8_3:+55814481 None:intergenic
GTTACCAGGTCCTGGTTCCC+TGG 0.500382 8_3:-55814288 Msa1296410:CDS
TTGGTGAGAGAAAGGGAAAA+GGG 0.502134 8_3:+55816299 None:intergenic
AACCGGGAAGCGGAAGTTTG+TGG 0.503170 8_3:-55810773 Msa1296410:CDS
ACTTTCAGGGGAGCAGGGAT+AGG 0.504663 8_3:+55811029 None:intergenic
CTGGTTCGGAAACGGTTACC+AGG 0.505039 8_3:-55814302 Msa1296410:CDS
AATAATTCAGGAATGCCAAC+GGG 0.505739 8_3:-55813186 Msa1296410:CDS
GAGATTCCCTTGAAATAAGA+AGG 0.508635 8_3:-55814232 Msa1296410:CDS
AACAGCCGCTTCAGAAAAGT+TGG 0.508979 8_3:-55811198 Msa1296410:CDS
CCATTTGGATGGAGCTCTGA+AGG 0.512295 8_3:-55814771 Msa1296410:CDS
CTTCAGAGCTCCATCCAAAT+GGG 0.513136 8_3:+55814772 None:intergenic
CGTTAAAAGATTCCCTAAGT+AGG 0.514403 8_3:-55814088 Msa1296410:CDS
AATACGTACTTACTGAAGAA+AGG 0.516486 8_3:-55810649 Msa1296410:three_prime_UTR
CCTTTCCTATTGACTTACTC+AGG 0.517300 8_3:+55813301 None:intergenic
TTTGGTGAGAGAAAGGGAAA+AGG 0.519485 8_3:+55816298 None:intergenic
TGTTTCTCTTTATTGGTGAG+AGG 0.519827 8_3:+55813343 None:intergenic
AGACGTGTCCTCTTAGTGTC+TGG 0.521081 8_3:-55810558 Msa1296410:three_prime_UTR
GTGTGTTATGATTTACTGAA+TGG 0.521589 8_3:-55813096 Msa1296410:CDS
AGCTTCAGACATAAATCTCA+TGG 0.522285 8_3:-55813790 Msa1296410:CDS
TCAATGGCTTCTCAGAAACT+AGG 0.522844 8_3:-55813677 Msa1296410:CDS
AAACATGGAAACTGTTCTGC+GGG 0.522978 8_3:+55812874 None:intergenic
ATCCGTGACAAGTAAAAGGC+TGG 0.523603 8_3:-55814633 Msa1296410:CDS
AAGATGGGAAAGTGAAGAGT+GGG 0.524676 8_3:+55816333 None:intergenic
CGATTTGTTCGAGAAGAACA+AGG 0.524891 8_3:-55814731 Msa1296410:CDS
AGCTTCAATCAGCTACTGAT+AGG 0.524963 8_3:-55812714 Msa1296410:CDS
ATAGGTCTTACCTTTCAAGC+TGG 0.525592 8_3:+55812428 None:intergenic
GTGGCGGATGTGGTACTGGT+AGG 0.526670 8_3:+55811077 None:intergenic
TCCTTCAAATAACTCTTTGG+TGG 0.527792 8_3:-55813397 Msa1296410:CDS
AATATGACCAGAGACTTTGT+CGG 0.528015 8_3:+55813431 None:intergenic
AAGAATCAACTTGCCTGCTG+TGG 0.528599 8_3:-55813262 Msa1296410:CDS
TGAAATCAGATCTTGATTCA+CGG 0.529274 8_3:-55812567 Msa1296410:CDS
AAAAGGGCTGCATCCTTTGG+TGG 0.530109 8_3:+55811122 None:intergenic
CATAATGAAGAATCATCTAA+AGG 0.532662 8_3:-55813993 Msa1296410:CDS
GAGAAAGACACTGAAATCTC+TGG 0.532861 8_3:-55813726 Msa1296410:CDS
CTGCTTCCCAAGATTAAGGA+TGG 0.533937 8_3:+55811160 None:intergenic
AGGAATGCCAACGGGCTACA+TGG 0.535263 8_3:-55813178 Msa1296410:CDS
GAAAGAGTAGCCCATTTGGA+TGG 0.535573 8_3:-55814782 Msa1296410:CDS
GCCTGGAATGGTGGTGAGAT+CGG 0.542225 8_3:+55810917 None:intergenic
TGTTGTCGTGATGGTGGTGG+CGG 0.542398 8_3:+55811061 None:intergenic
ATATTCTCGAGTATATCATC+AGG 0.542580 8_3:+55813504 None:intergenic
ATTCCTGAATTATTTACTGA+GGG 0.542973 8_3:+55813195 None:intergenic
CCGAGTGCTTGAAAAGGAGT+TGG 0.544074 8_3:-55814444 Msa1296410:CDS
GTGTAATTCTAAAGACGAGC+TGG 0.545543 8_3:-55815064 Msa1296410:CDS
TTCGAGAAGAACAAGGGCAA+AGG 0.547361 8_3:-55814724 Msa1296410:CDS
ACTTTCAAGTGTTCAATGGA+AGG 0.547509 8_3:+55810703 None:intergenic
AGGGAAAGAAGTGAAAAGAT+GGG 0.547589 8_3:+55816318 None:intergenic
GATTCGGAGCACTTCAGAAG+TGG 0.547858 8_3:-55813849 Msa1296410:CDS
GTTGTCGGTGAAGCAAGGTC+TGG 0.549630 8_3:-55814837 Msa1296410:CDS
ATTCTTCTATTGGGAGTCCC+AGG 0.550407 8_3:+55814158 None:intergenic
ATTAAAAGAGGTCGGTCTCA+AGG 0.553721 8_3:-55812530 Msa1296410:CDS
TGAGGTCCGAGTGCTTGAAA+AGG 0.553776 8_3:-55814450 Msa1296410:CDS
TTCTTAGTAGGTACAATGGC+CGG 0.554541 8_3:+55810795 None:intergenic
GATTCATGATGCTGTGATGA+AGG 0.557033 8_3:-55814702 Msa1296410:CDS
AGTCTCATCACTTGTGCACA+AGG 0.557335 8_3:+55813221 None:intergenic
TGAATCTCAAAAGGAAACAT+TGG 0.560533 8_3:-55812743 Msa1296410:CDS
TGTTCTCAGCATGCCAAAGG+AGG 0.561256 8_3:-55812324 Msa1296410:intron
TAATGCTTCTCTGACATATG+AGG 0.561537 8_3:-55814468 Msa1296410:CDS
GAGGTCATTGGCTCCACCAA+AGG 0.561831 8_3:-55811135 Msa1296410:CDS
TTTGCCAGGGAACCAGGACC+TGG 0.563279 8_3:+55814284 None:intergenic
CGGTTTCTTAGTAGGTACAA+TGG 0.565201 8_3:+55810791 None:intergenic
TCTAAAGAGATATGAGATTG+AGG 0.565695 8_3:+55816121 None:intergenic
ATTGCACAAGAAGCAGTGGC+AGG 0.569097 8_3:-55815024 Msa1296410:intron
AAGGTCTGGATGAAGCTTTG+CGG 0.572407 8_3:-55814823 Msa1296410:CDS
ACTACATCCTGAAGCCAACT+GGG 0.574852 8_3:+55813567 None:intergenic
CCATTTGAAGTAGTTACTTG+AGG 0.575575 8_3:+55812850 None:intergenic
CTTTCAAGTGTTCAATGGAA+GGG 0.576556 8_3:+55810704 None:intergenic
AAAGATGGGAAAGTGAAGAG+TGG 0.576595 8_3:+55816332 None:intergenic
AGAAGTCCGAAATGTGATCA+GGG 0.576910 8_3:+55813640 None:intergenic
GTTATCCTTTAGTTCATCAA+GGG 0.578574 8_3:+55813593 None:intergenic
CATTCCTGAATTATTTACTG+AGG 0.578669 8_3:+55813194 None:intergenic
ATCTAAAGGTCAAGTTGCTG+TGG 0.578768 8_3:-55813979 Msa1296410:CDS
GAATTATCACAATCCACAGC+AGG 0.579190 8_3:+55813249 None:intergenic
TCAAGAGATGTATTCTGATG+AGG 0.579393 8_3:-55812806 Msa1296410:CDS
TCATAACTTTCAGGGGAGCA+GGG 0.581223 8_3:+55811024 None:intergenic
GGTTAGCTGTGCTGACTCCT+CGG 0.581274 8_3:-55813889 Msa1296410:CDS
CTTCACTTGACAGTTCTCCT+GGG 0.587869 8_3:-55814175 Msa1296410:CDS
GGTGATAGTAAGTGTCGGCT+TGG 0.589706 8_3:+55816431 None:intergenic
AGAATCTTATGGAAAACTTG+AGG 0.592051 8_3:-55812614 Msa1296410:CDS
TTAATCTTGGGAAGCAGCTG+AGG 0.592805 8_3:-55811154 Msa1296410:CDS
GATAAACTTACAGTTCGCAA+TGG 0.595440 8_3:+55812269 None:intergenic
TCTCAAAAGGAAACATTGGA+AGG 0.596127 8_3:-55812739 Msa1296410:CDS
CCTGAGTAAGTCAATAGGAA+AGG 0.596363 8_3:-55813301 Msa1296410:CDS
GTTCTCAGCATGCCAAAGGA+GGG 0.598290 8_3:-55812323 Msa1296410:intron
TGTGTGTTTGGTGAGAGAAA+GGG 0.600796 8_3:+55816292 None:intergenic
CGGTTTCTTAGAAGTTACAA+TGG 0.601137 8_3:+55810815 None:intergenic
TGAAGATGATACTAAATCCA+AGG 0.601228 8_3:-55810964 Msa1296410:CDS
AAAAGAGTGCATGGTTTGGG+AGG 0.602469 8_3:-55814663 Msa1296410:CDS
TAAAGGATAACATTCCCAGT+TGG 0.608418 8_3:-55813581 Msa1296410:CDS
AAAGATAAAATCTTCTCCAG+AGG 0.609414 8_3:+55810885 None:intergenic
GAAGTGTTGTCGGTGAAGCA+AGG 0.611312 8_3:-55814842 Msa1296410:CDS
CCTACTAAGAAACCGGGAAG+CGG 0.611824 8_3:-55810783 Msa1296410:CDS
TGGTGGTGAGATCGGAGTCA+CGG 0.613950 8_3:+55810925 None:intergenic
CTCAAAAGGAAACATTGGAA+GGG 0.614996 8_3:-55812738 Msa1296410:CDS
AAATAATTCAGGAATGCCAA+CGG 0.615232 8_3:-55813187 Msa1296410:CDS
TTGTATAATGCCTGGAATGG+TGG 0.616953 8_3:+55810908 None:intergenic
AAGAGAGAGAATTTGGTCGT+CGG 0.617107 8_3:-55814409 Msa1296410:CDS
TAAAGGGGCGGAATTAAAAG+AGG 0.618771 8_3:-55812542 Msa1296410:CDS
TCTTGATTCACGGCATAAAG+GGG 0.619029 8_3:-55812557 Msa1296410:CDS
TAATGTTCTCAGCATGCCAA+AGG 0.619696 8_3:-55812327 Msa1296410:intron
GTAATATTTACATCACTGGA+TGG 0.620257 8_3:+55813369 None:intergenic
GTAGTTACTTGAGGAAAACA+TGG 0.620760 8_3:+55812859 None:intergenic
TCTCTAATTCTTCACAACTG+TGG 0.621010 8_3:+55812473 None:intergenic
TGGGAGTCAAGAGAAAATGA+CGG 0.622687 8_3:+55816352 None:intergenic
TGAAATCAATGCAGAAGCCG+AGG 0.632280 8_3:+55813872 None:intergenic
TAAAATTGCACAAGAAGCAG+TGG 0.633283 8_3:-55815028 Msa1296410:CDS
TTATGATTTACTGAATGGCA+AGG 0.634162 8_3:-55813091 Msa1296410:CDS
GTCTCATCACTTGTGCACAA+GGG 0.644115 8_3:+55813222 None:intergenic
ACACGGACCATGTAGCCCGT+TGG 0.651352 8_3:+55813171 None:intergenic
GGGGCGGAATTAAAAGAGGT+CGG 0.656076 8_3:-55812538 Msa1296410:CDS
AAAACATGGAAACTGTTCTG+CGG 0.658488 8_3:+55812873 None:intergenic
GATTTGTTCGAGAAGAACAA+GGG 0.659287 8_3:-55814730 Msa1296410:CDS
AAAACAATTGACTCAAGCTG+AGG 0.660596 8_3:-55814537 Msa1296410:CDS
AGGTTGTATAATGCCTGGAA+TGG 0.662462 8_3:+55810905 None:intergenic
TGATATTGGCAGTGATGACA+AGG 0.666015 8_3:-55813910 Msa1296410:CDS
TGATTCACGGCATAAAGGGG+CGG 0.666471 8_3:-55812554 Msa1296410:CDS
CCCTTCAAAAGAAAATGGAG+AGG 0.668455 8_3:-55815548 Msa1296410:intron
TTGTTGGTGAGAACAGAGAG+AGG 0.669117 8_3:+55816385 None:intergenic
TTGTCGGAACCAAAGACGCA+CGG 0.676067 8_3:+55813447 None:intergenic
ATTGTACCTACTAAGAAACC+GGG 0.677949 8_3:-55810789 Msa1296410:CDS
AGGGTGGTGATAGTAAGTGT+CGG 0.685730 8_3:+55816426 None:intergenic
GTAACCGTTTCCGAACCAGA+AGG 0.688384 8_3:+55814306 None:intergenic
GAAGTCCGAAATGTGATCAG+GGG 0.700628 8_3:+55813641 None:intergenic
ATGCCAAAGAGAACTCACAA+AGG 0.713190 8_3:+55813940 None:intergenic

CRISPR-GE

badsite warning sgRNA_sequence Strand Position Region GC_content
!! TCAAAAAAAAAAAAAATAGA+AGG + chr8_3:55810938-55810957 None:intergenic 10.0%
!! AGATAAATAAATGAATAAAA+AGG + chr8_3:55811637-55811656 None:intergenic 10.0%
!! GAAGAAATTAAAAATATTAA+AGG - chr8_3:55814233-55814252 Msa1296410:CDS 10.0%
!!! TGTTTTATAAATTACAAATT+AGG - chr8_3:55814916-55814935 Msa1296410:intron 10.0%
!!! GTTTTATAAATTACAAATTA+GGG - chr8_3:55814917-55814936 Msa1296410:intron 10.0%
!!! TTATCATTTTCCAATTATTA+TGG - chr8_3:55811554-55811573 Msa1296410:intron 15.0%
!! AAATAAATGAATAAAAAGGA+TGG + chr8_3:55811633-55811652 None:intergenic 15.0%
!! TTAATTAGATTGTAAAATGT+AGG - chr8_3:55811771-55811790 Msa1296410:intron 15.0%
!!! TAACTTTTAATTTCTAATTG+AGG - chr8_3:55814646-55814665 Msa1296410:CDS 15.0%
!! GTGTAAAAAGTTGTAAAAAA+GGG + chr8_3:55810610-55810629 None:intergenic 20.0%
!! ATGAAAATGTAAATGATGTT+TGG + chr8_3:55810801-55810820 None:intergenic 20.0%
!!! CAATGTCTTTTATATATGAA+AGG + chr8_3:55810966-55810985 None:intergenic 20.0%
!! TGTTAGTACTATACTTATAA+TGG - chr8_3:55810995-55811014 Msa1296410:CDS 20.0%
!!! AACTTTTTTGAATTAGTTGT+TGG - chr8_3:55811033-55811052 Msa1296410:CDS 20.0%
!!! TTTATTTAGTTTTGTTGTGT+TGG - chr8_3:55811070-55811089 Msa1296410:CDS 20.0%
!!! TTTTAGACGTTTTTATGAAA+TGG - chr8_3:55811184-55811203 Msa1296410:CDS 20.0%
!!! TTTAGACGTTTTTATGAAAT+GGG - chr8_3:55811185-55811204 Msa1296410:CDS 20.0%
!!! GTTTTTTTTGTCTTTTTTTG+TGG - chr8_3:55811252-55811271 Msa1296410:intron 20.0%
!! TTACAACATACCATAATAAT+TGG + chr8_3:55811567-55811586 None:intergenic 20.0%
!! TTATATCATGATGATTACAT+TGG - chr8_3:55811597-55811616 Msa1296410:intron 20.0%
!!! GATTCTTTCATTTTTTTCTT+AGG - chr8_3:55811734-55811753 Msa1296410:intron 20.0%
!!! ATGTAGGAAATAATTTTTTG+AGG - chr8_3:55811787-55811806 Msa1296410:intron 20.0%
!! CTACTTGTGATAAAAATAAT+TGG - chr8_3:55811812-55811831 Msa1296410:intron 20.0%
!! AAAATAATTGGTATGTTGTT+TGG - chr8_3:55811824-55811843 Msa1296410:intron 20.0%
!!! TTTACTTATTTTCTTGTCTT+AGG + chr8_3:55812065-55812084 None:intergenic 20.0%
!! AATAAGTAAATAACCACTTA+TGG - chr8_3:55812075-55812094 Msa1296410:intron 20.0%
!!! TAGTTTTAGAGTTCTTTTAA+CGG - chr8_3:55812104-55812123 Msa1296410:intron 20.0%
!! AAAAATGAAGTTGAAATGTT+AGG - chr8_3:55812757-55812776 Msa1296410:CDS 20.0%
!! TATCAAGAAACAATTTGATT+GGG - chr8_3:55814043-55814062 Msa1296410:CDS 20.0%
!!! TTTTCCATAAGATTCTTTTA+AGG + chr8_3:55814396-55814415 None:intergenic 20.0%
!! TGAAACAAATATTTGAAGAT+AGG + chr8_3:55814607-55814626 None:intergenic 20.0%
!! TTCAAACTAATTTGAATAGA+AGG - chr8_3:55815122-55815141 Msa1296410:CDS 20.0%
!! AATAAAAATTGATACCTAGA+TGG + chr8_3:55815413-55815432 None:intergenic 20.0%
!! AATCAGAAGATAACAAAAAT+AGG + chr8_3:55815446-55815465 None:intergenic 20.0%
!! ATAATTCAATTTGACAACAT+TGG + chr8_3:55815725-55815744 None:intergenic 20.0%
!!! TTTCCTGTATTTTTTATTGA+AGG - chr8_3:55816400-55816419 Msa1296410:five_prime_UTR 20.0%
!!! TTCCTGTATTTTTTATTGAA+GGG - chr8_3:55816401-55816420 Msa1296410:five_prime_UTR 20.0%
! TAAAAAGTTGTAAAAAAGGG+TGG + chr8_3:55810607-55810626 None:intergenic 25.0%
! GGTGTAAAAAGTTGTAAAAA+AGG + chr8_3:55810611-55810630 None:intergenic 25.0%
! AAAAATAGAAGGAAAATAGC+AGG + chr8_3:55810927-55810946 None:intergenic 25.0%
!!! TTGATGATTTGTTTTTTCTG+AGG - chr8_3:55811323-55811342 Msa1296410:intron 25.0%
! TTACATTCTTCTTAGCATTA+TGG - chr8_3:55811373-55811392 Msa1296410:intron 25.0%
! TCTAATTAATTCAGCACAAA+GGG + chr8_3:55811760-55811779 None:intergenic 25.0%
! ATCTAATTAATTCAGCACAA+AGG + chr8_3:55811761-55811780 None:intergenic 25.0%
!! ATTAGAAAATAAGCTTGCTT+CGG - chr8_3:55811917-55811936 Msa1296410:intron 25.0%
!! CAATTTTTCTCTTGCAAAAA+TGG + chr8_3:55812443-55812462 None:intergenic 25.0%
!!! TTCATTTTTCATTTTTGCCA+GGG + chr8_3:55812746-55812765 None:intergenic 25.0%
!!! AAAGTATCGATTCTTCTATT+GGG + chr8_3:55812868-55812887 None:intergenic 25.0%
! CATAATGAAGAATCATCTAA+AGG - chr8_3:55813021-55813040 Msa1296410:CDS 25.0%
! ATTCCTGAATTATTTACTGA+GGG + chr8_3:55813822-55813841 None:intergenic 25.0%
! CTATCAAGAAACAATTTGAT+TGG - chr8_3:55814042-55814061 Msa1296410:CDS 25.0%
! CAATCCTTAAAAGAATCTTA+TGG - chr8_3:55814389-55814408 Msa1296410:CDS 25.0%
! TACTATGAGTCATAATAGAA+TGG + chr8_3:55814796-55814815 None:intergenic 25.0%
! AATATTCCAGAGTTTAACAT+AGG + chr8_3:55814831-55814850 None:intergenic 25.0%
! ATTGGAATTAAACATACCTA+CGG - chr8_3:55815051-55815070 Msa1296410:CDS 25.0%
! TCTATAATTTCCAACTTTCA+AGG - chr8_3:55815216-55815235 Msa1296410:intron 25.0%
! ATTCCTAATTGAAATAGTCT+TGG - chr8_3:55815258-55815277 Msa1296410:intron 25.0%
! TTTCACAGTGAAAACAAAAT+GGG + chr8_3:55815367-55815386 None:intergenic 25.0%
!! TTTTCACAGTGAAAACAAAA+TGG + chr8_3:55815368-55815387 None:intergenic 25.0%
!! CATTTAATTAGTTTCCATCT+AGG - chr8_3:55815396-55815415 Msa1296410:intron 25.0%
! TGTCAAATTGAATTATGAGT+TGG - chr8_3:55815729-55815748 Msa1296410:intron 25.0%
! TGCAATAACATTGTCAAAAA+GGG + chr8_3:55815911-55815930 None:intergenic 25.0%
!!! TTTGTTTTCATAACTTTCAG+GGG + chr8_3:55816000-55816019 None:intergenic 25.0%
!!! CTTTGTTTTCATAACTTTCA+GGG + chr8_3:55816001-55816020 None:intergenic 25.0%
!!! TCTTTGTTTTCATAACTTTC+AGG + chr8_3:55816002-55816021 None:intergenic 25.0%
TCTAAAGAGATATGAGATTG+AGG + chr8_3:55810896-55810915 None:intergenic 30.0%
TCAATCTCATATCTCTTTAG+AGG - chr8_3:55810895-55810914 Msa1296410:CDS 30.0%
!! ATTTTCTTTTGAAGGGAGAT+TGG + chr8_3:55811462-55811481 None:intergenic 30.0%
AATCTCCCTTCAAAAGAAAA+TGG - chr8_3:55811461-55811480 Msa1296410:intron 30.0%
TCTTGCTGATAAAGAAGAAT+TGG - chr8_3:55811878-55811897 Msa1296410:intron 30.0%
GTGTTAAAATCTTGCTTTGA+AGG - chr8_3:55812130-55812149 Msa1296410:intron 30.0%
!! AAAATCTTGCTTTGAAGGTT+TGG - chr8_3:55812135-55812154 Msa1296410:intron 30.0%
! AGAATTTGAAAAAGAGTGCA+TGG - chr8_3:55812342-55812361 Msa1296410:intron 30.0%
TGCAAGAGAAAAATTGATTG+AGG - chr8_3:55812447-55812466 Msa1296410:CDS 30.0%
!! AGAAGCATTATCTTTCTCAA+TGG + chr8_3:55812536-55812555 None:intergenic 30.0%
CAAATTCTCTCTCTTCATTT+CGG + chr8_3:55812600-55812619 None:intergenic 30.0%
!! CTTCATTTTTCATTTTTGCC+AGG + chr8_3:55812747-55812766 None:intergenic 30.0%
! CTTGTTCCTTCTTATTTCAA+GGG + chr8_3:55812791-55812810 None:intergenic 30.0%
! ACTTGTTCCTTCTTATTTCA+AGG + chr8_3:55812792-55812811 None:intergenic 30.0%
GTTAAACTCAACTAGTTCAA+TGG - chr8_3:55812810-55812829 Msa1296410:CDS 30.0%
!! CAAAGTATCGATTCTTCTAT+TGG + chr8_3:55812869-55812888 None:intergenic 30.0%
! CTCATTCATTTTCCTACTTA+GGG + chr8_3:55812941-55812960 None:intergenic 30.0%
! AAAGCATTACTCTTGAGAAT+TGG + chr8_3:55812966-55812985 None:intergenic 30.0%
!! TTCTGCATTGATTTCAGATT+CGG - chr8_3:55813149-55813168 Msa1296410:CDS 30.0%
TGAAATGGAAAAATTAGCAG+TGG - chr8_3:55813257-55813276 Msa1296410:CDS 30.0%
!! AAAGAAGTTGATGAGATCAA+TGG - chr8_3:55813321-55813340 Msa1296410:CDS 30.0%
! GTTATCCTTTAGTTCATCAA+GGG + chr8_3:55813424-55813443 None:intergenic 30.0%
! TGTTATCCTTTAGTTCATCA+AGG + chr8_3:55813425-55813444 None:intergenic 30.0%
ATATTCTCGAGTATATCATC+AGG + chr8_3:55813513-55813532 None:intergenic 30.0%
! AGAATATTAGAGTAGCTTTG+AGG - chr8_3:55813526-55813545 Msa1296410:CDS 30.0%
TGATCCTTCAAATAACTCTT+TGG - chr8_3:55813614-55813633 Msa1296410:CDS 30.0%
GTAATATTTACATCACTGGA+TGG + chr8_3:55813648-55813667 None:intergenic 30.0%
GTCAGTAATATTTACATCAC+TGG + chr8_3:55813652-55813671 None:intergenic 30.0%
! TGCTGTTTGTTTCTCTTTAT+TGG + chr8_3:55813681-55813700 None:intergenic 30.0%
CATTCCTGAATTATTTACTG+AGG + chr8_3:55813823-55813842 None:intergenic 30.0%
AAATAATTCAGGAATGCCAA+CGG - chr8_3:55813827-55813846 Msa1296410:CDS 30.0%
! ATGTTTTCCATTGGAAAACA+CGG + chr8_3:55813863-55813882 None:intergenic 30.0%
GTGTGTTATGATTTACTGAA+TGG - chr8_3:55813918-55813937 Msa1296410:CDS 30.0%
TTATGATTTACTGAATGGCA+AGG - chr8_3:55813923-55813942 Msa1296410:CDS 30.0%
! TTCAAATGGTCATGATTTTC+AGG - chr8_3:55814178-55814197 Msa1296410:CDS 30.0%
! TCAAATGGTCATGATTTTCA+GGG - chr8_3:55814179-55814198 Msa1296410:CDS 30.0%
TGAATCTCAAAAGGAAACAT+TGG - chr8_3:55814271-55814290 Msa1296410:CDS 30.0%
AGAATCTTATGGAAAACTTG+AGG - chr8_3:55814400-55814419 Msa1296410:CDS 30.0%
TGAAATCAGATCTTGATTCA+CGG - chr8_3:55814447-55814466 Msa1296410:CDS 30.0%
!! TGTCTTTCTGGTTAATATCA+TGG + chr8_3:55814723-55814742 None:intergenic 30.0%
TTCAATGCTTACTCCAAATT+GGG + chr8_3:55814945-55814964 None:intergenic 30.0%
!! TCTCTGAAACATACAATGTA+CGG - chr8_3:55814985-55815004 Msa1296410:intron 30.0%
TTGGAATTAAACATACCTAC+GGG - chr8_3:55815052-55815071 Msa1296410:CDS 30.0%
GAGATATGTTAATGCTTTGT+TGG - chr8_3:55815164-55815183 Msa1296410:intron 30.0%
! ATATGTTAATGCTTTGTTGG+TGG - chr8_3:55815167-55815186 Msa1296410:intron 30.0%
! TATGTTAATGCTTTGTTGGT+GGG - chr8_3:55815168-55815187 Msa1296410:intron 30.0%
! GTTTTTGTTACCTTGAAAGT+TGG + chr8_3:55815229-55815248 None:intergenic 30.0%
TCAAGGTAACAAAAACTTAC+AGG - chr8_3:55815233-55815252 Msa1296410:intron 30.0%
TATCTAACAGTTTCTTGTCT+CGG + chr8_3:55815493-55815512 None:intergenic 30.0%
AAACATCAAACCTGAATTAG+GGG + chr8_3:55815613-55815632 None:intergenic 30.0%
CAAACATCAAACCTGAATTA+GGG + chr8_3:55815614-55815633 None:intergenic 30.0%
! TTTCTAGTCAATCATACACA+TGG + chr8_3:55815684-55815703 None:intergenic 30.0%
!!! TATGAGTTGGTTTTTCATGT+TGG - chr8_3:55815742-55815761 Msa1296410:intron 30.0%
AAGAAACCATCCTTAATCTT+GGG - chr8_3:55815848-55815867 Msa1296410:intron 30.0%
CTGCAATAACATTGTCAAAA+AGG + chr8_3:55815912-55815931 None:intergenic 30.0%
TGAAGATGATACTAAATCCA+AGG - chr8_3:55816050-55816069 Msa1296410:intron 30.0%
AAAGATAAAATCTTCTCCAG+AGG + chr8_3:55816132-55816151 None:intergenic 30.0%
! CATTGTAACTTCTAAGAAAC+CGG - chr8_3:55816200-55816219 Msa1296410:five_prime_UTR 30.0%
GTTTGTGGAAGAAGTTATTA+TGG - chr8_3:55816256-55816275 Msa1296410:five_prime_UTR 30.0%
AATACGTACTTACTGAAGAA+AGG - chr8_3:55816365-55816384 Msa1296410:five_prime_UTR 30.0%
GTCCCTTCAATAAAAAATAC+AGG + chr8_3:55816406-55816425 None:intergenic 30.0%
AGGGAAAGAAGTGAAAAGAT+GGG + chr8_3:55810699-55810718 None:intergenic 35.0%
AAGGGAAAGAAGTGAAAAGA+TGG + chr8_3:55810700-55810719 None:intergenic 35.0%
! CCTCTCCATTTTCTTTTGAA+GGG + chr8_3:55811469-55811488 None:intergenic 35.0%
! ACCTCTCCATTTTCTTTTGA+AGG + chr8_3:55811470-55811489 None:intergenic 35.0%
TAAAATTGCACAAGAAGCAG+TGG - chr8_3:55811986-55812005 Msa1296410:intron 35.0%
!! AGCAAAAGTTGAAGTGTTGT+CGG - chr8_3:55812162-55812181 Msa1296410:intron 35.0%
! GATTTGTTCGAGAAGAACAA+GGG - chr8_3:55812284-55812303 Msa1296410:CDS 35.0%
! TTGAAAAAGAGTGCATGGTT+TGG - chr8_3:55812347-55812366 Msa1296410:intron 35.0%
! TGAAAAAGAGTGCATGGTTT+GGG - chr8_3:55812348-55812367 Msa1296410:intron 35.0%
AGTTATCCGTGACAAGTAAA+AGG - chr8_3:55812377-55812396 Msa1296410:intron 35.0%
! AAAACAATTGACTCAAGCTG+AGG - chr8_3:55812477-55812496 Msa1296410:CDS 35.0%
TAATGCTTCTCTGACATATG+AGG - chr8_3:55812546-55812565 Msa1296410:CDS 35.0%
CGAAATGAAGAGAGAGAATT+TGG - chr8_3:55812598-55812617 Msa1296410:CDS 35.0%
GAGATTCCCTTGAAATAAGA+AGG - chr8_3:55812782-55812801 Msa1296410:CDS 35.0%
!!! CGCTTTGTTTTCTTCTTCAA+CGG + chr8_3:55812908-55812927 None:intergenic 35.0%
CGTTAAAAGATTCCCTAAGT+AGG - chr8_3:55812926-55812945 Msa1296410:CDS 35.0%
! GCTCATTCATTTTCCTACTT+AGG + chr8_3:55812942-55812961 None:intergenic 35.0%
TAACCTTTGTGAGTTCTCTT+TGG - chr8_3:55813071-55813090 Msa1296410:CDS 35.0%
TTGGCATCAATGTCTGATAT+TGG - chr8_3:55813090-55813109 Msa1296410:CDS 35.0%
CTTCAGAAGTGGAAAACAAA+AGG - chr8_3:55813176-55813195 Msa1296410:CDS 35.0%
GTGGAAAACAAAAGGAATCA+TGG - chr8_3:55813184-55813203 Msa1296410:CDS 35.0%
AGCTTCAGACATAAATCTCA+TGG - chr8_3:55813224-55813243 Msa1296410:CDS 35.0%
CATGGATGACTTTGTTGAAA+TGG - chr8_3:55813242-55813261 Msa1296410:CDS 35.0%
ATCTTCCCTTGATGAACTAA+AGG - chr8_3:55813416-55813435 Msa1296410:CDS 35.0%
TAAAGGATAACATTCCCAGT+TGG - chr8_3:55813433-55813452 Msa1296410:CDS 35.0%
GGATGTAGTAAAAATGATCC+TGG - chr8_3:55813461-55813480 Msa1296410:CDS 35.0%
AATATGACCAGAGACTTTGT+CGG + chr8_3:55813586-55813605 None:intergenic 35.0%
AAAGTCTCTGGTCATATTGA+AGG - chr8_3:55813588-55813607 Msa1296410:CDS 35.0%
TCCTTCAAATAACTCTTTGG+TGG - chr8_3:55813617-55813636 Msa1296410:CDS 35.0%
ACCACCAAAGAGTTATTTGA+AGG + chr8_3:55813621-55813640 None:intergenic 35.0%
TGTTTCTCTTTATTGGTGAG+AGG + chr8_3:55813674-55813693 None:intergenic 35.0%
GTACCCTCAGTAAATAATTC+AGG - chr8_3:55813816-55813835 Msa1296410:CDS 35.0%
AATAATTCAGGAATGCCAAC+GGG - chr8_3:55813828-55813847 Msa1296410:CDS 35.0%
! TGAGTTCAGATGTTTTCCAT+TGG + chr8_3:55813872-55813891 None:intergenic 35.0%
TGAAGAACTAACAACAGCTT+TGG - chr8_3:55813965-55813984 Msa1296410:CDS 35.0%
!! AACTAACAACAGCTTTGGAT+TGG - chr8_3:55813970-55813989 Msa1296410:CDS 35.0%
!! GAATCACTGTTTTTCACTTC+AGG - chr8_3:55813998-55814017 Msa1296410:CDS 35.0%
TCAGGATGTTTCTTGTATGA+AGG - chr8_3:55814016-55814035 Msa1296410:CDS 35.0%
AAAACATGGAAACTGTTCTG+CGG + chr8_3:55814144-55814163 None:intergenic 35.0%
GTAGTTACTTGAGGAAAACA+TGG + chr8_3:55814158-55814177 None:intergenic 35.0%
! CCATTTGAAGTAGTTACTTG+AGG + chr8_3:55814167-55814186 None:intergenic 35.0%
CCTCAAGTAACTACTTCAAA+TGG - chr8_3:55814164-55814183 Msa1296410:CDS 35.0%
TCAAGAGATGTATTCTGATG+AGG - chr8_3:55814208-55814227 Msa1296410:CDS 35.0%
GATCAATGCTGAATCTCAAA+AGG - chr8_3:55814262-55814281 Msa1296410:CDS 35.0%
TCTCAAAAGGAAACATTGGA+AGG - chr8_3:55814275-55814294 Msa1296410:CDS 35.0%
CTCAAAAGGAAACATTGGAA+GGG - chr8_3:55814276-55814295 Msa1296410:CDS 35.0%
TGATAGGATTGAGTCCTTAA+CGG - chr8_3:55814316-55814335 Msa1296410:CDS 35.0%
! TTCCAAAAGTTGATCCGTTA+AGG + chr8_3:55814333-55814352 None:intergenic 35.0%
ATCTTGATTCACGGCATAAA+GGG - chr8_3:55814456-55814475 Msa1296410:CDS 35.0%
!!! CAAGGTTTTGGAATTAGAAG+TGG - chr8_3:55814502-55814521 Msa1296410:CDS 35.0%
TCTCTAATTCTTCACAACTG+TGG + chr8_3:55814544-55814563 None:intergenic 35.0%
GATAAACTTACAGTTCGCAA+TGG + chr8_3:55814748-55814767 None:intergenic 35.0%
TAGAATGGTCATCGAGAAAA+AGG + chr8_3:55814781-55814800 None:intergenic 35.0%
CTAGTTCCTATGTTAAACTC+TGG - chr8_3:55814822-55814841 Msa1296410:CDS 35.0%
ACAAATTAGGGATCCCAATT+TGG - chr8_3:55814929-55814948 Msa1296410:intron 35.0%
GTTCAATGCTTACTCCAAAT+TGG + chr8_3:55814946-55814965 None:intergenic 35.0%
AATTCCAATCATCTACCAGA+AGG + chr8_3:55815040-55815059 None:intergenic 35.0%
ATCTAACAGTTTCTTGTCTC+GGG + chr8_3:55815492-55815511 None:intergenic 35.0%
GACTGATATGGTTTAGAAAG+TGG - chr8_3:55815566-55815585 Msa1296410:CDS 35.0%
CCAAACATCAAACCTGAATT+AGG + chr8_3:55815615-55815634 None:intergenic 35.0%
! CCTAATTCAGGTTTGATGTT+TGG - chr8_3:55815612-55815631 Msa1296410:CDS 35.0%
AGATTGGCAATTGACAAGTT+AGG - chr8_3:55815635-55815654 Msa1296410:exon 35.0%
GATTGGCAATTGACAAGTTA+GGG - chr8_3:55815636-55815655 Msa1296410:exon 35.0%
TCATACACATGGAGATAAGT+AGG + chr8_3:55815673-55815692 None:intergenic 35.0%
TGCTAAATCCTAAATCCTAC+AGG - chr8_3:55815783-55815802 Msa1296410:intron 35.0%
CAAGAAACCATCCTTAATCT+TGG - chr8_3:55815847-55815866 Msa1296410:intron 35.0%
!! ATTCGTTTTTGTTGTCGTGA+TGG + chr8_3:55815965-55815984 None:intergenic 35.0%
! CAGTGTTACTGCTAATGATT+TGG - chr8_3:55816176-55816195 Msa1296410:five_prime_UTR 35.0%
CGGTTTCTTAGAAGTTACAA+TGG + chr8_3:55816202-55816221 None:intergenic 35.0%
CATTGTACCTACTAAGAAAC+CGG - chr8_3:55816224-55816243 Msa1296410:five_prime_UTR 35.0%
ATTGTACCTACTAAGAAACC+GGG - chr8_3:55816225-55816244 Msa1296410:five_prime_UTR 35.0%
! CTTTCAAGTGTTCAATGGAA+GGG + chr8_3:55816313-55816332 None:intergenic 35.0%
! ACTTTCAAGTGTTCAATGGA+AGG + chr8_3:55816314-55816333 None:intergenic 35.0%
! TTTTATTGAAGGGACTTGTC+TGG - chr8_3:55816411-55816430 Msa1296410:five_prime_UTR 35.0%
!!! TGTCGGCTTGGTTGTTTTAT+TGG + chr8_3:55810574-55810593 None:intergenic 40.0%
TGGGAGTCAAGAGAAAATGA+CGG + chr8_3:55810665-55810684 None:intergenic 40.0%
AAGATGGGAAAGTGAAGAGT+GGG + chr8_3:55810684-55810703 None:intergenic 40.0%
AAAGATGGGAAAGTGAAGAG+TGG + chr8_3:55810685-55810704 None:intergenic 40.0%
TTGGTGAGAGAAAGGGAAAA+GGG + chr8_3:55810718-55810737 None:intergenic 40.0%
TTTGGTGAGAGAAAGGGAAA+AGG + chr8_3:55810719-55810738 None:intergenic 40.0%
! TGTGTGTTTGGTGAGAGAAA+GGG + chr8_3:55810725-55810744 None:intergenic 40.0%
CCTGGTTCACACTAAAATGA+TGG + chr8_3:55811118-55811137 None:intergenic 40.0%
!! CCATCATTTTAGTGTGAACC+AGG - chr8_3:55811115-55811134 Msa1296410:CDS 40.0%
! GTATCCTCTGTAGTTCTACT+CGG - chr8_3:55811137-55811156 Msa1296410:CDS 40.0%
GCATTATGGATCAAAAACCG+TGG - chr8_3:55811387-55811406 Msa1296410:intron 40.0%
!! TCTGATGACTTTTTCCTCCA+AGG + chr8_3:55811413-55811432 None:intergenic 40.0%
CCCTTCAAAAGAAAATGGAG+AGG - chr8_3:55811466-55811485 Msa1296410:intron 40.0%
!! GGTTTGATTTTCCGCGTTTT+AGG - chr8_3:55811845-55811864 Msa1296410:intron 40.0%
! GTGTAATTCTAAAGACGAGC+TGG - chr8_3:55811950-55811969 Msa1296410:intron 40.0%
AAAACTACTGCAGCCATAAG+TGG + chr8_3:55812091-55812110 None:intergenic 40.0%
TGAAGAAAGAGTAGCCCATT+TGG - chr8_3:55812228-55812247 Msa1296410:intron 40.0%
! CGATTTGTTCGAGAAGAACA+AGG - chr8_3:55812283-55812302 Msa1296410:CDS 40.0%
GATTCATGATGCTGTGATGA+AGG - chr8_3:55812312-55812331 Msa1296410:CDS 40.0%
AAGAGAGAGAATTTGGTCGT+CGG - chr8_3:55812605-55812624 Msa1296410:CDS 40.0%
CTGACACTCTGATTCTAACT+TGG + chr8_3:55812680-55812699 None:intergenic 40.0%
! ATCTAAAGGTCAAGTTGCTG+TGG - chr8_3:55813035-55813054 Msa1296410:CDS 40.0%
ATGCCAAAGAGAACTCACAA+AGG + chr8_3:55813077-55813096 None:intergenic 40.0%
TGATATTGGCAGTGATGACA+AGG - chr8_3:55813104-55813123 Msa1296410:CDS 40.0%
GAGAAAGACACTGAAATCTC+TGG - chr8_3:55813288-55813307 Msa1296410:CDS 40.0%
TCAATGGCTTCTCAGAAACT+AGG - chr8_3:55813337-55813356 Msa1296410:CDS 40.0%
AGAAGTCCGAAATGTGATCA+GGG + chr8_3:55813377-55813396 None:intergenic 40.0%
! CAGGATTTTTGTGAGTGACA+TGG + chr8_3:55813494-55813513 None:intergenic 40.0%
GAAGACCTGAGTAAGTCAAT+AGG - chr8_3:55813708-55813727 Msa1296410:CDS 40.0%
!! CCTTTCCTATTGACTTACTC+AGG + chr8_3:55813716-55813735 None:intergenic 40.0%
CCTGAGTAAGTCAATAGGAA+AGG - chr8_3:55813713-55813732 Msa1296410:CDS 40.0%
GAATTATCACAATCCACAGC+AGG + chr8_3:55813768-55813787 None:intergenic 40.0%
!! GGATGATAGGTCATTTTGCA+GGG - chr8_3:55814099-55814118 Msa1296410:CDS 40.0%
!! GATGATAGGTCATTTTGCAG+GGG - chr8_3:55814100-55814119 Msa1296410:CDS 40.0%
AAACATGGAAACTGTTCTGC+GGG + chr8_3:55814143-55814162 None:intergenic 40.0%
AGCTTCAATCAGCTACTGAT+AGG - chr8_3:55814300-55814319 Msa1296410:CDS 40.0%
!! GTCCTTAACGGATCAACTTT+TGG - chr8_3:55814328-55814347 Msa1296410:CDS 40.0%
GATCTTGATTCACGGCATAA+AGG - chr8_3:55814455-55814474 Msa1296410:CDS 40.0%
TCTTGATTCACGGCATAAAG+GGG - chr8_3:55814457-55814476 Msa1296410:CDS 40.0%
TAAAGGGGCGGAATTAAAAG+AGG - chr8_3:55814472-55814491 Msa1296410:CDS 40.0%
ATTAAAAGAGGTCGGTCTCA+AGG - chr8_3:55814484-55814503 Msa1296410:CDS 40.0%
GAGTTGCAATTCAACACATC+TGG + chr8_3:55814567-55814586 None:intergenic 40.0%
AATTGCAACTCCAGCTTGAA+AGG - chr8_3:55814576-55814595 Msa1296410:CDS 40.0%
ATAGGTCTTACCTTTCAAGC+TGG + chr8_3:55814589-55814608 None:intergenic 40.0%
GGCATGCTGAGAACATTAAT+TGG + chr8_3:55814685-55814704 None:intergenic 40.0%
TAATGTTCTCAGCATGCCAA+AGG - chr8_3:55814687-55814706 Msa1296410:CDS 40.0%
TACCAGAAGGAACCAAATCA+TGG + chr8_3:55815027-55815046 None:intergenic 40.0%
CACATGATATCGAAGAACCA+AGG + chr8_3:55815084-55815103 None:intergenic 40.0%
GCGCCAAGACTATTTCAATT+AGG + chr8_3:55815264-55815283 None:intergenic 40.0%
CAGTGAGAGTCATATTACAG+TGG + chr8_3:55815297-55815316 None:intergenic 40.0%
!! TTAATTCTGAAGCTGCCTCT+AGG + chr8_3:55815338-55815357 None:intergenic 40.0%
TCTTGTCTCGGGAATATTAG+AGG + chr8_3:55815481-55815500 None:intergenic 40.0%
CAGGTTTGATGTTTGGAGAT+TGG - chr8_3:55815619-55815638 Msa1296410:CDS 40.0%
ATCCTAAATCCTACAGGACT+TGG - chr8_3:55815789-55815808 Msa1296410:intron 40.0%
! GTCACTTACTTTGGAAACCT+TGG + chr8_3:55816070-55816089 None:intergenic 40.0%
TTGTATAATGCCTGGAATGG+TGG + chr8_3:55816109-55816128 None:intergenic 40.0%
AGGTTGTATAATGCCTGGAA+TGG + chr8_3:55816112-55816131 None:intergenic 40.0%
TTAGCAGTAACACTGTCATC+TGG + chr8_3:55816171-55816190 None:intergenic 40.0%
TTCTTAGTAGGTACAATGGC+CGG + chr8_3:55816222-55816241 None:intergenic 40.0%
CGGTTTCTTAGTAGGTACAA+TGG + chr8_3:55816226-55816245 None:intergenic 40.0%
! TGGAAGGGATGTTTTCATGT+TGG + chr8_3:55816298-55816317 None:intergenic 40.0%
! TGCGACTTTCAAGTGTTCAA+TGG + chr8_3:55816318-55816337 None:intergenic 40.0%
AGGGTGGTGATAGTAAGTGT+CGG + chr8_3:55810591-55810610 None:intergenic 45.0%
! TTGTTGGTGAGAACAGAGAG+AGG + chr8_3:55810632-55810651 None:intergenic 45.0%
! GTGTGTGTTTGGTGAGAGAA+AGG + chr8_3:55810726-55810745 None:intergenic 45.0%
! CAACAGAGAGAGTGTGTGTT+TGG + chr8_3:55810737-55810756 None:intergenic 45.0%
GTAGAACTACAGAGGATACC+TGG + chr8_3:55811136-55811155 None:intergenic 45.0%
AAGCACGTGTACCTAAAACG+CGG + chr8_3:55811859-55811878 None:intergenic 45.0%
AAGGTCTGGATGAAGCTTTG+CGG - chr8_3:55812191-55812210 Msa1296410:intron 45.0%
GAAAGAGTAGCCCATTTGGA+TGG - chr8_3:55812232-55812251 Msa1296410:intron 45.0%
CTTCAGAGCTCCATCCAAAT+GGG + chr8_3:55812245-55812264 None:intergenic 45.0%
TTCGAGAAGAACAAGGGCAA+AGG - chr8_3:55812290-55812309 Msa1296410:CDS 45.0%
! AAAAGAGTGCATGGTTTGGG+AGG - chr8_3:55812351-55812370 Msa1296410:intron 45.0%
ATCCGTGACAAGTAAAAGGC+TGG - chr8_3:55812381-55812400 Msa1296410:intron 45.0%
! TGCCAGCCTTTTACTTGTCA+CGG + chr8_3:55812386-55812405 None:intergenic 45.0%
!! CCAACTCCTTTTCAAGCACT+CGG + chr8_3:55812573-55812592 None:intergenic 45.0%
!! TTCATTTTTGCCAGGGAACC+AGG + chr8_3:55812739-55812758 None:intergenic 45.0%
TCTTCACTTGACAGTTCTCC+TGG - chr8_3:55812838-55812857 Msa1296410:CDS 45.0%
CTTCACTTGACAGTTCTCCT+GGG - chr8_3:55812839-55812858 Msa1296410:CDS 45.0%
ATTCTTCTATTGGGAGTCCC+AGG + chr8_3:55812859-55812878 None:intergenic 45.0%
TGAAATCAATGCAGAAGCCG+AGG + chr8_3:55813145-55813164 None:intergenic 45.0%
GACTACCCCTGATCACATTT+CGG - chr8_3:55813368-55813387 Msa1296410:CDS 45.0%
GAAGTCCGAAATGTGATCAG+GGG + chr8_3:55813376-55813395 None:intergenic 45.0%
GAGAAGTCCGAAATGTGATC+AGG + chr8_3:55813378-55813397 None:intergenic 45.0%
! TAACATTCCCAGTTGGCTTC+AGG - chr8_3:55813440-55813459 Msa1296410:CDS 45.0%
ACTACATCCTGAAGCCAACT+GGG + chr8_3:55813450-55813469 None:intergenic 45.0%
TACTACATCCTGAAGCCAAC+TGG + chr8_3:55813451-55813470 None:intergenic 45.0%
!!! GAGTGACATGGTTTTGTTCC+AGG + chr8_3:55813482-55813501 None:intergenic 45.0%
AATCTAGATCCGTGCGTCTT+TGG - chr8_3:55813558-55813577 Msa1296410:CDS 45.0%
! TTTGGTTCCGACAAAGTCTC+TGG - chr8_3:55813576-55813595 Msa1296410:CDS 45.0%
AAGAATCAACTTGCCTGCTG+TGG - chr8_3:55813752-55813771 Msa1296410:CDS 45.0%
GTCTCATCACTTGTGCACAA+GGG + chr8_3:55813795-55813814 None:intergenic 45.0%
AGTCTCATCACTTGTGCACA+AGG + chr8_3:55813796-55813815 None:intergenic 45.0%
! ACATGGTCCGTGTTTTCCAA+TGG - chr8_3:55813853-55813872 Msa1296410:CDS 45.0%
AGCGAAAGTGAAGCAGAGTT+TGG - chr8_3:55814077-55814096 Msa1296410:CDS 45.0%
GCGAAAGTGAAGCAGAGTTT+GGG - chr8_3:55814078-55814097 Msa1296410:CDS 45.0%
! GAAGCAGAGTTTGGGATGAT+AGG - chr8_3:55814086-55814105 Msa1296410:CDS 45.0%
!! GGGATGATAGGTCATTTTGC+AGG - chr8_3:55814098-55814117 Msa1296410:CDS 45.0%
! TTCGCAATGGCTTGTCTTTC+TGG + chr8_3:55814735-55814754 None:intergenic 45.0%
GATATTGCCGCACCATGATT+TGG - chr8_3:55815012-55815031 Msa1296410:intron 45.0%
GAAGGAACCAAATCATGGTG+CGG + chr8_3:55815022-55815041 None:intergenic 45.0%
!! CACCATGATTTGGTTCCTTC+TGG - chr8_3:55815022-55815041 Msa1296410:intron 45.0%
GGTTCCTTCTGGTAGATGAT+TGG - chr8_3:55815033-55815052 Msa1296410:CDS 45.0%
! GAAATAGTCTTGGCGCAAGT+TGG - chr8_3:55815268-55815287 Msa1296410:intron 45.0%
GTCTACATAGAAGCTCCTAG+AGG - chr8_3:55815320-55815339 Msa1296410:intron 45.0%
GAAATCGAAGCCCCTAATTC+AGG - chr8_3:55815600-55815619 Msa1296410:CDS 45.0%
CTCCAAGTCCTGTAGGATTT+AGG + chr8_3:55815794-55815813 None:intergenic 45.0%
CTGTTATCTCCAAGTCCTGT+AGG + chr8_3:55815801-55815820 None:intergenic 45.0%
AACAGCCGCTTCAGAAAAGT+TGG - chr8_3:55815816-55815835 Msa1296410:intron 45.0%
!! CTCTGCCAACTTTTCTGAAG+CGG + chr8_3:55815824-55815843 None:intergenic 45.0%
CTGCTTCCCAAGATTAAGGA+TGG + chr8_3:55815857-55815876 None:intergenic 45.0%
TCAGCTGCTTCCCAAGATTA+AGG + chr8_3:55815861-55815880 None:intergenic 45.0%
TTAATCTTGGGAAGCAGCTG+AGG - chr8_3:55815860-55815879 Msa1296410:intron 45.0%
TCAAAAAGGGCTGCATCCTT+TGG + chr8_3:55815898-55815917 None:intergenic 45.0%
!!! TTTTGTTGTCGTGATGGTGG+TGG + chr8_3:55815959-55815978 None:intergenic 45.0%
!! CGTTTTTGTTGTCGTGATGG+TGG + chr8_3:55815962-55815981 None:intergenic 45.0%
TCATAACTTTCAGGGGAGCA+GGG + chr8_3:55815993-55816012 None:intergenic 45.0%
TTCATAACTTTCAGGGGAGC+AGG + chr8_3:55815994-55816013 None:intergenic 45.0%
TCCAGGCATTATACAACCTC+TGG - chr8_3:55816113-55816132 Msa1296410:intron 45.0%
TCCAGAGGTTGTATAATGCC+TGG + chr8_3:55816117-55816136 None:intergenic 45.0%
!! GGTGATAGTAAGTGTCGGCT+TGG + chr8_3:55810586-55810605 None:intergenic 50.0%
TGACGGAGTGAGTGTGTTGT+TGG + chr8_3:55810648-55810667 None:intergenic 50.0%
TGGATCAAAAACCGTGGCCT+TGG - chr8_3:55811393-55811412 Msa1296410:intron 50.0%
! ATCAAAAACCGTGGCCTTGG+AGG - chr8_3:55811396-55811415 Msa1296410:intron 50.0%
!! GACTTTTTCCTCCAAGGCCA+CGG + chr8_3:55811407-55811426 None:intergenic 50.0%
ATTGCACAAGAAGCAGTGGC+AGG - chr8_3:55811990-55812009 Msa1296410:intron 50.0%
!! GAAGTGTTGTCGGTGAAGCA+AGG - chr8_3:55812172-55812191 Msa1296410:intron 50.0%
AGGTCTGGATGAAGCTTTGC+GGG - chr8_3:55812192-55812211 Msa1296410:intron 50.0%
TGAAGCTTTGCGGGACAGAT+TGG - chr8_3:55812201-55812220 Msa1296410:intron 50.0%
CCTTCAGAGCTCCATCCAAA+TGG + chr8_3:55812246-55812265 None:intergenic 50.0%
! CCATTTGGATGGAGCTCTGA+AGG - chr8_3:55812243-55812262 Msa1296410:intron 50.0%
TGAGGTCCGAGTGCTTGAAA+AGG - chr8_3:55812564-55812583 Msa1296410:CDS 50.0%
CCGAGTGCTTGAAAAGGAGT+TGG - chr8_3:55812570-55812589 Msa1296410:CDS 50.0%
! AGAGATTGCGCCTTCTGGTT+CGG - chr8_3:55812698-55812717 Msa1296410:CDS 50.0%
GTAACCGTTTCCGAACCAGA+AGG + chr8_3:55812711-55812730 None:intergenic 50.0%
! GATTCGGAGCACTTCAGAAG+TGG - chr8_3:55813165-55813184 Msa1296410:CDS 50.0%
! TCATGGTCCTGCAGAAGCAT+TGG - chr8_3:55813201-55813220 Msa1296410:CDS 50.0%
TGAAGCTCCAATGCTTCTGC+AGG + chr8_3:55813211-55813230 None:intergenic 50.0%
TTGTCGGAACCAAAGACGCA+CGG + chr8_3:55813570-55813589 None:intergenic 50.0%
TGATTCACGGCATAAAGGGG+CGG - chr8_3:55814460-55814479 Msa1296410:CDS 50.0%
GGGGCGGAATTAAAAGAGGT+CGG - chr8_3:55814476-55814495 Msa1296410:CDS 50.0%
! AGAGGTCGGTCTCAAGGTTT+TGG - chr8_3:55814490-55814509 Msa1296410:CDS 50.0%
TGTTCTCAGCATGCCAAAGG+AGG - chr8_3:55814690-55814709 Msa1296410:CDS 50.0%
GTTCTCAGCATGCCAAAGGA+GGG - chr8_3:55814691-55814710 Msa1296410:CDS 50.0%
AAAAGGGCTGCATCCTTTGG+TGG + chr8_3:55815895-55815914 None:intergenic 50.0%
GGAGTCACGGTCACTTACTT+TGG + chr8_3:55816079-55816098 None:intergenic 50.0%
CCTACTAAGAAACCGGGAAG+CGG - chr8_3:55816231-55816250 Msa1296410:five_prime_UTR 50.0%
TTCCACAAACTTCCGCTTCC+CGG + chr8_3:55816246-55816265 None:intergenic 50.0%
AGACGTGTCCTCTTAGTGTC+TGG - chr8_3:55816456-55816475 Msa1296410:five_prime_UTR 50.0%
CGAGCCGAGTAGAACTACAG+AGG + chr8_3:55811144-55811163 None:intergenic 55.0%
GTTGTCGGTGAAGCAAGGTC+TGG - chr8_3:55812177-55812196 Msa1296410:intron 55.0%
GTGTCAGAGATTGCGCCTTC+TGG - chr8_3:55812693-55812712 Msa1296410:CDS 55.0%
!! TGCGCCTTCTGGTTCGGAAA+CGG - chr8_3:55812704-55812723 Msa1296410:CDS 55.0%
!! CTGGTTCGGAAACGGTTACC+AGG - chr8_3:55812712-55812731 Msa1296410:CDS 55.0%
!! GGTTAGCTGTGCTGACTCCT+CGG - chr8_3:55813125-55813144 Msa1296410:CDS 55.0%
!! AGGAATGCCAACGGGCTACA+TGG - chr8_3:55813836-55813855 Msa1296410:CDS 55.0%
TCATGGTTCGAGCCCTCCTT+TGG + chr8_3:55814706-55814725 None:intergenic 55.0%
! ATACCTACGGGCTACTGCCT+TGG - chr8_3:55815064-55815083 Msa1296410:CDS 55.0%
TGGGAAGCAGCTGAGGTCAT+TGG - chr8_3:55815867-55815886 Msa1296410:intron 55.0%
!! GAGGTCATTGGCTCCACCAA+AGG - chr8_3:55815879-55815898 Msa1296410:intron 55.0%
!! TGTTGTCGTGATGGTGGTGG+CGG + chr8_3:55815956-55815975 None:intergenic 55.0%
ACTTTCAGGGGAGCAGGGAT+AGG + chr8_3:55815988-55816007 None:intergenic 55.0%
! TGGTGGTGAGATCGGAGTCA+CGG + chr8_3:55816092-55816111 None:intergenic 55.0%
TCCGATCTCACCACCATTCC+AGG - chr8_3:55816096-55816115 Msa1296410:intron 55.0%
! GCCTGGAATGGTGGTGAGAT+CGG + chr8_3:55816100-55816119 None:intergenic 55.0%
CCGCTTCCCGGTTTCTTAGT+AGG + chr8_3:55816234-55816253 None:intergenic 55.0%
AACCGGGAAGCGGAAGTTTG+TGG - chr8_3:55816241-55816260 Msa1296410:five_prime_UTR 55.0%
CGGAAACGGTTACCAGGTCC+TGG - chr8_3:55812718-55812737 Msa1296410:CDS 60.0%
GTTACCAGGTCCTGGTTCCC+TGG - chr8_3:55812726-55812745 Msa1296410:CDS 60.0%
TTTGCCAGGGAACCAGGACC+TGG + chr8_3:55812733-55812752 None:intergenic 60.0%
ACACGGACCATGTAGCCCGT+TGG + chr8_3:55813846-55813865 None:intergenic 60.0%
GAACCAAGGCAGTAGCCCGT+AGG + chr8_3:55815070-55815089 None:intergenic 60.0%
!! GTGGCGGATGTGGTACTGGT+AGG + chr8_3:55815940-55815959 None:intergenic 60.0%
!! GGTGGTGGCGGATGTGGTAC+TGG + chr8_3:55815944-55815963 None:intergenic 65.0%
!! CGTGATGGTGGTGGCGGATG+TGG + chr8_3:55815950-55815969 None:intergenic 65.0%
Chromosome Type Strat End Strand Name
chr8_3 gene 55810557 55816479 55810557 ID=Msa1296410;Name=Msa1296410
chr8_3 mRNA 55810557 55816479 55810557 ID=Msa1296410-mRNA-1;Parent=Msa1296410;Name=Msa1296410-mRNA-1;_AED=0.03;_eAED=0.03;_QI=379|1|1|1|0.8|0.66|6|150|1089
chr8_3 exon 55810557 55811231 55810557 ID=Msa1296410-mRNA-1:exon:15997;Parent=Msa1296410-mRNA-1
chr8_3 exon 55812280 55812337 55812280 ID=Msa1296410-mRNA-1:exon:15996;Parent=Msa1296410-mRNA-1
chr8_3 exon 55812439 55814884 55812439 ID=Msa1296410-mRNA-1:exon:15995;Parent=Msa1296410-mRNA-1
chr8_3 exon 55815025 55815169 55815025 ID=Msa1296410-mRNA-1:exon:15994;Parent=Msa1296410-mRNA-1
chr8_3 exon 55815549 55815663 55815549 ID=Msa1296410-mRNA-1:exon:15993;Parent=Msa1296410-mRNA-1
chr8_3 exon 55816120 55816479 55816120 ID=Msa1296410-mRNA-1:exon:15992;Parent=Msa1296410-mRNA-1
chr8_3 five_prime_UTR 55816120 55816479 55816120 ID=Msa1296410-mRNA-1:five_prime_utr;Parent=Msa1296410-mRNA-1
chr8_3 five_prime_UTR 55815645 55815663 55815645 ID=Msa1296410-mRNA-1:five_prime_utr;Parent=Msa1296410-mRNA-1
chr8_3 CDS 55815549 55815644 55815549 ID=Msa1296410-mRNA-1:cds;Parent=Msa1296410-mRNA-1
chr8_3 CDS 55815025 55815169 55815025 ID=Msa1296410-mRNA-1:cds;Parent=Msa1296410-mRNA-1
chr8_3 CDS 55812439 55814884 55812439 ID=Msa1296410-mRNA-1:cds;Parent=Msa1296410-mRNA-1
chr8_3 CDS 55812280 55812337 55812280 ID=Msa1296410-mRNA-1:cds;Parent=Msa1296410-mRNA-1
chr8_3 CDS 55810707 55811231 55810707 ID=Msa1296410-mRNA-1:cds;Parent=Msa1296410-mRNA-1
chr8_3 three_prime_UTR 55810557 55810706 55810557 ID=Msa1296410-mRNA-1:three_prime_utr;Parent=Msa1296410-mRNA-1
Gene Sequence

>Msa1296410

ATGGATCAAAAACCGTGGCCTTGGAGGAAAAAGTCATCAGAAAAGACAATAGTAACTGCTGAAAACGCCAATCTCCCTTCAAAAGAAAATGGAGAGGTACACGTGCTTCTTGCTGATAAAGAAGAATTGGAGAAAGACTTCAAAGAATTAGAAAATAAGCTTGCTTCGGCACTTTCTGAGTGTAATTCTAAAGACGAGCTGGTAAAGAAACAAACTAAAATTGCACAAGAAGCAGTGGCAGGTTTGGAAAAAGCAAAAGTTGAAGTGTTGTCGGTGAAGCAAGGTCTGGATGAAGCTTTGCGGGACAGATTGGTTTATGAAGAAAGAGTAGCCCATTTGGATGGAGCTCTGAAGGAATGTATGCAGCAGTTACGATTTGTTCGAGAAGAACAAGGGCAAAGGATTCATGATGCTGTGATGAAGGCTTCAAAAGAATTTGAAAAAGAGTGCATGGTTTGGGAGGATCAGTTATCCGTGACAAGTAAAAGGCTGGCAAAAGTTGAGACTGAAAATTCTCATCTTAATACATCCATTTTTGCAAGAGAAAAATTGATTGAGGATCTGAAAAAACAATTGACTCAAGCTGAGGCAGATCATAGTGCATTGATGATTAGATTAGAGTCCATTGAGAAAGATAATGCTTCTCTGACATATGAGGTCCGAGTGCTTGAAAAGGAGTTGGAGATCCGAAATGAAGAGAGAGAATTTGGTCGTCGGACAGCTGATGTTTCTCACAAACATCACTTAGAGAATGTTAAGAAAATTGCCAAGTTAGAATCAGAGTGTCAGAGATTGCGCCTTCTGGTTCGGAAACGGTTACCAGGTCCTGGTTCCCTGGCAAAAATGAAAAATGAAGTTGAAATGTTAGGACGAGATTCCCTTGAAATAAGAAGGAACAAGTTAAACTCAACTAGTTCAATGGTTGAATCTTCACTTGACAGTTCTCCTGGGACTCCCAATAGAAGAATCGATACTTTGACAGAGCAGCTGTGTGCCGTTGAAGAAGAAAACAAAGCGTTAAAAGATTCCCTAAGTAGGAAAATGAATGAGCTCCAATTCTCAAGAGTAATGCTTTCTCGCACAGCTTCAAAACTTTTGCAACTCGAGTCGCATAATGAAGAATCATCTAAAGGTCAAGTTGCTGTGGAGCAGCTTAGAAGTAACCTTTGTGAGTTCTCTTTGGCATCAATGTCTGATATTGGCAGTGATGACAAGGTTAGCTGTGCTGACTCCTCGGCTTCTGCATTGATTTCAGATTCGGAGCACTTCAGAAGTGGAAAACAAAAGGAATCATGGTCCTGCAGAAGCATTGGAGCTTCAGACATAAATCTCATGGATGACTTTGTTGAAATGGAAAAATTAGCAGTGGTCTCTGTTGAGAAAGACACTGAAATCTCTGGTGCTTCTTTGAAAGAAGTTGATGAGATCAATGGCTTCTCAGAAACTAGGAAAAATGAGACTACCCCTGATCACATTTCGGACTTCTCAACATCAAATAAAAAAGTATCTTCCCTTGATGAACTAAAGGATAACATTCCCAGTTGGCTTCAGGATGTAGTAAAAATGATCCTGGAACAAAACCATGTCACTCACAAAAATCCTGATGATATACTCGAGAATATTAGAGTAGCTTTGAGGAATCTGAATAATCTAGATCCGTGCGTCTTTGGTTCCGACAAAGTCTCTGGTCATATTGAAGGATATGATCCTTCAAATAACTCTTTGGTGGTAGTTCCATCCAGTGATGTAAATATTACTGACCTCTCACCAATAAAGAGAAACAAACAGCAAGCTCATGAAGACCTGAGTAAGTCAATAGGAAAGGTAATTGAGCTTATTGAAAGAATCAACTTGCCTGCTGTGGATTGTGATAATTCAGATCCCTTGTGCACAAGTGATGAGACTGTACCCTCAGTAAATAATTCAGGAATGCCAACGGGCTACATGGTCCGTGTTTTCCAATGGAAAACATCTGAACTCAGCAACGTTTTGCAGCAATTTCTACATGTGTGTTATGATTTACTGAATGGCAAGGTTGATCATGAAAAATTTGCTGAAGAACTAACAACAGCTTTGGATTGGATAATGAATCACTGTTTTTCACTTCAGGATGTTTCTTGTATGAAGGATGCTATCAAGAAACAATTTGATTGGGATGAGACACGAAGCGAAAGTGAAGCAGAGTTTGGGATGATAGGTCATTTTGCAGGGGAAGATAAGTTGCATCATCCCGCAGAACAGTTTCCATGTTTTCCTCAAGTAACTACTTCAAATGGTCATGATTTTCAGGGTCAGAGTCAAGAGATGTATTCTGATGAGGAAGAAGAAATTAAAAATATTAAAGGAAAATTGATCAATGCTGAATCTCAAAAGGAAACATTGGAAGGGCAGCTTCAATCAGCTACTGATAGGATTGAGTCCTTAACGGATCAACTTTTGGAATCAGAGAAAACTATTGTCAGCTCAAGACTAGAGTTACAATCCTTAAAAGAATCTTATGGAAAACTTGAGGATCAAATAAAAAATAATACAGTTATGAAATCAGATCTTGATTCACGGCATAAAGGGGCGGAATTAAAAGAGGTCGGTCTCAAGGTTTTGGAATTAGAAGTGGAACTAGAGAACAAGAACCACAGTTGTGAAGAATTAGAGACCAGATGTGTTGAATTGCAACTCCAGCTTGAAAGCATGCCAAAGGAGGGCTCGAACCATGATATTAACCAGAAAGACAAGCCATTGCGAACTGACTTGGAGATAACAGCCGCTTCAGAAAAGTTGGCAGAGTGTCAAGAAACCATCCTTAATCTTGGGAAGCAGCTGAGGTCATTGGCTCCACCAAAGGATGCAGCCCTTTTTGACAATGTTATTGCAGCACAGCCTACCAGTACCACATCCGCCACCACCATCACGACAACAAAAACGAATCCTATCCCTGCTCCCCTGAAAGTTATGAAAACAAAGAATCGATCTTTACTCGATCAGATGCTATCTGAAGATGATACTAAATCCAAGGTTTCCAAAGTAAGTGACCGTGACTCCGATCTCACCACCATTCCAGGCATTATACAACCTCTGGAGAAGATTTTATCTTTGAACGAATTTAAAGCTCCAGATGACAGTGTTACTGCTAATGATTTGGCCATTGTAACTTCTAAGAAACCGGCCATTGTACCTACTAAGAAACCGGGAAGCGGAAGTTTGTGGAAGAAGTTATTATGGAAAAAGAAGAAAAGTGCCAACATGAAAACATCCCTTCCATTGAACACTTGA

Protein sequence

>Msa1296410

MDQKPWPWRKKSSEKTIVTAENANLPSKENGEVHVLLADKEELEKDFKELENKLASALSECNSKDELVKKQTKIAQEAVAGLEKAKVEVLSVKQGLDEALRDRLVYEERVAHLDGALKECMQQLRFVREEQGQRIHDAVMKASKEFEKECMVWEDQLSVTSKRLAKVETENSHLNTSIFAREKLIEDLKKQLTQAEADHSALMIRLESIEKDNASLTYEVRVLEKELEIRNEEREFGRRTADVSHKHHLENVKKIAKLESECQRLRLLVRKRLPGPGSLAKMKNEVEMLGRDSLEIRRNKLNSTSSMVESSLDSSPGTPNRRIDTLTEQLCAVEEENKALKDSLSRKMNELQFSRVMLSRTASKLLQLESHNEESSKGQVAVEQLRSNLCEFSLASMSDIGSDDKVSCADSSASALISDSEHFRSGKQKESWSCRSIGASDINLMDDFVEMEKLAVVSVEKDTEISGASLKEVDEINGFSETRKNETTPDHISDFSTSNKKVSSLDELKDNIPSWLQDVVKMILEQNHVTHKNPDDILENIRVALRNLNNLDPCVFGSDKVSGHIEGYDPSNNSLVVVPSSDVNITDLSPIKRNKQQAHEDLSKSIGKVIELIERINLPAVDCDNSDPLCTSDETVPSVNNSGMPTGYMVRVFQWKTSELSNVLQQFLHVCYDLLNGKVDHEKFAEELTTALDWIMNHCFSLQDVSCMKDAIKKQFDWDETRSESEAEFGMIGHFAGEDKLHHPAEQFPCFPQVTTSNGHDFQGQSQEMYSDEEEEIKNIKGKLINAESQKETLEGQLQSATDRIESLTDQLLESEKTIVSSRLELQSLKESYGKLEDQIKNNTVMKSDLDSRHKGAELKEVGLKVLELEVELENKNHSCEELETRCVELQLQLESMPKEGSNHDINQKDKPLRTDLEITAASEKLAECQETILNLGKQLRSLAPPKDAALFDNVIAAQPTSTTSATTITTTKTNPIPAPLKVMKTKNRSLLDQMLSEDDTKSKVSKVSDRDSDLTTIPGIIQPLEKILSLNEFKAPDDSVTANDLAIVTSKKPAIVPTKKPGSGSLWKKLLWKKKKSANMKTSLPLNT*