Alfalfa Gene Editing Database
Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
---|---|---|---|---|---|---|---|---|---|---|---|
Msa1296410 | XP_013457425.1 | 92.562 | 1089 | 71 | 3 | 1 | 1089 | 1 | 1079 | 0.0 | 1940 |
Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
---|---|---|---|---|---|---|---|---|---|---|---|
Msa1296410 | sp|Q9SLN1|FPP7_ARATH | 45.539 | 751 | 322 | 13 | 1 | 741 | 1 | 674 | 0.0 | 559 |
Msa1296410 | sp|Q9SLN1|FPP7_ARATH | 35.938 | 192 | 84 | 5 | 913 | 1087 | 727 | 896 | 1.22e-17 | 92.4 |
Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
---|---|---|---|---|---|---|---|---|---|---|---|
Msa1296410 | A0A072UQ33 | 92.562 | 1089 | 71 | 3 | 1 | 1089 | 1 | 1079 | 0.0 | 1940 |
Gene ID | Type | Classification |
---|
Gene ID | Type | Classification |
---|
Co-expression Network
Gene1 | Gene2 | correlation coefficient | p_value | FDR |
---|---|---|---|---|
Msa0005890 | Msa1296410 | 0.805335 | 1.402753e-49 | -8.615850e-47 |
Msa0081520 | Msa1296410 | 0.822985 | 1.767032e-53 | -8.615850e-47 |
Msa0626450 | Msa1296410 | 0.858808 | 6.387292e-63 | -8.615850e-47 |
Msa0626490 | Msa1296410 | 0.855679 | 5.366202e-62 | -8.615850e-47 |
Msa0643300 | Msa1296410 | 0.808628 | 2.820483e-50 | -8.615850e-47 |
Msa0664600 | Msa1296410 | 0.856843 | 2.445952e-62 | -8.615850e-47 |
Msa0683570 | Msa1296410 | 0.805389 | 1.366819e-49 | -8.615850e-47 |
Msa0727640 | Msa1296410 | 0.805957 | 1.038855e-49 | -8.615850e-47 |
Msa0742740 | Msa1296410 | 0.807416 | 5.110196e-50 | -8.615850e-47 |
Msa0783530 | Msa1296410 | 0.801424 | 9.061894e-49 | -8.615850e-47 |
Msa0795870 | Msa1296410 | 0.814111 | 1.819244e-51 | -8.615850e-47 |
Msa0823820 | Msa1296410 | 0.814898 | 1.218458e-51 | -8.615850e-47 |
Msa0833650 | Msa1296410 | 0.808305 | 3.306213e-50 | -8.615850e-47 |
Msa0136650 | Msa1296410 | 0.841477 | 4.641104e-58 | -8.615850e-47 |
Msa0152400 | Msa1296410 | 0.801275 | 9.722425e-49 | -8.615850e-47 |
Msa0173890 | Msa1296410 | 0.803569 | 3.275344e-49 | -8.615850e-47 |
Msa0174450 | Msa1296410 | 0.824638 | 7.243045e-54 | -8.615850e-47 |
Msa0225460 | Msa1296410 | 0.840602 | 7.876727e-58 | -8.615850e-47 |
Msa0225680 | Msa1296410 | 0.839789 | 1.284065e-57 | -8.615850e-47 |
Msa1234710 | Msa1296410 | 0.842560 | 2.400276e-58 | -8.615850e-47 |
Msa1269480 | Msa1296410 | 0.801529 | 8.625885e-49 | -8.615850e-47 |
Msa1296410 | Msa1315130 | 0.806202 | 9.224146e-50 | -8.615850e-47 |
Msa1296410 | Msa1320670 | 0.815430 | 9.284643e-52 | -8.615850e-47 |
Msa1296410 | Msa1348090 | 0.801212 | 1.001592e-48 | -8.615850e-47 |
Msa1296410 | Msa1356830 | 0.826840 | 2.174801e-54 | -8.615850e-47 |
Msa1296410 | Msa1422420 | 0.824750 | 6.814707e-54 | -8.615850e-47 |
Msa1296410 | Msa1440960 | 0.858019 | 1.097607e-62 | -8.615850e-47 |
Msa1296410 | Msa1443600 | 0.802246 | 6.145149e-49 | -8.615850e-47 |
Msa1296410 | Msa1454140 | 0.811627 | 6.368249e-51 | -8.615850e-47 |
Msa1296410 | Msa1459460 | 0.802192 | 6.305255e-49 | -8.615850e-47 |
Msa0378720 | Msa1296410 | 0.816124 | 6.498830e-52 | -8.615850e-47 |
Msa0380620 | Msa1296410 | 0.838305 | 3.112536e-57 | -8.615850e-47 |
Msa0397150 | Msa1296410 | 0.805605 | 1.231516e-49 | -8.615850e-47 |
Msa0417880 | Msa1296410 | 0.815803 | 7.666471e-52 | -8.615850e-47 |
Msa0428370 | Msa1296410 | 0.832530 | 8.970066e-56 | -8.615850e-47 |
Msa0430260 | Msa1296410 | 0.853365 | 2.507386e-61 | -8.615850e-47 |
Msa0467430 | Msa1296410 | 0.825938 | 3.567164e-54 | -8.615850e-47 |
Msa0474730 | Msa1296410 | 0.832833 | 7.545118e-56 | -8.615850e-47 |
Msa0267110 | Msa1296410 | 0.809273 | 2.052733e-50 | -8.615850e-47 |
Msa0349710 | Msa1296410 | 0.811047 | 8.512486e-51 | -8.615850e-47 |
Msa1113340 | Msa1296410 | 0.820037 | 8.476438e-53 | -8.615850e-47 |
Msa1124950 | Msa1296410 | 0.805316 | 1.415964e-49 | -8.615850e-47 |
Msa1132840 | Msa1296410 | 0.810611 | 1.057449e-50 | -8.615850e-47 |
Msa1174840 | Msa1296410 | 0.810327 | 1.217948e-50 | -8.615850e-47 |
Msa0483100 | Msa1296410 | 0.807220 | 5.621848e-50 | -8.615850e-47 |
Msa0500380 | Msa1296410 | 0.833180 | 6.184776e-56 | -8.615850e-47 |
Msa0527860 | Msa1296410 | 0.801496 | 8.762788e-49 | -8.615850e-47 |
Msa0528570 | Msa1296410 | 0.800576 | 1.350919e-48 | -8.615850e-47 |
Msa0538500 | Msa1296410 | 0.801475 | 8.846760e-49 | -8.615850e-47 |
Msa0580370 | Msa1296410 | 0.809608 | 1.740050e-50 | -8.615850e-47 |
Msa0600930 | Msa1296410 | 0.838791 | 2.330700e-57 | -8.615850e-47 |
Msa0861600 | Msa1296410 | 0.800782 | 1.226470e-48 | -8.615850e-47 |
Msa0863010 | Msa1296410 | 0.807161 | 5.785126e-50 | -8.615850e-47 |
PPI
Gene1 | Gene2 | Type |
---|
Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
---|---|---|---|---|---|---|---|---|---|---|---|
Msa1296410 | MtrunA17_Chr4g0053121 | 92.562 | 1089 | 71 | 3 | 1 | 1089 | 1 | 1079 | 0.0 | 1940 |
Msa1296410 | MtrunA17_Chr5g0401911 | 48.098 | 736 | 247 | 16 | 349 | 1077 | 231 | 838 | 0.0 | 572 |
Msa1296410 | MtrunA17_Chr5g0401911 | 62.185 | 238 | 89 | 1 | 1 | 238 | 1 | 237 | 6.15e-82 | 285 |
Msa1296410 | MtrunA17_Chr4g0044561 | 34.324 | 1110 | 589 | 27 | 1 | 1083 | 1 | 997 | 2.19e-146 | 464 |
Msa1296410 | MtrunA17_Chr3g0142411 | 40.961 | 437 | 239 | 6 | 43 | 463 | 90 | 523 | 5.35e-77 | 275 |
Msa1296410 | MtrunA17_Chr1g0156371 | 36.197 | 547 | 286 | 12 | 1 | 494 | 1 | 537 | 6.10e-75 | 269 |
Msa1296410 | MtrunA17_Chr5g0405291 | 35.050 | 505 | 254 | 11 | 1 | 458 | 1 | 478 | 5.19e-60 | 220 |
Msa1296410 | MtrunA17_Chr8g0384881 | 37.417 | 302 | 129 | 5 | 1 | 271 | 1 | 273 | 5.00e-41 | 161 |
Msa1296410 | MtrunA17_Chr1g0159951 | 35.983 | 239 | 128 | 2 | 33 | 271 | 130 | 343 | 1.07e-31 | 134 |
Msa1296410 | MtrunA17_Chr3g0130811 | 37.190 | 242 | 113 | 5 | 38 | 271 | 47 | 257 | 3.69e-30 | 128 |
Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
---|---|---|---|---|---|---|---|---|---|---|---|
Msa1296410 | AT2G23360.1 | 45.539 | 751 | 322 | 13 | 1 | 741 | 1 | 674 | 0.0 | 559 |
Msa1296410 | AT2G23360.1 | 35.938 | 192 | 84 | 5 | 913 | 1087 | 727 | 896 | 1.24e-18 | 92.4 |
Msa1296410 | AT1G19835.6 | 38.788 | 495 | 259 | 9 | 1 | 457 | 1 | 489 | 7.60e-78 | 276 |
Msa1296410 | AT1G19835.5 | 38.788 | 495 | 259 | 9 | 1 | 457 | 1 | 489 | 7.60e-78 | 276 |
Msa1296410 | AT1G19835.3 | 38.788 | 495 | 259 | 9 | 1 | 457 | 1 | 489 | 7.60e-78 | 276 |
Msa1296410 | AT1G19835.1 | 38.788 | 495 | 259 | 9 | 1 | 457 | 1 | 489 | 7.60e-78 | 276 |
Msa1296410 | AT1G19835.4 | 38.788 | 495 | 259 | 9 | 1 | 457 | 1 | 489 | 7.60e-78 | 276 |
Msa1296410 | AT1G19835.2 | 38.788 | 495 | 259 | 9 | 1 | 457 | 1 | 489 | 7.60e-78 | 276 |
Msa1296410 | AT1G47900.3 | 28.148 | 945 | 555 | 25 | 33 | 945 | 101 | 953 | 1.54e-74 | 268 |
Msa1296410 | AT1G47900.1 | 28.148 | 945 | 555 | 25 | 33 | 945 | 101 | 953 | 1.54e-74 | 268 |
Msa1296410 | AT1G47900.2 | 37.727 | 440 | 254 | 6 | 33 | 457 | 101 | 535 | 2.77e-66 | 243 |
Msa1296410 | AT4G36120.2 | 35.141 | 498 | 276 | 10 | 1 | 454 | 1 | 495 | 6.11e-62 | 229 |
Msa1296410 | AT4G36120.1 | 35.141 | 498 | 276 | 10 | 1 | 454 | 1 | 495 | 6.11e-62 | 229 |
Msa1296410 | AT1G77580.4 | 37.500 | 232 | 110 | 2 | 39 | 270 | 20 | 216 | 3.02e-33 | 138 |
Msa1296410 | AT1G77580.2 | 37.500 | 232 | 110 | 2 | 39 | 270 | 54 | 250 | 3.35e-33 | 139 |
Msa1296410 | AT1G77580.3 | 37.500 | 232 | 110 | 2 | 39 | 270 | 54 | 250 | 3.35e-33 | 139 |
Msa1296410 | AT1G77580.1 | 39.224 | 232 | 106 | 3 | 39 | 270 | 20 | 216 | 3.78e-33 | 137 |
Msa1296410 | AT3G05270.3 | 30.719 | 306 | 173 | 4 | 1 | 294 | 1 | 279 | 3.92e-31 | 130 |
Msa1296410 | AT3G05270.2 | 30.719 | 306 | 173 | 4 | 1 | 294 | 1 | 279 | 3.92e-31 | 130 |
Msa1296410 | AT3G05270.1 | 30.719 | 306 | 173 | 4 | 1 | 294 | 1 | 279 | 3.92e-31 | 130 |
Msa1296410 | AT3G19370.3 | 30.102 | 392 | 165 | 10 | 155 | 545 | 143 | 426 | 4.97e-31 | 131 |
Msa1296410 | AT3G19370.3 | 30.986 | 284 | 128 | 9 | 802 | 1082 | 480 | 698 | 1.23e-15 | 82.4 |
Msa1296410 | AT3G19370.1 | 30.102 | 392 | 165 | 10 | 155 | 545 | 143 | 426 | 4.97e-31 | 131 |
Msa1296410 | AT3G19370.1 | 30.986 | 284 | 128 | 9 | 802 | 1082 | 480 | 698 | 1.23e-15 | 82.4 |
Msa1296410 | AT3G19370.2 | 30.102 | 392 | 165 | 10 | 155 | 545 | 143 | 426 | 4.97e-31 | 131 |
Msa1296410 | AT3G19370.2 | 30.986 | 284 | 128 | 9 | 802 | 1082 | 480 | 698 | 1.23e-15 | 82.4 |
Msa1296410 | AT1G21810.3 | 37.799 | 209 | 88 | 4 | 62 | 270 | 14 | 180 | 2.92e-25 | 112 |
Msa1296410 | AT1G21810.1 | 37.799 | 209 | 88 | 4 | 62 | 270 | 14 | 180 | 2.92e-25 | 112 |
Find 222 sgRNAs with CRISPR-Local
Find 375 sgRNAs with CRISPR-GE
CRISPR-Local
sgRNA_sequence | on_target_score | Position | Region |
---|---|---|---|
TGCTGTTTGTTTCTCTTTAT+TGG | 0.078910 | 8_3:+55813336 | None:intergenic |
TTCGCAATGGCTTGTCTTTC+TGG | 0.087478 | 8_3:+55812282 | None:intergenic |
CTGCAATAACATTGTCAAAA+AGG | 0.211384 | 8_3:+55811105 | None:intergenic |
TTACATTCTTCTTAGCATTA+TGG | 0.247487 | 8_3:-55815641 | Msa1296410:exon |
CAAAGTATCGATTCTTCTAT+TGG | 0.248764 | 8_3:+55814148 | None:intergenic |
GTTTGTGGAAGAAGTTATTA+TGG | 0.255118 | 8_3:-55810758 | Msa1296410:CDS |
CAAATTCTCTCTCTTCATTT+CGG | 0.261599 | 8_3:+55814417 | None:intergenic |
GTCCTTAACGGATCAACTTT+TGG | 0.276773 | 8_3:-55812686 | Msa1296410:CDS |
AGAGGTCGGTCTCAAGGTTT+TGG | 0.284127 | 8_3:-55812524 | Msa1296410:CDS |
TTCCACAAACTTCCGCTTCC+CGG | 0.295489 | 8_3:+55810771 | None:intergenic |
AATCTCCCTTCAAAAGAAAA+TGG | 0.309230 | 8_3:-55815553 | Msa1296410:CDS |
TGTCTTTCTGGTTAATATCA+TGG | 0.309747 | 8_3:+55812294 | None:intergenic |
CAATCCTTAAAAGAATCTTA+TGG | 0.311961 | 8_3:-55812625 | Msa1296410:CDS |
AGCGAAAGTGAAGCAGAGTT+TGG | 0.313969 | 8_3:-55812937 | Msa1296410:CDS |
TGATCCTTCAAATAACTCTT+TGG | 0.316192 | 8_3:-55813400 | Msa1296410:CDS |
CGAAATGAAGAGAGAGAATT+TGG | 0.316984 | 8_3:-55814416 | Msa1296410:CDS |
TTGGCATCAATGTCTGATAT+TGG | 0.327469 | 8_3:-55813924 | Msa1296410:CDS |
TCAATCTCATATCTCTTTAG+AGG | 0.331509 | 8_3:-55816119 | Msa1296410:intron |
TAACATTCCCAGTTGGCTTC+AGG | 0.333343 | 8_3:-55813574 | Msa1296410:CDS |
TCAGCTGCTTCCCAAGATTA+AGG | 0.339508 | 8_3:+55811156 | None:intergenic |
CATGGATGACTTTGTTGAAA+TGG | 0.341756 | 8_3:-55813772 | Msa1296410:CDS |
TAACCTTTGTGAGTTCTCTT+TGG | 0.342154 | 8_3:-55813943 | Msa1296410:CDS |
TCTTGCTGATAAAGAAGAAT+TGG | 0.350215 | 8_3:-55815136 | Msa1296410:CDS |
AGTTATCCGTGACAAGTAAA+AGG | 0.351743 | 8_3:-55814637 | Msa1296410:CDS |
CAAGAAACCATCCTTAATCT+TGG | 0.356322 | 8_3:-55811167 | Msa1296410:CDS |
GTGTCAGAGATTGCGCCTTC+TGG | 0.356686 | 8_3:-55814321 | Msa1296410:CDS |
GTACCCTCAGTAAATAATTC+AGG | 0.357209 | 8_3:-55813198 | Msa1296410:CDS |
TACTACATCCTGAAGCCAAC+TGG | 0.357862 | 8_3:+55813566 | None:intergenic |
TTCTGCATTGATTTCAGATT+CGG | 0.358960 | 8_3:-55813865 | Msa1296410:CDS |
CCGCTTCCCGGTTTCTTAGT+AGG | 0.365002 | 8_3:+55810783 | None:intergenic |
AATCTAGATCCGTGCGTCTT+TGG | 0.365024 | 8_3:-55813456 | Msa1296410:CDS |
AAAGCATTACTCTTGAGAAT+TGG | 0.371530 | 8_3:+55814051 | None:intergenic |
TCCGATCTCACCACCATTCC+AGG | 0.374557 | 8_3:-55810918 | Msa1296410:CDS |
ATCTTGATTCACGGCATAAA+GGG | 0.376834 | 8_3:-55812558 | Msa1296410:CDS |
GATCTTGATTCACGGCATAA+AGG | 0.378099 | 8_3:-55812559 | Msa1296410:CDS |
AAAGTATCGATTCTTCTATT+GGG | 0.379720 | 8_3:+55814149 | None:intergenic |
ACTTGTTCCTTCTTATTTCA+AGG | 0.384785 | 8_3:+55814225 | None:intergenic |
CTATCAAGAAACAATTTGAT+TGG | 0.384907 | 8_3:-55812972 | Msa1296410:CDS |
TCTTCACTTGACAGTTCTCC+TGG | 0.388800 | 8_3:-55814176 | Msa1296410:CDS |
TGAAGAAAGAGTAGCCCATT+TGG | 0.391774 | 8_3:-55814786 | Msa1296410:CDS |
ATGAAAATGTAAATGATGTT+TGG | 0.396016 | 8_3:+55816216 | None:intergenic |
AGGTCTGGATGAAGCTTTGC+GGG | 0.398196 | 8_3:-55814822 | Msa1296410:CDS |
TTCCAAAAGTTGATCCGTTA+AGG | 0.403468 | 8_3:+55812684 | None:intergenic |
TTCATAACTTTCAGGGGAGC+AGG | 0.404170 | 8_3:+55811023 | None:intergenic |
GGAGTCACGGTCACTTACTT+TGG | 0.404277 | 8_3:+55810938 | None:intergenic |
CATTGTACCTACTAAGAAAC+CGG | 0.419244 | 8_3:-55810790 | Msa1296410:CDS |
GACTACCCCTGATCACATTT+CGG | 0.431865 | 8_3:-55813646 | Msa1296410:CDS |
TGCGCCTTCTGGTTCGGAAA+CGG | 0.432770 | 8_3:-55814310 | Msa1296410:CDS |
TCATGGTTCGAGCCCTCCTT+TGG | 0.433128 | 8_3:+55812311 | None:intergenic |
CCTCAAGTAACTACTTCAAA+TGG | 0.436735 | 8_3:-55812850 | Msa1296410:CDS |
CCTTCAGAGCTCCATCCAAA+TGG | 0.438475 | 8_3:+55814771 | None:intergenic |
GGTGGTGGCGGATGTGGTAC+TGG | 0.439445 | 8_3:+55811073 | None:intergenic |
GTCACTTACTTTGGAAACCT+TGG | 0.443153 | 8_3:+55810947 | None:intergenic |
CAGTGTTACTGCTAATGATT+TGG | 0.444242 | 8_3:-55810838 | Msa1296410:CDS |
TTTGGTTCCGACAAAGTCTC+TGG | 0.446495 | 8_3:-55813438 | Msa1296410:CDS |
GAGAAGTCCGAAATGTGATC+AGG | 0.446564 | 8_3:+55813639 | None:intergenic |
AAAGAAGTTGATGAGATCAA+TGG | 0.447443 | 8_3:-55813693 | Msa1296410:CDS |
AGAGATTGCGCCTTCTGGTT+CGG | 0.447959 | 8_3:-55814316 | Msa1296410:CDS |
CATTGTAACTTCTAAGAAAC+CGG | 0.448338 | 8_3:-55810814 | Msa1296410:CDS |
TCAGGATGTTTCTTGTATGA+AGG | 0.449394 | 8_3:-55812998 | Msa1296410:CDS |
CTGACACTCTGATTCTAACT+TGG | 0.449595 | 8_3:+55814337 | None:intergenic |
GCGAAAGTGAAGCAGAGTTT+GGG | 0.451171 | 8_3:-55812936 | Msa1296410:CDS |
AGCAAAAGTTGAAGTGTTGT+CGG | 0.451282 | 8_3:-55814852 | Msa1296410:CDS |
GTCAGTAATATTTACATCAC+TGG | 0.452498 | 8_3:+55813365 | None:intergenic |
TGATAGGATTGAGTCCTTAA+CGG | 0.453872 | 8_3:-55812698 | Msa1296410:CDS |
GAGTTGCAATTCAACACATC+TGG | 0.456191 | 8_3:+55812450 | None:intergenic |
AACTAACAACAGCTTTGGAT+TGG | 0.456338 | 8_3:-55813044 | Msa1296410:CDS |
TGAAGAACTAACAACAGCTT+TGG | 0.456722 | 8_3:-55813049 | Msa1296410:CDS |
GAAGACCTGAGTAAGTCAAT+AGG | 0.458201 | 8_3:-55813306 | Msa1296410:CDS |
ATTAGAAAATAAGCTTGCTT+CGG | 0.458274 | 8_3:-55815097 | Msa1296410:CDS |
AAGGGAAAGAAGTGAAAAGA+TGG | 0.459864 | 8_3:+55816317 | None:intergenic |
GTTAAACTCAACTAGTTCAA+TGG | 0.460981 | 8_3:-55814204 | Msa1296410:CDS |
TATCAAGAAACAATTTGATT+GGG | 0.464261 | 8_3:-55812971 | Msa1296410:CDS |
TGCGACTTTCAAGTGTTCAA+TGG | 0.464365 | 8_3:+55810699 | None:intergenic |
TCCAGAGGTTGTATAATGCC+TGG | 0.464954 | 8_3:+55810900 | None:intergenic |
AAGAAACCATCCTTAATCTT+GGG | 0.465020 | 8_3:-55811166 | Msa1296410:CDS |
CAACAGAGAGAGTGTGTGTT+TGG | 0.466141 | 8_3:+55816280 | None:intergenic |
CGTGATGGTGGTGGCGGATG+TGG | 0.469826 | 8_3:+55811067 | None:intergenic |
TGGGAAGCAGCTGAGGTCAT+TGG | 0.471135 | 8_3:-55811147 | Msa1296410:CDS |
GTGTGTGTTTGGTGAGAGAA+AGG | 0.471339 | 8_3:+55816291 | None:intergenic |
GATCAATGCTGAATCTCAAA+AGG | 0.476356 | 8_3:-55812752 | Msa1296410:CDS |
AATTGCAACTCCAGCTTGAA+AGG | 0.476438 | 8_3:-55812438 | Msa1296410:intron |
TCCAGGCATTATACAACCTC+TGG | 0.478551 | 8_3:-55810901 | Msa1296410:CDS |
CTTCAGAAGTGGAAAACAAA+AGG | 0.479195 | 8_3:-55813838 | Msa1296410:CDS |
ACCACCAAAGAGTTATTTGA+AGG | 0.479471 | 8_3:+55813396 | None:intergenic |
TGAAGCTTTGCGGGACAGAT+TGG | 0.480204 | 8_3:-55814813 | Msa1296410:CDS |
AAAGTCTCTGGTCATATTGA+AGG | 0.480911 | 8_3:-55813426 | Msa1296410:CDS |
CGGAAACGGTTACCAGGTCC+TGG | 0.484770 | 8_3:-55814296 | Msa1296410:CDS |
ATCTTCCCTTGATGAACTAA+AGG | 0.486259 | 8_3:-55813598 | Msa1296410:CDS |
CTTGTTCCTTCTTATTTCAA+GGG | 0.487122 | 8_3:+55814226 | None:intergenic |
TCATGGTCCTGCAGAAGCAT+TGG | 0.487131 | 8_3:-55813813 | Msa1296410:CDS |
TGACGGAGTGAGTGTGTTGT+TGG | 0.487446 | 8_3:+55816369 | None:intergenic |
GAAGCAGAGTTTGGGATGAT+AGG | 0.487695 | 8_3:-55812928 | Msa1296410:CDS |
TTAGCAGTAACACTGTCATC+TGG | 0.489817 | 8_3:+55810846 | None:intergenic |
AGTGAAGACCAGACACTAAG+AGG | 0.490486 | 8_3:+55810550 | None:intergenic |
GTGGAAAACAAAAGGAATCA+TGG | 0.494775 | 8_3:-55813830 | Msa1296410:CDS |
TGTTATCCTTTAGTTCATCA+AGG | 0.494969 | 8_3:+55813592 | None:intergenic |
AGAATATTAGAGTAGCTTTG+AGG | 0.496510 | 8_3:-55813488 | Msa1296410:CDS |
TGAAGCTCCAATGCTTCTGC+AGG | 0.497457 | 8_3:+55813806 | None:intergenic |
AGAAGCATTATCTTTCTCAA+TGG | 0.498267 | 8_3:+55814481 | None:intergenic |
GTTACCAGGTCCTGGTTCCC+TGG | 0.500382 | 8_3:-55814288 | Msa1296410:CDS |
TTGGTGAGAGAAAGGGAAAA+GGG | 0.502134 | 8_3:+55816299 | None:intergenic |
AACCGGGAAGCGGAAGTTTG+TGG | 0.503170 | 8_3:-55810773 | Msa1296410:CDS |
ACTTTCAGGGGAGCAGGGAT+AGG | 0.504663 | 8_3:+55811029 | None:intergenic |
CTGGTTCGGAAACGGTTACC+AGG | 0.505039 | 8_3:-55814302 | Msa1296410:CDS |
AATAATTCAGGAATGCCAAC+GGG | 0.505739 | 8_3:-55813186 | Msa1296410:CDS |
GAGATTCCCTTGAAATAAGA+AGG | 0.508635 | 8_3:-55814232 | Msa1296410:CDS |
AACAGCCGCTTCAGAAAAGT+TGG | 0.508979 | 8_3:-55811198 | Msa1296410:CDS |
CCATTTGGATGGAGCTCTGA+AGG | 0.512295 | 8_3:-55814771 | Msa1296410:CDS |
CTTCAGAGCTCCATCCAAAT+GGG | 0.513136 | 8_3:+55814772 | None:intergenic |
CGTTAAAAGATTCCCTAAGT+AGG | 0.514403 | 8_3:-55814088 | Msa1296410:CDS |
AATACGTACTTACTGAAGAA+AGG | 0.516486 | 8_3:-55810649 | Msa1296410:three_prime_UTR |
CCTTTCCTATTGACTTACTC+AGG | 0.517300 | 8_3:+55813301 | None:intergenic |
TTTGGTGAGAGAAAGGGAAA+AGG | 0.519485 | 8_3:+55816298 | None:intergenic |
TGTTTCTCTTTATTGGTGAG+AGG | 0.519827 | 8_3:+55813343 | None:intergenic |
AGACGTGTCCTCTTAGTGTC+TGG | 0.521081 | 8_3:-55810558 | Msa1296410:three_prime_UTR |
GTGTGTTATGATTTACTGAA+TGG | 0.521589 | 8_3:-55813096 | Msa1296410:CDS |
AGCTTCAGACATAAATCTCA+TGG | 0.522285 | 8_3:-55813790 | Msa1296410:CDS |
TCAATGGCTTCTCAGAAACT+AGG | 0.522844 | 8_3:-55813677 | Msa1296410:CDS |
AAACATGGAAACTGTTCTGC+GGG | 0.522978 | 8_3:+55812874 | None:intergenic |
ATCCGTGACAAGTAAAAGGC+TGG | 0.523603 | 8_3:-55814633 | Msa1296410:CDS |
AAGATGGGAAAGTGAAGAGT+GGG | 0.524676 | 8_3:+55816333 | None:intergenic |
CGATTTGTTCGAGAAGAACA+AGG | 0.524891 | 8_3:-55814731 | Msa1296410:CDS |
AGCTTCAATCAGCTACTGAT+AGG | 0.524963 | 8_3:-55812714 | Msa1296410:CDS |
ATAGGTCTTACCTTTCAAGC+TGG | 0.525592 | 8_3:+55812428 | None:intergenic |
GTGGCGGATGTGGTACTGGT+AGG | 0.526670 | 8_3:+55811077 | None:intergenic |
TCCTTCAAATAACTCTTTGG+TGG | 0.527792 | 8_3:-55813397 | Msa1296410:CDS |
AATATGACCAGAGACTTTGT+CGG | 0.528015 | 8_3:+55813431 | None:intergenic |
AAGAATCAACTTGCCTGCTG+TGG | 0.528599 | 8_3:-55813262 | Msa1296410:CDS |
TGAAATCAGATCTTGATTCA+CGG | 0.529274 | 8_3:-55812567 | Msa1296410:CDS |
AAAAGGGCTGCATCCTTTGG+TGG | 0.530109 | 8_3:+55811122 | None:intergenic |
CATAATGAAGAATCATCTAA+AGG | 0.532662 | 8_3:-55813993 | Msa1296410:CDS |
GAGAAAGACACTGAAATCTC+TGG | 0.532861 | 8_3:-55813726 | Msa1296410:CDS |
CTGCTTCCCAAGATTAAGGA+TGG | 0.533937 | 8_3:+55811160 | None:intergenic |
AGGAATGCCAACGGGCTACA+TGG | 0.535263 | 8_3:-55813178 | Msa1296410:CDS |
GAAAGAGTAGCCCATTTGGA+TGG | 0.535573 | 8_3:-55814782 | Msa1296410:CDS |
GCCTGGAATGGTGGTGAGAT+CGG | 0.542225 | 8_3:+55810917 | None:intergenic |
TGTTGTCGTGATGGTGGTGG+CGG | 0.542398 | 8_3:+55811061 | None:intergenic |
ATATTCTCGAGTATATCATC+AGG | 0.542580 | 8_3:+55813504 | None:intergenic |
ATTCCTGAATTATTTACTGA+GGG | 0.542973 | 8_3:+55813195 | None:intergenic |
CCGAGTGCTTGAAAAGGAGT+TGG | 0.544074 | 8_3:-55814444 | Msa1296410:CDS |
GTGTAATTCTAAAGACGAGC+TGG | 0.545543 | 8_3:-55815064 | Msa1296410:CDS |
TTCGAGAAGAACAAGGGCAA+AGG | 0.547361 | 8_3:-55814724 | Msa1296410:CDS |
ACTTTCAAGTGTTCAATGGA+AGG | 0.547509 | 8_3:+55810703 | None:intergenic |
AGGGAAAGAAGTGAAAAGAT+GGG | 0.547589 | 8_3:+55816318 | None:intergenic |
GATTCGGAGCACTTCAGAAG+TGG | 0.547858 | 8_3:-55813849 | Msa1296410:CDS |
GTTGTCGGTGAAGCAAGGTC+TGG | 0.549630 | 8_3:-55814837 | Msa1296410:CDS |
ATTCTTCTATTGGGAGTCCC+AGG | 0.550407 | 8_3:+55814158 | None:intergenic |
ATTAAAAGAGGTCGGTCTCA+AGG | 0.553721 | 8_3:-55812530 | Msa1296410:CDS |
TGAGGTCCGAGTGCTTGAAA+AGG | 0.553776 | 8_3:-55814450 | Msa1296410:CDS |
TTCTTAGTAGGTACAATGGC+CGG | 0.554541 | 8_3:+55810795 | None:intergenic |
GATTCATGATGCTGTGATGA+AGG | 0.557033 | 8_3:-55814702 | Msa1296410:CDS |
AGTCTCATCACTTGTGCACA+AGG | 0.557335 | 8_3:+55813221 | None:intergenic |
TGAATCTCAAAAGGAAACAT+TGG | 0.560533 | 8_3:-55812743 | Msa1296410:CDS |
TGTTCTCAGCATGCCAAAGG+AGG | 0.561256 | 8_3:-55812324 | Msa1296410:intron |
TAATGCTTCTCTGACATATG+AGG | 0.561537 | 8_3:-55814468 | Msa1296410:CDS |
GAGGTCATTGGCTCCACCAA+AGG | 0.561831 | 8_3:-55811135 | Msa1296410:CDS |
TTTGCCAGGGAACCAGGACC+TGG | 0.563279 | 8_3:+55814284 | None:intergenic |
CGGTTTCTTAGTAGGTACAA+TGG | 0.565201 | 8_3:+55810791 | None:intergenic |
TCTAAAGAGATATGAGATTG+AGG | 0.565695 | 8_3:+55816121 | None:intergenic |
ATTGCACAAGAAGCAGTGGC+AGG | 0.569097 | 8_3:-55815024 | Msa1296410:intron |
AAGGTCTGGATGAAGCTTTG+CGG | 0.572407 | 8_3:-55814823 | Msa1296410:CDS |
ACTACATCCTGAAGCCAACT+GGG | 0.574852 | 8_3:+55813567 | None:intergenic |
CCATTTGAAGTAGTTACTTG+AGG | 0.575575 | 8_3:+55812850 | None:intergenic |
CTTTCAAGTGTTCAATGGAA+GGG | 0.576556 | 8_3:+55810704 | None:intergenic |
AAAGATGGGAAAGTGAAGAG+TGG | 0.576595 | 8_3:+55816332 | None:intergenic |
AGAAGTCCGAAATGTGATCA+GGG | 0.576910 | 8_3:+55813640 | None:intergenic |
GTTATCCTTTAGTTCATCAA+GGG | 0.578574 | 8_3:+55813593 | None:intergenic |
CATTCCTGAATTATTTACTG+AGG | 0.578669 | 8_3:+55813194 | None:intergenic |
ATCTAAAGGTCAAGTTGCTG+TGG | 0.578768 | 8_3:-55813979 | Msa1296410:CDS |
GAATTATCACAATCCACAGC+AGG | 0.579190 | 8_3:+55813249 | None:intergenic |
TCAAGAGATGTATTCTGATG+AGG | 0.579393 | 8_3:-55812806 | Msa1296410:CDS |
TCATAACTTTCAGGGGAGCA+GGG | 0.581223 | 8_3:+55811024 | None:intergenic |
GGTTAGCTGTGCTGACTCCT+CGG | 0.581274 | 8_3:-55813889 | Msa1296410:CDS |
CTTCACTTGACAGTTCTCCT+GGG | 0.587869 | 8_3:-55814175 | Msa1296410:CDS |
GGTGATAGTAAGTGTCGGCT+TGG | 0.589706 | 8_3:+55816431 | None:intergenic |
AGAATCTTATGGAAAACTTG+AGG | 0.592051 | 8_3:-55812614 | Msa1296410:CDS |
TTAATCTTGGGAAGCAGCTG+AGG | 0.592805 | 8_3:-55811154 | Msa1296410:CDS |
GATAAACTTACAGTTCGCAA+TGG | 0.595440 | 8_3:+55812269 | None:intergenic |
TCTCAAAAGGAAACATTGGA+AGG | 0.596127 | 8_3:-55812739 | Msa1296410:CDS |
CCTGAGTAAGTCAATAGGAA+AGG | 0.596363 | 8_3:-55813301 | Msa1296410:CDS |
GTTCTCAGCATGCCAAAGGA+GGG | 0.598290 | 8_3:-55812323 | Msa1296410:intron |
TGTGTGTTTGGTGAGAGAAA+GGG | 0.600796 | 8_3:+55816292 | None:intergenic |
CGGTTTCTTAGAAGTTACAA+TGG | 0.601137 | 8_3:+55810815 | None:intergenic |
TGAAGATGATACTAAATCCA+AGG | 0.601228 | 8_3:-55810964 | Msa1296410:CDS |
AAAAGAGTGCATGGTTTGGG+AGG | 0.602469 | 8_3:-55814663 | Msa1296410:CDS |
TAAAGGATAACATTCCCAGT+TGG | 0.608418 | 8_3:-55813581 | Msa1296410:CDS |
AAAGATAAAATCTTCTCCAG+AGG | 0.609414 | 8_3:+55810885 | None:intergenic |
GAAGTGTTGTCGGTGAAGCA+AGG | 0.611312 | 8_3:-55814842 | Msa1296410:CDS |
CCTACTAAGAAACCGGGAAG+CGG | 0.611824 | 8_3:-55810783 | Msa1296410:CDS |
TGGTGGTGAGATCGGAGTCA+CGG | 0.613950 | 8_3:+55810925 | None:intergenic |
CTCAAAAGGAAACATTGGAA+GGG | 0.614996 | 8_3:-55812738 | Msa1296410:CDS |
AAATAATTCAGGAATGCCAA+CGG | 0.615232 | 8_3:-55813187 | Msa1296410:CDS |
TTGTATAATGCCTGGAATGG+TGG | 0.616953 | 8_3:+55810908 | None:intergenic |
AAGAGAGAGAATTTGGTCGT+CGG | 0.617107 | 8_3:-55814409 | Msa1296410:CDS |
TAAAGGGGCGGAATTAAAAG+AGG | 0.618771 | 8_3:-55812542 | Msa1296410:CDS |
TCTTGATTCACGGCATAAAG+GGG | 0.619029 | 8_3:-55812557 | Msa1296410:CDS |
TAATGTTCTCAGCATGCCAA+AGG | 0.619696 | 8_3:-55812327 | Msa1296410:intron |
GTAATATTTACATCACTGGA+TGG | 0.620257 | 8_3:+55813369 | None:intergenic |
GTAGTTACTTGAGGAAAACA+TGG | 0.620760 | 8_3:+55812859 | None:intergenic |
TCTCTAATTCTTCACAACTG+TGG | 0.621010 | 8_3:+55812473 | None:intergenic |
TGGGAGTCAAGAGAAAATGA+CGG | 0.622687 | 8_3:+55816352 | None:intergenic |
TGAAATCAATGCAGAAGCCG+AGG | 0.632280 | 8_3:+55813872 | None:intergenic |
TAAAATTGCACAAGAAGCAG+TGG | 0.633283 | 8_3:-55815028 | Msa1296410:CDS |
TTATGATTTACTGAATGGCA+AGG | 0.634162 | 8_3:-55813091 | Msa1296410:CDS |
GTCTCATCACTTGTGCACAA+GGG | 0.644115 | 8_3:+55813222 | None:intergenic |
ACACGGACCATGTAGCCCGT+TGG | 0.651352 | 8_3:+55813171 | None:intergenic |
GGGGCGGAATTAAAAGAGGT+CGG | 0.656076 | 8_3:-55812538 | Msa1296410:CDS |
AAAACATGGAAACTGTTCTG+CGG | 0.658488 | 8_3:+55812873 | None:intergenic |
GATTTGTTCGAGAAGAACAA+GGG | 0.659287 | 8_3:-55814730 | Msa1296410:CDS |
AAAACAATTGACTCAAGCTG+AGG | 0.660596 | 8_3:-55814537 | Msa1296410:CDS |
AGGTTGTATAATGCCTGGAA+TGG | 0.662462 | 8_3:+55810905 | None:intergenic |
TGATATTGGCAGTGATGACA+AGG | 0.666015 | 8_3:-55813910 | Msa1296410:CDS |
TGATTCACGGCATAAAGGGG+CGG | 0.666471 | 8_3:-55812554 | Msa1296410:CDS |
CCCTTCAAAAGAAAATGGAG+AGG | 0.668455 | 8_3:-55815548 | Msa1296410:intron |
TTGTTGGTGAGAACAGAGAG+AGG | 0.669117 | 8_3:+55816385 | None:intergenic |
TTGTCGGAACCAAAGACGCA+CGG | 0.676067 | 8_3:+55813447 | None:intergenic |
ATTGTACCTACTAAGAAACC+GGG | 0.677949 | 8_3:-55810789 | Msa1296410:CDS |
AGGGTGGTGATAGTAAGTGT+CGG | 0.685730 | 8_3:+55816426 | None:intergenic |
GTAACCGTTTCCGAACCAGA+AGG | 0.688384 | 8_3:+55814306 | None:intergenic |
GAAGTCCGAAATGTGATCAG+GGG | 0.700628 | 8_3:+55813641 | None:intergenic |
ATGCCAAAGAGAACTCACAA+AGG | 0.713190 | 8_3:+55813940 | None:intergenic |
CRISPR-GE
badsite warning | sgRNA_sequence | Strand | Position | Region | GC_content |
---|---|---|---|---|---|
!! | TCAAAAAAAAAAAAAATAGA+AGG | + | chr8_3:55810938-55810957 | None:intergenic | 10.0% |
!! | AGATAAATAAATGAATAAAA+AGG | + | chr8_3:55811637-55811656 | None:intergenic | 10.0% |
!! | GAAGAAATTAAAAATATTAA+AGG | - | chr8_3:55814233-55814252 | Msa1296410:CDS | 10.0% |
!!! | TGTTTTATAAATTACAAATT+AGG | - | chr8_3:55814916-55814935 | Msa1296410:intron | 10.0% |
!!! | GTTTTATAAATTACAAATTA+GGG | - | chr8_3:55814917-55814936 | Msa1296410:intron | 10.0% |
!!! | TTATCATTTTCCAATTATTA+TGG | - | chr8_3:55811554-55811573 | Msa1296410:intron | 15.0% |
!! | AAATAAATGAATAAAAAGGA+TGG | + | chr8_3:55811633-55811652 | None:intergenic | 15.0% |
!! | TTAATTAGATTGTAAAATGT+AGG | - | chr8_3:55811771-55811790 | Msa1296410:intron | 15.0% |
!!! | TAACTTTTAATTTCTAATTG+AGG | - | chr8_3:55814646-55814665 | Msa1296410:CDS | 15.0% |
!! | GTGTAAAAAGTTGTAAAAAA+GGG | + | chr8_3:55810610-55810629 | None:intergenic | 20.0% |
!! | ATGAAAATGTAAATGATGTT+TGG | + | chr8_3:55810801-55810820 | None:intergenic | 20.0% |
!!! | CAATGTCTTTTATATATGAA+AGG | + | chr8_3:55810966-55810985 | None:intergenic | 20.0% |
!! | TGTTAGTACTATACTTATAA+TGG | - | chr8_3:55810995-55811014 | Msa1296410:CDS | 20.0% |
!!! | AACTTTTTTGAATTAGTTGT+TGG | - | chr8_3:55811033-55811052 | Msa1296410:CDS | 20.0% |
!!! | TTTATTTAGTTTTGTTGTGT+TGG | - | chr8_3:55811070-55811089 | Msa1296410:CDS | 20.0% |
!!! | TTTTAGACGTTTTTATGAAA+TGG | - | chr8_3:55811184-55811203 | Msa1296410:CDS | 20.0% |
!!! | TTTAGACGTTTTTATGAAAT+GGG | - | chr8_3:55811185-55811204 | Msa1296410:CDS | 20.0% |
!!! | GTTTTTTTTGTCTTTTTTTG+TGG | - | chr8_3:55811252-55811271 | Msa1296410:intron | 20.0% |
!! | TTACAACATACCATAATAAT+TGG | + | chr8_3:55811567-55811586 | None:intergenic | 20.0% |
!! | TTATATCATGATGATTACAT+TGG | - | chr8_3:55811597-55811616 | Msa1296410:intron | 20.0% |
!!! | GATTCTTTCATTTTTTTCTT+AGG | - | chr8_3:55811734-55811753 | Msa1296410:intron | 20.0% |
!!! | ATGTAGGAAATAATTTTTTG+AGG | - | chr8_3:55811787-55811806 | Msa1296410:intron | 20.0% |
!! | CTACTTGTGATAAAAATAAT+TGG | - | chr8_3:55811812-55811831 | Msa1296410:intron | 20.0% |
!! | AAAATAATTGGTATGTTGTT+TGG | - | chr8_3:55811824-55811843 | Msa1296410:intron | 20.0% |
!!! | TTTACTTATTTTCTTGTCTT+AGG | + | chr8_3:55812065-55812084 | None:intergenic | 20.0% |
!! | AATAAGTAAATAACCACTTA+TGG | - | chr8_3:55812075-55812094 | Msa1296410:intron | 20.0% |
!!! | TAGTTTTAGAGTTCTTTTAA+CGG | - | chr8_3:55812104-55812123 | Msa1296410:intron | 20.0% |
!! | AAAAATGAAGTTGAAATGTT+AGG | - | chr8_3:55812757-55812776 | Msa1296410:CDS | 20.0% |
!! | TATCAAGAAACAATTTGATT+GGG | - | chr8_3:55814043-55814062 | Msa1296410:CDS | 20.0% |
!!! | TTTTCCATAAGATTCTTTTA+AGG | + | chr8_3:55814396-55814415 | None:intergenic | 20.0% |
!! | TGAAACAAATATTTGAAGAT+AGG | + | chr8_3:55814607-55814626 | None:intergenic | 20.0% |
!! | TTCAAACTAATTTGAATAGA+AGG | - | chr8_3:55815122-55815141 | Msa1296410:CDS | 20.0% |
!! | AATAAAAATTGATACCTAGA+TGG | + | chr8_3:55815413-55815432 | None:intergenic | 20.0% |
!! | AATCAGAAGATAACAAAAAT+AGG | + | chr8_3:55815446-55815465 | None:intergenic | 20.0% |
!! | ATAATTCAATTTGACAACAT+TGG | + | chr8_3:55815725-55815744 | None:intergenic | 20.0% |
!!! | TTTCCTGTATTTTTTATTGA+AGG | - | chr8_3:55816400-55816419 | Msa1296410:five_prime_UTR | 20.0% |
!!! | TTCCTGTATTTTTTATTGAA+GGG | - | chr8_3:55816401-55816420 | Msa1296410:five_prime_UTR | 20.0% |
! | TAAAAAGTTGTAAAAAAGGG+TGG | + | chr8_3:55810607-55810626 | None:intergenic | 25.0% |
! | GGTGTAAAAAGTTGTAAAAA+AGG | + | chr8_3:55810611-55810630 | None:intergenic | 25.0% |
! | AAAAATAGAAGGAAAATAGC+AGG | + | chr8_3:55810927-55810946 | None:intergenic | 25.0% |
!!! | TTGATGATTTGTTTTTTCTG+AGG | - | chr8_3:55811323-55811342 | Msa1296410:intron | 25.0% |
! | TTACATTCTTCTTAGCATTA+TGG | - | chr8_3:55811373-55811392 | Msa1296410:intron | 25.0% |
! | TCTAATTAATTCAGCACAAA+GGG | + | chr8_3:55811760-55811779 | None:intergenic | 25.0% |
! | ATCTAATTAATTCAGCACAA+AGG | + | chr8_3:55811761-55811780 | None:intergenic | 25.0% |
!! | ATTAGAAAATAAGCTTGCTT+CGG | - | chr8_3:55811917-55811936 | Msa1296410:intron | 25.0% |
!! | CAATTTTTCTCTTGCAAAAA+TGG | + | chr8_3:55812443-55812462 | None:intergenic | 25.0% |
!!! | TTCATTTTTCATTTTTGCCA+GGG | + | chr8_3:55812746-55812765 | None:intergenic | 25.0% |
!!! | AAAGTATCGATTCTTCTATT+GGG | + | chr8_3:55812868-55812887 | None:intergenic | 25.0% |
! | CATAATGAAGAATCATCTAA+AGG | - | chr8_3:55813021-55813040 | Msa1296410:CDS | 25.0% |
! | ATTCCTGAATTATTTACTGA+GGG | + | chr8_3:55813822-55813841 | None:intergenic | 25.0% |
! | CTATCAAGAAACAATTTGAT+TGG | - | chr8_3:55814042-55814061 | Msa1296410:CDS | 25.0% |
! | CAATCCTTAAAAGAATCTTA+TGG | - | chr8_3:55814389-55814408 | Msa1296410:CDS | 25.0% |
! | TACTATGAGTCATAATAGAA+TGG | + | chr8_3:55814796-55814815 | None:intergenic | 25.0% |
! | AATATTCCAGAGTTTAACAT+AGG | + | chr8_3:55814831-55814850 | None:intergenic | 25.0% |
! | ATTGGAATTAAACATACCTA+CGG | - | chr8_3:55815051-55815070 | Msa1296410:CDS | 25.0% |
! | TCTATAATTTCCAACTTTCA+AGG | - | chr8_3:55815216-55815235 | Msa1296410:intron | 25.0% |
! | ATTCCTAATTGAAATAGTCT+TGG | - | chr8_3:55815258-55815277 | Msa1296410:intron | 25.0% |
! | TTTCACAGTGAAAACAAAAT+GGG | + | chr8_3:55815367-55815386 | None:intergenic | 25.0% |
!! | TTTTCACAGTGAAAACAAAA+TGG | + | chr8_3:55815368-55815387 | None:intergenic | 25.0% |
!! | CATTTAATTAGTTTCCATCT+AGG | - | chr8_3:55815396-55815415 | Msa1296410:intron | 25.0% |
! | TGTCAAATTGAATTATGAGT+TGG | - | chr8_3:55815729-55815748 | Msa1296410:intron | 25.0% |
! | TGCAATAACATTGTCAAAAA+GGG | + | chr8_3:55815911-55815930 | None:intergenic | 25.0% |
!!! | TTTGTTTTCATAACTTTCAG+GGG | + | chr8_3:55816000-55816019 | None:intergenic | 25.0% |
!!! | CTTTGTTTTCATAACTTTCA+GGG | + | chr8_3:55816001-55816020 | None:intergenic | 25.0% |
!!! | TCTTTGTTTTCATAACTTTC+AGG | + | chr8_3:55816002-55816021 | None:intergenic | 25.0% |
TCTAAAGAGATATGAGATTG+AGG | + | chr8_3:55810896-55810915 | None:intergenic | 30.0% | |
TCAATCTCATATCTCTTTAG+AGG | - | chr8_3:55810895-55810914 | Msa1296410:CDS | 30.0% | |
!! | ATTTTCTTTTGAAGGGAGAT+TGG | + | chr8_3:55811462-55811481 | None:intergenic | 30.0% |
AATCTCCCTTCAAAAGAAAA+TGG | - | chr8_3:55811461-55811480 | Msa1296410:intron | 30.0% | |
TCTTGCTGATAAAGAAGAAT+TGG | - | chr8_3:55811878-55811897 | Msa1296410:intron | 30.0% | |
GTGTTAAAATCTTGCTTTGA+AGG | - | chr8_3:55812130-55812149 | Msa1296410:intron | 30.0% | |
!! | AAAATCTTGCTTTGAAGGTT+TGG | - | chr8_3:55812135-55812154 | Msa1296410:intron | 30.0% |
! | AGAATTTGAAAAAGAGTGCA+TGG | - | chr8_3:55812342-55812361 | Msa1296410:intron | 30.0% |
TGCAAGAGAAAAATTGATTG+AGG | - | chr8_3:55812447-55812466 | Msa1296410:CDS | 30.0% | |
!! | AGAAGCATTATCTTTCTCAA+TGG | + | chr8_3:55812536-55812555 | None:intergenic | 30.0% |
CAAATTCTCTCTCTTCATTT+CGG | + | chr8_3:55812600-55812619 | None:intergenic | 30.0% | |
!! | CTTCATTTTTCATTTTTGCC+AGG | + | chr8_3:55812747-55812766 | None:intergenic | 30.0% |
! | CTTGTTCCTTCTTATTTCAA+GGG | + | chr8_3:55812791-55812810 | None:intergenic | 30.0% |
! | ACTTGTTCCTTCTTATTTCA+AGG | + | chr8_3:55812792-55812811 | None:intergenic | 30.0% |
GTTAAACTCAACTAGTTCAA+TGG | - | chr8_3:55812810-55812829 | Msa1296410:CDS | 30.0% | |
!! | CAAAGTATCGATTCTTCTAT+TGG | + | chr8_3:55812869-55812888 | None:intergenic | 30.0% |
! | CTCATTCATTTTCCTACTTA+GGG | + | chr8_3:55812941-55812960 | None:intergenic | 30.0% |
! | AAAGCATTACTCTTGAGAAT+TGG | + | chr8_3:55812966-55812985 | None:intergenic | 30.0% |
!! | TTCTGCATTGATTTCAGATT+CGG | - | chr8_3:55813149-55813168 | Msa1296410:CDS | 30.0% |
TGAAATGGAAAAATTAGCAG+TGG | - | chr8_3:55813257-55813276 | Msa1296410:CDS | 30.0% | |
!! | AAAGAAGTTGATGAGATCAA+TGG | - | chr8_3:55813321-55813340 | Msa1296410:CDS | 30.0% |
! | GTTATCCTTTAGTTCATCAA+GGG | + | chr8_3:55813424-55813443 | None:intergenic | 30.0% |
! | TGTTATCCTTTAGTTCATCA+AGG | + | chr8_3:55813425-55813444 | None:intergenic | 30.0% |
ATATTCTCGAGTATATCATC+AGG | + | chr8_3:55813513-55813532 | None:intergenic | 30.0% | |
! | AGAATATTAGAGTAGCTTTG+AGG | - | chr8_3:55813526-55813545 | Msa1296410:CDS | 30.0% |
TGATCCTTCAAATAACTCTT+TGG | - | chr8_3:55813614-55813633 | Msa1296410:CDS | 30.0% | |
GTAATATTTACATCACTGGA+TGG | + | chr8_3:55813648-55813667 | None:intergenic | 30.0% | |
GTCAGTAATATTTACATCAC+TGG | + | chr8_3:55813652-55813671 | None:intergenic | 30.0% | |
! | TGCTGTTTGTTTCTCTTTAT+TGG | + | chr8_3:55813681-55813700 | None:intergenic | 30.0% |
CATTCCTGAATTATTTACTG+AGG | + | chr8_3:55813823-55813842 | None:intergenic | 30.0% | |
AAATAATTCAGGAATGCCAA+CGG | - | chr8_3:55813827-55813846 | Msa1296410:CDS | 30.0% | |
! | ATGTTTTCCATTGGAAAACA+CGG | + | chr8_3:55813863-55813882 | None:intergenic | 30.0% |
GTGTGTTATGATTTACTGAA+TGG | - | chr8_3:55813918-55813937 | Msa1296410:CDS | 30.0% | |
TTATGATTTACTGAATGGCA+AGG | - | chr8_3:55813923-55813942 | Msa1296410:CDS | 30.0% | |
! | TTCAAATGGTCATGATTTTC+AGG | - | chr8_3:55814178-55814197 | Msa1296410:CDS | 30.0% |
! | TCAAATGGTCATGATTTTCA+GGG | - | chr8_3:55814179-55814198 | Msa1296410:CDS | 30.0% |
TGAATCTCAAAAGGAAACAT+TGG | - | chr8_3:55814271-55814290 | Msa1296410:CDS | 30.0% | |
AGAATCTTATGGAAAACTTG+AGG | - | chr8_3:55814400-55814419 | Msa1296410:CDS | 30.0% | |
TGAAATCAGATCTTGATTCA+CGG | - | chr8_3:55814447-55814466 | Msa1296410:CDS | 30.0% | |
!! | TGTCTTTCTGGTTAATATCA+TGG | + | chr8_3:55814723-55814742 | None:intergenic | 30.0% |
TTCAATGCTTACTCCAAATT+GGG | + | chr8_3:55814945-55814964 | None:intergenic | 30.0% | |
!! | TCTCTGAAACATACAATGTA+CGG | - | chr8_3:55814985-55815004 | Msa1296410:intron | 30.0% |
TTGGAATTAAACATACCTAC+GGG | - | chr8_3:55815052-55815071 | Msa1296410:CDS | 30.0% | |
GAGATATGTTAATGCTTTGT+TGG | - | chr8_3:55815164-55815183 | Msa1296410:intron | 30.0% | |
! | ATATGTTAATGCTTTGTTGG+TGG | - | chr8_3:55815167-55815186 | Msa1296410:intron | 30.0% |
! | TATGTTAATGCTTTGTTGGT+GGG | - | chr8_3:55815168-55815187 | Msa1296410:intron | 30.0% |
! | GTTTTTGTTACCTTGAAAGT+TGG | + | chr8_3:55815229-55815248 | None:intergenic | 30.0% |
TCAAGGTAACAAAAACTTAC+AGG | - | chr8_3:55815233-55815252 | Msa1296410:intron | 30.0% | |
TATCTAACAGTTTCTTGTCT+CGG | + | chr8_3:55815493-55815512 | None:intergenic | 30.0% | |
AAACATCAAACCTGAATTAG+GGG | + | chr8_3:55815613-55815632 | None:intergenic | 30.0% | |
CAAACATCAAACCTGAATTA+GGG | + | chr8_3:55815614-55815633 | None:intergenic | 30.0% | |
! | TTTCTAGTCAATCATACACA+TGG | + | chr8_3:55815684-55815703 | None:intergenic | 30.0% |
!!! | TATGAGTTGGTTTTTCATGT+TGG | - | chr8_3:55815742-55815761 | Msa1296410:intron | 30.0% |
AAGAAACCATCCTTAATCTT+GGG | - | chr8_3:55815848-55815867 | Msa1296410:intron | 30.0% | |
CTGCAATAACATTGTCAAAA+AGG | + | chr8_3:55815912-55815931 | None:intergenic | 30.0% | |
TGAAGATGATACTAAATCCA+AGG | - | chr8_3:55816050-55816069 | Msa1296410:intron | 30.0% | |
AAAGATAAAATCTTCTCCAG+AGG | + | chr8_3:55816132-55816151 | None:intergenic | 30.0% | |
! | CATTGTAACTTCTAAGAAAC+CGG | - | chr8_3:55816200-55816219 | Msa1296410:five_prime_UTR | 30.0% |
GTTTGTGGAAGAAGTTATTA+TGG | - | chr8_3:55816256-55816275 | Msa1296410:five_prime_UTR | 30.0% | |
AATACGTACTTACTGAAGAA+AGG | - | chr8_3:55816365-55816384 | Msa1296410:five_prime_UTR | 30.0% | |
GTCCCTTCAATAAAAAATAC+AGG | + | chr8_3:55816406-55816425 | None:intergenic | 30.0% | |
AGGGAAAGAAGTGAAAAGAT+GGG | + | chr8_3:55810699-55810718 | None:intergenic | 35.0% | |
AAGGGAAAGAAGTGAAAAGA+TGG | + | chr8_3:55810700-55810719 | None:intergenic | 35.0% | |
! | CCTCTCCATTTTCTTTTGAA+GGG | + | chr8_3:55811469-55811488 | None:intergenic | 35.0% |
! | ACCTCTCCATTTTCTTTTGA+AGG | + | chr8_3:55811470-55811489 | None:intergenic | 35.0% |
TAAAATTGCACAAGAAGCAG+TGG | - | chr8_3:55811986-55812005 | Msa1296410:intron | 35.0% | |
!! | AGCAAAAGTTGAAGTGTTGT+CGG | - | chr8_3:55812162-55812181 | Msa1296410:intron | 35.0% |
! | GATTTGTTCGAGAAGAACAA+GGG | - | chr8_3:55812284-55812303 | Msa1296410:CDS | 35.0% |
! | TTGAAAAAGAGTGCATGGTT+TGG | - | chr8_3:55812347-55812366 | Msa1296410:intron | 35.0% |
! | TGAAAAAGAGTGCATGGTTT+GGG | - | chr8_3:55812348-55812367 | Msa1296410:intron | 35.0% |
AGTTATCCGTGACAAGTAAA+AGG | - | chr8_3:55812377-55812396 | Msa1296410:intron | 35.0% | |
! | AAAACAATTGACTCAAGCTG+AGG | - | chr8_3:55812477-55812496 | Msa1296410:CDS | 35.0% |
TAATGCTTCTCTGACATATG+AGG | - | chr8_3:55812546-55812565 | Msa1296410:CDS | 35.0% | |
CGAAATGAAGAGAGAGAATT+TGG | - | chr8_3:55812598-55812617 | Msa1296410:CDS | 35.0% | |
GAGATTCCCTTGAAATAAGA+AGG | - | chr8_3:55812782-55812801 | Msa1296410:CDS | 35.0% | |
!!! | CGCTTTGTTTTCTTCTTCAA+CGG | + | chr8_3:55812908-55812927 | None:intergenic | 35.0% |
CGTTAAAAGATTCCCTAAGT+AGG | - | chr8_3:55812926-55812945 | Msa1296410:CDS | 35.0% | |
! | GCTCATTCATTTTCCTACTT+AGG | + | chr8_3:55812942-55812961 | None:intergenic | 35.0% |
TAACCTTTGTGAGTTCTCTT+TGG | - | chr8_3:55813071-55813090 | Msa1296410:CDS | 35.0% | |
TTGGCATCAATGTCTGATAT+TGG | - | chr8_3:55813090-55813109 | Msa1296410:CDS | 35.0% | |
CTTCAGAAGTGGAAAACAAA+AGG | - | chr8_3:55813176-55813195 | Msa1296410:CDS | 35.0% | |
GTGGAAAACAAAAGGAATCA+TGG | - | chr8_3:55813184-55813203 | Msa1296410:CDS | 35.0% | |
AGCTTCAGACATAAATCTCA+TGG | - | chr8_3:55813224-55813243 | Msa1296410:CDS | 35.0% | |
CATGGATGACTTTGTTGAAA+TGG | - | chr8_3:55813242-55813261 | Msa1296410:CDS | 35.0% | |
ATCTTCCCTTGATGAACTAA+AGG | - | chr8_3:55813416-55813435 | Msa1296410:CDS | 35.0% | |
TAAAGGATAACATTCCCAGT+TGG | - | chr8_3:55813433-55813452 | Msa1296410:CDS | 35.0% | |
GGATGTAGTAAAAATGATCC+TGG | - | chr8_3:55813461-55813480 | Msa1296410:CDS | 35.0% | |
AATATGACCAGAGACTTTGT+CGG | + | chr8_3:55813586-55813605 | None:intergenic | 35.0% | |
AAAGTCTCTGGTCATATTGA+AGG | - | chr8_3:55813588-55813607 | Msa1296410:CDS | 35.0% | |
TCCTTCAAATAACTCTTTGG+TGG | - | chr8_3:55813617-55813636 | Msa1296410:CDS | 35.0% | |
ACCACCAAAGAGTTATTTGA+AGG | + | chr8_3:55813621-55813640 | None:intergenic | 35.0% | |
TGTTTCTCTTTATTGGTGAG+AGG | + | chr8_3:55813674-55813693 | None:intergenic | 35.0% | |
GTACCCTCAGTAAATAATTC+AGG | - | chr8_3:55813816-55813835 | Msa1296410:CDS | 35.0% | |
AATAATTCAGGAATGCCAAC+GGG | - | chr8_3:55813828-55813847 | Msa1296410:CDS | 35.0% | |
! | TGAGTTCAGATGTTTTCCAT+TGG | + | chr8_3:55813872-55813891 | None:intergenic | 35.0% |
TGAAGAACTAACAACAGCTT+TGG | - | chr8_3:55813965-55813984 | Msa1296410:CDS | 35.0% | |
!! | AACTAACAACAGCTTTGGAT+TGG | - | chr8_3:55813970-55813989 | Msa1296410:CDS | 35.0% |
!! | GAATCACTGTTTTTCACTTC+AGG | - | chr8_3:55813998-55814017 | Msa1296410:CDS | 35.0% |
TCAGGATGTTTCTTGTATGA+AGG | - | chr8_3:55814016-55814035 | Msa1296410:CDS | 35.0% | |
AAAACATGGAAACTGTTCTG+CGG | + | chr8_3:55814144-55814163 | None:intergenic | 35.0% | |
GTAGTTACTTGAGGAAAACA+TGG | + | chr8_3:55814158-55814177 | None:intergenic | 35.0% | |
! | CCATTTGAAGTAGTTACTTG+AGG | + | chr8_3:55814167-55814186 | None:intergenic | 35.0% |
CCTCAAGTAACTACTTCAAA+TGG | - | chr8_3:55814164-55814183 | Msa1296410:CDS | 35.0% | |
TCAAGAGATGTATTCTGATG+AGG | - | chr8_3:55814208-55814227 | Msa1296410:CDS | 35.0% | |
GATCAATGCTGAATCTCAAA+AGG | - | chr8_3:55814262-55814281 | Msa1296410:CDS | 35.0% | |
TCTCAAAAGGAAACATTGGA+AGG | - | chr8_3:55814275-55814294 | Msa1296410:CDS | 35.0% | |
CTCAAAAGGAAACATTGGAA+GGG | - | chr8_3:55814276-55814295 | Msa1296410:CDS | 35.0% | |
TGATAGGATTGAGTCCTTAA+CGG | - | chr8_3:55814316-55814335 | Msa1296410:CDS | 35.0% | |
! | TTCCAAAAGTTGATCCGTTA+AGG | + | chr8_3:55814333-55814352 | None:intergenic | 35.0% |
ATCTTGATTCACGGCATAAA+GGG | - | chr8_3:55814456-55814475 | Msa1296410:CDS | 35.0% | |
!!! | CAAGGTTTTGGAATTAGAAG+TGG | - | chr8_3:55814502-55814521 | Msa1296410:CDS | 35.0% |
TCTCTAATTCTTCACAACTG+TGG | + | chr8_3:55814544-55814563 | None:intergenic | 35.0% | |
GATAAACTTACAGTTCGCAA+TGG | + | chr8_3:55814748-55814767 | None:intergenic | 35.0% | |
TAGAATGGTCATCGAGAAAA+AGG | + | chr8_3:55814781-55814800 | None:intergenic | 35.0% | |
CTAGTTCCTATGTTAAACTC+TGG | - | chr8_3:55814822-55814841 | Msa1296410:CDS | 35.0% | |
ACAAATTAGGGATCCCAATT+TGG | - | chr8_3:55814929-55814948 | Msa1296410:intron | 35.0% | |
GTTCAATGCTTACTCCAAAT+TGG | + | chr8_3:55814946-55814965 | None:intergenic | 35.0% | |
AATTCCAATCATCTACCAGA+AGG | + | chr8_3:55815040-55815059 | None:intergenic | 35.0% | |
ATCTAACAGTTTCTTGTCTC+GGG | + | chr8_3:55815492-55815511 | None:intergenic | 35.0% | |
GACTGATATGGTTTAGAAAG+TGG | - | chr8_3:55815566-55815585 | Msa1296410:CDS | 35.0% | |
CCAAACATCAAACCTGAATT+AGG | + | chr8_3:55815615-55815634 | None:intergenic | 35.0% | |
! | CCTAATTCAGGTTTGATGTT+TGG | - | chr8_3:55815612-55815631 | Msa1296410:CDS | 35.0% |
AGATTGGCAATTGACAAGTT+AGG | - | chr8_3:55815635-55815654 | Msa1296410:exon | 35.0% | |
GATTGGCAATTGACAAGTTA+GGG | - | chr8_3:55815636-55815655 | Msa1296410:exon | 35.0% | |
TCATACACATGGAGATAAGT+AGG | + | chr8_3:55815673-55815692 | None:intergenic | 35.0% | |
TGCTAAATCCTAAATCCTAC+AGG | - | chr8_3:55815783-55815802 | Msa1296410:intron | 35.0% | |
CAAGAAACCATCCTTAATCT+TGG | - | chr8_3:55815847-55815866 | Msa1296410:intron | 35.0% | |
!! | ATTCGTTTTTGTTGTCGTGA+TGG | + | chr8_3:55815965-55815984 | None:intergenic | 35.0% |
! | CAGTGTTACTGCTAATGATT+TGG | - | chr8_3:55816176-55816195 | Msa1296410:five_prime_UTR | 35.0% |
CGGTTTCTTAGAAGTTACAA+TGG | + | chr8_3:55816202-55816221 | None:intergenic | 35.0% | |
CATTGTACCTACTAAGAAAC+CGG | - | chr8_3:55816224-55816243 | Msa1296410:five_prime_UTR | 35.0% | |
ATTGTACCTACTAAGAAACC+GGG | - | chr8_3:55816225-55816244 | Msa1296410:five_prime_UTR | 35.0% | |
! | CTTTCAAGTGTTCAATGGAA+GGG | + | chr8_3:55816313-55816332 | None:intergenic | 35.0% |
! | ACTTTCAAGTGTTCAATGGA+AGG | + | chr8_3:55816314-55816333 | None:intergenic | 35.0% |
! | TTTTATTGAAGGGACTTGTC+TGG | - | chr8_3:55816411-55816430 | Msa1296410:five_prime_UTR | 35.0% |
!!! | TGTCGGCTTGGTTGTTTTAT+TGG | + | chr8_3:55810574-55810593 | None:intergenic | 40.0% |
TGGGAGTCAAGAGAAAATGA+CGG | + | chr8_3:55810665-55810684 | None:intergenic | 40.0% | |
AAGATGGGAAAGTGAAGAGT+GGG | + | chr8_3:55810684-55810703 | None:intergenic | 40.0% | |
AAAGATGGGAAAGTGAAGAG+TGG | + | chr8_3:55810685-55810704 | None:intergenic | 40.0% | |
TTGGTGAGAGAAAGGGAAAA+GGG | + | chr8_3:55810718-55810737 | None:intergenic | 40.0% | |
TTTGGTGAGAGAAAGGGAAA+AGG | + | chr8_3:55810719-55810738 | None:intergenic | 40.0% | |
! | TGTGTGTTTGGTGAGAGAAA+GGG | + | chr8_3:55810725-55810744 | None:intergenic | 40.0% |
CCTGGTTCACACTAAAATGA+TGG | + | chr8_3:55811118-55811137 | None:intergenic | 40.0% | |
!! | CCATCATTTTAGTGTGAACC+AGG | - | chr8_3:55811115-55811134 | Msa1296410:CDS | 40.0% |
! | GTATCCTCTGTAGTTCTACT+CGG | - | chr8_3:55811137-55811156 | Msa1296410:CDS | 40.0% |
GCATTATGGATCAAAAACCG+TGG | - | chr8_3:55811387-55811406 | Msa1296410:intron | 40.0% | |
!! | TCTGATGACTTTTTCCTCCA+AGG | + | chr8_3:55811413-55811432 | None:intergenic | 40.0% |
CCCTTCAAAAGAAAATGGAG+AGG | - | chr8_3:55811466-55811485 | Msa1296410:intron | 40.0% | |
!! | GGTTTGATTTTCCGCGTTTT+AGG | - | chr8_3:55811845-55811864 | Msa1296410:intron | 40.0% |
! | GTGTAATTCTAAAGACGAGC+TGG | - | chr8_3:55811950-55811969 | Msa1296410:intron | 40.0% |
AAAACTACTGCAGCCATAAG+TGG | + | chr8_3:55812091-55812110 | None:intergenic | 40.0% | |
TGAAGAAAGAGTAGCCCATT+TGG | - | chr8_3:55812228-55812247 | Msa1296410:intron | 40.0% | |
! | CGATTTGTTCGAGAAGAACA+AGG | - | chr8_3:55812283-55812302 | Msa1296410:CDS | 40.0% |
GATTCATGATGCTGTGATGA+AGG | - | chr8_3:55812312-55812331 | Msa1296410:CDS | 40.0% | |
AAGAGAGAGAATTTGGTCGT+CGG | - | chr8_3:55812605-55812624 | Msa1296410:CDS | 40.0% | |
CTGACACTCTGATTCTAACT+TGG | + | chr8_3:55812680-55812699 | None:intergenic | 40.0% | |
! | ATCTAAAGGTCAAGTTGCTG+TGG | - | chr8_3:55813035-55813054 | Msa1296410:CDS | 40.0% |
ATGCCAAAGAGAACTCACAA+AGG | + | chr8_3:55813077-55813096 | None:intergenic | 40.0% | |
TGATATTGGCAGTGATGACA+AGG | - | chr8_3:55813104-55813123 | Msa1296410:CDS | 40.0% | |
GAGAAAGACACTGAAATCTC+TGG | - | chr8_3:55813288-55813307 | Msa1296410:CDS | 40.0% | |
TCAATGGCTTCTCAGAAACT+AGG | - | chr8_3:55813337-55813356 | Msa1296410:CDS | 40.0% | |
AGAAGTCCGAAATGTGATCA+GGG | + | chr8_3:55813377-55813396 | None:intergenic | 40.0% | |
! | CAGGATTTTTGTGAGTGACA+TGG | + | chr8_3:55813494-55813513 | None:intergenic | 40.0% |
GAAGACCTGAGTAAGTCAAT+AGG | - | chr8_3:55813708-55813727 | Msa1296410:CDS | 40.0% | |
!! | CCTTTCCTATTGACTTACTC+AGG | + | chr8_3:55813716-55813735 | None:intergenic | 40.0% |
CCTGAGTAAGTCAATAGGAA+AGG | - | chr8_3:55813713-55813732 | Msa1296410:CDS | 40.0% | |
GAATTATCACAATCCACAGC+AGG | + | chr8_3:55813768-55813787 | None:intergenic | 40.0% | |
!! | GGATGATAGGTCATTTTGCA+GGG | - | chr8_3:55814099-55814118 | Msa1296410:CDS | 40.0% |
!! | GATGATAGGTCATTTTGCAG+GGG | - | chr8_3:55814100-55814119 | Msa1296410:CDS | 40.0% |
AAACATGGAAACTGTTCTGC+GGG | + | chr8_3:55814143-55814162 | None:intergenic | 40.0% | |
AGCTTCAATCAGCTACTGAT+AGG | - | chr8_3:55814300-55814319 | Msa1296410:CDS | 40.0% | |
!! | GTCCTTAACGGATCAACTTT+TGG | - | chr8_3:55814328-55814347 | Msa1296410:CDS | 40.0% |
GATCTTGATTCACGGCATAA+AGG | - | chr8_3:55814455-55814474 | Msa1296410:CDS | 40.0% | |
TCTTGATTCACGGCATAAAG+GGG | - | chr8_3:55814457-55814476 | Msa1296410:CDS | 40.0% | |
TAAAGGGGCGGAATTAAAAG+AGG | - | chr8_3:55814472-55814491 | Msa1296410:CDS | 40.0% | |
ATTAAAAGAGGTCGGTCTCA+AGG | - | chr8_3:55814484-55814503 | Msa1296410:CDS | 40.0% | |
GAGTTGCAATTCAACACATC+TGG | + | chr8_3:55814567-55814586 | None:intergenic | 40.0% | |
AATTGCAACTCCAGCTTGAA+AGG | - | chr8_3:55814576-55814595 | Msa1296410:CDS | 40.0% | |
ATAGGTCTTACCTTTCAAGC+TGG | + | chr8_3:55814589-55814608 | None:intergenic | 40.0% | |
GGCATGCTGAGAACATTAAT+TGG | + | chr8_3:55814685-55814704 | None:intergenic | 40.0% | |
TAATGTTCTCAGCATGCCAA+AGG | - | chr8_3:55814687-55814706 | Msa1296410:CDS | 40.0% | |
TACCAGAAGGAACCAAATCA+TGG | + | chr8_3:55815027-55815046 | None:intergenic | 40.0% | |
CACATGATATCGAAGAACCA+AGG | + | chr8_3:55815084-55815103 | None:intergenic | 40.0% | |
GCGCCAAGACTATTTCAATT+AGG | + | chr8_3:55815264-55815283 | None:intergenic | 40.0% | |
CAGTGAGAGTCATATTACAG+TGG | + | chr8_3:55815297-55815316 | None:intergenic | 40.0% | |
!! | TTAATTCTGAAGCTGCCTCT+AGG | + | chr8_3:55815338-55815357 | None:intergenic | 40.0% |
TCTTGTCTCGGGAATATTAG+AGG | + | chr8_3:55815481-55815500 | None:intergenic | 40.0% | |
CAGGTTTGATGTTTGGAGAT+TGG | - | chr8_3:55815619-55815638 | Msa1296410:CDS | 40.0% | |
ATCCTAAATCCTACAGGACT+TGG | - | chr8_3:55815789-55815808 | Msa1296410:intron | 40.0% | |
! | GTCACTTACTTTGGAAACCT+TGG | + | chr8_3:55816070-55816089 | None:intergenic | 40.0% |
TTGTATAATGCCTGGAATGG+TGG | + | chr8_3:55816109-55816128 | None:intergenic | 40.0% | |
AGGTTGTATAATGCCTGGAA+TGG | + | chr8_3:55816112-55816131 | None:intergenic | 40.0% | |
TTAGCAGTAACACTGTCATC+TGG | + | chr8_3:55816171-55816190 | None:intergenic | 40.0% | |
TTCTTAGTAGGTACAATGGC+CGG | + | chr8_3:55816222-55816241 | None:intergenic | 40.0% | |
CGGTTTCTTAGTAGGTACAA+TGG | + | chr8_3:55816226-55816245 | None:intergenic | 40.0% | |
! | TGGAAGGGATGTTTTCATGT+TGG | + | chr8_3:55816298-55816317 | None:intergenic | 40.0% |
! | TGCGACTTTCAAGTGTTCAA+TGG | + | chr8_3:55816318-55816337 | None:intergenic | 40.0% |
AGGGTGGTGATAGTAAGTGT+CGG | + | chr8_3:55810591-55810610 | None:intergenic | 45.0% | |
! | TTGTTGGTGAGAACAGAGAG+AGG | + | chr8_3:55810632-55810651 | None:intergenic | 45.0% |
! | GTGTGTGTTTGGTGAGAGAA+AGG | + | chr8_3:55810726-55810745 | None:intergenic | 45.0% |
! | CAACAGAGAGAGTGTGTGTT+TGG | + | chr8_3:55810737-55810756 | None:intergenic | 45.0% |
GTAGAACTACAGAGGATACC+TGG | + | chr8_3:55811136-55811155 | None:intergenic | 45.0% | |
AAGCACGTGTACCTAAAACG+CGG | + | chr8_3:55811859-55811878 | None:intergenic | 45.0% | |
AAGGTCTGGATGAAGCTTTG+CGG | - | chr8_3:55812191-55812210 | Msa1296410:intron | 45.0% | |
GAAAGAGTAGCCCATTTGGA+TGG | - | chr8_3:55812232-55812251 | Msa1296410:intron | 45.0% | |
CTTCAGAGCTCCATCCAAAT+GGG | + | chr8_3:55812245-55812264 | None:intergenic | 45.0% | |
TTCGAGAAGAACAAGGGCAA+AGG | - | chr8_3:55812290-55812309 | Msa1296410:CDS | 45.0% | |
! | AAAAGAGTGCATGGTTTGGG+AGG | - | chr8_3:55812351-55812370 | Msa1296410:intron | 45.0% |
ATCCGTGACAAGTAAAAGGC+TGG | - | chr8_3:55812381-55812400 | Msa1296410:intron | 45.0% | |
! | TGCCAGCCTTTTACTTGTCA+CGG | + | chr8_3:55812386-55812405 | None:intergenic | 45.0% |
!! | CCAACTCCTTTTCAAGCACT+CGG | + | chr8_3:55812573-55812592 | None:intergenic | 45.0% |
!! | TTCATTTTTGCCAGGGAACC+AGG | + | chr8_3:55812739-55812758 | None:intergenic | 45.0% |
TCTTCACTTGACAGTTCTCC+TGG | - | chr8_3:55812838-55812857 | Msa1296410:CDS | 45.0% | |
CTTCACTTGACAGTTCTCCT+GGG | - | chr8_3:55812839-55812858 | Msa1296410:CDS | 45.0% | |
ATTCTTCTATTGGGAGTCCC+AGG | + | chr8_3:55812859-55812878 | None:intergenic | 45.0% | |
TGAAATCAATGCAGAAGCCG+AGG | + | chr8_3:55813145-55813164 | None:intergenic | 45.0% | |
GACTACCCCTGATCACATTT+CGG | - | chr8_3:55813368-55813387 | Msa1296410:CDS | 45.0% | |
GAAGTCCGAAATGTGATCAG+GGG | + | chr8_3:55813376-55813395 | None:intergenic | 45.0% | |
GAGAAGTCCGAAATGTGATC+AGG | + | chr8_3:55813378-55813397 | None:intergenic | 45.0% | |
! | TAACATTCCCAGTTGGCTTC+AGG | - | chr8_3:55813440-55813459 | Msa1296410:CDS | 45.0% |
ACTACATCCTGAAGCCAACT+GGG | + | chr8_3:55813450-55813469 | None:intergenic | 45.0% | |
TACTACATCCTGAAGCCAAC+TGG | + | chr8_3:55813451-55813470 | None:intergenic | 45.0% | |
!!! | GAGTGACATGGTTTTGTTCC+AGG | + | chr8_3:55813482-55813501 | None:intergenic | 45.0% |
AATCTAGATCCGTGCGTCTT+TGG | - | chr8_3:55813558-55813577 | Msa1296410:CDS | 45.0% | |
! | TTTGGTTCCGACAAAGTCTC+TGG | - | chr8_3:55813576-55813595 | Msa1296410:CDS | 45.0% |
AAGAATCAACTTGCCTGCTG+TGG | - | chr8_3:55813752-55813771 | Msa1296410:CDS | 45.0% | |
GTCTCATCACTTGTGCACAA+GGG | + | chr8_3:55813795-55813814 | None:intergenic | 45.0% | |
AGTCTCATCACTTGTGCACA+AGG | + | chr8_3:55813796-55813815 | None:intergenic | 45.0% | |
! | ACATGGTCCGTGTTTTCCAA+TGG | - | chr8_3:55813853-55813872 | Msa1296410:CDS | 45.0% |
AGCGAAAGTGAAGCAGAGTT+TGG | - | chr8_3:55814077-55814096 | Msa1296410:CDS | 45.0% | |
GCGAAAGTGAAGCAGAGTTT+GGG | - | chr8_3:55814078-55814097 | Msa1296410:CDS | 45.0% | |
! | GAAGCAGAGTTTGGGATGAT+AGG | - | chr8_3:55814086-55814105 | Msa1296410:CDS | 45.0% |
!! | GGGATGATAGGTCATTTTGC+AGG | - | chr8_3:55814098-55814117 | Msa1296410:CDS | 45.0% |
! | TTCGCAATGGCTTGTCTTTC+TGG | + | chr8_3:55814735-55814754 | None:intergenic | 45.0% |
GATATTGCCGCACCATGATT+TGG | - | chr8_3:55815012-55815031 | Msa1296410:intron | 45.0% | |
GAAGGAACCAAATCATGGTG+CGG | + | chr8_3:55815022-55815041 | None:intergenic | 45.0% | |
!! | CACCATGATTTGGTTCCTTC+TGG | - | chr8_3:55815022-55815041 | Msa1296410:intron | 45.0% |
GGTTCCTTCTGGTAGATGAT+TGG | - | chr8_3:55815033-55815052 | Msa1296410:CDS | 45.0% | |
! | GAAATAGTCTTGGCGCAAGT+TGG | - | chr8_3:55815268-55815287 | Msa1296410:intron | 45.0% |
GTCTACATAGAAGCTCCTAG+AGG | - | chr8_3:55815320-55815339 | Msa1296410:intron | 45.0% | |
GAAATCGAAGCCCCTAATTC+AGG | - | chr8_3:55815600-55815619 | Msa1296410:CDS | 45.0% | |
CTCCAAGTCCTGTAGGATTT+AGG | + | chr8_3:55815794-55815813 | None:intergenic | 45.0% | |
CTGTTATCTCCAAGTCCTGT+AGG | + | chr8_3:55815801-55815820 | None:intergenic | 45.0% | |
AACAGCCGCTTCAGAAAAGT+TGG | - | chr8_3:55815816-55815835 | Msa1296410:intron | 45.0% | |
!! | CTCTGCCAACTTTTCTGAAG+CGG | + | chr8_3:55815824-55815843 | None:intergenic | 45.0% |
CTGCTTCCCAAGATTAAGGA+TGG | + | chr8_3:55815857-55815876 | None:intergenic | 45.0% | |
TCAGCTGCTTCCCAAGATTA+AGG | + | chr8_3:55815861-55815880 | None:intergenic | 45.0% | |
TTAATCTTGGGAAGCAGCTG+AGG | - | chr8_3:55815860-55815879 | Msa1296410:intron | 45.0% | |
TCAAAAAGGGCTGCATCCTT+TGG | + | chr8_3:55815898-55815917 | None:intergenic | 45.0% | |
!!! | TTTTGTTGTCGTGATGGTGG+TGG | + | chr8_3:55815959-55815978 | None:intergenic | 45.0% |
!! | CGTTTTTGTTGTCGTGATGG+TGG | + | chr8_3:55815962-55815981 | None:intergenic | 45.0% |
TCATAACTTTCAGGGGAGCA+GGG | + | chr8_3:55815993-55816012 | None:intergenic | 45.0% | |
TTCATAACTTTCAGGGGAGC+AGG | + | chr8_3:55815994-55816013 | None:intergenic | 45.0% | |
TCCAGGCATTATACAACCTC+TGG | - | chr8_3:55816113-55816132 | Msa1296410:intron | 45.0% | |
TCCAGAGGTTGTATAATGCC+TGG | + | chr8_3:55816117-55816136 | None:intergenic | 45.0% | |
!! | GGTGATAGTAAGTGTCGGCT+TGG | + | chr8_3:55810586-55810605 | None:intergenic | 50.0% |
TGACGGAGTGAGTGTGTTGT+TGG | + | chr8_3:55810648-55810667 | None:intergenic | 50.0% | |
TGGATCAAAAACCGTGGCCT+TGG | - | chr8_3:55811393-55811412 | Msa1296410:intron | 50.0% | |
! | ATCAAAAACCGTGGCCTTGG+AGG | - | chr8_3:55811396-55811415 | Msa1296410:intron | 50.0% |
!! | GACTTTTTCCTCCAAGGCCA+CGG | + | chr8_3:55811407-55811426 | None:intergenic | 50.0% |
ATTGCACAAGAAGCAGTGGC+AGG | - | chr8_3:55811990-55812009 | Msa1296410:intron | 50.0% | |
!! | GAAGTGTTGTCGGTGAAGCA+AGG | - | chr8_3:55812172-55812191 | Msa1296410:intron | 50.0% |
AGGTCTGGATGAAGCTTTGC+GGG | - | chr8_3:55812192-55812211 | Msa1296410:intron | 50.0% | |
TGAAGCTTTGCGGGACAGAT+TGG | - | chr8_3:55812201-55812220 | Msa1296410:intron | 50.0% | |
CCTTCAGAGCTCCATCCAAA+TGG | + | chr8_3:55812246-55812265 | None:intergenic | 50.0% | |
! | CCATTTGGATGGAGCTCTGA+AGG | - | chr8_3:55812243-55812262 | Msa1296410:intron | 50.0% |
TGAGGTCCGAGTGCTTGAAA+AGG | - | chr8_3:55812564-55812583 | Msa1296410:CDS | 50.0% | |
CCGAGTGCTTGAAAAGGAGT+TGG | - | chr8_3:55812570-55812589 | Msa1296410:CDS | 50.0% | |
! | AGAGATTGCGCCTTCTGGTT+CGG | - | chr8_3:55812698-55812717 | Msa1296410:CDS | 50.0% |
GTAACCGTTTCCGAACCAGA+AGG | + | chr8_3:55812711-55812730 | None:intergenic | 50.0% | |
! | GATTCGGAGCACTTCAGAAG+TGG | - | chr8_3:55813165-55813184 | Msa1296410:CDS | 50.0% |
! | TCATGGTCCTGCAGAAGCAT+TGG | - | chr8_3:55813201-55813220 | Msa1296410:CDS | 50.0% |
TGAAGCTCCAATGCTTCTGC+AGG | + | chr8_3:55813211-55813230 | None:intergenic | 50.0% | |
TTGTCGGAACCAAAGACGCA+CGG | + | chr8_3:55813570-55813589 | None:intergenic | 50.0% | |
TGATTCACGGCATAAAGGGG+CGG | - | chr8_3:55814460-55814479 | Msa1296410:CDS | 50.0% | |
GGGGCGGAATTAAAAGAGGT+CGG | - | chr8_3:55814476-55814495 | Msa1296410:CDS | 50.0% | |
! | AGAGGTCGGTCTCAAGGTTT+TGG | - | chr8_3:55814490-55814509 | Msa1296410:CDS | 50.0% |
TGTTCTCAGCATGCCAAAGG+AGG | - | chr8_3:55814690-55814709 | Msa1296410:CDS | 50.0% | |
GTTCTCAGCATGCCAAAGGA+GGG | - | chr8_3:55814691-55814710 | Msa1296410:CDS | 50.0% | |
AAAAGGGCTGCATCCTTTGG+TGG | + | chr8_3:55815895-55815914 | None:intergenic | 50.0% | |
GGAGTCACGGTCACTTACTT+TGG | + | chr8_3:55816079-55816098 | None:intergenic | 50.0% | |
CCTACTAAGAAACCGGGAAG+CGG | - | chr8_3:55816231-55816250 | Msa1296410:five_prime_UTR | 50.0% | |
TTCCACAAACTTCCGCTTCC+CGG | + | chr8_3:55816246-55816265 | None:intergenic | 50.0% | |
AGACGTGTCCTCTTAGTGTC+TGG | - | chr8_3:55816456-55816475 | Msa1296410:five_prime_UTR | 50.0% | |
CGAGCCGAGTAGAACTACAG+AGG | + | chr8_3:55811144-55811163 | None:intergenic | 55.0% | |
GTTGTCGGTGAAGCAAGGTC+TGG | - | chr8_3:55812177-55812196 | Msa1296410:intron | 55.0% | |
GTGTCAGAGATTGCGCCTTC+TGG | - | chr8_3:55812693-55812712 | Msa1296410:CDS | 55.0% | |
!! | TGCGCCTTCTGGTTCGGAAA+CGG | - | chr8_3:55812704-55812723 | Msa1296410:CDS | 55.0% |
!! | CTGGTTCGGAAACGGTTACC+AGG | - | chr8_3:55812712-55812731 | Msa1296410:CDS | 55.0% |
!! | GGTTAGCTGTGCTGACTCCT+CGG | - | chr8_3:55813125-55813144 | Msa1296410:CDS | 55.0% |
!! | AGGAATGCCAACGGGCTACA+TGG | - | chr8_3:55813836-55813855 | Msa1296410:CDS | 55.0% |
TCATGGTTCGAGCCCTCCTT+TGG | + | chr8_3:55814706-55814725 | None:intergenic | 55.0% | |
! | ATACCTACGGGCTACTGCCT+TGG | - | chr8_3:55815064-55815083 | Msa1296410:CDS | 55.0% |
TGGGAAGCAGCTGAGGTCAT+TGG | - | chr8_3:55815867-55815886 | Msa1296410:intron | 55.0% | |
!! | GAGGTCATTGGCTCCACCAA+AGG | - | chr8_3:55815879-55815898 | Msa1296410:intron | 55.0% |
!! | TGTTGTCGTGATGGTGGTGG+CGG | + | chr8_3:55815956-55815975 | None:intergenic | 55.0% |
ACTTTCAGGGGAGCAGGGAT+AGG | + | chr8_3:55815988-55816007 | None:intergenic | 55.0% | |
! | TGGTGGTGAGATCGGAGTCA+CGG | + | chr8_3:55816092-55816111 | None:intergenic | 55.0% |
TCCGATCTCACCACCATTCC+AGG | - | chr8_3:55816096-55816115 | Msa1296410:intron | 55.0% | |
! | GCCTGGAATGGTGGTGAGAT+CGG | + | chr8_3:55816100-55816119 | None:intergenic | 55.0% |
CCGCTTCCCGGTTTCTTAGT+AGG | + | chr8_3:55816234-55816253 | None:intergenic | 55.0% | |
AACCGGGAAGCGGAAGTTTG+TGG | - | chr8_3:55816241-55816260 | Msa1296410:five_prime_UTR | 55.0% | |
CGGAAACGGTTACCAGGTCC+TGG | - | chr8_3:55812718-55812737 | Msa1296410:CDS | 60.0% | |
GTTACCAGGTCCTGGTTCCC+TGG | - | chr8_3:55812726-55812745 | Msa1296410:CDS | 60.0% | |
TTTGCCAGGGAACCAGGACC+TGG | + | chr8_3:55812733-55812752 | None:intergenic | 60.0% | |
ACACGGACCATGTAGCCCGT+TGG | + | chr8_3:55813846-55813865 | None:intergenic | 60.0% | |
GAACCAAGGCAGTAGCCCGT+AGG | + | chr8_3:55815070-55815089 | None:intergenic | 60.0% | |
!! | GTGGCGGATGTGGTACTGGT+AGG | + | chr8_3:55815940-55815959 | None:intergenic | 60.0% |
!! | GGTGGTGGCGGATGTGGTAC+TGG | + | chr8_3:55815944-55815963 | None:intergenic | 65.0% |
!! | CGTGATGGTGGTGGCGGATG+TGG | + | chr8_3:55815950-55815969 | None:intergenic | 65.0% |
Chromosome | Type | Strat | End | Strand | Name |
---|---|---|---|---|---|
chr8_3 | gene | 55810557 | 55816479 | 55810557 | ID=Msa1296410;Name=Msa1296410 |
chr8_3 | mRNA | 55810557 | 55816479 | 55810557 | ID=Msa1296410-mRNA-1;Parent=Msa1296410;Name=Msa1296410-mRNA-1;_AED=0.03;_eAED=0.03;_QI=379|1|1|1|0.8|0.66|6|150|1089 |
chr8_3 | exon | 55810557 | 55811231 | 55810557 | ID=Msa1296410-mRNA-1:exon:15997;Parent=Msa1296410-mRNA-1 |
chr8_3 | exon | 55812280 | 55812337 | 55812280 | ID=Msa1296410-mRNA-1:exon:15996;Parent=Msa1296410-mRNA-1 |
chr8_3 | exon | 55812439 | 55814884 | 55812439 | ID=Msa1296410-mRNA-1:exon:15995;Parent=Msa1296410-mRNA-1 |
chr8_3 | exon | 55815025 | 55815169 | 55815025 | ID=Msa1296410-mRNA-1:exon:15994;Parent=Msa1296410-mRNA-1 |
chr8_3 | exon | 55815549 | 55815663 | 55815549 | ID=Msa1296410-mRNA-1:exon:15993;Parent=Msa1296410-mRNA-1 |
chr8_3 | exon | 55816120 | 55816479 | 55816120 | ID=Msa1296410-mRNA-1:exon:15992;Parent=Msa1296410-mRNA-1 |
chr8_3 | five_prime_UTR | 55816120 | 55816479 | 55816120 | ID=Msa1296410-mRNA-1:five_prime_utr;Parent=Msa1296410-mRNA-1 |
chr8_3 | five_prime_UTR | 55815645 | 55815663 | 55815645 | ID=Msa1296410-mRNA-1:five_prime_utr;Parent=Msa1296410-mRNA-1 |
chr8_3 | CDS | 55815549 | 55815644 | 55815549 | ID=Msa1296410-mRNA-1:cds;Parent=Msa1296410-mRNA-1 |
chr8_3 | CDS | 55815025 | 55815169 | 55815025 | ID=Msa1296410-mRNA-1:cds;Parent=Msa1296410-mRNA-1 |
chr8_3 | CDS | 55812439 | 55814884 | 55812439 | ID=Msa1296410-mRNA-1:cds;Parent=Msa1296410-mRNA-1 |
chr8_3 | CDS | 55812280 | 55812337 | 55812280 | ID=Msa1296410-mRNA-1:cds;Parent=Msa1296410-mRNA-1 |
chr8_3 | CDS | 55810707 | 55811231 | 55810707 | ID=Msa1296410-mRNA-1:cds;Parent=Msa1296410-mRNA-1 |
chr8_3 | three_prime_UTR | 55810557 | 55810706 | 55810557 | ID=Msa1296410-mRNA-1:three_prime_utr;Parent=Msa1296410-mRNA-1 |
Gene Sequence |
Protein sequence |