Alfalfa Gene Editing Database
Alfalfa Gene Editing Database
| Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa1118910 | XP_013450213.1 | 99.359 | 780 | 5 | 0 | 1 | 780 | 1 | 780 | 0.0 | 1611 |
| Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa1118910 | sp|Q6DW74|DGDG1_LOTJA | 88.384 | 792 | 74 | 6 | 1 | 780 | 1 | 786 | 0.0 | 1437 |
| Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa1118910 | A0A072U4F9 | 99.359 | 780 | 5 | 0 | 1 | 780 | 1 | 780 | 0.0 | 1611 |
| Gene ID | Type | Classification |
|---|
| Gene ID | Type | Classification |
|---|
Co-expression Network
| Gene1 | Gene2 | correlation coefficient | p_value | FDR |
|---|---|---|---|---|
| Msa0039200 | Msa1118910 | 0.802884 | 4.538731e-49 | -8.615850e-47 |
| Msa0047940 | Msa1118910 | 0.805221 | 1.481876e-49 | -8.615850e-47 |
| Msa0050500 | Msa1118910 | 0.800433 | 1.444700e-48 | -8.615850e-47 |
| Msa0060600 | Msa1118910 | 0.809299 | 2.026751e-50 | -8.615850e-47 |
| Msa0086820 | Msa1118910 | 0.800973 | 1.121004e-48 | -8.615850e-47 |
| Msa0105340 | Msa1118910 | 0.816711 | 4.803501e-52 | -8.615850e-47 |
| Msa0605230 | Msa1118910 | 0.800400 | 1.467120e-48 | -8.615850e-47 |
| Msa0616910 | Msa1118910 | 0.801632 | 8.216602e-49 | -8.615850e-47 |
| Msa0617830 | Msa1118910 | 0.800785 | 1.224266e-48 | -8.615850e-47 |
| Msa0630960 | Msa1118910 | 0.818989 | 1.469606e-52 | -8.615850e-47 |
| Msa0653710 | Msa1118910 | 0.804954 | 1.685579e-49 | -8.615850e-47 |
| Msa0662850 | Msa1118910 | 0.802561 | 5.293118e-49 | -8.615850e-47 |
| Msa0669200 | Msa1118910 | 0.801888 | 7.279920e-49 | -8.615850e-47 |
| Msa0717850 | Msa1118910 | 0.802885 | 4.536177e-49 | -8.615850e-47 |
| Msa0736930 | Msa1118910 | 0.833367 | 5.554413e-56 | -8.615850e-47 |
| Msa0797620 | Msa1118910 | 0.808303 | 3.309972e-50 | -8.615850e-47 |
| Msa0798070 | Msa1118910 | 0.811936 | 5.454685e-51 | -8.615850e-47 |
| Msa0800680 | Msa1118910 | 0.807944 | 3.945805e-50 | -8.615850e-47 |
| Msa0133670 | Msa1118910 | 0.805526 | 1.279290e-49 | -8.615850e-47 |
| Msa0133880 | Msa1118910 | 0.817481 | 3.225217e-52 | -8.615850e-47 |
| Msa0151690 | Msa1118910 | 0.815974 | 7.021892e-52 | -8.615850e-47 |
| Msa0184120 | Msa1118910 | 0.804786 | 1.827252e-49 | -8.615850e-47 |
| Msa0193650 | Msa1118910 | 0.836155 | 1.104093e-56 | -8.615850e-47 |
| Msa0368370 | Msa1118910 | 0.809644 | 1.708559e-50 | -8.615850e-47 |
| Msa0369750 | Msa1118910 | 0.806201 | 9.226726e-50 | -8.615850e-47 |
| Msa0423110 | Msa1118910 | 0.815490 | 9.003539e-52 | -8.615850e-47 |
| Msa0427050 | Msa1118910 | 0.842222 | 2.950929e-58 | -8.615850e-47 |
| Msa0448400 | Msa1118910 | 0.826284 | 2.951244e-54 | -8.615850e-47 |
| Msa0471790 | Msa1118910 | 0.804002 | 2.662682e-49 | -8.615850e-47 |
| Msa0472530 | Msa1118910 | 0.822255 | 2.612163e-53 | -8.615850e-47 |
| Msa0473450 | Msa1118910 | 0.836733 | 7.871659e-57 | -8.615850e-47 |
| Msa0480210 | Msa1118910 | 0.811484 | 6.840025e-51 | -8.615850e-47 |
| Msa0982590 | Msa1118910 | 0.811456 | 6.939854e-51 | -8.615850e-47 |
| Msa0988500 | Msa1118910 | 0.809070 | 2.269631e-50 | -8.615850e-47 |
| Msa1024580 | Msa1118910 | 0.820464 | 6.763982e-53 | -8.615850e-47 |
| Msa1030280 | Msa1118910 | 0.809781 | 1.597239e-50 | -8.615850e-47 |
| Msa1080770 | Msa1118910 | 0.953794 | 1.247280e-111 | -8.615850e-47 |
| Msa1089530 | Msa1118910 | 0.801696 | 7.971034e-49 | -8.615850e-47 |
| Msa1102180 | Msa1118910 | 0.852201 | 5.391770e-61 | -8.615850e-47 |
| Msa0243620 | Msa1118910 | 0.830424 | 2.959628e-55 | -8.615850e-47 |
| Msa0243690 | Msa1118910 | 0.822928 | 1.822070e-53 | -8.615850e-47 |
| Msa0270610 | Msa1118910 | 0.814512 | 1.483471e-51 | -8.615850e-47 |
| Msa0273710 | Msa1118910 | 0.823705 | 1.199759e-53 | -8.615850e-47 |
| Msa0282200 | Msa1118910 | 0.825190 | 5.365828e-54 | -8.615850e-47 |
| Msa0282500 | Msa1118910 | 0.822822 | 1.928345e-53 | -8.615850e-47 |
| Msa0313990 | Msa1118910 | 0.824271 | 8.836202e-54 | -8.615850e-47 |
| Msa0330270 | Msa1118910 | 0.802081 | 6.644655e-49 | -8.615850e-47 |
| Msa0338570 | Msa1118910 | 0.806134 | 9.530881e-50 | -8.615850e-47 |
| Msa1108530 | Msa1118910 | 0.809026 | 2.318845e-50 | -8.615850e-47 |
| Msa1118910 | Msa1123340 | 0.805045 | 1.613767e-49 | -8.615850e-47 |
| Msa1118910 | Msa1152280 | 0.803932 | 2.753609e-49 | -8.615850e-47 |
| Msa1118910 | Msa1157160 | 0.815202 | 1.043105e-51 | -8.615850e-47 |
| Msa1118910 | Msa1178920 | 0.820671 | 6.064226e-53 | -8.615850e-47 |
| Msa1118910 | Msa1208810 | 0.840262 | 9.667797e-58 | -8.615850e-47 |
| Msa1118910 | Msa1221900 | 0.813404 | 2.604130e-51 | -8.615850e-47 |
| Msa1118910 | Msa1259010 | 0.812054 | 5.142482e-51 | -8.615850e-47 |
| Msa1118910 | Msa1265070 | 0.823204 | 1.571116e-53 | -8.615850e-47 |
| Msa1118910 | Msa1265250 | 0.841785 | 3.849707e-58 | -8.615850e-47 |
| Msa1118910 | Msa1306700 | 0.830601 | 2.679776e-55 | -8.615850e-47 |
| Msa1118910 | Msa1310260 | 0.829362 | 5.370106e-55 | -8.615850e-47 |
| Msa1118910 | Msa1314330 | 0.823595 | 1.272505e-53 | -8.615850e-47 |
| Msa1118910 | Msa1327820 | 0.816400 | 5.638463e-52 | -8.615850e-47 |
| Msa1118910 | Msa1370650 | 0.948971 | 3.262521e-107 | -8.615850e-47 |
| Msa1118910 | Msa1385940 | 0.819307 | 1.244068e-52 | -8.615850e-47 |
| Msa1118910 | Msa1386520 | 0.809603 | 1.743757e-50 | -8.615850e-47 |
| Msa1118910 | Msa1435470 | 0.817485 | 3.218946e-52 | -8.615850e-47 |
| Msa0516310 | Msa1118910 | 0.845044 | 5.190543e-59 | -8.615850e-47 |
| Msa0558890 | Msa1118910 | 0.801112 | 1.049732e-48 | -8.615850e-47 |
| Msa0897390 | Msa1118910 | 0.838222 | 3.268460e-57 | -8.615850e-47 |
| Msa0908170 | Msa1118910 | 0.804612 | 1.987315e-49 | -8.615850e-47 |
| Msa0915350 | Msa1118910 | 0.816783 | 4.628207e-52 | -8.615850e-47 |
| Msa0978000 | Msa1118910 | 0.836917 | 7.063464e-57 | -8.615850e-47 |
PPI
| Gene1 | Gene2 | Type |
|---|
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa1118910 | MtrunA17_Chr7g0267461 | 99.359 | 780 | 5 | 0 | 1 | 780 | 1 | 780 | 0.0 | 1611 |
| Msa1118910 | MtrunA17_Chr1g0177731 | 69.961 | 779 | 154 | 12 | 7 | 775 | 9 | 717 | 0.0 | 1072 |
| Msa1118910 | MtrunA17_Chr1g0169821 | 55.411 | 462 | 199 | 2 | 305 | 766 | 2 | 456 | 0.0 | 545 |
| Msa1118910 | MtrunA17_Chr6g0487971 | 55.628 | 462 | 198 | 2 | 305 | 766 | 2 | 456 | 0.0 | 543 |
| Msa1118910 | MtrunA17_Chr7g0246881 | 51.071 | 280 | 130 | 2 | 487 | 766 | 9 | 281 | 1.75e-90 | 286 |
| Msa1118910 | MtrunA17_Chr7g0246871 | 65.746 | 181 | 62 | 0 | 307 | 487 | 4 | 184 | 1.83e-87 | 275 |
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa1118910 | AT3G11670.1 | 71.919 | 787 | 196 | 8 | 9 | 780 | 32 | 808 | 0.0 | 1138 |
| Msa1118910 | AT3G11670.2 | 71.639 | 610 | 156 | 7 | 9 | 603 | 32 | 639 | 0.0 | 865 |
| Msa1118910 | AT4G00550.1 | 54.194 | 465 | 206 | 1 | 304 | 768 | 3 | 460 | 0.0 | 558 |
| Msa1118910 | AT4G00550.2 | 54.194 | 465 | 206 | 1 | 304 | 768 | 3 | 460 | 0.0 | 558 |
Find 196 sgRNAs with CRISPR-Local
Find 409 sgRNAs with CRISPR-GE
CRISPR-Local
| sgRNA_sequence | on_target_score | Position | Region |
|---|---|---|---|
| TTTCTACTGCAGTCTCTTTC+TGG | 0.162398 | 7_3:+67677868 | Msa1118910:CDS |
| CACAAATGGGGCATATTTCT+TGG | 0.236982 | 7_3:+67679139 | Msa1118910:CDS |
| TGGCTGCGTTCGTTTCTATT+TGG | 0.238263 | 7_3:-67674488 | None:intergenic |
| CTAGGGACTGGGAACCAATT+AGG | 0.249615 | 7_3:+67674979 | Msa1118910:CDS |
| AGCTGCAACTCAAAGATTTA+TGG | 0.259156 | 7_3:+67679946 | Msa1118910:CDS |
| CAATGCTGCTTGTCATTATC+TGG | 0.269964 | 7_3:-67680288 | None:intergenic |
| GCCTACTTTGTTAAACAGTC+TGG | 0.271133 | 7_3:+67676619 | Msa1118910:CDS |
| GTTTATAGTTGTTTGTAATT+AGG | 0.277931 | 7_3:+67680377 | Msa1118910:three_prime_UTR |
| AACAAAGATATCAGCTTTCT+TGG | 0.280522 | 7_3:+67679921 | Msa1118910:CDS |
| AAGGAGTTGATAGATTTATT+AGG | 0.282241 | 7_3:+67679188 | Msa1118910:CDS |
| GAAGATTCGGATTGATTTAT+CGG | 0.296238 | 7_3:+67674833 | Msa1118910:CDS |
| GGCTTCAAGTTAGATGTATT+CGG | 0.297950 | 7_3:+67679233 | Msa1118910:CDS |
| GGTATGGGCAAAGGGATATA+AGG | 0.315058 | 7_3:+67679169 | Msa1118910:CDS |
| TGAGAAGCTTAAATCAAGTT+TGG | 0.324127 | 7_3:+67675073 | Msa1118910:CDS |
| CATTAGCGTGTTGTGTGTTT+TGG | 0.327307 | 7_3:-67680488 | None:intergenic |
| TATCAGAAAGTTACCTTTCC+AGG | 0.331315 | 7_3:-67678294 | None:intergenic |
| AAAGTTATTTCATGTTAAAC+TGG | 0.337175 | 7_3:-67680587 | None:intergenic |
| TGCAACATGTCTTTCATTGT+TGG | 0.338299 | 7_3:-67678022 | None:intergenic |
| TTGTGAAACACATCAACAAC+TGG | 0.339096 | 7_3:+67678793 | Msa1118910:CDS |
| GAAAGCTGATATCTTTGTTC+AGG | 0.340570 | 7_3:-67679917 | None:intergenic |
| TGGAAACATAAATGATGAAT+TGG | 0.343546 | 7_3:+67677915 | Msa1118910:CDS |
| CGTCGAATCTCCGACAATTT+CGG | 0.351018 | 7_3:-67674753 | None:intergenic |
| TCAAATGCTCTGGTTCTTCC+AGG | 0.351611 | 7_3:-67678653 | None:intergenic |
| AAAGAGACTGCAGTAGAAAT+TGG | 0.353783 | 7_3:-67677864 | None:intergenic |
| TAGGGACTGGGAACCAATTA+GGG | 0.353856 | 7_3:+67674980 | Msa1118910:CDS |
| ACAAAGTAGGCCAGAAGTTC+GGG | 0.357915 | 7_3:-67676607 | None:intergenic |
| GGAGTTAAGGGAAGGAGGTT+AGG | 0.361226 | 7_3:+67674906 | Msa1118910:CDS |
| AACAAAGTAGGCCAGAAGTT+CGG | 0.368406 | 7_3:-67676608 | None:intergenic |
| GAATCTTCTTTACTTGAGAA+TGG | 0.377949 | 7_3:+67677895 | Msa1118910:CDS |
| TGTTCAGGTGTGAGAGGATA+AGG | 0.382423 | 7_3:-67679902 | None:intergenic |
| GAGAAATGATTGCTGAAGAG+AGG | 0.386693 | 7_3:+67679096 | Msa1118910:CDS |
| TGTCTTGTAAGTCAAACAAT+TGG | 0.390346 | 7_3:-67679834 | None:intergenic |
| GCTTCAAGTTAGATGTATTC+GGG | 0.396974 | 7_3:+67679234 | Msa1118910:CDS |
| ACAAATGGGGCATATTTCTT+GGG | 0.400496 | 7_3:+67679140 | Msa1118910:CDS |
| AAGCACAAGGCTGACCTTGA+TGG | 0.407632 | 7_3:+67679212 | Msa1118910:CDS |
| GATAAATTCAACCATGTTGT+TGG | 0.408006 | 7_3:+67678705 | Msa1118910:CDS |
| TCTGTAATTTGCAATGTTCA+TGG | 0.411059 | 7_3:+67679047 | Msa1118910:CDS |
| TATGCAGGTTCTTCGTCTCT+CGG | 0.411565 | 7_3:+67679001 | Msa1118910:intron |
| ACGAACTTCGCGCCAACCTT+TGG | 0.411751 | 7_3:-67674553 | None:intergenic |
| ATACACACCTTTGACTCTTC+AGG | 0.412468 | 7_3:-67676035 | None:intergenic |
| GGGCAGAAGGCTTTCACAAA+TGG | 0.416617 | 7_3:+67679125 | Msa1118910:CDS |
| TCTATTTACCAGCCATAGAT+AGG | 0.417490 | 7_3:-67680226 | None:intergenic |
| GGCAGAAGGCTTTCACAAAT+GGG | 0.423442 | 7_3:+67679126 | Msa1118910:CDS |
| TCGTCTCTCGGCTGCTACTC+AGG | 0.428154 | 7_3:+67679013 | Msa1118910:CDS |
| GGATGCAGACATTGCTATCC+TGG | 0.429511 | 7_3:+67678635 | Msa1118910:CDS |
| GCAAAATCAAGTAGAGATAA+GGG | 0.432974 | 7_3:+67680013 | Msa1118910:CDS |
| AGAGTGGAGTTAAGGGAAGG+AGG | 0.434940 | 7_3:+67674901 | Msa1118910:CDS |
| AGGAAGGTTATATACGTAAC+TGG | 0.435336 | 7_3:+67678223 | Msa1118910:CDS |
| GATTGACTAGTTTGAATATG+TGG | 0.437331 | 7_3:+67680247 | Msa1118910:three_prime_UTR |
| GATAGCAATGTCTGCATCCC+TGG | 0.438918 | 7_3:-67678631 | None:intergenic |
| TGCAAAATCAAGTAGAGATA+AGG | 0.439836 | 7_3:+67680012 | Msa1118910:CDS |
| ATGGCTTTGTGAATCGGATC+AGG | 0.443268 | 7_3:+67678155 | Msa1118910:CDS |
| GGTTCCATGGCTTTGTGAAT+CGG | 0.443585 | 7_3:+67678149 | Msa1118910:CDS |
| TTGAGAGTGGAGTTAAGGGA+AGG | 0.444660 | 7_3:+67674898 | Msa1118910:CDS |
| AAATATGCAGCTCGAAATAG+TGG | 0.445238 | 7_3:-67678093 | None:intergenic |
| GGCATATTTCTTGGGAAAGA+TGG | 0.446034 | 7_3:+67679148 | Msa1118910:CDS |
| AAGTTCAGAGTGCAGCTAGA+AGG | 0.447508 | 7_3:+67679276 | Msa1118910:CDS |
| CTTCTCAATTTATACCATCC+AGG | 0.448604 | 7_3:+67678613 | Msa1118910:CDS |
| ACTGGATGTACCCGAACTTC+TGG | 0.448950 | 7_3:+67676597 | Msa1118910:CDS |
| GACGTGAAGAACTCGTTTGA+TGG | 0.449722 | 7_3:-67679806 | None:intergenic |
| TGGACAAATCATGCTTTGCT+TGG | 0.451981 | 7_3:-67678002 | None:intergenic |
| ATATAACCTTCCTGCTCCTC+AGG | 0.453969 | 7_3:-67678213 | None:intergenic |
| GAAGATGATGATTGCGACTT+GGG | 0.458018 | 7_3:-67674413 | None:intergenic |
| AAAACCTTCTTACTAAAATC+CGG | 0.461964 | 7_3:-67674789 | None:intergenic |
| AACGCGATTGTGTCGGAGGA+AGG | 0.465530 | 7_3:+67674864 | Msa1118910:CDS |
| TGAAGTAAAAGTGAGGTTGC+TGG | 0.465923 | 7_3:-67678190 | None:intergenic |
| ATTTCTTGGGAAAGATGGTA+TGG | 0.468030 | 7_3:+67679153 | Msa1118910:CDS |
| ACAAAGATATCAGCTTTCTT+GGG | 0.469999 | 7_3:+67679922 | Msa1118910:CDS |
| GAAATTGCAACCGAAATTGT+CGG | 0.470374 | 7_3:+67674743 | Msa1118910:CDS |
| GGAAAGATGGTATGGGCAAA+GGG | 0.475919 | 7_3:+67679161 | Msa1118910:CDS |
| TACGGCAGAGGCACTTGCCA+TGG | 0.475994 | 7_3:+67679757 | Msa1118910:CDS |
| TCTCCTTCATCTCCAAAGGT+TGG | 0.478912 | 7_3:+67674541 | Msa1118910:CDS |
| GCGCCAACCTTTGGAGATGA+AGG | 0.479288 | 7_3:-67674544 | None:intergenic |
| ATTGCTGAAGAGAGGGAGCT+AGG | 0.479530 | 7_3:+67679104 | Msa1118910:CDS |
| TCACAACCGCTAGTCTTCCT+TGG | 0.484796 | 7_3:+67678049 | Msa1118910:CDS |
| TTTCCAGGAAGTGCCGCCAC+TGG | 0.489145 | 7_3:+67676579 | Msa1118910:intron |
| AAGAACCAGAGCATTTGAAT+TGG | 0.489660 | 7_3:+67678658 | Msa1118910:CDS |
| CACGGTCGAAGGAGTTTGCT+AGG | 0.492638 | 7_3:-67674632 | None:intergenic |
| ACGTGTCCCGGGTGTTCCTC+CGG | 0.492705 | 7_3:-67680146 | None:intergenic |
| ACATTGCAAATTACAGACTT+AGG | 0.492980 | 7_3:-67679041 | None:intergenic |
| GGACGCCGAGAGCGAAGATT+CGG | 0.496023 | 7_3:+67674820 | Msa1118910:CDS |
| AGAGATAAGGGAAAGCTCAT+TGG | 0.497125 | 7_3:+67680025 | Msa1118910:CDS |
| TCAGAGTGCAGCTAGAAGGT+TGG | 0.499745 | 7_3:+67679280 | Msa1118910:CDS |
| CTTGTCATAAACACGTGTCC+CGG | 0.502339 | 7_3:-67680158 | None:intergenic |
| GGATTATAGACTTAAACAAC+AGG | 0.503942 | 7_3:-67680402 | None:intergenic |
| TACAAGAGCGTACTGTGATA+AGG | 0.504383 | 7_3:+67678818 | Msa1118910:CDS |
| AAGTCACTCTGCTGGTTCCA+TGG | 0.505266 | 7_3:+67678136 | Msa1118910:CDS |
| TGGGAAGGTTTGAAAGGGGA+AGG | 0.505841 | 7_3:+67674933 | Msa1118910:CDS |
| CATCTAACTTGAAGCCATCA+AGG | 0.505951 | 7_3:-67679226 | None:intergenic |
| GAAGTAAAAGTGAGGTTGCT+GGG | 0.506240 | 7_3:-67678189 | None:intergenic |
| TGATACCAATTCAAATGCTC+TGG | 0.506687 | 7_3:-67678663 | None:intergenic |
| TCTGCTAGTTCTGAAAGATT+AGG | 0.507342 | 7_3:-67680064 | None:intergenic |
| CATTTGAATTGGTATCATCA+TGG | 0.507403 | 7_3:+67678669 | Msa1118910:CDS |
| TGAAGAAATTCTCGAGTTCA+CGG | 0.509107 | 7_3:-67674650 | None:intergenic |
| GGGAAAGATGGTATGGGCAA+AGG | 0.509523 | 7_3:+67679160 | Msa1118910:CDS |
| AAGTTAGATGTATTCGGGAA+TGG | 0.509775 | 7_3:+67679239 | Msa1118910:CDS |
| AACTGGCTTGAGGAAAGGAT+TGG | 0.509996 | 7_3:+67678240 | Msa1118910:CDS |
| CGCTAGTCTTCCTTGGATGA+CGG | 0.510054 | 7_3:+67678056 | Msa1118910:CDS |
| AGCACAGGGCACCGGTATGA+AGG | 0.510723 | 7_3:+67677964 | Msa1118910:CDS |
| TCAAATCCTGAACAAGGAAA+AGG | 0.511053 | 7_3:+67679985 | Msa1118910:CDS |
| ATGAAGGAGAAAGCGCTTGA+AGG | 0.512416 | 7_3:-67674528 | None:intergenic |
| TTTCTTCAATTCTGCCGCAC+CGG | 0.513277 | 7_3:+67674665 | Msa1118910:CDS |
| GTGAAGGTGAGAGTGAAACT+AGG | 0.513989 | 7_3:+67674961 | Msa1118910:CDS |
| TTGAATCTCAACTTTCAGAA+AGG | 0.514750 | 7_3:+67679305 | Msa1118910:CDS |
| ACCGGTATGAAGGTGGACTT+TGG | 0.515522 | 7_3:+67677974 | Msa1118910:CDS |
| TGTGTTTCACAAAGAACGCC+TGG | 0.517061 | 7_3:-67678782 | None:intergenic |
| GCTAGTGTCCTTCAGAGCAC+AGG | 0.521149 | 7_3:+67677949 | Msa1118910:CDS |
| GTGAGAGTGAAACTAGGGAC+TGG | 0.521272 | 7_3:+67674967 | Msa1118910:CDS |
| TTTGCTCACTATTGTCTCAC+AGG | 0.521736 | 7_3:+67680100 | Msa1118910:CDS |
| TTCCTCCGGTACATAATCTC+AGG | 0.522670 | 7_3:-67680132 | None:intergenic |
| CCTACTTTGTTAAACAGTCT+GGG | 0.522899 | 7_3:+67676620 | Msa1118910:CDS |
| GTCTTGTAAGTCAAACAATT+GGG | 0.524516 | 7_3:-67679833 | None:intergenic |
| ACCGGTGCCCTGTGCTCTGA+AGG | 0.527824 | 7_3:-67677957 | None:intergenic |
| ACGCGATTGTGTCGGAGGAA+GGG | 0.530847 | 7_3:+67674865 | Msa1118910:CDS |
| GCTTTCTCCTTCATCTCCAA+AGG | 0.532841 | 7_3:+67674537 | Msa1118910:CDS |
| TTGCTGAAGAGAGGGAGCTA+GGG | 0.535297 | 7_3:+67679105 | Msa1118910:CDS |
| CAGGTGGAAAGTCCTATCTA+TGG | 0.536359 | 7_3:+67680214 | Msa1118910:CDS |
| GCTAGTCTTCCTTGGATGAC+GGG | 0.537903 | 7_3:+67678057 | Msa1118910:CDS |
| ATTTGAATTGGTATCATCAT+GGG | 0.539471 | 7_3:+67678670 | Msa1118910:CDS |
| CAAAGAACCTGAAGAGTCAA+AGG | 0.540106 | 7_3:+67676028 | Msa1118910:CDS |
| AGAAGATGATGATTGCGACT+TGG | 0.540560 | 7_3:-67674414 | None:intergenic |
| TAAGAACGCGATTGTGTCGG+AGG | 0.541398 | 7_3:+67674860 | Msa1118910:CDS |
| AGATAGGACTTTCCACCTGT+GGG | 0.544277 | 7_3:-67680210 | None:intergenic |
| TCCAAAGTCCACCTTCATAC+CGG | 0.545177 | 7_3:-67677975 | None:intergenic |
| TCCTTCAGAGCACAGGGCAC+CGG | 0.546163 | 7_3:+67677956 | Msa1118910:CDS |
| AGAGAGGGAGCTAGGGCAGA+AGG | 0.547538 | 7_3:+67679112 | Msa1118910:CDS |
| TTCTCAATTTATACCATCCA+GGG | 0.547921 | 7_3:+67678614 | Msa1118910:CDS |
| TTATGTACCGGAGGAACACC+CGG | 0.551313 | 7_3:+67680139 | Msa1118910:CDS |
| TCGACGCGCTTACTCCTCTC+CGG | 0.553563 | 7_3:+67674770 | Msa1118910:CDS |
| AAAACAGAAAGTCACTCTGC+TGG | 0.553769 | 7_3:+67678128 | Msa1118910:CDS |
| GGTATCATCATGGGAAGCGC+TGG | 0.554999 | 7_3:+67678679 | Msa1118910:CDS |
| TGGAAAGTCCTATCTATGGC+TGG | 0.556422 | 7_3:+67680218 | Msa1118910:CDS |
| TTAACAAATTCGATTTCCGC+AGG | 0.560704 | 7_3:-67674720 | None:intergenic |
| TACGTAACTGGCTTGAGGAA+AGG | 0.567471 | 7_3:+67678235 | Msa1118910:CDS |
| GATCAAATTGGAGTCGGCAA+AGG | 0.567857 | 7_3:+67676652 | Msa1118910:CDS |
| TTGTCATAAACACGTGTCCC+GGG | 0.569933 | 7_3:-67680157 | None:intergenic |
| GATGAGGTCTCCTCCGCCTG+CGG | 0.571420 | 7_3:+67674704 | Msa1118910:CDS |
| AAGGAGAAAGCGCTTGAAGG+TGG | 0.571869 | 7_3:-67674525 | None:intergenic |
| ATTCTCGAGTTCACGGTCGA+AGG | 0.573711 | 7_3:-67674643 | None:intergenic |
| ACTGCTGTTCCCGTCATCCA+AGG | 0.575775 | 7_3:-67678066 | None:intergenic |
| GGCGGAGGAGACCTCATCGC+CGG | 0.577240 | 7_3:-67674699 | None:intergenic |
| AGATGTATTCGGGAATGGAG+AGG | 0.577910 | 7_3:+67679244 | Msa1118910:CDS |
| ATTACTTAGAATACATCAAG+AGG | 0.582995 | 7_3:+67678742 | Msa1118910:CDS |
| TCAATCCGAATCTTCGCTCT+CGG | 0.584130 | 7_3:-67674825 | None:intergenic |
| TGAAGGTGAGAGTGAAACTA+GGG | 0.584384 | 7_3:+67674962 | Msa1118910:CDS |
| ACGCAGATGATTCTCTTCAC+AGG | 0.587899 | 7_3:+67679336 | Msa1118910:CDS |
| AGGTGGATGCTGTGTAGCCA+TGG | 0.590585 | 7_3:-67674508 | None:intergenic |
| TTTCTTGGGAAAGATGGTAT+GGG | 0.592867 | 7_3:+67679154 | Msa1118910:CDS |
| AATAGAAACGAACGCAGCCA+TGG | 0.596052 | 7_3:+67674491 | Msa1118910:exon |
| TATCTTTGTTCAGGTGTGAG+AGG | 0.598053 | 7_3:-67679908 | None:intergenic |
| AATCTTTCAGAACTAGCAGA+TGG | 0.598240 | 7_3:+67680067 | Msa1118910:CDS |
| TAGATAGGACTTTCCACCTG+TGG | 0.599056 | 7_3:-67680211 | None:intergenic |
| GCTTGATCAAATCCTGAACA+AGG | 0.600933 | 7_3:+67679979 | Msa1118910:CDS |
| GATTAAGAACGCGATTGTGT+CGG | 0.601945 | 7_3:+67674857 | Msa1118910:CDS |
| AGACGTAGTATAATGCCCGC+TGG | 0.602103 | 7_3:+67678585 | Msa1118910:CDS |
| AAAGGGGAAGGTGAAGGTGA+AGG | 0.602111 | 7_3:+67674945 | Msa1118910:CDS |
| GCTGTGCACAGCTACGGCAG+AGG | 0.602300 | 7_3:+67679745 | Msa1118910:CDS |
| GGTTTGAAAGGGGAAGGTGA+AGG | 0.603945 | 7_3:+67674939 | Msa1118910:CDS |
| CTAGTGTCCTTCAGAGCACA+GGG | 0.604199 | 7_3:+67677950 | Msa1118910:CDS |
| CTTTCAGAACTAGCAGATGG+AGG | 0.605213 | 7_3:+67680070 | Msa1118910:CDS |
| ACGGCAGAGGCACTTGCCAT+GGG | 0.606286 | 7_3:+67679758 | Msa1118910:CDS |
| AGAAATGATTGCTGAAGAGA+GGG | 0.607983 | 7_3:+67679097 | Msa1118910:CDS |
| AATTGAGAAGTATCTCCAGC+GGG | 0.609948 | 7_3:-67678600 | None:intergenic |
| TGATGTGCTGTGCACAGCTA+CGG | 0.613094 | 7_3:+67679739 | Msa1118910:CDS |
| CCCAGACTGTTTAACAAAGT+AGG | 0.613834 | 7_3:-67676620 | None:intergenic |
| TTATATACGTAACTGGCTTG+AGG | 0.616731 | 7_3:+67678230 | Msa1118910:CDS |
| TATGTACCGGAGGAACACCC+GGG | 0.618590 | 7_3:+67680140 | Msa1118910:CDS |
| AGAAGTTCGGGTACATCCAG+TGG | 0.624604 | 7_3:-67676595 | None:intergenic |
| GCAATGTCTGCATCCCTGGA+TGG | 0.624953 | 7_3:-67678627 | None:intergenic |
| CACAGCACATCACTGATGCT+AGG | 0.628610 | 7_3:-67679728 | None:intergenic |
| ACTTCACCTGAGGAGCAGGA+AGG | 0.631809 | 7_3:+67678207 | Msa1118910:CDS |
| TGTTCATTGATGTAACTCGT+AGG | 0.635414 | 7_3:+67680543 | Msa1118910:three_prime_UTR |
| TCATCATGGGAAGCGCTGGA+CGG | 0.636735 | 7_3:+67678683 | Msa1118910:CDS |
| ACAAATTCGATTTCCGCAGG+CGG | 0.636923 | 7_3:-67674717 | None:intergenic |
| TGATCCGATTCACAAAGCCA+TGG | 0.638436 | 7_3:-67678153 | None:intergenic |
| ATAGGACTTTCCACCTGTGG+GGG | 0.640769 | 7_3:-67680208 | None:intergenic |
| TGAGAGTGAAACTAGGGACT+GGG | 0.648236 | 7_3:+67674968 | Msa1118910:CDS |
| CTTCTTACTAAAATCCGGAG+AGG | 0.653969 | 7_3:-67674784 | None:intergenic |
| GAGTTCCTGAGATTATGTAC+CGG | 0.654856 | 7_3:+67680127 | Msa1118910:CDS |
| TGTGAAACACATCAACAACT+GGG | 0.656414 | 7_3:+67678794 | Msa1118910:CDS |
| TTCCTGAGATTATGTACCGG+AGG | 0.656952 | 7_3:+67680130 | Msa1118910:CDS |
| GCAGAAGGCTTTCACAAATG+GGG | 0.664112 | 7_3:+67679127 | Msa1118910:CDS |
| TTGCTCACTATTGTCTCACA+GGG | 0.666888 | 7_3:+67680101 | Msa1118910:CDS |
| ACAGGGCACCGGTATGAAGG+TGG | 0.668604 | 7_3:+67677967 | Msa1118910:CDS |
| GATAGGACTTTCCACCTGTG+GGG | 0.669701 | 7_3:-67680209 | None:intergenic |
| TTACTTAGAATACATCAAGA+GGG | 0.670566 | 7_3:+67678743 | Msa1118910:CDS |
| AGATTTATTAGGAAAGCACA+AGG | 0.671804 | 7_3:+67679199 | Msa1118910:CDS |
| CGGAACAGAAAACGCCGGTG+CGG | 0.673374 | 7_3:-67674679 | None:intergenic |
| AGTTCGTGATTCAGCAGACG+CGG | 0.677691 | 7_3:+67674569 | Msa1118910:CDS |
| TGTGCACAATGCCAACAACA+TGG | 0.688603 | 7_3:-67678716 | None:intergenic |
| CCTCAGGTGAAGTAAAAGTG+AGG | 0.690497 | 7_3:-67678197 | None:intergenic |
| ATCCTGAACAAGGAAAAGGA+TGG | 0.691634 | 7_3:+67679989 | Msa1118910:CDS |
| AGTTCGGGTACATCCAGTGG+CGG | 0.703475 | 7_3:-67676592 | None:intergenic |
| AAATTGAGAAGTATCTCCAG+CGG | 0.703598 | 7_3:-67678601 | None:intergenic |
| CGTCATCCAAGGAAGACTAG+CGG | 0.706377 | 7_3:-67678055 | None:intergenic |
| ATCGCCGGAACAGAAAACGC+CGG | 0.715018 | 7_3:-67674684 | None:intergenic |
CRISPR-GE
| badsite warning | sgRNA_sequence | Strand | Position | Region | GC_content |
|---|---|---|---|---|---|
| !! | TTCATAAAAATGAAATAAAA+CGG | - | chr7_3:67675925-67675944 | None:intergenic | 10.0% |
| !!! | TATTTCATAAAATTTGTTTT+TGG | + | chr7_3:67677298-67677317 | Msa1118910:intron | 10.0% |
| !!! | ATTTCATAAAATTTGTTTTT+GGG | + | chr7_3:67677299-67677318 | Msa1118910:intron | 10.0% |
| !!! | TTCAATTTTAATATGATAAA+TGG | - | chr7_3:67677648-67677667 | None:intergenic | 10.0% |
| !!! | ATTCATTTTTCAAGTTTTTA+AGG | + | chr7_3:67675272-67675291 | Msa1118910:intron | 15.0% |
| !!! | TTCATTTTTCAAGTTTTTAA+GGG | + | chr7_3:67675273-67675292 | Msa1118910:intron | 15.0% |
| !!! | AGCAAAATTAATATTTTCTT+TGG | + | chr7_3:67675331-67675350 | Msa1118910:intron | 15.0% |
| !! | AAAAAAAAAATATAAGACTC+TGG | - | chr7_3:67675568-67675587 | None:intergenic | 15.0% |
| !!! | ATTTTTTTTTTTTTGTTCCT+TGG | + | chr7_3:67675577-67675596 | Msa1118910:intron | 15.0% |
| !!! | GTAATTTGTTTAGTTTTTTT+TGG | + | chr7_3:67676065-67676084 | Msa1118910:intron | 15.0% |
| !! | AAGATATGATAAAGAAATAA+GGG | + | chr7_3:67676385-67676404 | Msa1118910:intron | 15.0% |
| !! | GAAAACAATATTGAAATAAT+GGG | - | chr7_3:67677619-67677638 | None:intergenic | 15.0% |
| !! | AGAAAACAATATTGAAATAA+TGG | - | chr7_3:67677620-67677639 | None:intergenic | 15.0% |
| !! | AACTAATCAACAAAATTAAA+GGG | - | chr7_3:67677778-67677797 | None:intergenic | 15.0% |
| !! | ATATTCAAATCATGTTAAAA+AGG | + | chr7_3:67678386-67678405 | Msa1118910:intron | 15.0% |
| !! | TATTCAAATCATGTTAAAAA+GGG | + | chr7_3:67678387-67678406 | Msa1118910:intron | 15.0% |
| !! | TTATTGCATTAAATTAAACA+AGG | - | chr7_3:67678418-67678437 | None:intergenic | 15.0% |
| !! | ATTATTTATGATTTATATGC+AGG | + | chr7_3:67678986-67679005 | Msa1118910:intron | 15.0% |
| !! | TTAAATTACAATACATTCAT+TGG | + | chr7_3:67679379-67679398 | Msa1118910:intron | 15.0% |
| !! | ATAAACAATGTAAAAAGAAA+TGG | - | chr7_3:67679675-67679694 | None:intergenic | 15.0% |
| !! | CATTGTAAAAAAGTTATAAA+TGG | + | chr7_3:67680306-67680325 | Msa1118910:three_prime_UTR | 15.0% |
| !! | TGTTTATGTTAATGATTCAT+AGG | + | chr7_3:67675515-67675534 | Msa1118910:intron | 20.0% |
| !! | TCTTTCTATGAATCATAATT+TGG | + | chr7_3:67675718-67675737 | Msa1118910:intron | 20.0% |
| !! | CTTTCTATGAATCATAATTT+GGG | + | chr7_3:67675719-67675738 | Msa1118910:intron | 20.0% |
| !! | TTTCTATGAATCATAATTTG+GGG | + | chr7_3:67675720-67675739 | Msa1118910:intron | 20.0% |
| !!! | ACTATTAAATGTTGTTTATG+TGG | + | chr7_3:67675874-67675893 | Msa1118910:intron | 20.0% |
| !! | AGAAAAAATTTATGTCCAAA+GGG | - | chr7_3:67676259-67676278 | None:intergenic | 20.0% |
| !! | TAGAAAAAATTTATGTCCAA+AGG | - | chr7_3:67676260-67676279 | None:intergenic | 20.0% |
| !! | CAAGATATGATAAAGAAATA+AGG | + | chr7_3:67676384-67676403 | Msa1118910:intron | 20.0% |
| !! | GAATGCTATATTTAAACAAT+TGG | + | chr7_3:67676432-67676451 | Msa1118910:intron | 20.0% |
| !!! | TTTGTTATGCATAACTTATA+TGG | + | chr7_3:67676678-67676697 | Msa1118910:intron | 20.0% |
| !! | TTGTTATGCATAACTTATAT+GGG | + | chr7_3:67676679-67676698 | Msa1118910:intron | 20.0% |
| !! | TTTAGATAAGATATGTAAAG+CGG | - | chr7_3:67676737-67676756 | None:intergenic | 20.0% |
| !! | TGTTTCATATAGCTAATATA+CGG | - | chr7_3:67676975-67676994 | None:intergenic | 20.0% |
| !! | GAACTAATCAACAAAATTAA+AGG | - | chr7_3:67677779-67677798 | None:intergenic | 20.0% |
| !!! | TTCAAAATATCTTTTTATCC+TGG | + | chr7_3:67678276-67678295 | Msa1118910:CDS | 20.0% |
| !!! | GGTATGTTAATTTTATATCA+TGG | + | chr7_3:67678839-67678858 | Msa1118910:intron | 20.0% |
| !!! | ATTTTATATCATGGCATTTA+AGG | + | chr7_3:67678848-67678867 | Msa1118910:intron | 20.0% |
| !! | TTGTTTATTTACTTCATTGA+AGG | + | chr7_3:67679687-67679706 | Msa1118910:intron | 20.0% |
| !! | GTTTATAGTTGTTTGTAATT+AGG | + | chr7_3:67680377-67680396 | Msa1118910:three_prime_UTR | 20.0% |
| !! | AATTACAGCTACAAAAATTA+TGG | - | chr7_3:67680426-67680445 | None:intergenic | 20.0% |
| !!! | ATAATTTTTGTAGCTGTAAT+TGG | + | chr7_3:67680425-67680444 | Msa1118910:three_prime_UTR | 20.0% |
| ! | AAAACCTTCTTACTAAAATC+CGG | - | chr7_3:67674792-67674811 | None:intergenic | 25.0% |
| !! | AAGAATTTGGGACTTAAATT+AGG | + | chr7_3:67675373-67675392 | Msa1118910:intron | 25.0% |
| !!! | AAGTTTTGATTGAAGATGTT+TGG | + | chr7_3:67675412-67675431 | Msa1118910:intron | 25.0% |
| !!! | AGTTTTGATTGAAGATGTTT+GGG | + | chr7_3:67675413-67675432 | Msa1118910:intron | 25.0% |
| ! | TATGTTAATGATTCATAGGT+AGG | + | chr7_3:67675519-67675538 | Msa1118910:intron | 25.0% |
| ! | ATGTTAATGATTCATAGGTA+GGG | + | chr7_3:67675520-67675539 | Msa1118910:intron | 25.0% |
| !!! | GAGTATTTCTTATTTTGACT+TGG | + | chr7_3:67675542-67675561 | Msa1118910:intron | 25.0% |
| !! | AATGTTGTTTATGTGGATAT+TGG | + | chr7_3:67675881-67675900 | Msa1118910:intron | 25.0% |
| !!! | TGTGTTTTTGTGCATAATTT+TGG | + | chr7_3:67675945-67675964 | Msa1118910:intron | 25.0% |
| ! | GAAAAAATTTATGTCCAAAG+GGG | - | chr7_3:67676258-67676277 | None:intergenic | 25.0% |
| !!! | TTATGTTTCGATTTTGACAT+CGG | + | chr7_3:67676327-67676346 | Msa1118910:intron | 25.0% |
| ! | TTAGATAAGATATGTAAAGC+GGG | - | chr7_3:67676736-67676755 | None:intergenic | 25.0% |
| ! | TTATATTACTTTCCATTCGT+AGG | + | chr7_3:67676876-67676895 | Msa1118910:intron | 25.0% |
| !! | ACATTTTATTATCCTACGAA+TGG | - | chr7_3:67676891-67676910 | None:intergenic | 25.0% |
| ! | ACAAAGCAATATTGGATTAA+TGG | + | chr7_3:67677102-67677121 | Msa1118910:intron | 25.0% |
| ! | CAATATTGCTTTGTATAAGA+TGG | - | chr7_3:67677186-67677205 | None:intergenic | 25.0% |
| ! | CATCTTATACAAAGCAATAT+TGG | + | chr7_3:67677184-67677203 | Msa1118910:intron | 25.0% |
| !!! | ATATTTTAAGAGAAACTGCA+TGG | - | chr7_3:67677251-67677270 | None:intergenic | 25.0% |
| !!! | TATTTTGAAGAGTAACAAGA+TGG | - | chr7_3:67677382-67677401 | None:intergenic | 25.0% |
| ! | TAACTGACTAACTAATCATA+TGG | - | chr7_3:67677506-67677525 | None:intergenic | 25.0% |
| !! | GAAGTATATTTTCAAACCAA+TGG | - | chr7_3:67677572-67677591 | None:intergenic | 25.0% |
| ! | AAACATTAATGAACAGTATC+AGG | - | chr7_3:67677676-67677695 | None:intergenic | 25.0% |
| ! | TGGAAACATAAATGATGAAT+TGG | + | chr7_3:67677915-67677934 | Msa1118910:CDS | 25.0% |
| !! | AATATCTTTTTATCCTGGAA+AGG | + | chr7_3:67678281-67678300 | Msa1118910:CDS | 25.0% |
| !! | TAACATCTTAAGCTTTTGAT+TGG | + | chr7_3:67678435-67678454 | Msa1118910:intron | 25.0% |
| ! | ATTTGAATTGGTATCATCAT+GGG | + | chr7_3:67678670-67678689 | Msa1118910:CDS | 25.0% |
| ! | ATTACTTAGAATACATCAAG+AGG | + | chr7_3:67678742-67678761 | Msa1118910:CDS | 25.0% |
| ! | TTACTTAGAATACATCAAGA+GGG | + | chr7_3:67678743-67678762 | Msa1118910:CDS | 25.0% |
| !! | CATTTAAGGTTGAATTAACT+CGG | + | chr7_3:67678862-67678881 | Msa1118910:intron | 25.0% |
| !! | ATTTAAGGTTGAATTAACTC+GGG | + | chr7_3:67678863-67678882 | Msa1118910:intron | 25.0% |
| !! | TAGAAATGATTACTGTGTTT+TGG | + | chr7_3:67678901-67678920 | Msa1118910:intron | 25.0% |
| ! | AATCCCAAGTTCTTAAAAAT+TGG | + | chr7_3:67679074-67679093 | Msa1118910:CDS | 25.0% |
| !!! | TCTCCAATTTTTAAGAACTT+GGG | - | chr7_3:67679080-67679099 | None:intergenic | 25.0% |
| !!! | TTCTCCAATTTTTAAGAACT+TGG | - | chr7_3:67679081-67679100 | None:intergenic | 25.0% |
| !!! | AAGGAGTTGATAGATTTATT+AGG | + | chr7_3:67679188-67679207 | Msa1118910:CDS | 25.0% |
| !! | TGAAACAAACTACACAATTT+TGG | + | chr7_3:67679421-67679440 | Msa1118910:intron | 25.0% |
| !! | GAAACAAACTACACAATTTT+GGG | + | chr7_3:67679422-67679441 | Msa1118910:intron | 25.0% |
| ! | AAGTTGCATTTATTACAACA+TGG | + | chr7_3:67679456-67679475 | Msa1118910:intron | 25.0% |
| ! | TGGAATCAAATTTAATACTG+TGG | - | chr7_3:67679655-67679674 | None:intergenic | 25.0% |
| ! | GTAAAAAAGTTATAAATGGC+TGG | + | chr7_3:67680310-67680329 | Msa1118910:three_prime_UTR | 25.0% |
| !!! | TTAACGGCTAAGATTTTTTG+TGG | - | chr7_3:67674389-67674408 | None:intergenic | 30.0% |
| !! | GGATTTTAGTAAGAAGGTTT+TGG | + | chr7_3:67674791-67674810 | Msa1118910:CDS | 30.0% |
| ! | GAAGATTCGGATTGATTTAT+CGG | + | chr7_3:67674833-67674852 | Msa1118910:CDS | 30.0% |
| TGAGAAGCTTAAATCAAGTT+TGG | + | chr7_3:67675073-67675092 | Msa1118910:CDS | 30.0% | |
| ! | TAAAACCAGAAAAGTGTGAA+AGG | - | chr7_3:67675114-67675133 | None:intergenic | 30.0% |
| AAATGCGTACAAGAAGAATT+TGG | + | chr7_3:67675360-67675379 | Msa1118910:intron | 30.0% | |
| AATGCGTACAAGAAGAATTT+GGG | + | chr7_3:67675361-67675380 | Msa1118910:intron | 30.0% | |
| ATAATTTGGGGATGATTCAT+TGG | + | chr7_3:67675732-67675751 | Msa1118910:intron | 30.0% | |
| AACATGCTTGATCGAATATT+AGG | + | chr7_3:67676098-67676117 | Msa1118910:intron | 30.0% | |
| AAAAAGCAAAACTTGTACCT+AGG | + | chr7_3:67676144-67676163 | Msa1118910:intron | 30.0% | |
| TGTATTCACTGTATTGTGTA+AGG | - | chr7_3:67676215-67676234 | None:intergenic | 30.0% | |
| !! | TACAAGTTGATGACATGTAT+AGG | - | chr7_3:67676481-67676500 | None:intergenic | 30.0% |
| ATTCTCGTATCTTCTAAACT+TGG | + | chr7_3:67676506-67676525 | Msa1118910:intron | 30.0% | |
| TTCTCGTATCTTCTAAACTT+GGG | + | chr7_3:67676507-67676526 | Msa1118910:intron | 30.0% | |
| ACTCCAATTTGATCCAAAAA+TGG | - | chr7_3:67676646-67676665 | None:intergenic | 30.0% | |
| ! | TTTTTGGATCAAATTGGAGT+CGG | + | chr7_3:67676646-67676665 | Msa1118910:CDS | 30.0% |
| TAAAATGTGAGCTAAGAATC+TGG | + | chr7_3:67676903-67676922 | Msa1118910:intron | 30.0% | |
| TATGAAACATACCAATGCAA+TGG | + | chr7_3:67676986-67677005 | Msa1118910:intron | 30.0% | |
| !! | TATGTTCTCTGCATTGATTA+AGG | - | chr7_3:67677405-67677424 | None:intergenic | 30.0% |
| GTCAGTTATATTTCAACTGT+TGG | + | chr7_3:67677518-67677537 | Msa1118910:intron | 30.0% | |
| GTTCATTAATGTTTGTGAGT+AGG | + | chr7_3:67677682-67677701 | Msa1118910:intron | 30.0% | |
| GAATCTTCTTTACTTGAGAA+TGG | + | chr7_3:67677895-67677914 | Msa1118910:CDS | 30.0% | |
| ATTGGTTGTGTCTATACTAT+AGG | + | chr7_3:67678453-67678472 | Msa1118910:intron | 30.0% | |
| TTCTCAATTTATACCATCCA+GGG | + | chr7_3:67678614-67678633 | Msa1118910:CDS | 30.0% | |
| CATTTGAATTGGTATCATCA+TGG | + | chr7_3:67678669-67678688 | Msa1118910:CDS | 30.0% | |
| GATAAATTCAACCATGTTGT+TGG | + | chr7_3:67678705-67678724 | Msa1118910:CDS | 30.0% | |
| !! | TTTGGTTGATAAGTTTGTCA+TGG | + | chr7_3:67678919-67678938 | Msa1118910:intron | 30.0% |
| ACATTGCAAATTACAGACTT+AGG | - | chr7_3:67679044-67679063 | None:intergenic | 30.0% | |
| ! | TCTGTAATTTGCAATGTTCA+TGG | + | chr7_3:67679047-67679066 | Msa1118910:CDS | 30.0% |
| ! | AGATTTATTAGGAAAGCACA+AGG | + | chr7_3:67679199-67679218 | Msa1118910:CDS | 30.0% |
| TTGAATCTCAACTTTCAGAA+AGG | + | chr7_3:67679305-67679324 | Msa1118910:CDS | 30.0% | |
| TTGATTCACTGTATGAAGAT+AGG | - | chr7_3:67679505-67679524 | None:intergenic | 30.0% | |
| ! | ATACATGAAAAGGACTGTTT+TGG | - | chr7_3:67679557-67679576 | None:intergenic | 30.0% |
| ! | TCCTTTTCATGTATGCATAA+AGG | + | chr7_3:67679563-67679582 | Msa1118910:intron | 30.0% |
| TCCTTTATGCATACATGAAA+AGG | - | chr7_3:67679567-67679586 | None:intergenic | 30.0% | |
| CATGAACAATTATCATGTGT+AGG | - | chr7_3:67679597-67679616 | None:intergenic | 30.0% | |
| ! | ACAAACTACAAATTTTCCCA+TGG | - | chr7_3:67679777-67679796 | None:intergenic | 30.0% |
| GTCTTGTAAGTCAAACAATT+GGG | - | chr7_3:67679836-67679855 | None:intergenic | 30.0% | |
| TGTCTTGTAAGTCAAACAAT+TGG | - | chr7_3:67679837-67679856 | None:intergenic | 30.0% | |
| AACAAAGATATCAGCTTTCT+TGG | + | chr7_3:67679921-67679940 | Msa1118910:CDS | 30.0% | |
| ACAAAGATATCAGCTTTCTT+GGG | + | chr7_3:67679922-67679941 | Msa1118910:CDS | 30.0% | |
| TGCAAAATCAAGTAGAGATA+AGG | + | chr7_3:67680012-67680031 | Msa1118910:CDS | 30.0% | |
| GCAAAATCAAGTAGAGATAA+GGG | + | chr7_3:67680013-67680032 | Msa1118910:CDS | 30.0% | |
| !! | GATTGACTAGTTTGAATATG+TGG | + | chr7_3:67680247-67680266 | Msa1118910:three_prime_UTR | 30.0% |
| GGATTATAGACTTAAACAAC+AGG | - | chr7_3:67680405-67680424 | None:intergenic | 30.0% | |
| ! | TGTTCAGTTTTACTGTGTAA+TGG | + | chr7_3:67680509-67680528 | Msa1118910:three_prime_UTR | 30.0% |
| !! | TTGCGACTTGGGAATTTTAA+CGG | - | chr7_3:67674405-67674424 | None:intergenic | 35.0% |
| TGAAGAAATTCTCGAGTTCA+CGG | - | chr7_3:67674653-67674672 | None:intergenic | 35.0% | |
| TTAACAAATTCGATTTCCGC+AGG | - | chr7_3:67674723-67674742 | None:intergenic | 35.0% | |
| GAAATTGCAACCGAAATTGT+CGG | + | chr7_3:67674743-67674762 | Msa1118910:CDS | 35.0% | |
| !! | TGATTTTGAGAGTGGAGTTA+AGG | + | chr7_3:67674893-67674912 | Msa1118910:CDS | 35.0% |
| !! | GATTTTGAGAGTGGAGTTAA+GGG | + | chr7_3:67674894-67674913 | Msa1118910:CDS | 35.0% |
| !! | GTTTTTGGGAAGGTTTGAAA+GGG | + | chr7_3:67674928-67674947 | Msa1118910:CDS | 35.0% |
| !! | TTTTTGGGAAGGTTTGAAAG+GGG | + | chr7_3:67674929-67674948 | Msa1118910:CDS | 35.0% |
| ! | CTCGTTTTCAAAACCCTAAT+TGG | - | chr7_3:67674996-67675015 | None:intergenic | 35.0% |
| !!! | CAATTAGGGTTTTGAAAACG+AGG | + | chr7_3:67674994-67675013 | Msa1118910:CDS | 35.0% |
| !! | TCTGTGCATTCTTTTGTTTC+CGG | + | chr7_3:67675162-67675181 | Msa1118910:intron | 35.0% |
| CGACACTAATACACAATTCA+AGG | - | chr7_3:67675482-67675501 | None:intergenic | 35.0% | |
| TGATAGCTAATTAGTGTCCA+AGG | - | chr7_3:67675597-67675616 | None:intergenic | 35.0% | |
| !!! | CTGATGCTTGTTTTAACGAA+TGG | + | chr7_3:67675664-67675683 | Msa1118910:intron | 35.0% |
| ! | AAACAATTGGTTCCATGAGA+AGG | + | chr7_3:67676445-67676464 | Msa1118910:intron | 35.0% |
| GGATTATATCATCCTTCTCA+TGG | - | chr7_3:67676460-67676479 | None:intergenic | 35.0% | |
| ! | ACCTTGCTTTGAATGTTGAA+TGG | + | chr7_3:67676530-67676549 | Msa1118910:intron | 35.0% |
| TCCATTCAACATTCAAAGCA+AGG | - | chr7_3:67676534-67676553 | None:intergenic | 35.0% | |
| CCTACTTTGTTAAACAGTCT+GGG | + | chr7_3:67676620-67676639 | Msa1118910:CDS | 35.0% | |
| TTGAGAGTCAAAGAAGAAGA+GGG | - | chr7_3:67676853-67676872 | None:intergenic | 35.0% | |
| ATATCTTTGCAGTTAACTCC+TGG | + | chr7_3:67676927-67676946 | Msa1118910:intron | 35.0% | |
| TTGAAAACAATGTCTATGCC+AGG | - | chr7_3:67676948-67676967 | None:intergenic | 35.0% | |
| ! | GTTGTTTGAAACCATTGCAT+TGG | - | chr7_3:67677000-67677019 | None:intergenic | 35.0% |
| GAGACGATACAAAGCAATAT+TGG | + | chr7_3:67677094-67677113 | Msa1118910:intron | 35.0% | |
| TCAACTGTTGGATTATGTAG+AGG | + | chr7_3:67677530-67677549 | Msa1118910:intron | 35.0% | |
| CAACTGTTGGATTATGTAGA+GGG | + | chr7_3:67677531-67677550 | Msa1118910:intron | 35.0% | |
| AACTGTTGGATTATGTAGAG+GGG | + | chr7_3:67677532-67677551 | Msa1118910:intron | 35.0% | |
| GGAGTTTACAAATCTACCAT+TGG | + | chr7_3:67677553-67677572 | Msa1118910:intron | 35.0% | |
| GGGAAAATTTATATGCGAGA+CGG | - | chr7_3:67677599-67677618 | None:intergenic | 35.0% | |
| CATTAATGTTTGTGAGTAGG+CGG | + | chr7_3:67677685-67677704 | Msa1118910:intron | 35.0% | |
| AAAGAGACTGCAGTAGAAAT+TGG | - | chr7_3:67677867-67677886 | None:intergenic | 35.0% | |
| TGCAACATGTCTTTCATTGT+TGG | - | chr7_3:67678025-67678044 | None:intergenic | 35.0% | |
| AAATATGCAGCTCGAAATAG+TGG | - | chr7_3:67678096-67678115 | None:intergenic | 35.0% | |
| AGGAAGGTTATATACGTAAC+TGG | + | chr7_3:67678223-67678242 | Msa1118910:CDS | 35.0% | |
| !! | TTATATACGTAACTGGCTTG+AGG | + | chr7_3:67678230-67678249 | Msa1118910:CDS | 35.0% |
| !!! | TGAGGAAAGGATTGGTTTTA+AGG | + | chr7_3:67678248-67678267 | Msa1118910:CDS | 35.0% |
| TATCAGAAAGTTACCTTTCC+AGG | - | chr7_3:67678297-67678316 | None:intergenic | 35.0% | |
| CTTTCTGATATTGTTAGCTG+TGG | + | chr7_3:67678307-67678326 | Msa1118910:intron | 35.0% | |
| TCTTAATTGGCTGTGCTTAT+AGG | - | chr7_3:67678357-67678376 | None:intergenic | 35.0% | |
| ! | AGAAGGACAAAGTGTTAGAA+TGG | - | chr7_3:67678544-67678563 | None:intergenic | 35.0% |
| TTCTAACACTTTGTCCTTCT+CGG | + | chr7_3:67678544-67678563 | Msa1118910:intron | 35.0% | |
| !! | AAATTGAGAAGTATCTCCAG+CGG | - | chr7_3:67678604-67678623 | None:intergenic | 35.0% |
| CTTCTCAATTTATACCATCC+AGG | + | chr7_3:67678613-67678632 | Msa1118910:CDS | 35.0% | |
| ! | AAGAACCAGAGCATTTGAAT+TGG | + | chr7_3:67678658-67678677 | Msa1118910:CDS | 35.0% |
| TGATACCAATTCAAATGCTC+TGG | - | chr7_3:67678666-67678685 | None:intergenic | 35.0% | |
| TACATCAAGAGGGAGAAAAA+CGG | + | chr7_3:67678753-67678772 | Msa1118910:CDS | 35.0% | |
| TTGTGAAACACATCAACAAC+TGG | + | chr7_3:67678793-67678812 | Msa1118910:CDS | 35.0% | |
| TGTGAAACACATCAACAACT+GGG | + | chr7_3:67678794-67678813 | Msa1118910:CDS | 35.0% | |
| AGAGAACTGAACAAGACAAA+AGG | + | chr7_3:67678957-67678976 | Msa1118910:intron | 35.0% | |
| GAGAACTGAACAAGACAAAA+GGG | + | chr7_3:67678958-67678977 | Msa1118910:intron | 35.0% | |
| AGAAATGATTGCTGAAGAGA+GGG | + | chr7_3:67679097-67679116 | Msa1118910:CDS | 35.0% | |
| ACAAATGGGGCATATTTCTT+GGG | + | chr7_3:67679140-67679159 | Msa1118910:CDS | 35.0% | |
| ATTTCTTGGGAAAGATGGTA+TGG | + | chr7_3:67679153-67679172 | Msa1118910:CDS | 35.0% | |
| TTTCTTGGGAAAGATGGTAT+GGG | + | chr7_3:67679154-67679173 | Msa1118910:CDS | 35.0% | |
| ! | GGCTTCAAGTTAGATGTATT+CGG | + | chr7_3:67679233-67679252 | Msa1118910:CDS | 35.0% |
| ! | GCTTCAAGTTAGATGTATTC+GGG | + | chr7_3:67679234-67679253 | Msa1118910:CDS | 35.0% |
| AAGTTAGATGTATTCGGGAA+TGG | + | chr7_3:67679239-67679258 | Msa1118910:CDS | 35.0% | |
| ! | AGTTTGTTTCAGAACCATGT+GGG | - | chr7_3:67679412-67679431 | None:intergenic | 35.0% |
| !! | TAGTTTGTTTCAGAACCATG+TGG | - | chr7_3:67679413-67679432 | None:intergenic | 35.0% |
| CAATTATCATGTGTAGGTGA+AGG | - | chr7_3:67679591-67679610 | None:intergenic | 35.0% | |
| ! | CAAGTTCTGTATTAGTGGAT+GGG | - | chr7_3:67679629-67679648 | None:intergenic | 35.0% |
| ACAAGTTCTGTATTAGTGGA+TGG | - | chr7_3:67679630-67679649 | None:intergenic | 35.0% | |
| GGAAACAAGTTCTGTATTAG+TGG | - | chr7_3:67679634-67679653 | None:intergenic | 35.0% | |
| ! | ACTTTTGCTACAAAGTCTTC+AGG | - | chr7_3:67679860-67679879 | None:intergenic | 35.0% |
| GAAAGCTGATATCTTTGTTC+AGG | - | chr7_3:67679920-67679939 | None:intergenic | 35.0% | |
| AGCTGCAACTCAAAGATTTA+TGG | + | chr7_3:67679946-67679965 | Msa1118910:CDS | 35.0% | |
| TCAAATCCTGAACAAGGAAA+AGG | + | chr7_3:67679985-67680004 | Msa1118910:CDS | 35.0% | |
| !! | TCTGCTAGTTCTGAAAGATT+AGG | - | chr7_3:67680067-67680086 | None:intergenic | 35.0% |
| AATCTTTCAGAACTAGCAGA+TGG | + | chr7_3:67680067-67680086 | Msa1118910:CDS | 35.0% | |
| TCTATTTACCAGCCATAGAT+AGG | - | chr7_3:67680229-67680248 | None:intergenic | 35.0% | |
| TGTTCATTGATGTAACTCGT+AGG | + | chr7_3:67680543-67680562 | Msa1118910:three_prime_UTR | 35.0% | |
| GAAGATGATGATTGCGACTT+GGG | - | chr7_3:67674416-67674435 | None:intergenic | 40.0% | |
| AGAAGATGATGATTGCGACT+TGG | - | chr7_3:67674417-67674436 | None:intergenic | 40.0% | |
| !! | CAAACTCATTTCGCTTTTCG+TGG | + | chr7_3:67674452-67674471 | Msa1118910:five_prime_UTR | 40.0% |
| CTTCTTACTAAAATCCGGAG+AGG | - | chr7_3:67674787-67674806 | None:intergenic | 40.0% | |
| !! | CTCTCCGGATTTTAGTAAGA+AGG | + | chr7_3:67674785-67674804 | Msa1118910:CDS | 40.0% |
| !!! | GTAAGAAGGTTTTGGAGAAG+TGG | + | chr7_3:67674799-67674818 | Msa1118910:CDS | 40.0% |
| GATTAAGAACGCGATTGTGT+CGG | + | chr7_3:67674857-67674876 | Msa1118910:CDS | 40.0% | |
| !!! | GGGTTTGTTGATTTTGAGAG+TGG | + | chr7_3:67674885-67674904 | Msa1118910:CDS | 40.0% |
| !! | GGTTTTTGGGAAGGTTTGAA+AGG | + | chr7_3:67674927-67674946 | Msa1118910:CDS | 40.0% |
| TGAAGGTGAGAGTGAAACTA+GGG | + | chr7_3:67674962-67674981 | Msa1118910:CDS | 40.0% | |
| !! | GAGAAGCGTAGTTCTTTTGA+TGG | + | chr7_3:67675029-67675048 | Msa1118910:CDS | 40.0% |
| ! | TTCCTCCTTTCACACTTTTC+TGG | + | chr7_3:67675106-67675125 | Msa1118910:intron | 40.0% |
| ! | AACCAGAAAAGTGTGAAAGG+AGG | - | chr7_3:67675111-67675130 | None:intergenic | 40.0% |
| AACTTAAGCACATGTGTCAG+TGG | - | chr7_3:67675246-67675265 | None:intergenic | 40.0% | |
| TTGTGTATTAGTGTCGTGTC+TGG | + | chr7_3:67675486-67675505 | Msa1118910:intron | 40.0% | |
| CAAATCGACTAGAGACACTT+CGG | - | chr7_3:67675763-67675782 | None:intergenic | 40.0% | |
| !! | AGTGTCTCTAGTCGATTTGT+TGG | + | chr7_3:67675764-67675783 | Msa1118910:intron | 40.0% |
| !! | TCTCTAGTCGATTTGTTGGT+TGG | + | chr7_3:67675768-67675787 | Msa1118910:intron | 40.0% |
| CAAAGAACCTGAAGAGTCAA+AGG | + | chr7_3:67676028-67676047 | Msa1118910:CDS | 40.0% | |
| ATACACACCTTTGACTCTTC+AGG | - | chr7_3:67676038-67676057 | None:intergenic | 40.0% | |
| AAGCAAAACTTGTACCTAGG+TGG | + | chr7_3:67676147-67676166 | Msa1118910:intron | 40.0% | |
| AAAACTTGTACCTAGGTGGA+AGG | + | chr7_3:67676151-67676170 | Msa1118910:intron | 40.0% | |
| GAATTTACAACCTTCCACCT+AGG | - | chr7_3:67676164-67676183 | None:intergenic | 40.0% | |
| GGTATCAAATGCAAGCGTTA+TGG | - | chr7_3:67676194-67676213 | None:intergenic | 40.0% | |
| TTGACATCGGAACAATTAGC+TGG | + | chr7_3:67676340-67676359 | Msa1118910:intron | 40.0% | |
| TGACATCGGAACAATTAGCT+GGG | + | chr7_3:67676341-67676360 | Msa1118910:intron | 40.0% | |
| ATTCATGTGTCATGCTTGAG+TGG | - | chr7_3:67676416-67676435 | None:intergenic | 40.0% | |
| ! | CATTTCCAGACATCTTTTCC+AGG | + | chr7_3:67676564-67676583 | Msa1118910:intron | 40.0% |
| AACAAAGTAGGCCAGAAGTT+CGG | - | chr7_3:67676611-67676630 | None:intergenic | 40.0% | |
| GCCTACTTTGTTAAACAGTC+TGG | + | chr7_3:67676619-67676638 | Msa1118910:CDS | 40.0% | |
| CCCAGACTGTTTAACAAAGT+AGG | - | chr7_3:67676623-67676642 | None:intergenic | 40.0% | |
| !! | TAAACAGTCTGGGCCATTTT+TGG | + | chr7_3:67676630-67676649 | Msa1118910:CDS | 40.0% |
| !!! | GGGCCATTTTTGGATCAAAT+TGG | + | chr7_3:67676640-67676659 | Msa1118910:CDS | 40.0% |
| ATATGTAAAGCGGGAAAGCA+GGG | - | chr7_3:67676727-67676746 | None:intergenic | 40.0% | |
| GTTGAGAGTCAAAGAAGAAG+AGG | - | chr7_3:67676854-67676873 | None:intergenic | 40.0% | |
| GAAGAGTAACAAGATGGTCT+TGG | - | chr7_3:67677376-67677395 | None:intergenic | 40.0% | |
| TTTCTACTGCAGTCTCTTTC+TGG | + | chr7_3:67677868-67677887 | Msa1118910:CDS | 40.0% | |
| TGGACAAATCATGCTTTGCT+TGG | - | chr7_3:67678005-67678024 | None:intergenic | 40.0% | |
| AAAACAGAAAGTCACTCTGC+TGG | + | chr7_3:67678128-67678147 | Msa1118910:CDS | 40.0% | |
| GAAGTAAAAGTGAGGTTGCT+GGG | - | chr7_3:67678192-67678211 | None:intergenic | 40.0% | |
| TGAAGTAAAAGTGAGGTTGC+TGG | - | chr7_3:67678193-67678212 | None:intergenic | 40.0% | |
| TGTACCACGTAAGAATTGCT+TGG | + | chr7_3:67678479-67678498 | Msa1118910:intron | 40.0% | |
| TCTAACACTTTGTCCTTCTC+GGG | + | chr7_3:67678545-67678564 | Msa1118910:intron | 40.0% | |
| TTTGAAAACTACACCCGAGA+AGG | - | chr7_3:67678561-67678580 | None:intergenic | 40.0% | |
| ! | TTCTCGGGTGTAGTTTTCAA+AGG | + | chr7_3:67678560-67678579 | Msa1118910:intron | 40.0% |
| !! | AATTGAGAAGTATCTCCAGC+GGG | - | chr7_3:67678603-67678622 | None:intergenic | 40.0% |
| ACATCAAGAGGGAGAAAAAC+GGG | + | chr7_3:67678754-67678773 | Msa1118910:CDS | 40.0% | |
| ! | TACAAGAGCGTACTGTGATA+AGG | + | chr7_3:67678818-67678837 | Msa1118910:CDS | 40.0% |
| GAGAAATGATTGCTGAAGAG+AGG | + | chr7_3:67679096-67679115 | Msa1118910:CDS | 40.0% | |
| CACAAATGGGGCATATTTCT+TGG | + | chr7_3:67679139-67679158 | Msa1118910:CDS | 40.0% | |
| GGCATATTTCTTGGGAAAGA+TGG | + | chr7_3:67679148-67679167 | Msa1118910:CDS | 40.0% | |
| CATCTAACTTGAAGCCATCA+AGG | - | chr7_3:67679229-67679248 | None:intergenic | 40.0% | |
| GTTTGTTTCAGAACCATGTG+GGG | - | chr7_3:67679411-67679430 | None:intergenic | 40.0% | |
| ATGAAGATAGGACGCAATGA+AGG | - | chr7_3:67679493-67679512 | None:intergenic | 40.0% | |
| TATCTTTGTTCAGGTGTGAG+AGG | - | chr7_3:67679911-67679930 | None:intergenic | 40.0% | |
| GCTTGATCAAATCCTGAACA+AGG | + | chr7_3:67679979-67679998 | Msa1118910:CDS | 40.0% | |
| ATCCTGAACAAGGAAAAGGA+TGG | + | chr7_3:67679989-67680008 | Msa1118910:CDS | 40.0% | |
| AGAGATAAGGGAAAGCTCAT+TGG | + | chr7_3:67680025-67680044 | Msa1118910:CDS | 40.0% | |
| TTTGCTCACTATTGTCTCAC+AGG | + | chr7_3:67680100-67680119 | Msa1118910:CDS | 40.0% | |
| TTGCTCACTATTGTCTCACA+GGG | + | chr7_3:67680101-67680120 | Msa1118910:CDS | 40.0% | |
| GAGTTCCTGAGATTATGTAC+CGG | + | chr7_3:67680127-67680146 | Msa1118910:CDS | 40.0% | |
| ! | CAATGCTGCTTGTCATTATC+TGG | - | chr7_3:67680291-67680310 | None:intergenic | 40.0% |
| ! | CATTAGCGTGTTGTGTGTTT+TGG | - | chr7_3:67680491-67680510 | None:intergenic | 40.0% |
| TGGCTGCGTTCGTTTCTATT+TGG | - | chr7_3:67674491-67674510 | None:intergenic | 45.0% | |
| AATAGAAACGAACGCAGCCA+TGG | + | chr7_3:67674491-67674510 | Msa1118910:exon | 45.0% | |
| !! | ATGAAGGAGAAAGCGCTTGA+AGG | - | chr7_3:67674531-67674550 | None:intergenic | 45.0% |
| GCTTTCTCCTTCATCTCCAA+AGG | + | chr7_3:67674537-67674556 | Msa1118910:CDS | 45.0% | |
| TCTCCTTCATCTCCAAAGGT+TGG | + | chr7_3:67674541-67674560 | Msa1118910:CDS | 45.0% | |
| TTTCTTCAATTCTGCCGCAC+CGG | + | chr7_3:67674665-67674684 | Msa1118910:CDS | 45.0% | |
| ACAAATTCGATTTCCGCAGG+CGG | - | chr7_3:67674720-67674739 | None:intergenic | 45.0% | |
| CGTCGAATCTCCGACAATTT+CGG | - | chr7_3:67674756-67674775 | None:intergenic | 45.0% | |
| TCAATCCGAATCTTCGCTCT+CGG | - | chr7_3:67674828-67674847 | None:intergenic | 45.0% | |
| TTGAGAGTGGAGTTAAGGGA+AGG | + | chr7_3:67674898-67674917 | Msa1118910:CDS | 45.0% | |
| ! | AGGGAAGGAGGTTAGGTTTT+TGG | + | chr7_3:67674913-67674932 | Msa1118910:CDS | 45.0% |
| ! | GGGAAGGAGGTTAGGTTTTT+GGG | + | chr7_3:67674914-67674933 | Msa1118910:CDS | 45.0% |
| !! | AGGAGGTTAGGTTTTTGGGA+AGG | + | chr7_3:67674918-67674937 | Msa1118910:CDS | 45.0% |
| GTGAAGGTGAGAGTGAAACT+AGG | + | chr7_3:67674961-67674980 | Msa1118910:CDS | 45.0% | |
| TGAGAGTGAAACTAGGGACT+GGG | + | chr7_3:67674968-67674987 | Msa1118910:CDS | 45.0% | |
| TAGGGACTGGGAACCAATTA+GGG | + | chr7_3:67674980-67674999 | Msa1118910:CDS | 45.0% | |
| TTTATGTCCAAAGGGGCCTA+AGG | - | chr7_3:67676251-67676270 | None:intergenic | 45.0% | |
| CACTTCCTGGAAAAGATGTC+TGG | - | chr7_3:67676572-67676591 | None:intergenic | 45.0% | |
| ACAAAGTAGGCCAGAAGTTC+GGG | - | chr7_3:67676610-67676629 | None:intergenic | 45.0% | |
| GATCAAATTGGAGTCGGCAA+AGG | + | chr7_3:67676652-67676671 | Msa1118910:CDS | 45.0% | |
| TATGTAAAGCGGGAAAGCAG+GGG | - | chr7_3:67676726-67676745 | None:intergenic | 45.0% | |
| GATATGTAAAGCGGGAAAGC+AGG | - | chr7_3:67676728-67676747 | None:intergenic | 45.0% | |
| ! | GAAGAGGGTGAGCTAACTTT+TGG | - | chr7_3:67676838-67676857 | None:intergenic | 45.0% |
| TCCAAAGTCCACCTTCATAC+CGG | - | chr7_3:67677978-67677997 | None:intergenic | 45.0% | |
| !! | GGTTCCATGGCTTTGTGAAT+CGG | + | chr7_3:67678149-67678168 | Msa1118910:CDS | 45.0% |
| TGATCCGATTCACAAAGCCA+TGG | - | chr7_3:67678156-67678175 | None:intergenic | 45.0% | |
| !! | ATGGCTTTGTGAATCGGATC+AGG | + | chr7_3:67678155-67678174 | Msa1118910:CDS | 45.0% |
| CCTCAGGTGAAGTAAAAGTG+AGG | - | chr7_3:67678200-67678219 | None:intergenic | 45.0% | |
| !! | CCTCACTTTTACTTCACCTG+AGG | + | chr7_3:67678197-67678216 | Msa1118910:CDS | 45.0% |
| ! | TTTTACTTCACCTGAGGAGC+AGG | + | chr7_3:67678203-67678222 | Msa1118910:CDS | 45.0% |
| ATATAACCTTCCTGCTCCTC+AGG | - | chr7_3:67678216-67678235 | None:intergenic | 45.0% | |
| !! | TACGTAACTGGCTTGAGGAA+AGG | + | chr7_3:67678235-67678254 | Msa1118910:CDS | 45.0% |
| !! | AACTGGCTTGAGGAAAGGAT+TGG | + | chr7_3:67678240-67678259 | Msa1118910:CDS | 45.0% |
| GCTACCAAGCAATTCTTACG+TGG | - | chr7_3:67678486-67678505 | None:intergenic | 45.0% | |
| !! | TCAAATGCTCTGGTTCTTCC+AGG | - | chr7_3:67678656-67678675 | None:intergenic | 45.0% |
| TGTGCACAATGCCAACAACA+TGG | - | chr7_3:67678719-67678738 | None:intergenic | 45.0% | |
| CATCAAGAGGGAGAAAAACG+GGG | + | chr7_3:67678755-67678774 | Msa1118910:CDS | 45.0% | |
| TGTGTTTCACAAAGAACGCC+TGG | - | chr7_3:67678785-67678804 | None:intergenic | 45.0% | |
| TATGCAGGTTCTTCGTCTCT+CGG | + | chr7_3:67679001-67679020 | Msa1118910:intron | 45.0% | |
| GGCAGAAGGCTTTCACAAAT+GGG | + | chr7_3:67679126-67679145 | Msa1118910:CDS | 45.0% | |
| GCAGAAGGCTTTCACAAATG+GGG | + | chr7_3:67679127-67679146 | Msa1118910:CDS | 45.0% | |
| GGAAAGATGGTATGGGCAAA+GGG | + | chr7_3:67679161-67679180 | Msa1118910:CDS | 45.0% | |
| GGTATGGGCAAAGGGATATA+AGG | + | chr7_3:67679169-67679188 | Msa1118910:CDS | 45.0% | |
| AGATGTATTCGGGAATGGAG+AGG | + | chr7_3:67679244-67679263 | Msa1118910:CDS | 45.0% | |
| AAGTTCAGAGTGCAGCTAGA+AGG | + | chr7_3:67679276-67679295 | Msa1118910:CDS | 45.0% | |
| ACGCAGATGATTCTCTTCAC+AGG | + | chr7_3:67679336-67679355 | Msa1118910:CDS | 45.0% | |
| TCATTGGAAGATTCCCCACA+TGG | + | chr7_3:67679395-67679414 | Msa1118910:intron | 45.0% | |
| GACGTGAAGAACTCGTTTGA+TGG | - | chr7_3:67679809-67679828 | None:intergenic | 45.0% | |
| TGTTCAGGTGTGAGAGGATA+AGG | - | chr7_3:67679905-67679924 | None:intergenic | 45.0% | |
| ! | CACCATCCTTTTCCTTGTTC+AGG | - | chr7_3:67679994-67680013 | None:intergenic | 45.0% |
| CTTTCAGAACTAGCAGATGG+AGG | + | chr7_3:67680070-67680089 | Msa1118910:CDS | 45.0% | |
| TTCCTGAGATTATGTACCGG+AGG | + | chr7_3:67680130-67680149 | Msa1118910:CDS | 45.0% | |
| TTCCTCCGGTACATAATCTC+AGG | - | chr7_3:67680135-67680154 | None:intergenic | 45.0% | |
| TTGTCATAAACACGTGTCCC+GGG | - | chr7_3:67680160-67680179 | None:intergenic | 45.0% | |
| CTTGTCATAAACACGTGTCC+CGG | - | chr7_3:67680161-67680180 | None:intergenic | 45.0% | |
| AGATAGGACTTTCCACCTGT+GGG | - | chr7_3:67680213-67680232 | None:intergenic | 45.0% | |
| TAGATAGGACTTTCCACCTG+TGG | - | chr7_3:67680214-67680233 | None:intergenic | 45.0% | |
| CAGGTGGAAAGTCCTATCTA+TGG | + | chr7_3:67680214-67680233 | Msa1118910:CDS | 45.0% | |
| TGGAAAGTCCTATCTATGGC+TGG | + | chr7_3:67680218-67680237 | Msa1118910:CDS | 45.0% | |
| !! | AAGGAGAAAGCGCTTGAAGG+TGG | - | chr7_3:67674528-67674547 | None:intergenic | 50.0% |
| AGTTCGTGATTCAGCAGACG+CGG | + | chr7_3:67674569-67674588 | Msa1118910:CDS | 50.0% | |
| ATTCTCGAGTTCACGGTCGA+AGG | - | chr7_3:67674646-67674665 | None:intergenic | 50.0% | |
| TAAGAACGCGATTGTGTCGG+AGG | + | chr7_3:67674860-67674879 | Msa1118910:CDS | 50.0% | |
| AGAGTGGAGTTAAGGGAAGG+AGG | + | chr7_3:67674901-67674920 | Msa1118910:CDS | 50.0% | |
| GGAGTTAAGGGAAGGAGGTT+AGG | + | chr7_3:67674906-67674925 | Msa1118910:CDS | 50.0% | |
| TGGGAAGGTTTGAAAGGGGA+AGG | + | chr7_3:67674933-67674952 | Msa1118910:CDS | 50.0% | |
| GGTTTGAAAGGGGAAGGTGA+AGG | + | chr7_3:67674939-67674958 | Msa1118910:CDS | 50.0% | |
| AAAGGGGAAGGTGAAGGTGA+AGG | + | chr7_3:67674945-67674964 | Msa1118910:CDS | 50.0% | |
| GTGAGAGTGAAACTAGGGAC+TGG | + | chr7_3:67674967-67674986 | Msa1118910:CDS | 50.0% | |
| CTAGGGACTGGGAACCAATT+AGG | + | chr7_3:67674979-67674998 | Msa1118910:CDS | 50.0% | |
| ! | TGCAGGTGCTACAAGACAAC+CGG | - | chr7_3:67675184-67675203 | None:intergenic | 50.0% |
| !! | ACTTCCGATGGAAGAGTGTC+TGG | + | chr7_3:67675203-67675222 | Msa1118910:intron | 50.0% |
| GACACCAGACACTCTTCCAT+CGG | - | chr7_3:67675210-67675229 | None:intergenic | 50.0% | |
| CCAGCTATGAAGCACAGACA+CGG | - | chr7_3:67675302-67675321 | None:intergenic | 50.0% | |
| ACACCAGTCCATGCATCCTT+AGG | + | chr7_3:67676232-67676251 | Msa1118910:intron | 50.0% | |
| AGAAGTTCGGGTACATCCAG+TGG | - | chr7_3:67676598-67676617 | None:intergenic | 50.0% | |
| ACTGGATGTACCCGAACTTC+TGG | + | chr7_3:67676597-67676616 | Msa1118910:CDS | 50.0% | |
| ! | AAGCTGCATCGACGATGGAA+AGG | - | chr7_3:67677718-67677737 | None:intergenic | 50.0% |
| ! | CTAGAAAGCTGCATCGACGA+TGG | - | chr7_3:67677723-67677742 | None:intergenic | 50.0% |
| CTAGTGTCCTTCAGAGCACA+GGG | + | chr7_3:67677950-67677969 | Msa1118910:CDS | 50.0% | |
| ! | ACCGGTATGAAGGTGGACTT+TGG | + | chr7_3:67677974-67677993 | Msa1118910:CDS | 50.0% |
| !! | TCACAACCGCTAGTCTTCCT+TGG | + | chr7_3:67678049-67678068 | Msa1118910:CDS | 50.0% |
| CGTCATCCAAGGAAGACTAG+CGG | - | chr7_3:67678058-67678077 | None:intergenic | 50.0% | |
| !! | CGCTAGTCTTCCTTGGATGA+CGG | + | chr7_3:67678056-67678075 | Msa1118910:CDS | 50.0% |
| !! | GCTAGTCTTCCTTGGATGAC+GGG | + | chr7_3:67678057-67678076 | Msa1118910:CDS | 50.0% |
| !! | AAGTCACTCTGCTGGTTCCA+TGG | + | chr7_3:67678136-67678155 | Msa1118910:CDS | 50.0% |
| GGCTGTGCTTATAGGCAATG+TGG | - | chr7_3:67678349-67678368 | None:intergenic | 50.0% | |
| AGACGTAGTATAATGCCCGC+TGG | + | chr7_3:67678585-67678604 | Msa1118910:CDS | 50.0% | |
| GATAGCAATGTCTGCATCCC+TGG | - | chr7_3:67678634-67678653 | None:intergenic | 50.0% | |
| GGATGCAGACATTGCTATCC+TGG | + | chr7_3:67678635-67678654 | Msa1118910:CDS | 50.0% | |
| ATTGCTGAAGAGAGGGAGCT+AGG | + | chr7_3:67679104-67679123 | Msa1118910:CDS | 50.0% | |
| TTGCTGAAGAGAGGGAGCTA+GGG | + | chr7_3:67679105-67679124 | Msa1118910:CDS | 50.0% | |
| GGGCAGAAGGCTTTCACAAA+TGG | + | chr7_3:67679125-67679144 | Msa1118910:CDS | 50.0% | |
| GGGAAAGATGGTATGGGCAA+AGG | + | chr7_3:67679160-67679179 | Msa1118910:CDS | 50.0% | |
| AAGCACAAGGCTGACCTTGA+TGG | + | chr7_3:67679212-67679231 | Msa1118910:CDS | 50.0% | |
| TCAGAGTGCAGCTAGAAGGT+TGG | + | chr7_3:67679280-67679299 | Msa1118910:CDS | 50.0% | |
| CACAGCACATCACTGATGCT+AGG | - | chr7_3:67679731-67679750 | None:intergenic | 50.0% | |
| TGATGTGCTGTGCACAGCTA+CGG | + | chr7_3:67679739-67679758 | Msa1118910:CDS | 50.0% | |
| TTATGTACCGGAGGAACACC+CGG | + | chr7_3:67680139-67680158 | Msa1118910:CDS | 50.0% | |
| ATAGGACTTTCCACCTGTGG+GGG | - | chr7_3:67680211-67680230 | None:intergenic | 50.0% | |
| GATAGGACTTTCCACCTGTG+GGG | - | chr7_3:67680212-67680231 | None:intergenic | 50.0% | |
| AGGTGGATGCTGTGTAGCCA+TGG | - | chr7_3:67674511-67674530 | None:intergenic | 55.0% | |
| ! | GCGCCAACCTTTGGAGATGA+AGG | - | chr7_3:67674547-67674566 | None:intergenic | 55.0% |
| ACGAACTTCGCGCCAACCTT+TGG | - | chr7_3:67674556-67674575 | None:intergenic | 55.0% | |
| ! | CACGGTCGAAGGAGTTTGCT+AGG | - | chr7_3:67674635-67674654 | None:intergenic | 55.0% |
| ATCGCCGGAACAGAAAACGC+CGG | - | chr7_3:67674687-67674706 | None:intergenic | 55.0% | |
| ! | CGTTTTCTGTTCCGGCGATG+AGG | + | chr7_3:67674688-67674707 | Msa1118910:CDS | 55.0% |
| AATTCGATTTCCGCAGGCGG+AGG | - | chr7_3:67674717-67674736 | None:intergenic | 55.0% | |
| AACGCGATTGTGTCGGAGGA+AGG | + | chr7_3:67674864-67674883 | Msa1118910:CDS | 55.0% | |
| ACGCGATTGTGTCGGAGGAA+GGG | + | chr7_3:67674865-67674884 | Msa1118910:CDS | 55.0% | |
| TGTAGCACCTGCACTTCCGA+TGG | + | chr7_3:67675191-67675210 | Msa1118910:intron | 55.0% | |
| ! | CACTCTTCCATCGGAAGTGC+AGG | - | chr7_3:67675201-67675220 | None:intergenic | 55.0% |
| CCGTGTCTGTGCTTCATAGC+TGG | + | chr7_3:67675299-67675318 | Msa1118910:intron | 55.0% | |
| CAAAGGGGCCTAAGGATGCA+TGG | - | chr7_3:67676243-67676262 | None:intergenic | 55.0% | |
| CATGCATCCTTAGGCCCCTT+TGG | + | chr7_3:67676241-67676260 | Msa1118910:intron | 55.0% | |
| AGTTCGGGTACATCCAGTGG+CGG | - | chr7_3:67676595-67676614 | None:intergenic | 55.0% | |
| GCTAGTGTCCTTCAGAGCAC+AGG | + | chr7_3:67677949-67677968 | Msa1118910:CDS | 55.0% | |
| ACTGCTGTTCCCGTCATCCA+AGG | - | chr7_3:67678069-67678088 | None:intergenic | 55.0% | |
| ACTTCACCTGAGGAGCAGGA+AGG | + | chr7_3:67678207-67678226 | Msa1118910:CDS | 55.0% | |
| GCAATGTCTGCATCCCTGGA+TGG | - | chr7_3:67678630-67678649 | None:intergenic | 55.0% | |
| ! | GGTATCATCATGGGAAGCGC+TGG | + | chr7_3:67678679-67678698 | Msa1118910:CDS | 55.0% |
| !! | TCATCATGGGAAGCGCTGGA+CGG | + | chr7_3:67678683-67678702 | Msa1118910:CDS | 55.0% |
| TATGTACCGGAGGAACACCC+GGG | + | chr7_3:67680140-67680159 | Msa1118910:CDS | 55.0% | |
| CCTGTGGGGGTAAGAGATGA+AGG | - | chr7_3:67680198-67680217 | None:intergenic | 55.0% | |
| CCTTCATCTCTTACCCCCAC+AGG | + | chr7_3:67680195-67680214 | Msa1118910:CDS | 55.0% | |
| TCATCTCTTACCCCCACAGG+TGG | + | chr7_3:67680198-67680217 | Msa1118910:CDS | 55.0% | |
| CGGAACAGAAAACGCCGGTG+CGG | - | chr7_3:67674682-67674701 | None:intergenic | 60.0% | |
| !! | CGCACCGGCGTTTTCTGTTC+CGG | + | chr7_3:67674680-67674699 | Msa1118910:CDS | 60.0% |
| TCGACGCGCTTACTCCTCTC+CGG | + | chr7_3:67674770-67674789 | Msa1118910:CDS | 60.0% | |
| GGACGCCGAGAGCGAAGATT+CGG | + | chr7_3:67674820-67674839 | Msa1118910:CDS | 60.0% | |
| GGGCCTAAGGATGCATGGAC+TGG | - | chr7_3:67676238-67676257 | None:intergenic | 60.0% | |
| !! | TTTCCAGGAAGTGCCGCCAC+TGG | + | chr7_3:67676579-67676598 | Msa1118910:intron | 60.0% |
| GAAAGCAGGGGCTGCATGCA+TGG | - | chr7_3:67676714-67676733 | None:intergenic | 60.0% | |
| TCCTTCAGAGCACAGGGCAC+CGG | + | chr7_3:67677956-67677975 | Msa1118910:CDS | 60.0% | |
| !! | AGCACAGGGCACCGGTATGA+AGG | + | chr7_3:67677964-67677983 | Msa1118910:CDS | 60.0% |
| !! | ACAGGGCACCGGTATGAAGG+TGG | + | chr7_3:67677967-67677986 | Msa1118910:CDS | 60.0% |
| ! | GGAGAAAAACGGGGCACTCC+AGG | + | chr7_3:67678764-67678783 | Msa1118910:CDS | 60.0% |
| TCGTCTCTCGGCTGCTACTC+AGG | + | chr7_3:67679013-67679032 | Msa1118910:CDS | 60.0% | |
| AGAGAGGGAGCTAGGGCAGA+AGG | + | chr7_3:67679112-67679131 | Msa1118910:CDS | 60.0% | |
| !! | TACGGCAGAGGCACTTGCCA+TGG | + | chr7_3:67679757-67679776 | Msa1118910:CDS | 60.0% |
| !! | ACGGCAGAGGCACTTGCCAT+GGG | + | chr7_3:67679758-67679777 | Msa1118910:CDS | 60.0% |
| GATGAGGTCTCCTCCGCCTG+CGG | + | chr7_3:67674704-67674723 | Msa1118910:CDS | 65.0% | |
| CATCCAGTGGCGGCACTTCC+TGG | - | chr7_3:67676585-67676604 | None:intergenic | 65.0% | |
| ACCGGTGCCCTGTGCTCTGA+AGG | - | chr7_3:67677960-67677979 | None:intergenic | 65.0% | |
| GCTGTGCACAGCTACGGCAG+AGG | + | chr7_3:67679745-67679764 | Msa1118910:CDS | 65.0% | |
| ACGTGTCCCGGGTGTTCCTC+CGG | - | chr7_3:67680149-67680168 | None:intergenic | 65.0% | |
| GGCGGAGGAGACCTCATCGC+CGG | - | chr7_3:67674702-67674721 | None:intergenic | 70.0% |
| Chromosome | Type | Strat | End | Strand | Name |
|---|---|---|---|---|---|
| chr7_3 | gene | 67674378 | 67680604 | 67674378 | ID=Msa1118910;Name=Msa1118910 |
| chr7_3 | mRNA | 67674378 | 67680604 | 67674378 | ID=Msa1118910-mRNA-1;Parent=Msa1118910;Name=Msa1118910-mRNA-1;_AED=0.04;_eAED=0.04;_QI=132|1|1|1|1|1|7|361|780 |
| chr7_3 | exon | 67674378 | 67675094 | 67674378 | ID=Msa1118910-mRNA-1:exon:16683;Parent=Msa1118910-mRNA-1 |
| chr7_3 | exon | 67676017 | 67676049 | 67676017 | ID=Msa1118910-mRNA-1:exon:16684;Parent=Msa1118910-mRNA-1 |
| chr7_3 | exon | 67676586 | 67676673 | 67676586 | ID=Msa1118910-mRNA-1:exon:16685;Parent=Msa1118910-mRNA-1 |
| chr7_3 | exon | 67677818 | 67678302 | 67677818 | ID=Msa1118910-mRNA-1:exon:16686;Parent=Msa1118910-mRNA-1 |
| chr7_3 | exon | 67678573 | 67678839 | 67678573 | ID=Msa1118910-mRNA-1:exon:16687;Parent=Msa1118910-mRNA-1 |
| chr7_3 | exon | 67679008 | 67679357 | 67679008 | ID=Msa1118910-mRNA-1:exon:16688;Parent=Msa1118910-mRNA-1 |
| chr7_3 | exon | 67679709 | 67680604 | 67679709 | ID=Msa1118910-mRNA-1:exon:16689;Parent=Msa1118910-mRNA-1 |
| chr7_3 | five_prime_UTR | 67674378 | 67674509 | 67674378 | ID=Msa1118910-mRNA-1:five_prime_utr;Parent=Msa1118910-mRNA-1 |
| chr7_3 | CDS | 67674510 | 67675094 | 67674510 | ID=Msa1118910-mRNA-1:cds;Parent=Msa1118910-mRNA-1 |
| chr7_3 | CDS | 67676017 | 67676049 | 67676017 | ID=Msa1118910-mRNA-1:cds;Parent=Msa1118910-mRNA-1 |
| chr7_3 | CDS | 67676586 | 67676673 | 67676586 | ID=Msa1118910-mRNA-1:cds;Parent=Msa1118910-mRNA-1 |
| chr7_3 | CDS | 67677818 | 67678302 | 67677818 | ID=Msa1118910-mRNA-1:cds;Parent=Msa1118910-mRNA-1 |
| chr7_3 | CDS | 67678573 | 67678839 | 67678573 | ID=Msa1118910-mRNA-1:cds;Parent=Msa1118910-mRNA-1 |
| chr7_3 | CDS | 67679008 | 67679357 | 67679008 | ID=Msa1118910-mRNA-1:cds;Parent=Msa1118910-mRNA-1 |
| chr7_3 | CDS | 67679709 | 67680243 | 67679709 | ID=Msa1118910-mRNA-1:cds;Parent=Msa1118910-mRNA-1 |
| chr7_3 | three_prime_UTR | 67680244 | 67680604 | 67680244 | ID=Msa1118910-mRNA-1:three_prime_utr;Parent=Msa1118910-mRNA-1 |
| Gene Sequence |
| Protein sequence |
