Alfalfa Gene Editing Database
Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
---|---|---|---|---|---|---|---|---|---|---|---|
Msa0922340 | XP_039682654.1 | 59.563 | 366 | 103 | 5 | 1 | 366 | 1 | 321 | 1.00e-137 | 405 |
Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
---|---|---|---|---|---|---|---|---|---|---|---|
Msa0922340 | sp|Q9SQ64|COR2_PAPSO | 40.278 | 360 | 170 | 5 | 6 | 365 | 6 | 320 | 1.43e-81 | 254 |
Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
---|
Gene ID | Type | Classification |
---|
Gene ID | Type | Classification |
---|
Co-expression Network
Gene1 | Gene2 | correlation coefficient | p_value | FDR |
---|---|---|---|---|
Msa0008330 | Msa0922340 | 0.837249 | 5.811717e-57 | -8.615850e-47 |
Msa0008850 | Msa0922340 | 0.848657 | 5.331807e-60 | -8.615850e-47 |
Msa0026670 | Msa0922340 | 0.813772 | 2.161145e-51 | -8.615850e-47 |
Msa0038310 | Msa0922340 | 0.842413 | 2.625111e-58 | -8.615850e-47 |
Msa0040550 | Msa0922340 | -0.817113 | 3.901363e-52 | -8.615850e-47 |
Msa0047470 | Msa0922340 | 0.815912 | 7.247339e-52 | -8.615850e-47 |
Msa0057260 | Msa0922340 | 0.851717 | 7.400856e-61 | -8.615850e-47 |
Msa0057740 | Msa0922340 | 0.810446 | 1.148208e-50 | -8.615850e-47 |
Msa0060600 | Msa0922340 | 0.821536 | 3.833331e-53 | -8.615850e-47 |
Msa0068410 | Msa0922340 | 0.821173 | 4.648299e-53 | -8.615850e-47 |
Msa0075310 | Msa0922340 | 0.800766 | 1.235274e-48 | -8.615850e-47 |
Msa0083160 | Msa0922340 | 0.824661 | 7.151465e-54 | -8.615850e-47 |
Msa0086090 | Msa0922340 | 0.817219 | 3.694842e-52 | -8.615850e-47 |
Msa0087110 | Msa0922340 | 0.808541 | 2.944875e-50 | -8.615850e-47 |
Msa0094420 | Msa0922340 | 0.815321 | 9.814197e-52 | -8.615850e-47 |
Msa0100250 | Msa0922340 | 0.812274 | 4.604290e-51 | -8.615850e-47 |
Msa0103060 | Msa0922340 | 0.826542 | 2.561595e-54 | -8.615850e-47 |
Msa0105340 | Msa0922340 | 0.808806 | 2.584956e-50 | -8.615850e-47 |
Msa0606060 | Msa0922340 | 0.811840 | 5.725276e-51 | -8.615850e-47 |
Msa0607280 | Msa0922340 | 0.817422 | 3.324872e-52 | -8.615850e-47 |
Msa0617830 | Msa0922340 | 0.816105 | 6.565913e-52 | -8.615850e-47 |
Msa0622390 | Msa0922340 | 0.806286 | 8.856598e-50 | -8.615850e-47 |
Msa0626230 | Msa0922340 | 0.807114 | 5.919034e-50 | -8.615850e-47 |
Msa0626890 | Msa0922340 | 0.803551 | 3.302735e-49 | -8.615850e-47 |
Msa0646390 | Msa0922340 | 0.804183 | 2.441366e-49 | -8.615850e-47 |
Msa0647000 | Msa0922340 | 0.811385 | 7.188646e-51 | -8.615850e-47 |
Msa0650650 | Msa0922340 | 0.834717 | 2.550685e-56 | -8.615850e-47 |
Msa0650740 | Msa0922340 | 0.829268 | 5.662397e-55 | -8.615850e-47 |
Msa0654060 | Msa0922340 | 0.820819 | 5.607361e-53 | -8.615850e-47 |
Msa0657860 | Msa0922340 | 0.813153 | 2.955993e-51 | -8.615850e-47 |
Msa0686610 | Msa0922340 | 0.817018 | 4.099721e-52 | -8.615850e-47 |
Msa0690720 | Msa0922340 | 0.814586 | 1.428426e-51 | -8.615850e-47 |
Msa0698900 | Msa0922340 | 0.817775 | 2.768628e-52 | -8.615850e-47 |
Msa0702200 | Msa0922340 | 0.812059 | 5.128353e-51 | -8.615850e-47 |
Msa0719340 | Msa0922340 | 0.805944 | 1.045266e-49 | -8.615850e-47 |
Msa0725480 | Msa0922340 | -0.823207 | 1.568531e-53 | -8.615850e-47 |
Msa0726610 | Msa0922340 | 0.800595 | 1.339049e-48 | -8.615850e-47 |
Msa0739610 | Msa0922340 | 0.816954 | 4.237521e-52 | -8.615850e-47 |
Msa0748980 | Msa0922340 | 0.816736 | 4.740881e-52 | -8.615850e-47 |
Msa0766100 | Msa0922340 | -0.807256 | 5.525102e-50 | -8.615850e-47 |
Msa0768490 | Msa0922340 | 0.850110 | 2.098363e-60 | -8.615850e-47 |
Msa0789270 | Msa0922340 | 0.826678 | 2.378454e-54 | -8.615850e-47 |
Msa0789280 | Msa0922340 | 0.826670 | 2.388363e-54 | -8.615850e-47 |
Msa0789290 | Msa0922340 | 0.828118 | 1.073719e-54 | -8.615850e-47 |
Msa0789300 | Msa0922340 | 0.828495 | 8.711982e-55 | -8.615850e-47 |
Msa0818440 | Msa0922340 | 0.802952 | 4.395350e-49 | -8.615850e-47 |
Msa0820670 | Msa0922340 | 0.800634 | 1.314467e-48 | -8.615850e-47 |
Msa0825520 | Msa0922340 | 0.805825 | 1.107082e-49 | -8.615850e-47 |
Msa0828570 | Msa0922340 | 0.842448 | 2.569684e-58 | -8.615850e-47 |
Msa0835550 | Msa0922340 | 0.802245 | 6.148266e-49 | -8.615850e-47 |
Msa0836190 | Msa0922340 | 0.814250 | 1.695356e-51 | -8.615850e-47 |
Msa0837990 | Msa0922340 | 0.807877 | 4.078806e-50 | -8.615850e-47 |
Msa0842270 | Msa0922340 | 0.816582 | 5.134951e-52 | -8.615850e-47 |
Msa0132620 | Msa0922340 | 0.822495 | 2.297319e-53 | -8.615850e-47 |
Msa0151690 | Msa0922340 | 0.819708 | 1.007891e-52 | -8.615850e-47 |
Msa0164360 | Msa0922340 | 0.813268 | 2.789877e-51 | -8.615850e-47 |
Msa0175530 | Msa0922340 | 0.831279 | 1.826447e-55 | -8.615850e-47 |
Msa0181410 | Msa0922340 | 0.849530 | 3.049079e-60 | -8.615850e-47 |
Msa0198440 | Msa0922340 | 0.813132 | 2.988650e-51 | -8.615850e-47 |
Msa0213650 | Msa0922340 | 0.806923 | 6.496645e-50 | -8.615850e-47 |
Msa0222070 | Msa0922340 | 0.821899 | 3.159357e-53 | -8.615850e-47 |
Msa0222120 | Msa0922340 | 0.824182 | 9.269924e-54 | -8.615850e-47 |
Msa0227290 | Msa0922340 | 0.802412 | 5.680280e-49 | -8.615850e-47 |
Msa0227490 | Msa0922340 | 0.829685 | 4.483656e-55 | -8.615850e-47 |
Msa0227500 | Msa0922340 | 0.821113 | 4.797553e-53 | -8.615850e-47 |
Msa0365150 | Msa0922340 | 0.816532 | 5.267901e-52 | -8.615850e-47 |
Msa0371610 | Msa0922340 | 0.800253 | 1.571650e-48 | -8.615850e-47 |
Msa0377280 | Msa0922340 | 0.846331 | 2.322553e-59 | -8.615850e-47 |
Msa0402640 | Msa0922340 | 0.816105 | 6.565213e-52 | -8.615850e-47 |
Msa0404690 | Msa0922340 | 0.847177 | 1.364076e-59 | -8.615850e-47 |
Msa0413740 | Msa0922340 | 0.815988 | 6.971575e-52 | -8.615850e-47 |
Msa0419620 | Msa0922340 | -0.826588 | 2.498458e-54 | -8.615850e-47 |
Msa0427050 | Msa0922340 | 0.820270 | 7.494709e-53 | -8.615850e-47 |
Msa0456480 | Msa0922340 | 0.821219 | 4.535009e-53 | -8.615850e-47 |
Msa0458790 | Msa0922340 | 0.802348 | 5.854016e-49 | -8.615850e-47 |
Msa0462590 | Msa0922340 | 0.837467 | 5.109556e-57 | -8.615850e-47 |
Msa0467480 | Msa0922340 | 0.808051 | 3.745393e-50 | -8.615850e-47 |
Msa0469270 | Msa0922340 | 0.806176 | 9.339348e-50 | -8.615850e-47 |
Msa0473450 | Msa0922340 | 0.801966 | 7.015554e-49 | -8.615850e-47 |
Msa0252180 | Msa0922340 | 0.803850 | 2.863745e-49 | -8.615850e-47 |
Msa0253370 | Msa0922340 | 0.815576 | 8.615091e-52 | -8.615850e-47 |
Msa0263620 | Msa0922340 | 0.825417 | 4.740568e-54 | -8.615850e-47 |
Msa0265210 | Msa0922340 | 0.810237 | 1.273400e-50 | -8.615850e-47 |
Msa0270460 | Msa0922340 | 0.803665 | 3.127533e-49 | -8.615850e-47 |
Msa0278670 | Msa0922340 | 0.808889 | 2.480611e-50 | -8.615850e-47 |
Msa0281570 | Msa0922340 | 0.800940 | 1.138684e-48 | -8.615850e-47 |
Msa0282170 | Msa0922340 | 0.839173 | 1.856626e-57 | -8.615850e-47 |
Msa0288240 | Msa0922340 | 0.806430 | 8.256212e-50 | -8.615850e-47 |
Msa0288330 | Msa0922340 | 0.806466 | 8.115875e-50 | -8.615850e-47 |
Msa0301180 | Msa0922340 | 0.822310 | 2.536550e-53 | -8.615850e-47 |
Msa0312570 | Msa0922340 | 0.809412 | 1.916640e-50 | -8.615850e-47 |
Msa0318070 | Msa0922340 | 0.814000 | 1.925329e-51 | -8.615850e-47 |
Msa0320540 | Msa0922340 | 0.837954 | 3.831246e-57 | -8.615850e-47 |
Msa0323630 | Msa0922340 | 0.823215 | 1.561447e-53 | -8.615850e-47 |
Msa0330400 | Msa0922340 | 0.817052 | 4.026988e-52 | -8.615850e-47 |
Msa0336270 | Msa0922340 | 0.864041 | 1.617498e-64 | -8.615850e-47 |
Msa0344070 | Msa0922340 | 0.821447 | 4.017733e-53 | -8.615850e-47 |
Msa0505390 | Msa0922340 | 0.815845 | 7.501640e-52 | -8.615850e-47 |
Msa0511720 | Msa0922340 | -0.813315 | 2.723960e-51 | -8.615850e-47 |
Msa0532880 | Msa0922340 | 0.806396 | 8.396376e-50 | -8.615850e-47 |
Msa0535450 | Msa0922340 | 0.810537 | 1.097179e-50 | -8.615850e-47 |
Msa0538270 | Msa0922340 | 0.810934 | 9.003130e-51 | -8.615850e-47 |
Msa0540340 | Msa0922340 | 0.801010 | 1.101827e-48 | -8.615850e-47 |
Msa0549740 | Msa0922340 | 0.803808 | 2.920735e-49 | -8.615850e-47 |
Msa0553520 | Msa0922340 | 0.832879 | 7.349035e-56 | -8.615850e-47 |
Msa0576600 | Msa0922340 | 0.829160 | 6.012403e-55 | -8.615850e-47 |
Msa0577870 | Msa0922340 | 0.823594 | 1.273721e-53 | -8.615850e-47 |
Msa0579340 | Msa0922340 | 0.834962 | 2.213094e-56 | -8.615850e-47 |
Msa0595780 | Msa0922340 | 0.812638 | 3.832823e-51 | -8.615850e-47 |
Msa0598250 | Msa0922340 | 0.808750 | 2.656259e-50 | -8.615850e-47 |
Msa0847200 | Msa0922340 | 0.828620 | 8.126230e-55 | -8.615850e-47 |
Msa0851740 | Msa0922340 | 0.800090 | 1.696337e-48 | -8.615850e-47 |
Msa0895850 | Msa0922340 | 0.850619 | 1.510905e-60 | -8.615850e-47 |
Msa0895860 | Msa0922340 | 0.811719 | 6.082801e-51 | -8.615850e-47 |
Msa0896210 | Msa0922340 | 0.816283 | 5.989225e-52 | -8.615850e-47 |
Msa0899700 | Msa0922340 | 0.820098 | 8.207098e-53 | -8.615850e-47 |
Msa0903730 | Msa0922340 | 0.835661 | 1.473290e-56 | -8.615850e-47 |
Msa0907700 | Msa0922340 | 0.807098 | 5.966321e-50 | -8.615850e-47 |
Msa0922340 | Msa0934830 | 0.806323 | 8.699748e-50 | -8.615850e-47 |
Msa0922340 | Msa0955300 | 0.823532 | 1.316657e-53 | -8.615850e-47 |
Msa0922340 | Msa0955310 | 0.827082 | 1.904333e-54 | -8.615850e-47 |
Msa0922340 | Msa0961230 | 0.816338 | 5.823670e-52 | -8.615850e-47 |
Msa0922340 | Msa0964680 | 0.828012 | 1.138875e-54 | -8.615850e-47 |
Msa0922340 | Msa0971860 | 0.806829 | 6.802429e-50 | -8.615850e-47 |
Msa0922340 | Msa0973230 | 0.803853 | 2.858463e-49 | -8.615850e-47 |
Msa0922340 | Msa0995670 | 0.903838 | 2.291267e-79 | -8.615850e-47 |
Msa0922340 | Msa1016670 | 0.801726 | 7.860160e-49 | -8.615850e-47 |
Msa0922340 | Msa1033160 | 0.806410 | 8.338095e-50 | -8.615850e-47 |
Msa0922340 | Msa1036350 | 0.802844 | 4.626800e-49 | -8.615850e-47 |
Msa0922340 | Msa1043870 | 0.816014 | 6.879084e-52 | -8.615850e-47 |
Msa0922340 | Msa1058010 | 0.808705 | 2.716668e-50 | -8.615850e-47 |
Msa0922340 | Msa1102170 | 0.809102 | 2.233633e-50 | -8.615850e-47 |
Msa0922340 | Msa1102180 | 0.806541 | 7.824471e-50 | -8.615850e-47 |
Msa0922340 | Msa1116140 | 0.815457 | 9.154821e-52 | -8.615850e-47 |
Msa0922340 | Msa1125100 | 0.804934 | 1.702208e-49 | -8.615850e-47 |
Msa0922340 | Msa1125150 | 0.800324 | 1.520287e-48 | -8.615850e-47 |
Msa0922340 | Msa1133660 | 0.803096 | 4.104077e-49 | -8.615850e-47 |
Msa0922340 | Msa1134560 | 0.800198 | 1.612821e-48 | -8.615850e-47 |
Msa0922340 | Msa1164800 | -0.802810 | 4.702153e-49 | -8.615850e-47 |
Msa0922340 | Msa1208810 | 0.800122 | 1.671186e-48 | -8.615850e-47 |
Msa0922340 | Msa1220740 | 0.802331 | 5.903353e-49 | -8.615850e-47 |
Msa0922340 | Msa1221570 | -0.809662 | 1.693661e-50 | -8.615850e-47 |
Msa0922340 | Msa1226600 | 0.805263 | 1.452651e-49 | -8.615850e-47 |
Msa0922340 | Msa1241820 | 0.824996 | 5.962639e-54 | -8.615850e-47 |
Msa0922340 | Msa1248400 | 0.809269 | 2.056927e-50 | -8.615850e-47 |
Msa0922340 | Msa1264140 | 0.822995 | 1.757562e-53 | -8.615850e-47 |
Msa0922340 | Msa1282920 | 0.809485 | 1.848969e-50 | -8.615850e-47 |
Msa0922340 | Msa1284030 | 0.820601 | 6.291351e-53 | -8.615850e-47 |
Msa0922340 | Msa1293580 | 0.818104 | 2.332803e-52 | -8.615850e-47 |
Msa0922340 | Msa1302780 | 0.831954 | 1.245563e-55 | -8.615850e-47 |
Msa0922340 | Msa1303720 | 0.823915 | 1.070774e-53 | -8.615850e-47 |
Msa0922340 | Msa1314330 | 0.822876 | 1.872977e-53 | -8.615850e-47 |
Msa0922340 | Msa1323060 | 0.840924 | 6.487793e-58 | -8.615850e-47 |
Msa0922340 | Msa1327820 | 0.825754 | 3.945199e-54 | -8.615850e-47 |
Msa0922340 | Msa1349360 | 0.833991 | 3.879701e-56 | -8.615850e-47 |
Msa0922340 | Msa1358870 | -0.803424 | 3.509729e-49 | -8.615850e-47 |
Msa0922340 | Msa1367940 | 0.807857 | 4.118607e-50 | -8.615850e-47 |
Msa0922340 | Msa1368980 | 0.802432 | 5.625906e-49 | -8.615850e-47 |
Msa0922340 | Msa1370910 | -0.805324 | 1.410401e-49 | -8.615850e-47 |
Msa0922340 | Msa1373910 | 0.803639 | 3.166751e-49 | -8.615850e-47 |
Msa0922340 | Msa1382720 | 0.804015 | 2.645575e-49 | -8.615850e-47 |
Msa0922340 | Msa1384620 | 0.809991 | 1.439354e-50 | -8.615850e-47 |
Msa0922340 | Msa1387090 | 0.812369 | 4.388935e-51 | -8.615850e-47 |
Msa0922340 | Msa1397540 | 0.823104 | 1.657445e-53 | -8.615850e-47 |
Msa0922340 | Msa1409520 | 0.802503 | 5.440365e-49 | -8.615850e-47 |
Msa0922340 | Msa1425540 | 0.808020 | 3.802533e-50 | -8.615850e-47 |
Msa0922340 | Msa1428420 | 0.806731 | 7.134526e-50 | -8.615850e-47 |
Msa0922340 | Msa1431000 | 0.805437 | 1.335840e-49 | -8.615850e-47 |
Msa0922340 | Msa1431730 | 0.803127 | 4.043312e-49 | -8.615850e-47 |
Msa0922340 | Msa1435470 | 0.805376 | 1.375656e-49 | -8.615850e-47 |
Msa0922340 | Msa1439070 | 0.802960 | 4.378251e-49 | -8.615850e-47 |
Msa0922340 | Msa1440180 | 0.803733 | 3.028313e-49 | -8.615850e-47 |
Msa0922340 | Msa1447560 | 0.814871 | 1.235471e-51 | -8.615850e-47 |
Msa0922340 | Msa1449740 | 0.806097 | 9.705960e-50 | -8.615850e-47 |
Msa0922340 | Msa1450020 | 0.835675 | 1.461986e-56 | -8.615850e-47 |
Msa0922340 | Msa1457180 | 0.802392 | 5.733992e-49 | -8.615850e-47 |
Msa0922340 | Msa1458920 | 0.813391 | 2.620845e-51 | -8.615850e-47 |
PPI
Gene1 | Gene2 | Type |
---|
Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
---|---|---|---|---|---|---|---|---|---|---|---|
Msa0922340 | MtrunA17_Chr6g0480021 | 71.575 | 292 | 32 | 3 | 126 | 366 | 12 | 303 | 1.27e-141 | 404 |
Msa0922340 | MtrunA17_Chr6g0480021 | 63.830 | 94 | 34 | 0 | 1 | 94 | 1 | 94 | 5.39e-34 | 127 |
Msa0922340 | MtrunA17_Chr4g0036301 | 82.090 | 134 | 24 | 0 | 233 | 366 | 39 | 172 | 1.96e-77 | 236 |
Msa0922340 | MtrunA17_Chr4g0036261 | 79.699 | 133 | 27 | 0 | 233 | 365 | 51 | 183 | 4.11e-74 | 228 |
Msa0922340 | MtrunA17_Chr1g0173621 | 38.172 | 372 | 166 | 8 | 1 | 365 | 1 | 315 | 2.20e-73 | 230 |
Msa0922340 | MtrunA17_Chr4g0036321 | 78.195 | 133 | 29 | 0 | 233 | 365 | 39 | 171 | 4.67e-72 | 222 |
Msa0922340 | MtrunA17_Chr6g0480011 | 98.113 | 106 | 2 | 0 | 1 | 106 | 1 | 106 | 2.22e-67 | 215 |
Msa0922340 | MtrunA17_Chr6g0480011 | 65.468 | 139 | 48 | 0 | 227 | 365 | 183 | 321 | 1.47e-60 | 197 |
Msa0922340 | MtrunA17_Chr6g0480011 | 65.625 | 96 | 33 | 0 | 126 | 221 | 12 | 107 | 8.42e-37 | 135 |
Msa0922340 | MtrunA17_Chr5g0447941 | 37.398 | 369 | 167 | 13 | 1 | 363 | 1 | 311 | 2.99e-60 | 196 |
Msa0922340 | MtrunA17_Chr5g0447951 | 37.127 | 369 | 168 | 13 | 1 | 363 | 1 | 311 | 8.93e-60 | 195 |
Msa0922340 | MtrunA17_Chr5g0447961 | 37.127 | 369 | 168 | 13 | 1 | 363 | 1 | 311 | 8.93e-60 | 195 |
Msa0922340 | MtrunA17_Chr6g0479981 | 37.459 | 307 | 122 | 7 | 126 | 363 | 12 | 317 | 1.47e-54 | 182 |
Msa0922340 | MtrunA17_Chr6g0479981 | 53.774 | 106 | 49 | 0 | 1 | 106 | 1 | 106 | 3.74e-33 | 125 |
Msa0922340 | MtrunA17_Chr4g0036311 | 77.000 | 100 | 23 | 0 | 126 | 225 | 12 | 111 | 2.48e-52 | 169 |
Msa0922340 | MtrunA17_Chr4g0036311 | 64.151 | 106 | 38 | 0 | 1 | 106 | 1 | 106 | 3.70e-44 | 148 |
Msa0922340 | MtrunA17_Chr4g0036291 | 80.412 | 97 | 19 | 0 | 126 | 222 | 12 | 108 | 5.45e-52 | 168 |
Msa0922340 | MtrunA17_Chr4g0036291 | 65.094 | 106 | 37 | 0 | 1 | 106 | 1 | 106 | 4.67e-45 | 150 |
Msa0922340 | MtrunA17_Chr6g0479791 | 94.253 | 87 | 3 | 1 | 282 | 366 | 18 | 104 | 5.59e-52 | 168 |
Msa0922340 | MtrunA17_Chr8g0368921 | 32.967 | 364 | 180 | 13 | 11 | 365 | 10 | 318 | 2.07e-51 | 174 |
Msa0922340 | MtrunA17_Chr8g0368921 | 37.624 | 101 | 55 | 3 | 124 | 221 | 9 | 104 | 7.71e-11 | 62.8 |
Msa0922340 | MtrunA17_Chr4g0018921 | 33.791 | 364 | 179 | 12 | 9 | 365 | 6 | 314 | 5.68e-51 | 172 |
Msa0922340 | MtrunA17_Chr4g0018921 | 48.544 | 103 | 47 | 5 | 120 | 221 | 3 | 100 | 9.73e-20 | 88.6 |
Msa0922340 | MtrunA17_Chr6g0479811 | 63.717 | 113 | 41 | 0 | 235 | 347 | 1 | 113 | 2.03e-48 | 159 |
Msa0922340 | MtrunA17_Chr4g0036251 | 76.289 | 97 | 17 | 2 | 126 | 222 | 12 | 102 | 2.76e-46 | 153 |
Msa0922340 | MtrunA17_Chr4g0036251 | 61.321 | 106 | 35 | 2 | 1 | 106 | 1 | 100 | 3.96e-38 | 132 |
Msa0922340 | MtrunA17_Chr4g0036051 | 30.029 | 343 | 175 | 10 | 9 | 339 | 3 | 292 | 5.31e-39 | 141 |
Msa0922340 | MtrunA17_Chr8g0368931 | 28.650 | 363 | 207 | 5 | 4 | 365 | 3 | 314 | 3.34e-38 | 139 |
Msa0922340 | MtrunA17_Chr3g0121001 | 52.985 | 134 | 49 | 4 | 233 | 363 | 191 | 313 | 3.54e-36 | 133 |
Msa0922340 | MtrunA17_Chr3g0121001 | 49.123 | 114 | 54 | 2 | 2 | 112 | 3 | 115 | 3.26e-25 | 103 |
Msa0922340 | MtrunA17_Chr3g0121001 | 48.454 | 97 | 46 | 3 | 126 | 220 | 15 | 109 | 1.98e-22 | 96.3 |
Msa0922340 | MtrunA17_Chr4g0009581 | 30.565 | 301 | 140 | 7 | 124 | 363 | 10 | 302 | 1.88e-34 | 129 |
Msa0922340 | MtrunA17_Chr4g0009581 | 43.210 | 81 | 42 | 2 | 11 | 91 | 11 | 87 | 1.85e-12 | 67.4 |
Msa0922340 | MtrunA17_Chr4g0009531 | 41.791 | 134 | 75 | 2 | 233 | 365 | 181 | 312 | 4.57e-32 | 122 |
Msa0922340 | MtrunA17_Chr4g0009531 | 43.617 | 94 | 47 | 3 | 126 | 218 | 11 | 99 | 4.92e-14 | 72.0 |
Msa0922340 | MtrunA17_Chr4g0009531 | 42.553 | 94 | 50 | 2 | 11 | 104 | 10 | 99 | 2.34e-13 | 70.1 |
Msa0922340 | MtrunA17_Chr7g0239701 | 46.269 | 134 | 70 | 2 | 233 | 365 | 185 | 317 | 2.89e-31 | 120 |
Msa0922340 | MtrunA17_Chr4g0009621 | 40.299 | 134 | 75 | 2 | 233 | 365 | 99 | 228 | 8.42e-28 | 108 |
Msa0922340 | MtrunA17_Chr7g0243551 | 37.069 | 116 | 70 | 1 | 229 | 344 | 184 | 296 | 1.86e-19 | 87.8 |
Msa0922340 | MtrunA17_Chr7g0243551 | 40.816 | 98 | 53 | 2 | 124 | 221 | 16 | 108 | 1.64e-16 | 79.3 |
Msa0922340 | MtrunA17_Chr7g0243551 | 41.667 | 96 | 51 | 2 | 11 | 106 | 17 | 107 | 5.40e-16 | 77.8 |
Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
---|---|---|---|---|---|---|---|---|---|---|---|
Msa0922340 | AT1G59960.1 | 35.946 | 370 | 187 | 6 | 1 | 365 | 1 | 325 | 1.02e-73 | 232 |
Msa0922340 | AT1G59950.1 | 36.932 | 352 | 176 | 6 | 15 | 365 | 13 | 319 | 4.99e-71 | 225 |
Msa0922340 | AT5G62420.1 | 32.961 | 358 | 187 | 10 | 11 | 365 | 8 | 315 | 6.87e-51 | 172 |
Msa0922340 | AT2G21260.1 | 29.970 | 337 | 185 | 9 | 8 | 339 | 2 | 292 | 1.43e-39 | 142 |
Msa0922340 | AT2G21250.1 | 29.080 | 337 | 188 | 9 | 8 | 339 | 2 | 292 | 1.22e-37 | 137 |
Msa0922340 | AT2G37790.1 | 46.617 | 133 | 71 | 0 | 233 | 365 | 181 | 313 | 1.33e-37 | 137 |
Msa0922340 | AT2G37790.1 | 42.268 | 97 | 50 | 3 | 11 | 106 | 10 | 101 | 3.66e-14 | 72.8 |
Msa0922340 | AT2G37790.1 | 42.857 | 98 | 50 | 3 | 124 | 220 | 9 | 101 | 5.68e-14 | 72.4 |
Msa0922340 | AT2G37760.2 | 30.645 | 310 | 139 | 7 | 124 | 365 | 9 | 310 | 3.45e-36 | 134 |
Msa0922340 | AT2G37760.2 | 43.750 | 96 | 46 | 2 | 11 | 106 | 10 | 97 | 3.81e-16 | 78.6 |
Msa0922340 | AT2G37760.1 | 30.645 | 310 | 139 | 7 | 124 | 365 | 9 | 310 | 3.45e-36 | 134 |
Msa0922340 | AT2G37760.1 | 43.750 | 96 | 46 | 2 | 11 | 106 | 10 | 97 | 3.81e-16 | 78.6 |
Msa0922340 | AT2G37770.2 | 46.269 | 134 | 71 | 1 | 233 | 365 | 181 | 314 | 4.21e-34 | 128 |
Msa0922340 | AT2G37770.2 | 40.367 | 109 | 61 | 2 | 3 | 111 | 2 | 106 | 7.80e-16 | 77.8 |
Msa0922340 | AT2G37770.2 | 43.750 | 96 | 48 | 3 | 126 | 220 | 11 | 101 | 4.01e-14 | 72.8 |
Msa0922340 | AT3G53880.1 | 44.776 | 134 | 73 | 1 | 233 | 365 | 181 | 314 | 1.47e-33 | 127 |
Msa0922340 | AT3G53880.1 | 41.667 | 96 | 52 | 2 | 11 | 106 | 10 | 101 | 1.28e-11 | 65.5 |
Msa0922340 | AT2G37760.6 | 41.429 | 140 | 81 | 1 | 227 | 365 | 125 | 264 | 1.04e-30 | 118 |
Msa0922340 | AT2G37760.7 | 41.429 | 140 | 81 | 1 | 227 | 365 | 125 | 264 | 1.04e-30 | 118 |
Msa0922340 | AT2G37760.5 | 29.825 | 285 | 125 | 6 | 124 | 341 | 9 | 285 | 3.09e-30 | 117 |
Msa0922340 | AT2G37760.5 | 43.750 | 96 | 46 | 2 | 11 | 106 | 10 | 97 | 3.18e-16 | 78.6 |
Msa0922340 | AT2G37760.4 | 29.371 | 286 | 127 | 6 | 124 | 342 | 9 | 286 | 7.09e-30 | 116 |
Msa0922340 | AT2G37760.4 | 43.750 | 96 | 46 | 2 | 11 | 106 | 10 | 97 | 3.23e-16 | 78.6 |
Msa0922340 | AT2G37760.3 | 29.371 | 286 | 127 | 6 | 124 | 342 | 9 | 286 | 7.09e-30 | 116 |
Msa0922340 | AT2G37760.3 | 43.750 | 96 | 46 | 2 | 11 | 106 | 10 | 97 | 3.23e-16 | 78.6 |
Msa0922340 | AT3G53880.2 | 43.925 | 107 | 60 | 0 | 233 | 339 | 181 | 287 | 3.84e-24 | 101 |
Msa0922340 | AT3G53880.2 | 41.667 | 96 | 52 | 2 | 11 | 106 | 10 | 101 | 1.18e-11 | 65.5 |
Msa0922340 | AT5G01670.1 | 37.313 | 134 | 78 | 4 | 233 | 363 | 189 | 319 | 1.10e-23 | 100 |
Msa0922340 | AT5G01670.1 | 36.538 | 104 | 61 | 2 | 3 | 106 | 10 | 108 | 3.53e-14 | 73.2 |
Msa0922340 | AT5G01670.2 | 37.313 | 134 | 78 | 4 | 233 | 363 | 216 | 346 | 1.44e-23 | 100 |
Msa0922340 | AT5G01670.2 | 34.211 | 114 | 62 | 4 | 127 | 237 | 20 | 123 | 1.39e-11 | 65.5 |
Msa0922340 | AT2G21250.2 | 27.698 | 278 | 150 | 9 | 8 | 280 | 2 | 233 | 3.68e-21 | 91.7 |
Msa0922340 | AT2G21260.2 | 36.111 | 108 | 66 | 1 | 233 | 337 | 115 | 222 | 9.22e-19 | 85.1 |
Msa0922340 | AT2G37770.1 | 41.346 | 104 | 57 | 2 | 3 | 106 | 2 | 101 | 3.59e-16 | 78.6 |
Msa0922340 | AT2G37770.1 | 43.750 | 96 | 48 | 3 | 126 | 220 | 11 | 101 | 2.21e-14 | 73.2 |
Find 95 sgRNAs with CRISPR-Local
Find 356 sgRNAs with CRISPR-GE
CRISPR-Local
sgRNA_sequence | on_target_score | Position | Region |
---|---|---|---|
TGGGAGCATACAAAGTATTT+TGG | 0.154726 | 6_2:-60643925 | Msa0922340:CDS |
TGAAGCTCTCACTTCAATTT+TGG | 0.164436 | 6_2:-60644704 | Msa0922340:CDS |
TTCGATTCTGCTTCTGTCTA+TGG | 0.228641 | 6_2:-60648520 | Msa0922340:CDS |
TTTGATACAGCTTCTATCTA+TGG | 0.288397 | 6_2:-60644652 | Msa0922340:CDS |
AACCTCTTCATCATTTATTC+TGG | 0.317571 | 6_2:-60642964 | Msa0922340:three_prime_UTR |
GCAGTTCCTAGGCCTATTAT+TGG | 0.318436 | 6_2:+60644748 | None:intergenic |
CCTGAGTTTAACAACACTTC+TGG | 0.338648 | 6_2:+60648649 | None:intergenic |
TTGGGGTTCTAATGCTGTTA+TGG | 0.341183 | 6_2:-60643906 | Msa0922340:CDS |
CTTTACAAAATATGCATGAT+TGG | 0.345055 | 6_2:+60648725 | None:intergenic |
GAAACTGAACCAAGAAGAAT+TGG | 0.348726 | 6_2:-60643338 | Msa0922340:CDS |
TGATCATGAGTTGATATATA+TGG | 0.356817 | 6_2:-60643091 | Msa0922340:three_prime_UTR |
TTCAGCAATGAATGAGATAA+TGG | 0.359483 | 6_2:+60643119 | None:intergenic |
TATGGAGAATCCTATTCTTC+AGG | 0.366943 | 6_2:-60643888 | Msa0922340:CDS |
GGGGAAAAGATGCCAATAAT+AGG | 0.375376 | 6_2:-60644760 | Msa0922340:CDS |
AGGGAATTCTGCATGAATAA+AGG | 0.386783 | 6_2:-60643974 | Msa0922340:CDS |
CAAGTCCTTGGAAGATTTGT+GGG | 0.390805 | 6_2:-60643245 | Msa0922340:CDS |
GAAGTGAGAGCTTCATTTGA+TGG | 0.392979 | 6_2:+60644712 | None:intergenic |
TCAGCAATTTCCTGAAGAAT+AGG | 0.400823 | 6_2:+60643878 | None:intergenic |
GAAGCAAGAACATCATTTGA+TGG | 0.416424 | 6_2:+60648580 | None:intergenic |
AAAATCTAGAAATATTTGAT+TGG | 0.419720 | 6_2:-60643360 | Msa0922340:CDS |
TTTGTTGATGCAATCAAAGT+TGG | 0.422988 | 6_2:-60648553 | Msa0922340:CDS |
ATAAATGATGAAGAGGTTGA+TGG | 0.430206 | 6_2:+60642969 | None:intergenic |
GGACACAAAATGCCAGTCAT+AGG | 0.432511 | 6_2:-60648628 | Msa0922340:CDS |
TCTTGCAGATAGCACTAAGA+TGG | 0.451601 | 6_2:-60643441 | Msa0922340:intron |
TTTAATGTGGTCTTAAGAGC+TGG | 0.453099 | 6_2:+60648373 | None:intergenic |
ACAAGTCCTTGGAAGATTTG+TGG | 0.453769 | 6_2:-60643246 | Msa0922340:CDS |
AAATGGACCTTACAAGTCCT+TGG | 0.462810 | 6_2:-60643257 | Msa0922340:CDS |
AGCTTGGCCAAGAGGTTCTT+CGG | 0.463692 | 6_2:+60644627 | None:intergenic |
CATCTATATAAAGTGGTTTG+TGG | 0.464710 | 6_2:+60648763 | None:intergenic |
TCCACAATGCAGACTTTACA+AGG | 0.467068 | 6_2:-60643299 | Msa0922340:CDS |
GAGGAGTTGTAGCAGTTCCT+AGG | 0.470932 | 6_2:+60644737 | None:intergenic |
CAAGACATAGCAGCTGCAAA+AGG | 0.471565 | 6_2:-60646199 | Msa0922340:CDS |
AGCATCAGTGCACCATAGCT+TGG | 0.473444 | 6_2:+60644546 | None:intergenic |
TCCTCTACTTGACTAAATCT+AGG | 0.475410 | 6_2:+60642894 | None:intergenic |
TAGAAAGAAGAGTGTAGCTC+AGG | 0.477815 | 6_2:-60643852 | Msa0922340:intron |
AGAGCTTCATTTGATGGAAG+AGG | 0.479484 | 6_2:+60644718 | None:intergenic |
GGCACTTCATCTATATAAAG+TGG | 0.492167 | 6_2:+60648756 | None:intergenic |
AGACAGAAGCAGAATCGAAA+TGG | 0.496929 | 6_2:+60648524 | None:intergenic |
TGTGTGTGCATGGTCACCAT+TGG | 0.497595 | 6_2:-60643945 | Msa0922340:CDS |
AAATATGCATGATTGGCAAT+TGG | 0.499219 | 6_2:+60648732 | None:intergenic |
GTGTGTGCATGGTCACCATT+GGG | 0.511118 | 6_2:-60643944 | Msa0922340:CDS |
AAATCTTCCAAGGACTTGTA+AGG | 0.513155 | 6_2:+60643250 | None:intergenic |
AGGTAGAAATGAATCCATCT+TGG | 0.519132 | 6_2:-60644012 | Msa0922340:CDS |
TATGGAACAGAAGAAGCTAT+AGG | 0.520405 | 6_2:-60648502 | Msa0922340:CDS |
AGAGAACAATGCTTGCTTGA+GGG | 0.524372 | 6_2:+60644489 | None:intergenic |
AGAACAAAGAAAAGCATGGC+AGG | 0.525142 | 6_2:-60648682 | Msa0922340:exon |
AAGATGCCAATAATAGGCCT+AGG | 0.525430 | 6_2:-60644754 | Msa0922340:CDS |
TAAACAAATTACAATGATCA+AGG | 0.527972 | 6_2:+60642857 | None:intergenic |
AACCAGAATAAATGATGAAG+AGG | 0.530460 | 6_2:+60642962 | None:intergenic |
TTTGTGGTGATATGTGGTGA+TGG | 0.533465 | 6_2:+60648779 | None:intergenic |
AAAATGCCAGTCATAGGAAT+GGG | 0.533740 | 6_2:-60648622 | Msa0922340:CDS |
TCAATACAAGATCTTGCTCA+AGG | 0.538617 | 6_2:+60643214 | None:intergenic |
TCCTAGATTTAGTCAAGTAG+AGG | 0.541538 | 6_2:-60642895 | Msa0922340:three_prime_UTR |
CTTGGCAGCAAGGAAAACTC+AGG | 0.549272 | 6_2:-60643994 | Msa0922340:CDS |
TATGGTACCGAAGAACCTCT+TGG | 0.552223 | 6_2:-60644634 | Msa0922340:CDS |
GTGTCAAAAGCTTTAGAGCT+CGG | 0.554884 | 6_2:-60644604 | Msa0922340:CDS |
CCAGAAGTGTTGTTAAACTC+AGG | 0.555434 | 6_2:-60648649 | Msa0922340:CDS |
GTGGCAAAAGCTTTAGAAGA+AGG | 0.556305 | 6_2:-60648472 | Msa0922340:CDS |
CAAAATGCCAGTCATAGGAA+TGG | 0.558036 | 6_2:-60648623 | Msa0922340:CDS |
TCACCATGACCTTGTTCTCA+AGG | 0.559342 | 6_2:-60644524 | Msa0922340:CDS |
AAGACATAGCAGCTGCAAAA+GGG | 0.559376 | 6_2:-60646198 | Msa0922340:CDS |
GGTTATAGCTTACTTTAATG+TGG | 0.560210 | 6_2:+60648360 | None:intergenic |
ATGAATCCATCTTGGCAGCA+AGG | 0.561015 | 6_2:-60644004 | Msa0922340:CDS |
TAATCTGCATCAGTGTTCCA+TGG | 0.566258 | 6_2:+60648409 | None:intergenic |
GAAGTTCCCATTCCTATGAC+TGG | 0.576432 | 6_2:+60648616 | None:intergenic |
AATGTCTGTAACCAATGTCA+AGG | 0.577476 | 6_2:+60644674 | None:intergenic |
TTGGTTGATGCCCTTGACAT+TGG | 0.578089 | 6_2:-60644685 | Msa0922340:CDS |
AAAAGGGAAGACTACAGCTC+AGG | 0.578206 | 6_2:-60646182 | Msa0922340:intron |
TTGTGGTGATATGTGGTGAT+GGG | 0.580324 | 6_2:+60648780 | None:intergenic |
AACAAGAACAAAGAAAAGCA+TGG | 0.582770 | 6_2:-60648686 | Msa0922340:exon |
GTGTTTGTGCAAGATAAAGA+AGG | 0.586460 | 6_2:+60643153 | None:intergenic |
GAACAATGCTTGCTTGAGGG+TGG | 0.589137 | 6_2:+60644492 | None:intergenic |
TGAAAAGCTTCAACAAAGAG+AGG | 0.595864 | 6_2:-60643390 | Msa0922340:CDS |
ACCATCCCACAAATCTTCCA+AGG | 0.600190 | 6_2:+60643240 | None:intergenic |
CAATACAAGATCTTGCTCAA+GGG | 0.600515 | 6_2:+60643215 | None:intergenic |
GAGAGAACAATGCTTGCTTG+AGG | 0.603868 | 6_2:+60644488 | None:intergenic |
ATGTCTGTAACCAATGTCAA+GGG | 0.608239 | 6_2:+60644675 | None:intergenic |
AGAAGCTATAGGCATGGCTG+TGG | 0.608547 | 6_2:-60648491 | Msa0922340:CDS |
TTGGGGTTCAGGAGCCGTCG+TGG | 0.612250 | 6_2:-60646236 | Msa0922340:intron |
AAGTGGTTTGTGGTGATATG+TGG | 0.614573 | 6_2:+60648773 | None:intergenic |
AAGGAATTCATGTGTGTGCA+TGG | 0.617297 | 6_2:-60643955 | Msa0922340:CDS |
TTTGACACAGCTTGGCCAAG+AGG | 0.617936 | 6_2:+60644619 | None:intergenic |
AATACTTTGTATGCTCCCAA+TGG | 0.618795 | 6_2:+60643929 | None:intergenic |
TCCTTGGAAGATTTGTGGGA+TGG | 0.619696 | 6_2:-60643241 | Msa0922340:CDS |
TCTAGCTACTCAAATTCACA+TGG | 0.620367 | 6_2:+60642920 | None:intergenic |
TGGATGCTATGGAAACAACT+TGG | 0.620963 | 6_2:-60643002 | Msa0922340:three_prime_UTR |
GCCTTGTAAAGTCTGCATTG+TGG | 0.628195 | 6_2:+60643298 | None:intergenic |
TATGCATGATTGGCAATTGG+TGG | 0.628915 | 6_2:+60648735 | None:intergenic |
TATTCTTCAGGAAATTGCTG+AGG | 0.632039 | 6_2:-60643876 | Msa0922340:CDS |
AACAGAAGAAGCTATAGGCA+TGG | 0.636370 | 6_2:-60648497 | Msa0922340:CDS |
GAGCCTTGAGAACAAGGTCA+TGG | 0.636860 | 6_2:+60644521 | None:intergenic |
CTAAGATGGATACATGAGCA+AGG | 0.646695 | 6_2:-60643427 | Msa0922340:CDS |
AAGAATTTGATTCTCCACGA+CGG | 0.647872 | 6_2:+60646222 | None:intergenic |
TTGGCAGCAAGGAAAACTCA+GGG | 0.649378 | 6_2:-60643993 | Msa0922340:CDS |
TAAGATGGATACATGAGCAA+GGG | 0.664827 | 6_2:-60643426 | Msa0922340:CDS |
CRISPR-GE
badsite warning | sgRNA_sequence | Strand | Position | Region | GC_content |
---|---|---|---|---|---|
!! | AATAATTCTAATATTTGATT+TGG | - | chr6_2:60644973-60644992 | Msa0922340:intron | 10.0% |
!! | TTATAAAACATGTTTATAAA+TGG | - | chr6_2:60645465-60645484 | Msa0922340:intron | 10.0% |
!! | AGAAAAAATGTATATTTGAA+AGG | + | chr6_2:60643411-60643430 | None:intergenic | 15.0% |
!!! | AATATACATTTTTTCTCTAT+TGG | - | chr6_2:60643415-60643434 | Msa0922340:CDS | 15.0% |
!! | GTCATATATTTATTTGAAAA+CGG | + | chr6_2:60643559-60643578 | None:intergenic | 15.0% |
!! | ATAGTAAATGGTTAAATATA+GGG | - | chr6_2:60643727-60643746 | Msa0922340:intron | 15.0% |
!!! | ATTTTGTGAATATTTCAAAA+TGG | + | chr6_2:60643783-60643802 | None:intergenic | 15.0% |
!!! | AACTTTTTTACAATAACTAA+AGG | - | chr6_2:60643967-60643986 | Msa0922340:CDS | 15.0% |
!! | AACATAAAATCTTATATCAA+AGG | - | chr6_2:60644184-60644203 | Msa0922340:intron | 15.0% |
!! | AGACAAAAAAAGTAAATTAA+CGG | - | chr6_2:60644369-60644388 | Msa0922340:intron | 15.0% |
!!! | AAGATATTTTTTTTATTCTC+AGG | - | chr6_2:60646035-60646054 | Msa0922340:intron | 15.0% |
!! | GTTATTTAGTATTTATATAC+TGG | + | chr6_2:60646322-60646341 | None:intergenic | 15.0% |
!! | AAAATCTAGAAATATTTGAT+TGG | - | chr6_2:60648254-60648273 | Msa0922340:intron | 15.0% |
!! | GAATGAGTTTATAGATTTAT+AGG | + | chr6_2:60643278-60643297 | None:intergenic | 20.0% |
!!! | AGATCAATTCTAAAGTAAAA+AGG | + | chr6_2:60643471-60643490 | None:intergenic | 20.0% |
!! | ATATTAAGTGGATAAACTTA+GGG | - | chr6_2:60643662-60643681 | Msa0922340:intron | 20.0% |
!! | ACAGTAAGTTGTTAAAATAT+GGG | - | chr6_2:60643694-60643713 | Msa0922340:intron | 20.0% |
!! | GATAGTAAATGGTTAAATAT+AGG | - | chr6_2:60643726-60643745 | Msa0922340:intron | 20.0% |
!!! | TTTGAAATATTCACAAAATC+TGG | - | chr6_2:60643784-60643803 | Msa0922340:intron | 20.0% |
!! | TTGAAATATTCACAAAATCT+GGG | - | chr6_2:60643785-60643804 | Msa0922340:intron | 20.0% |
!!! | AAAAAGTTGTTTTAAATCCA+AGG | + | chr6_2:60643955-60643974 | None:intergenic | 20.0% |
!! | TGAAATTTGGTATATTTACA+TGG | - | chr6_2:60643990-60644009 | Msa0922340:CDS | 20.0% |
!! | TATAAGAAAGTTCTTTCTAT+TGG | - | chr6_2:60644089-60644108 | Msa0922340:intron | 20.0% |
!! | GACAAAAAAAGTAAATTAAC+GGG | - | chr6_2:60644370-60644389 | Msa0922340:intron | 20.0% |
!!! | CTATTTTTTAACTGATAACT+AGG | + | chr6_2:60645026-60645045 | None:intergenic | 20.0% |
!! | TCAGTTAAAAAATAGCAATT+TGG | - | chr6_2:60645031-60645050 | Msa0922340:intron | 20.0% |
!!! | CACAAATTTGCTATTTTTTT+AGG | + | chr6_2:60645062-60645081 | None:intergenic | 20.0% |
!!! | TTTTTTTGTAAAGATAGTTC+CGG | - | chr6_2:60645132-60645151 | Msa0922340:intron | 20.0% |
!!! | GTTAACTTCAATTCTTTTTT+AGG | - | chr6_2:60645252-60645271 | Msa0922340:intron | 20.0% |
!!! | AAAATATCTTTATTTGGAGT+TGG | + | chr6_2:60646025-60646044 | None:intergenic | 20.0% |
!!! | TTATGGTTTTATTGACTATT+TGG | + | chr6_2:60646608-60646627 | None:intergenic | 20.0% |
!! | TTTATTTATGCAACACATTA+AGG | - | chr6_2:60646695-60646714 | Msa0922340:intron | 20.0% |
!!! | AATTCTGTATCATTTTTTGT+TGG | - | chr6_2:60647185-60647204 | Msa0922340:intron | 20.0% |
!!! | ATTTTTTGTTGGAATTGTTT+AGG | - | chr6_2:60647196-60647215 | Msa0922340:intron | 20.0% |
!! | TCATTAACCAATCAATATTA+TGG | - | chr6_2:60647505-60647524 | Msa0922340:intron | 20.0% |
!!! | GAAATGTTTTTATCTGAAAA+TGG | - | chr6_2:60648340-60648359 | Msa0922340:intron | 20.0% |
!! | TAAACAAATTACAATGATCA+AGG | + | chr6_2:60648760-60648779 | None:intergenic | 20.0% |
! | CTTTACAAAATATGCATGAT+TGG | + | chr6_2:60642892-60642911 | None:intergenic | 25.0% |
! | TGAAAGGAAAAAAAACTACA+GGG | + | chr6_2:60643395-60643414 | None:intergenic | 25.0% |
! | TTGAAAGGAAAAAAAACTAC+AGG | + | chr6_2:60643396-60643415 | None:intergenic | 25.0% |
! | GAATTGATCTCTATAATATG+CGG | - | chr6_2:60643481-60643500 | Msa0922340:intron | 25.0% |
! | AGGACTAAATTGATATTAAG+TGG | - | chr6_2:60643650-60643669 | Msa0922340:intron | 25.0% |
! | GATATTAAGTGGATAAACTT+AGG | - | chr6_2:60643661-60643680 | Msa0922340:intron | 25.0% |
! | GACAGTAAGTTGTTAAAATA+TGG | - | chr6_2:60643693-60643712 | Msa0922340:intron | 25.0% |
! | TCAAGAGTTTAATAGAATCA+AGG | - | chr6_2:60643756-60643775 | Msa0922340:intron | 25.0% |
! | TATTACGCAAATATTACATG+CGG | - | chr6_2:60643871-60643890 | Msa0922340:CDS | 25.0% |
!! | TTCAAAGGATCAAATTTTAC+AGG | - | chr6_2:60643903-60643922 | Msa0922340:CDS | 25.0% |
!! | CAAAAAAGTGTATATTTCCT+TGG | - | chr6_2:60643935-60643954 | Msa0922340:CDS | 25.0% |
! | CAATAACTAAAGGTGAAATT+TGG | - | chr6_2:60643977-60643996 | Msa0922340:CDS | 25.0% |
! | CTTATACAAACATTGAAAAC+AGG | + | chr6_2:60644075-60644094 | None:intergenic | 25.0% |
! | TCTTGTACAAATCCTTAAAA+AGG | - | chr6_2:60644117-60644136 | Msa0922340:intron | 25.0% |
! | CTTGTACAAATCCTTAAAAA+GGG | - | chr6_2:60644118-60644137 | Msa0922340:intron | 25.0% |
! | TTGTACAAATCCTTAAAAAG+GGG | - | chr6_2:60644119-60644138 | Msa0922340:intron | 25.0% |
!! | TTCAATTTTTCCCCTTTTTA+AGG | + | chr6_2:60644132-60644151 | None:intergenic | 25.0% |
! | AAGGATTTAAGGAACAATAA+TGG | + | chr6_2:60644421-60644440 | None:intergenic | 25.0% |
! | TCTATTGGTATATGCAATTA+TGG | - | chr6_2:60644636-60644655 | Msa0922340:CDS | 25.0% |
!! | AACTTTTTGAATTCGTGTTT+AGG | - | chr6_2:60644773-60644792 | Msa0922340:intron | 25.0% |
! | AATAGCAAATTTGTGCAATT+CGG | - | chr6_2:60645067-60645086 | Msa0922340:intron | 25.0% |
! | TTTAATGGTTCATATGAAAC+TGG | + | chr6_2:60645194-60645213 | None:intergenic | 25.0% |
! | CATATGAACCATTAAAAGTT+CGG | - | chr6_2:60645198-60645217 | Msa0922340:intron | 25.0% |
!! | AAATTGAACCGAACTTTTAA+TGG | + | chr6_2:60645209-60645228 | None:intergenic | 25.0% |
!! | ATTTTATCGAACTGTTATGA+CGG | - | chr6_2:60645225-60645244 | Msa0922340:intron | 25.0% |
!!! | AACTTCAATTCTTTTTTAGG+TGG | - | chr6_2:60645255-60645274 | Msa0922340:intron | 25.0% |
! | TATTAGTTCATGTCATATGA+AGG | - | chr6_2:60645574-60645593 | Msa0922340:intron | 25.0% |
! | CACATTATGATTTCAATTTC+AGG | - | chr6_2:60645598-60645617 | Msa0922340:intron | 25.0% |
! | GCTCAAAATCAAATATTTCA+AGG | + | chr6_2:60645700-60645719 | None:intergenic | 25.0% |
!! | TATTTTCCTTCAACATAGTT+AGG | + | chr6_2:60645863-60645882 | None:intergenic | 25.0% |
! | AAGAGATTTAAACATCATTC+CGG | - | chr6_2:60646235-60646254 | Msa0922340:intron | 25.0% |
!!! | TATCGTTCACAAATTTTTTG+AGG | + | chr6_2:60646298-60646317 | None:intergenic | 25.0% |
!! | AAATGCTAATCAAGTTTTCT+AGG | - | chr6_2:60646360-60646379 | Msa0922340:intron | 25.0% |
!!! | CTAGGTTACTATTTGTTTTT+TGG | - | chr6_2:60646378-60646397 | Msa0922340:intron | 25.0% |
!!! | TTGTTTTTTGGAAACAAGAA+AGG | - | chr6_2:60646390-60646409 | Msa0922340:intron | 25.0% |
! | AGGAATACACAATATTTATG+TGG | - | chr6_2:60646410-60646429 | Msa0922340:intron | 25.0% |
! | ACATTATTAAGAACATGATG+TGG | - | chr6_2:60646455-60646474 | Msa0922340:intron | 25.0% |
!!! | TGTGTTTTTATTAAGGTTAG+TGG | + | chr6_2:60646506-60646525 | None:intergenic | 25.0% |
! | TGAACTAACACTAGAAAATA+TGG | - | chr6_2:60646796-60646815 | Msa0922340:intron | 25.0% |
!! | ATATTGATTGGTTAATGACT+CGG | + | chr6_2:60647503-60647522 | None:intergenic | 25.0% |
! | GTATTCTCCATAATATTGAT+TGG | + | chr6_2:60647515-60647534 | None:intergenic | 25.0% |
!!! | ATGGAGAATACAAAGTATTT+TGG | - | chr6_2:60647524-60647543 | Msa0922340:intron | 25.0% |
!!! | TGGAGAATACAAAGTATTTT+GGG | - | chr6_2:60647525-60647544 | Msa0922340:intron | 25.0% |
! | TGTTATGAAATTCACTCAAT+TGG | - | chr6_2:60647556-60647575 | Msa0922340:intron | 25.0% |
!!! | GGTTTTAGAACAATTTGTTT+AGG | + | chr6_2:60647843-60647862 | None:intergenic | 25.0% |
! | AACCTTAAAATGCTAGATAA+AGG | - | chr6_2:60647859-60647878 | Msa0922340:intron | 25.0% |
! | ACCTTAAAATGCTAGATAAA+GGG | - | chr6_2:60647860-60647879 | Msa0922340:intron | 25.0% |
!! | ACTTATGCATAAGTACTTTT+AGG | - | chr6_2:60648081-60648100 | Msa0922340:intron | 25.0% |
!!! | TGATCATGAGTTGATATATA+TGG | - | chr6_2:60648523-60648542 | Msa0922340:CDS | 25.0% |
CATCTATATAAAGTGGTTTG+TGG | + | chr6_2:60642854-60642873 | None:intergenic | 30.0% | |
AAATATGCATGATTGGCAAT+TGG | + | chr6_2:60642885-60642904 | None:intergenic | 30.0% | |
AACAAGAACAAAGAAAAGCA+TGG | - | chr6_2:60642928-60642947 | Msa0922340:three_prime_UTR | 30.0% | |
TTTGTTGATGCAATCAAAGT+TGG | - | chr6_2:60643061-60643080 | Msa0922340:three_prime_UTR | 30.0% | |
GGTTATAGCTTACTTTAATG+TGG | + | chr6_2:60643257-60643276 | None:intergenic | 30.0% | |
TACAATGTCAGAGACTAATT+TGG | + | chr6_2:60643534-60643553 | None:intergenic | 30.0% | |
! | AAATTAGTCTCTGACATTGT+AGG | - | chr6_2:60643533-60643552 | Msa0922340:intron | 30.0% |
AGTCTTTCAAAGATTATGTG+AGG | - | chr6_2:60643630-60643649 | Msa0922340:intron | 30.0% | |
AGTTGTTAAAATATGGGAAC+TGG | - | chr6_2:60643700-60643719 | Msa0922340:intron | 30.0% | |
!! | GACATCGATTTAAAACAATG+TGG | + | chr6_2:60644053-60644072 | None:intergenic | 30.0% |
AGGGGAAAAATTGAAATCAA+TGG | - | chr6_2:60644137-60644156 | Msa0922340:intron | 30.0% | |
GGGGAAAAATTGAAATCAAT+GGG | - | chr6_2:60644138-60644157 | Msa0922340:intron | 30.0% | |
GACAACTTTGTAAACAAATG+TGG | - | chr6_2:60644160-60644179 | Msa0922340:intron | 30.0% | |
! | GATTTTACCAAACAATTCGT+CGG | + | chr6_2:60644249-60644268 | None:intergenic | 30.0% |
! | GGTTTCTTTTCCCTAAAAAT+TGG | - | chr6_2:60644339-60644358 | Msa0922340:intron | 30.0% |
! | TTCTTTTCCCTAAAAATTGG+AGG | - | chr6_2:60644342-60644361 | Msa0922340:intron | 30.0% |
! | TCTCAATCCTCCAATTTTTA+GGG | + | chr6_2:60644352-60644371 | None:intergenic | 30.0% |
AGAAGTTACACAAGGATTTA+AGG | + | chr6_2:60644432-60644451 | None:intergenic | 30.0% | |
TTGTACATAGAAGTTACACA+AGG | + | chr6_2:60644440-60644459 | None:intergenic | 30.0% | |
! | TACAATGTTGTTTAGAAAGC+TGG | - | chr6_2:60644455-60644474 | Msa0922340:intron | 30.0% |
! | ACAATGTTGTTTAGAAAGCT+GGG | - | chr6_2:60644456-60644475 | Msa0922340:intron | 30.0% |
TGGATCTTTATCTGATTCAT+TGG | - | chr6_2:60644490-60644509 | Msa0922340:CDS | 30.0% | |
CTTCTTTGGTAAATATGACA+GGG | + | chr6_2:60644545-60644564 | None:intergenic | 30.0% | |
TCTTCTTTGGTAAATATGAC+AGG | + | chr6_2:60644546-60644565 | None:intergenic | 30.0% | |
AAAGGGAAGTAAATCTTCTT+TGG | + | chr6_2:60644559-60644578 | None:intergenic | 30.0% | |
TTACTTCCCTTTGATATAGA+AGG | - | chr6_2:60644567-60644586 | Msa0922340:CDS | 30.0% | |
TACTTCCCTTTGATATAGAA+GGG | - | chr6_2:60644568-60644587 | Msa0922340:CDS | 30.0% | |
!! | ATGGAAGAGTGTTATAAGTT+AGG | - | chr6_2:60644603-60644622 | Msa0922340:CDS | 30.0% |
!!! | CAAGAGTTTAGTCAGTTTTT+TGG | + | chr6_2:60644664-60644683 | None:intergenic | 30.0% |
CAAAAAACTGACTAAACTCT+TGG | - | chr6_2:60644662-60644681 | Msa0922340:CDS | 30.0% | |
TTCGTACACTGTTAGTAAAA+TGG | - | chr6_2:60644744-60644763 | Msa0922340:CDS | 30.0% | |
GTGAACTATTCATCACAATT+TGG | - | chr6_2:60644910-60644929 | Msa0922340:intron | 30.0% | |
GGTTATGTAGATGATAAAAG+TGG | - | chr6_2:60645486-60645505 | Msa0922340:intron | 30.0% | |
! | AGAAATGTCGTAACTTGTAA+GGG | + | chr6_2:60645528-60645547 | None:intergenic | 30.0% |
! | AATGGCTAAAAGCTTTAACA+AGG | - | chr6_2:60645658-60645677 | Msa0922340:intron | 30.0% |
TCACATTCTTGTTCAATTCA+AGG | + | chr6_2:60645951-60645970 | None:intergenic | 30.0% | |
AGAGATTTAAACATCATTCC+GGG | - | chr6_2:60646236-60646255 | Msa0922340:intron | 30.0% | |
!! | GGTCACTTGTGTTTTTATTA+AGG | + | chr6_2:60646513-60646532 | None:intergenic | 30.0% |
! | TGCCTTACATTTTTCATATC+AGG | - | chr6_2:60646559-60646578 | Msa0922340:intron | 30.0% |
! | GCCTTACATTTTTCATATCA+GGG | - | chr6_2:60646560-60646579 | Msa0922340:intron | 30.0% |
TCCCTGATATGAAAAATGTA+AGG | + | chr6_2:60646564-60646583 | None:intergenic | 30.0% | |
! | ATGCAGGAAAGCTTTTATTA+TGG | + | chr6_2:60646625-60646644 | None:intergenic | 30.0% |
ATAAAAGCTTTCCTGCATAT+TGG | - | chr6_2:60646627-60646646 | Msa0922340:intron | 30.0% | |
!! | CCATTGATTCTTAGATATGA+TGG | + | chr6_2:60646771-60646790 | None:intergenic | 30.0% |
CCATCATATCTAAGAATCAA+TGG | - | chr6_2:60646768-60646787 | Msa0922340:intron | 30.0% | |
ATGAGGTGATACTAAATTCA+GGG | - | chr6_2:60646834-60646853 | Msa0922340:intron | 30.0% | |
TTTGATACAGCTTCTATCTA+TGG | - | chr6_2:60646962-60646981 | Msa0922340:intron | 30.0% | |
! | TTTTCATTACTTCCAAGCTA+TGG | - | chr6_2:60647056-60647075 | Msa0922340:intron | 30.0% |
!! | CTCTCGAACTTTTTCTTTTA+AGG | - | chr6_2:60647144-60647163 | Msa0922340:intron | 30.0% |
AGATTGAAAGAAGATGTTGA+AGG | - | chr6_2:60647267-60647286 | Msa0922340:intron | 30.0% | |
ATGGAAGATTGTTACAGATT+AGG | - | chr6_2:60647348-60647367 | Msa0922340:intron | 30.0% | |
GTTACTAACACCAATAGATT+TGG | + | chr6_2:60647379-60647398 | None:intergenic | 30.0% | |
!! | TCTATTGGTGTTAGTAACTT+TGG | - | chr6_2:60647381-60647400 | Msa0922340:intron | 30.0% |
! | TGATTTTGTCCAATTCTTCT+TGG | + | chr6_2:60648288-60648307 | None:intergenic | 30.0% |
TTCAGCAATGAATGAGATAA+TGG | + | chr6_2:60648498-60648517 | None:intergenic | 30.0% | |
ATAAATGATGAAGAGGTTGA+TGG | + | chr6_2:60648648-60648667 | None:intergenic | 30.0% | |
AACCTCTTCATCATTTATTC+TGG | - | chr6_2:60648650-60648669 | Msa0922340:CDS | 30.0% | |
AACCAGAATAAATGATGAAG+AGG | + | chr6_2:60648655-60648674 | None:intergenic | 30.0% | |
GGCACTTCATCTATATAAAG+TGG | + | chr6_2:60642861-60642880 | None:intergenic | 35.0% | |
AAAATGCCAGTCATAGGAAT+GGG | - | chr6_2:60642992-60643011 | Msa0922340:three_prime_UTR | 35.0% | |
GAAGCAAGAACATCATTTGA+TGG | + | chr6_2:60643037-60643056 | None:intergenic | 35.0% | |
TATGGAACAGAAGAAGCTAT+AGG | - | chr6_2:60643112-60643131 | Msa0922340:three_prime_UTR | 35.0% | |
! | TTTTCATCACTTCAAAGCCA+TGG | - | chr6_2:60643188-60643207 | Msa0922340:three_prime_UTR | 35.0% |
! | TTTAATGTGGTCTTAAGAGC+TGG | + | chr6_2:60643244-60643263 | None:intergenic | 35.0% |
AATGTCAGAGACTAATTTGG+TGG | + | chr6_2:60643531-60643550 | None:intergenic | 35.0% | |
! | GGAACTGGATTGATAGTAAA+TGG | - | chr6_2:60643715-60643734 | Msa0922340:intron | 35.0% |
AGTCCTTGTATAGTCTGTAT+GGG | + | chr6_2:60643843-60643862 | None:intergenic | 35.0% | |
TAGTCCTTGTATAGTCTGTA+TGG | + | chr6_2:60643844-60643863 | None:intergenic | 35.0% | |
TATCAAAGGTTTGTGACCAA+TGG | - | chr6_2:60644198-60644217 | Msa0922340:intron | 35.0% | |
! | AATCCGAGTTCAAACTTGTT+TGG | - | chr6_2:60644265-60644284 | Msa0922340:intron | 35.0% |
GTTCCAAACAAGTTTGAACT+CGG | + | chr6_2:60644271-60644290 | None:intergenic | 35.0% | |
GTAATTCAGATTTCCGTCAA+GGG | + | chr6_2:60644316-60644335 | None:intergenic | 35.0% | |
! | GTCTCAATCCTCCAATTTTT+AGG | + | chr6_2:60644353-60644372 | None:intergenic | 35.0% |
CATGTCCCTTCTATATCAAA+GGG | + | chr6_2:60644576-60644595 | None:intergenic | 35.0% | |
TTAGGCTTAGCAAAGTCTAT+TGG | - | chr6_2:60644621-60644640 | Msa0922340:CDS | 35.0% | |
AGAATAAAGTTGAGCTGTGA+CGG | - | chr6_2:60644841-60644860 | Msa0922340:intron | 35.0% | |
CGGTTTACAAAGAATCAGTT+TGG | - | chr6_2:60645087-60645106 | Msa0922340:intron | 35.0% | |
TTGTAAAGATAGTTCCGGTT+CGG | - | chr6_2:60645137-60645156 | Msa0922340:intron | 35.0% | |
!!! | TGTTTAGTGTACTGGTTTTG+TGG | + | chr6_2:60645165-60645184 | None:intergenic | 35.0% |
GGTATAACTGTTTAGTGTAC+TGG | + | chr6_2:60645173-60645192 | None:intergenic | 35.0% | |
AAGGAATTCATGTTAGTGCT+TGG | - | chr6_2:60645329-60645348 | Msa0922340:intron | 35.0% | |
TTGGAGCATATAAGGTAACT+TGG | - | chr6_2:60645359-60645378 | Msa0922340:intron | 35.0% | |
TGGAGCATATAAGGTAACTT+GGG | - | chr6_2:60645360-60645379 | Msa0922340:intron | 35.0% | |
AAGAATTTGATTCTCCACGA+CGG | + | chr6_2:60645395-60645414 | None:intergenic | 35.0% | |
! | CAGAAATGTCGTAACTTGTA+AGG | + | chr6_2:60645529-60645548 | None:intergenic | 35.0% |
GATATGTGGCTATCTGAAAA+TGG | - | chr6_2:60645779-60645798 | Msa0922340:intron | 35.0% | |
CAAGACCTTAGAAGAACTTT+GGG | - | chr6_2:60645808-60645827 | Msa0922340:intron | 35.0% | |
TCAACATAGTTAGGACTATG+AGG | + | chr6_2:60645854-60645873 | None:intergenic | 35.0% | |
CATAGTCCTAACTATGTTGA+AGG | - | chr6_2:60645854-60645873 | Msa0922340:intron | 35.0% | |
! | AAGATGATTGTCGTGTTTTC+TGG | - | chr6_2:60646069-60646088 | Msa0922340:intron | 35.0% |
!! | TCGTGTTTTCTGGTATAAAC+TGG | - | chr6_2:60646079-60646098 | Msa0922340:intron | 35.0% |
!! | CGTGTTTTCTGGTATAAACT+GGG | - | chr6_2:60646080-60646099 | Msa0922340:intron | 35.0% |
!!! | TTTTTGAGGTGTTAAGCTAG+TGG | + | chr6_2:60646284-60646303 | None:intergenic | 35.0% |
! | TGTTTCAAGTGTTTGGTTGT+TGG | + | chr6_2:60646534-60646553 | None:intergenic | 35.0% |
! | CAGTGAATGTTTCAAGTGTT+TGG | + | chr6_2:60646541-60646560 | None:intergenic | 35.0% |
TAAAAGACAGTCCAATATGC+AGG | + | chr6_2:60646641-60646660 | None:intergenic | 35.0% | |
! | ACTGTCTTTTATGCAACCTA+AGG | - | chr6_2:60646650-60646669 | Msa0922340:intron | 35.0% |
TTATGCAACACATTAAGGTG+TGG | - | chr6_2:60646700-60646719 | Msa0922340:intron | 35.0% | |
ACTTTGAGCTTGATTCTTTG+AGG | + | chr6_2:60646742-60646761 | None:intergenic | 35.0% | |
GGAAGCAAATAAACTTCATG+AGG | - | chr6_2:60646817-60646836 | Msa0922340:intron | 35.0% | |
CATGAGGTGATACTAAATTC+AGG | - | chr6_2:60646833-60646852 | Msa0922340:intron | 35.0% | |
TGAGGTGATACTAAATTCAG+GGG | - | chr6_2:60646835-60646854 | Msa0922340:intron | 35.0% | |
! | TGAAGCTCTCACTTCAATTT+TGG | - | chr6_2:60646910-60646929 | Msa0922340:intron | 35.0% |
ATGTCTGTAACCAATGTCAA+GGG | + | chr6_2:60646942-60646961 | None:intergenic | 35.0% | |
AATGTCTGTAACCAATGTCA+AGG | + | chr6_2:60646943-60646962 | None:intergenic | 35.0% | |
TGGAATTGTTTAGGAATCTG+AGG | - | chr6_2:60647205-60647224 | Msa0922340:intron | 35.0% | |
! | ATTGTTTAGGAATCTGAGGT+TGG | - | chr6_2:60647209-60647228 | Msa0922340:intron | 35.0% |
ACATCTTCTTTCAATCTCAC+TGG | + | chr6_2:60647264-60647283 | None:intergenic | 35.0% | |
CATGTTCCTTTGATGTCAAA+GGG | + | chr6_2:60647321-60647340 | None:intergenic | 35.0% | |
TTAGGCTTAGCCAAATCTAT+TGG | - | chr6_2:60647366-60647385 | Msa0922340:intron | 35.0% | |
CTGATTAACTGCAGGAAAAA+TGG | + | chr6_2:60647442-60647461 | None:intergenic | 35.0% | |
! | CATTTTTCCTGCAGTTAATC+AGG | - | chr6_2:60647440-60647459 | Msa0922340:intron | 35.0% |
TCTTATACCTGATTAACTGC+AGG | + | chr6_2:60647450-60647469 | None:intergenic | 35.0% | |
! | TAATGACTCGGACAAATACT+CGG | + | chr6_2:60647491-60647510 | None:intergenic | 35.0% |
! | CATGTCGATTATCTCGATTT+AGG | - | chr6_2:60647582-60647601 | Msa0922340:intron | 35.0% |
AGGTAGAAATGAATCCATCT+TGG | - | chr6_2:60647602-60647621 | Msa0922340:intron | 35.0% | |
AGGGAATTCTGCATGAATAA+AGG | - | chr6_2:60647640-60647659 | Msa0922340:intron | 35.0% | |
AATACTTTGTATGCTCCCAA+TGG | + | chr6_2:60647688-60647707 | None:intergenic | 35.0% | |
!! | TGGGAGCATACAAAGTATTT+TGG | - | chr6_2:60647689-60647708 | Msa0922340:intron | 35.0% |
!! | GGGAGCATACAAAGTATTTT+GGG | - | chr6_2:60647690-60647709 | Msa0922340:intron | 35.0% |
!! | GGAGCATACAAAGTATTTTG+GGG | - | chr6_2:60647691-60647710 | Msa0922340:intron | 35.0% |
TATGGAGAATCCTATTCTTC+AGG | - | chr6_2:60647726-60647745 | Msa0922340:intron | 35.0% | |
TCAGCAATTTCCTGAAGAAT+AGG | + | chr6_2:60647739-60647758 | None:intergenic | 35.0% | |
TATTCTTCAGGAAATTGCTG+AGG | - | chr6_2:60647738-60647757 | Msa0922340:intron | 35.0% | |
! | GCCCTTTATCTAGCATTTTA+AGG | + | chr6_2:60647864-60647883 | None:intergenic | 35.0% |
TTGCACAAAGTAATCCAAAC+AGG | + | chr6_2:60647886-60647905 | None:intergenic | 35.0% | |
CTACGAACATAAATACTTCG+AGG | - | chr6_2:60647911-60647930 | Msa0922340:intron | 35.0% | |
TAAGATGGATACATGAGCAA+GGG | - | chr6_2:60648188-60648207 | Msa0922340:intron | 35.0% | |
TGAAAAGCTTCAACAAAGAG+AGG | - | chr6_2:60648224-60648243 | Msa0922340:intron | 35.0% | |
GAAACTGAACCAAGAAGAAT+TGG | - | chr6_2:60648276-60648295 | Msa0922340:intron | 35.0% | |
AAATCTTCCAAGGACTTGTA+AGG | + | chr6_2:60648367-60648386 | None:intergenic | 35.0% | |
CAATACAAGATCTTGCTCAA+GGG | + | chr6_2:60648402-60648421 | None:intergenic | 35.0% | |
TCAATACAAGATCTTGCTCA+AGG | + | chr6_2:60648403-60648422 | None:intergenic | 35.0% | |
GTGTTTGTGCAAGATAAAGA+AGG | + | chr6_2:60648464-60648483 | None:intergenic | 35.0% | |
!!! | TTCTGAAACTGTTTTTCACG+TGG | - | chr6_2:60648589-60648608 | Msa0922340:CDS | 35.0% |
TCTAGCTACTCAAATTCACA+TGG | + | chr6_2:60648697-60648716 | None:intergenic | 35.0% | |
TCCTAGATTTAGTCAAGTAG+AGG | - | chr6_2:60648719-60648738 | Msa0922340:five_prime_UTR | 35.0% | |
TCCTCTACTTGACTAAATCT+AGG | + | chr6_2:60648723-60648742 | None:intergenic | 35.0% | |
TTGTGGTGATATGTGGTGAT+GGG | + | chr6_2:60642837-60642856 | None:intergenic | 40.0% | |
TTTGTGGTGATATGTGGTGA+TGG | + | chr6_2:60642838-60642857 | None:intergenic | 40.0% | |
! | AAGTGGTTTGTGGTGATATG+TGG | + | chr6_2:60642844-60642863 | None:intergenic | 40.0% |
TATGCATGATTGGCAATTGG+TGG | + | chr6_2:60642882-60642901 | None:intergenic | 40.0% | |
! | AGAACAAAGAAAAGCATGGC+AGG | - | chr6_2:60642932-60642951 | Msa0922340:three_prime_UTR | 40.0% |
CCTGAGTTTAACAACACTTC+TGG | + | chr6_2:60642968-60642987 | None:intergenic | 40.0% | |
!! | CCAGAAGTGTTGTTAAACTC+AGG | - | chr6_2:60642965-60642984 | Msa0922340:three_prime_UTR | 40.0% |
CAAAATGCCAGTCATAGGAA+TGG | - | chr6_2:60642991-60643010 | Msa0922340:three_prime_UTR | 40.0% | |
AGACAGAAGCAGAATCGAAA+TGG | + | chr6_2:60643093-60643112 | None:intergenic | 40.0% | |
TTCGATTCTGCTTCTGTCTA+TGG | - | chr6_2:60643094-60643113 | Msa0922340:three_prime_UTR | 40.0% | |
AACAGAAGAAGCTATAGGCA+TGG | - | chr6_2:60643117-60643136 | Msa0922340:three_prime_UTR | 40.0% | |
!! | GTGGCAAAAGCTTTAGAAGA+AGG | - | chr6_2:60643142-60643161 | Msa0922340:three_prime_UTR | 40.0% |
TAATCTGCATCAGTGTTCCA+TGG | + | chr6_2:60643208-60643227 | None:intergenic | 40.0% | |
! | ATGCGGACTGCTAATTTCAA+AGG | - | chr6_2:60643888-60643907 | Msa0922340:CDS | 40.0% |
AACGATTTGAGCTCAACCAT+TGG | + | chr6_2:60644217-60644236 | None:intergenic | 40.0% | |
TGAGTATCCGACGAATTGTT+TGG | - | chr6_2:60644239-60644258 | Msa0922340:intron | 40.0% | |
TAGACTTTACCTACCCTTGA+CGG | - | chr6_2:60644300-60644319 | Msa0922340:intron | 40.0% | |
CGTAATTCAGATTTCCGTCA+AGG | + | chr6_2:60644317-60644336 | None:intergenic | 40.0% | |
GACGGAAATCTGAATTACGA+AGG | - | chr6_2:60644318-60644337 | Msa0922340:intron | 40.0% | |
GTTGTTTAGAAAGCTGGGAA+CGG | - | chr6_2:60644461-60644480 | Msa0922340:intron | 40.0% | |
AGATCATGTCTCAGTCTTAC+TGG | + | chr6_2:60644516-60644535 | None:intergenic | 40.0% | |
CCATGTCCCTTCTATATCAA+AGG | + | chr6_2:60644577-60644596 | None:intergenic | 40.0% | |
CCTTTGATATAGAAGGGACA+TGG | - | chr6_2:60644574-60644593 | Msa0922340:CDS | 40.0% | |
TACATACCTGATTCACTGCA+GGG | + | chr6_2:60644704-60644723 | None:intergenic | 40.0% | |
ATACATACCTGATTCACTGC+AGG | + | chr6_2:60644705-60644724 | None:intergenic | 40.0% | |
CGAACTAAACTGAATCAGTC+CGG | - | chr6_2:60644874-60644893 | Msa0922340:intron | 40.0% | |
! | GAAACTGAGGGAATTTTGCA+AGG | - | chr6_2:60645303-60645322 | Msa0922340:intron | 40.0% |
! | AGGGAATTTTGCAAGGAGAA+AGG | - | chr6_2:60645310-60645329 | Msa0922340:intron | 40.0% |
GGAGCATATAAGGTAACTTG+GGG | - | chr6_2:60645361-60645380 | Msa0922340:intron | 40.0% | |
TATAAGGTAACTTGGGGTTC+AGG | - | chr6_2:60645367-60645386 | Msa0922340:intron | 40.0% | |
AAGACATAGCAGCTGCAAAA+GGG | - | chr6_2:60645416-60645435 | Msa0922340:intron | 40.0% | |
!! | AATTTCAGGTTGCACTCAGA+TGG | - | chr6_2:60645612-60645631 | Msa0922340:intron | 40.0% |
!! | ATTTCAGGTTGCACTCAGAT+GGG | - | chr6_2:60645613-60645632 | Msa0922340:intron | 40.0% |
CCATTGCACTTGATCCTATT+TGG | + | chr6_2:60645643-60645662 | None:intergenic | 40.0% | |
CCAAATAGGATCAAGTGCAA+TGG | - | chr6_2:60645640-60645659 | Msa0922340:intron | 40.0% | |
GGCAATACTTAGGAGATATG+TGG | - | chr6_2:60645765-60645784 | Msa0922340:intron | 40.0% | |
GCAAGACCTTAGAAGAACTT+TGG | - | chr6_2:60645807-60645826 | Msa0922340:intron | 40.0% | |
! | ACCTTAGAAGAACTTTGGGA+TGG | - | chr6_2:60645812-60645831 | Msa0922340:intron | 40.0% |
TCCATCCCAAAGTTCTTCTA+AGG | + | chr6_2:60645816-60645835 | None:intergenic | 40.0% | |
TATGTGTAGCCTCAGTTATG+TGG | - | chr6_2:60645983-60646002 | Msa0922340:intron | 40.0% | |
TCACAAAGCAATCCTCTTGA+GGG | + | chr6_2:60646136-60646155 | None:intergenic | 40.0% | |
ATCACAAAGCAATCCTCTTG+AGG | + | chr6_2:60646137-60646156 | None:intergenic | 40.0% | |
! | AGTTTGACTTTGTGAGTTCC+CGG | + | chr6_2:60646257-60646276 | None:intergenic | 40.0% |
GGACCATGCATTTATCATCT+GGG | - | chr6_2:60646581-60646600 | Msa0922340:intron | 40.0% | |
GACCATGCATTTATCATCTG+GGG | - | chr6_2:60646582-60646601 | Msa0922340:intron | 40.0% | |
GGGGAAAAGATGCCAATAAT+AGG | - | chr6_2:60646854-60646873 | Msa0922340:intron | 40.0% | |
AAGATGCCAATAATAGGCCT+AGG | - | chr6_2:60646860-60646879 | Msa0922340:intron | 40.0% | |
AGAGCTTCATTTGATGGAAG+AGG | + | chr6_2:60646899-60646918 | None:intergenic | 40.0% | |
GAAGTGAGAGCTTCATTTGA+TGG | + | chr6_2:60646905-60646924 | None:intergenic | 40.0% | |
! | CTAAAGCTTTTGACACAGCT+TGG | + | chr6_2:60647006-60647025 | None:intergenic | 40.0% |
!! | GTGTCAAAAGCTTTAGAGCT+CGG | - | chr6_2:60647010-60647029 | Msa0922340:intron | 40.0% |
!! | TTTTGAGAGCCTTGAGAACA+AGG | + | chr6_2:60647102-60647121 | None:intergenic | 40.0% |
AGAGAACAATGCTTGCTTGA+GGG | + | chr6_2:60647128-60647147 | None:intergenic | 40.0% | |
TGGATCTCTACTTGATTCAC+TGG | - | chr6_2:60647238-60647257 | Msa0922340:intron | 40.0% | |
! | GTTGAAGGCTTTAACTTCAC+AGG | - | chr6_2:60647282-60647301 | Msa0922340:intron | 40.0% |
! | AGGCTTTAACTTCACAGGTA+AGG | - | chr6_2:60647287-60647306 | Msa0922340:intron | 40.0% |
GTGATTCCCTTTGACATCAA+AGG | - | chr6_2:60647312-60647331 | Msa0922340:intron | 40.0% | |
CCATGTTCCTTTGATGTCAA+AGG | + | chr6_2:60647322-60647341 | None:intergenic | 40.0% | |
CCTTTGACATCAAAGGAACA+TGG | - | chr6_2:60647319-60647338 | Msa0922340:intron | 40.0% | |
CAAAGGAACATGGAAAGCTA+TGG | - | chr6_2:60647329-60647348 | Msa0922340:intron | 40.0% | |
CAAAAAGCTTTCCGTACTCT+TGG | - | chr6_2:60647407-60647426 | Msa0922340:intron | 40.0% | |
! | GGTTGCATTTTCCAAGAGTA+CGG | + | chr6_2:60647421-60647440 | None:intergenic | 40.0% |
AAGGAATTCATGTGTGTGCA+TGG | - | chr6_2:60647659-60647678 | Msa0922340:intron | 40.0% | |
! | TTGGGGTTCTAATGCTGTTA+TGG | - | chr6_2:60647708-60647727 | Msa0922340:intron | 40.0% |
! | TAGAAAGAAGAGTGTAGCTC+AGG | - | chr6_2:60647762-60647781 | Msa0922340:intron | 40.0% |
TCTTGCAGATAGCACTAAGA+TGG | - | chr6_2:60648173-60648192 | Msa0922340:intron | 40.0% | |
CTAAGATGGATACATGAGCA+AGG | - | chr6_2:60648187-60648206 | Msa0922340:intron | 40.0% | |
TCCACAATGCAGACTTTACA+AGG | - | chr6_2:60648315-60648334 | Msa0922340:intron | 40.0% | |
AAATGGACCTTACAAGTCCT+TGG | - | chr6_2:60648357-60648376 | Msa0922340:intron | 40.0% | |
ACAAGTCCTTGGAAGATTTG+TGG | - | chr6_2:60648368-60648387 | Msa0922340:intron | 40.0% | |
CAAGTCCTTGGAAGATTTGT+GGG | - | chr6_2:60648369-60648388 | Msa0922340:intron | 40.0% | |
!! | TGAAACTGTTTTTCACGTGG+TGG | - | chr6_2:60648592-60648611 | Msa0922340:CDS | 40.0% |
TGGATGCTATGGAAACAACT+TGG | - | chr6_2:60648612-60648631 | Msa0922340:CDS | 40.0% | |
GGACACAAAATGCCAGTCAT+AGG | - | chr6_2:60642986-60643005 | Msa0922340:three_prime_UTR | 45.0% | |
GAAGTTCCCATTCCTATGAC+TGG | + | chr6_2:60643001-60643020 | None:intergenic | 45.0% | |
GCTCCCATACAGACTATACA+AGG | - | chr6_2:60643837-60643856 | Msa0922340:intron | 45.0% | |
TTCAGATTTCCGTCAAGGGT+AGG | + | chr6_2:60644312-60644331 | None:intergenic | 45.0% | |
AGAAGGGACATGGAAAGCAA+TGG | - | chr6_2:60644584-60644603 | Msa0922340:CDS | 45.0% | |
ACATACCTGATTCACTGCAG+GGG | + | chr6_2:60644703-60644722 | None:intergenic | 45.0% | |
! | GTTCACGAACTGAGTTGAAC+CGG | + | chr6_2:60644896-60644915 | None:intergenic | 45.0% |
AGGTGGAGATGAATCCTTCT+TGG | - | chr6_2:60645272-60645291 | Msa0922340:intron | 45.0% | |
TGAATCCTTCTTGGCAGCAA+TGG | - | chr6_2:60645281-60645300 | Msa0922340:intron | 45.0% | |
AGTTTCCATTGCTGCCAAGA+AGG | + | chr6_2:60645289-60645308 | None:intergenic | 45.0% | |
TTGGCAGCAATGGAAACTGA+GGG | - | chr6_2:60645291-60645310 | Msa0922340:intron | 45.0% | |
GTCAGCTCTTGGAGCATATA+AGG | - | chr6_2:60645351-60645370 | Msa0922340:intron | 45.0% | |
CAAGACATAGCAGCTGCAAA+AGG | - | chr6_2:60645415-60645434 | Msa0922340:intron | 45.0% | |
AAAAGGGAAGACTACAGCTC+AGG | - | chr6_2:60645432-60645451 | Msa0922340:intron | 45.0% | |
CTCAGATGGGTGTACCAAAT+AGG | - | chr6_2:60645626-60645645 | Msa0922340:intron | 45.0% | |
TTAAGCAGATTCCACAGCGA+AGG | - | chr6_2:60645744-60645763 | Msa0922340:intron | 45.0% | |
TATGCAGAGCCACATAACTG+AGG | + | chr6_2:60645995-60646014 | None:intergenic | 45.0% | |
GTCTTTGCAGTTGCGATTAG+AGG | + | chr6_2:60646109-60646128 | None:intergenic | 45.0% | |
GCAAAGACTAATCCCTCAAG+AGG | - | chr6_2:60646121-60646140 | Msa0922340:intron | 45.0% | |
GGGACCATGCATTTATCATC+TGG | - | chr6_2:60646580-60646599 | Msa0922340:intron | 45.0% | |
! | GATGACACGTTTTACGCCTT+AGG | + | chr6_2:60646669-60646688 | None:intergenic | 45.0% |
!! | GAGCTTGATTCTTTGAGGTG+TGG | + | chr6_2:60646737-60646756 | None:intergenic | 45.0% |
GCAGTTCCTAGGCCTATTAT+TGG | + | chr6_2:60646869-60646888 | None:intergenic | 45.0% | |
! | TTGGTTGATGCCCTTGACAT+TGG | - | chr6_2:60646929-60646948 | Msa0922340:intron | 45.0% |
! | TATGGTACCGAAGAACCTCT+TGG | - | chr6_2:60646980-60646999 | Msa0922340:intron | 45.0% |
TCACCATGACCTTGTTCTCA+AGG | - | chr6_2:60647090-60647109 | Msa0922340:intron | 45.0% | |
GAGAGAACAATGCTTGCTTG+AGG | + | chr6_2:60647129-60647148 | None:intergenic | 45.0% | |
! | GAATCTGAGGTTGGAGTATG+TGG | - | chr6_2:60647218-60647237 | Msa0922340:intron | 45.0% |
ATGAATCCATCTTGGCAGCA+AGG | - | chr6_2:60647610-60647629 | Msa0922340:intron | 45.0% | |
! | AGTTTTCCTTGCTGCCAAGA+TGG | + | chr6_2:60647619-60647638 | None:intergenic | 45.0% |
TTGGCAGCAAGGAAAACTCA+GGG | - | chr6_2:60647621-60647640 | Msa0922340:intron | 45.0% | |
TGCTAGATAAAGGGCCTGTT+TGG | - | chr6_2:60647869-60647888 | Msa0922340:intron | 45.0% | |
GCCTTGTAAAGTCTGCATTG+TGG | + | chr6_2:60648319-60648338 | None:intergenic | 45.0% | |
TCCTTGGAAGATTTGTGGGA+TGG | - | chr6_2:60648373-60648392 | Msa0922340:CDS | 45.0% | |
ACCATCCCACAAATCTTCCA+AGG | + | chr6_2:60648377-60648396 | None:intergenic | 45.0% | |
!!! | TTTTCACGTGGTGGATGCTA+TGG | - | chr6_2:60648601-60648620 | Msa0922340:CDS | 45.0% |
!! | ATAAAAAAAATATCTTTATT+TGG | + | chr6_2:60646031-60646050 | None:intergenic | 5.0% |
!!! | TAATTTTTTTAACAAAATAA+AGG | - | chr6_2:60646183-60646202 | Msa0922340:CDS | 5.0% |
AGAAGCTATAGGCATGGCTG+TGG | - | chr6_2:60643123-60643142 | Msa0922340:three_prime_UTR | 50.0% | |
AAAGCTGGGAACGGAGTATG+TGG | - | chr6_2:60644470-60644489 | Msa0922340:CDS | 50.0% | |
!!! | CTGGTTTTGTGGTTCCGAAC+CGG | + | chr6_2:60645154-60645173 | None:intergenic | 50.0% |
CTTGGCAGCAATGGAAACTG+AGG | - | chr6_2:60645290-60645309 | Msa0922340:intron | 50.0% | |
GTTAGTGCTTGGTCAGCTCT+TGG | - | chr6_2:60645340-60645359 | Msa0922340:intron | 50.0% | |
! | CCTAAGTATTGCCTTCGCTG+TGG | + | chr6_2:60645758-60645777 | None:intergenic | 50.0% |
CCACAGCGAAGGCAATACTT+AGG | - | chr6_2:60645755-60645774 | Msa0922340:intron | 50.0% | |
GGCCCCAGATGATAAATGCA+TGG | + | chr6_2:60646587-60646606 | None:intergenic | 50.0% | |
GAGGAGTTGTAGCAGTTCCT+AGG | + | chr6_2:60646880-60646899 | None:intergenic | 50.0% | |
AGCTTGGCCAAGAGGTTCTT+CGG | + | chr6_2:60646990-60647009 | None:intergenic | 50.0% | |
TTTGACACAGCTTGGCCAAG+AGG | + | chr6_2:60646998-60647017 | None:intergenic | 50.0% | |
AGCATCAGTGCACCATAGCT+TGG | + | chr6_2:60647071-60647090 | None:intergenic | 50.0% | |
GAGCCTTGAGAACAAGGTCA+TGG | + | chr6_2:60647096-60647115 | None:intergenic | 50.0% | |
GAACAATGCTTGCTTGAGGG+TGG | + | chr6_2:60647125-60647144 | None:intergenic | 50.0% | |
CTTGGCAGCAAGGAAAACTC+AGG | - | chr6_2:60647620-60647639 | Msa0922340:intron | 50.0% | |
TGTGTGTGCATGGTCACCAT+TGG | - | chr6_2:60647669-60647688 | Msa0922340:intron | 50.0% | |
GTGTGTGCATGGTCACCATT+GGG | - | chr6_2:60647670-60647689 | Msa0922340:intron | 50.0% | |
GGCAGATTACGAGAGCTCAT+TGG | - | chr6_2:60647932-60647951 | Msa0922340:intron | 50.0% | |
CTGATTCACTGCAGGGGTGA+TGG | + | chr6_2:60644697-60644716 | None:intergenic | 55.0% | |
CATCACCCCTGCAGTGAATC+AGG | - | chr6_2:60644695-60644714 | Msa0922340:CDS | 55.0% | |
TTGGGGTTCAGGAGCCGTCG+TGG | - | chr6_2:60645378-60645397 | Msa0922340:intron | 65.0% |
Chromosome | Type | Strat | End | Strand | Name |
---|---|---|---|---|---|
chr6_2 | gene | 60642823 | 60648813 | 60642823 | ID=Msa0922340;Name=Msa0922340 |
chr6_2 | mRNA | 60642823 | 60648813 | 60642823 | ID=Msa0922340-mRNA-1;Parent=Msa0922340;Name=Msa0922340-mRNA-1;_AED=0.27;_eAED=0.27;_QI=124|0.25|0.6|1|0.5|0.6|5|408|366 |
chr6_2 | exon | 60642823 | 60643455 | 60642823 | ID=Msa0922340-mRNA-1:exon:9338;Parent=Msa0922340-mRNA-1 |
chr6_2 | exon | 60643853 | 60644032 | 60643853 | ID=Msa0922340-mRNA-1:exon:9337;Parent=Msa0922340-mRNA-1 |
chr6_2 | exon | 60644468 | 60644781 | 60644468 | ID=Msa0922340-mRNA-1:exon:9336;Parent=Msa0922340-mRNA-1 |
chr6_2 | exon | 60646183 | 60646247 | 60646183 | ID=Msa0922340-mRNA-1:exon:9335;Parent=Msa0922340-mRNA-1 |
chr6_2 | exon | 60648373 | 60648813 | 60648373 | ID=Msa0922340-mRNA-1:exon:9334;Parent=Msa0922340-mRNA-1 |
chr6_2 | five_prime_UTR | 60648690 | 60648813 | 60648690 | ID=Msa0922340-mRNA-1:five_prime_utr;Parent=Msa0922340-mRNA-1 |
chr6_2 | CDS | 60648373 | 60648689 | 60648373 | ID=Msa0922340-mRNA-1:cds;Parent=Msa0922340-mRNA-1 |
chr6_2 | CDS | 60646183 | 60646247 | 60646183 | ID=Msa0922340-mRNA-1:cds;Parent=Msa0922340-mRNA-1 |
chr6_2 | CDS | 60644468 | 60644781 | 60644468 | ID=Msa0922340-mRNA-1:cds;Parent=Msa0922340-mRNA-1 |
chr6_2 | CDS | 60643853 | 60644032 | 60643853 | ID=Msa0922340-mRNA-1:cds;Parent=Msa0922340-mRNA-1 |
chr6_2 | CDS | 60643231 | 60643455 | 60643231 | ID=Msa0922340-mRNA-1:cds;Parent=Msa0922340-mRNA-1 |
chr6_2 | three_prime_UTR | 60642823 | 60643230 | 60642823 | ID=Msa0922340-mRNA-1:three_prime_utr;Parent=Msa0922340-mRNA-1 |
Gene Sequence |
Protein sequence |