AlfalfaGEDB Alfalfa Gene Editing Database

M. sativa cultivar zhongmu-4 / Msa1331690

Query id Subject id identity % alignment length mismatches gap openings q. start q. end s. start s. end e-value bit score
Msa1331690 MtrunA17_Chr4g0061921 99.708 342 1 0 1 342 1 342 0.0 710
Msa1331690 MtrunA17_Chr3g0087171 28.065 310 182 9 18 326 17 286 1.09e-27 114
Msa1331690 MtrunA17_Chr8g0351491 24.281 313 169 12 26 332 14 264 6.32e-12 65.1
Query id Subject id identity % alignment length mismatches gap openings q. start q. end s. start s. end e-value bit score
Msa1331690 AT5G08160.1 83.573 347 52 2 1 342 1 347 0.0 609
Msa1331690 AT5G08160.2 78.426 343 41 2 1 342 1 311 0.0 551
Msa1331690 AT2G32850.2 29.393 313 179 11 27 337 26 298 1.62e-28 116
Msa1331690 AT2G32850.1 29.393 313 179 11 27 337 26 298 1.72e-28 116
Msa1331690 AT4G04710.4 27.037 270 140 13 33 295 41 260 5.71e-13 70.1
Msa1331690 AT4G04710.1 27.037 270 140 13 33 295 41 260 6.30e-13 70.1
Msa1331690 AT1G12680.1 25.581 301 165 12 32 332 111 352 1.69e-11 65.5
Msa1331690 AT2G45490.1 24.127 315 163 12 28 332 22 270 2.03e-11 64.3
Msa1331690 AT4G04710.2 26.400 250 128 12 33 275 41 241 3.31e-11 64.7

Find 121 sgRNAs with CRISPR-Local

Find 282 sgRNAs with CRISPR-GE


CRISPR-Local

CRISPR-Local
sgRNA_sequence on_target_score Position Region
CTTCTTGGCTTTCATTGTTT+TGG 0.155584 8_4:+51258896 None:intergenic
GGTGGAATAGTGTTCCTTCT+TGG 0.288284 8_4:+51258881 None:intergenic
CTTGTTATTTCCAGTTCATT+TGG 0.299548 8_4:-51258940 Msa1331690:CDS
CAGATGTTCTTCAAATATTT+CGG 0.304963 8_4:-51258857 Msa1331690:CDS
GAGCTAATCTTCTTCCTTGC+GGG 0.327554 8_4:+51258331 None:intergenic
GTCTCTTGTAATTTATGAAA+TGG 0.332989 8_4:-51256333 Msa1331690:three_prime_UTR
TCAAGAAGTGGGAGGAGATT+GGG 0.348271 8_4:+51259124 None:intergenic
CGGTACGAGAGCTCCTTTCT+TGG 0.351708 8_4:+51260652 None:intergenic
CATTTACAATAGCCAGTTGC+AGG 0.356717 8_4:+51256734 None:intergenic
CGCTTACGTTTATCTCGTTA+AGG 0.356987 8_4:-51260334 Msa1331690:CDS
CAACTGGAGTGCCTCTGATC+TGG 0.364109 8_4:+51258309 None:intergenic
TTTGATTAATGAAATATGTT+TGG 0.375357 8_4:+51260513 None:intergenic
ATCAGAGGCACTCCAGTTGC+AGG 0.377493 8_4:-51258305 Msa1331690:intron
TGGATCTTATGCTATGAAAA+AGG 0.382382 8_4:-51259218 Msa1331690:CDS
CTTGGGCAATCCCACAGCTC+AGG 0.394165 8_4:+51257803 None:intergenic
CACCTTCTCCGAGCTGTCTC+AGG 0.397192 8_4:+51260361 None:intergenic
GGATAATGATATCGTCTATC+CGG 0.398152 8_4:+51256614 None:intergenic
GAAATAACAAGTACGCTTCA+TGG 0.400033 8_4:+51258952 None:intergenic
ACGAACTGATGAAGAGCTTC+TGG 0.403819 8_4:+51256673 None:intergenic
ACGAGCAGCTGGAGTTGGTC+AGG 0.404228 8_4:-51259180 Msa1331690:CDS
TCCGGGGCCTCATAGCAGCT+TGG 0.408265 8_4:+51256632 None:intergenic
TCAACCGACGACGTGAAATC+AGG 0.416104 8_4:-51260573 Msa1331690:five_prime_UTR
CTGGCCATACTGATGGATTT+CGG 0.418247 8_4:-51258364 Msa1331690:CDS
ATCAAGAAGTGGGAGGAGAT+TGG 0.424760 8_4:+51259123 None:intergenic
TGAACGGAGGTGGTGATGTT+TGG 0.427535 8_4:-51260407 Msa1331690:CDS
TTGACATCATTGTGAGCATA+AGG 0.430332 8_4:+51258430 None:intergenic
ATCATATAATGCATTTAAAC+CGG 0.431617 8_4:+51260434 None:intergenic
TCATGCAATCATATCTGTTA+AGG 0.433133 8_4:-51259101 Msa1331690:intron
CCACCGGTAGCAGAGTCATT+AGG 0.436423 8_4:+51260306 None:intergenic
CGTCTATATCAGCATGGCTT+GGG 0.443772 8_4:+51257786 None:intergenic
AATCCCACAGCTCAGGGGCT+CGG 0.444654 8_4:+51257810 None:intergenic
AAGAATGAATCACCTGCAAC+TGG 0.444808 8_4:+51258293 None:intergenic
GTCTGGTGGAAGCCTGCAAC+TGG 0.446847 8_4:-51256746 Msa1331690:CDS
AGTAGACACACACATGTGTT+TGG 0.447137 8_4:-51260691 Msa1331690:five_prime_UTR
TGAGGAAAACACAGGGAGAT+TGG 0.447172 8_4:+51256310 None:intergenic
TTGGTGTTAGTCTAGATAGT+CGG 0.450088 8_4:-51256401 Msa1331690:three_prime_UTR
TTGTAAATGCTCAGGTCAAA+TGG 0.451429 8_4:-51256720 Msa1331690:CDS
TTGGGCAATCCCACAGCTCA+GGG 0.451475 8_4:+51257804 None:intergenic
TTATTTCCAGTTCATTTGGA+TGG 0.458073 8_4:-51258936 Msa1331690:CDS
CAGAAAAGGACAACCACCAC+TGG 0.459960 8_4:-51258383 Msa1331690:CDS
GAATATGCACTTGGAGAGTC+TGG 0.460612 8_4:-51256763 Msa1331690:CDS
AGTCTAGATAGTCGGGCGTT+GGG 0.462024 8_4:-51256393 Msa1331690:three_prime_UTR
TGGTGTTAGTCTAGATAGTC+GGG 0.463365 8_4:-51256400 Msa1331690:three_prime_UTR
AGGACTGACGTTTGGTCACT+AGG 0.464707 8_4:-51257761 Msa1331690:CDS
CTTTCCGAGCCCCTGAGCTG+TGG 0.468523 8_4:-51257814 Msa1331690:CDS
AATGTTCCATCCAAATGAAC+TGG 0.469154 8_4:+51258930 None:intergenic
CTCCGAGCTGTCTCAGGATG+CGG 0.473746 8_4:+51260367 None:intergenic
CATTCAGAACAACGAGCAGC+TGG 0.475734 8_4:-51259191 Msa1331690:CDS
CAAGAAGTGGGAGGAGATTG+GGG 0.480551 8_4:+51259125 None:intergenic
TAGTCTAGATAGTCGGGCGT+TGG 0.482517 8_4:-51256394 Msa1331690:three_prime_UTR
ACTGCCGAAATCCATCAGTA+TGG 0.483500 8_4:+51258360 None:intergenic
CCCAAGCTGCTATGAGGCCC+CGG 0.483526 8_4:-51256633 Msa1331690:CDS
ATATGTTTGGCACTGAAATC+AGG 0.484033 8_4:+51260526 None:intergenic
GCTCAGGTCAAATGGCCAGC+TGG 0.486173 8_4:-51256712 Msa1331690:CDS
TCGTCTATATCAGCATGGCT+TGG 0.489078 8_4:+51257785 None:intergenic
AAAATGGGTTGCTCATTCTC+CGG 0.492235 8_4:-51260453 Msa1331690:CDS
TTTCCGAGCCCCTGAGCTGT+GGG 0.494385 8_4:-51257813 Msa1331690:CDS
TGAAGAGCTTCTGGATATGA+AGG 0.497130 8_4:+51256682 None:intergenic
GAACAACGAGCAGCTGGAGT+TGG 0.499688 8_4:-51259185 Msa1331690:CDS
TAGACGAGAGGACTGACGTT+TGG 0.506638 8_4:-51257769 Msa1331690:CDS
TTCAGCCCCAAGCTGCTATG+AGG 0.508302 8_4:-51256639 Msa1331690:CDS
TGTTCTTCAAATATTTCGGC+AGG 0.511807 8_4:-51258853 Msa1331690:intron
GCAAACAGAGTGAGAAATAG+AGG 0.515649 8_4:-51260488 Msa1331690:five_prime_UTR
GTTCTCATAACACACAGAAA+AGG 0.516035 8_4:-51258397 Msa1331690:CDS
ACCACCACTGGCCATACTGA+TGG 0.518489 8_4:-51258371 Msa1331690:CDS
ACTGGCTATTGTAAATGCTC+AGG 0.518915 8_4:-51256728 Msa1331690:CDS
CTCTTCATCAGTTCGTGTCA+TGG 0.519184 8_4:-51256666 Msa1331690:CDS
GATAATGATATCGTCTATCC+GGG 0.519411 8_4:+51256615 None:intergenic
AGCCTACTCAAGAAACATCT+TGG 0.522960 8_4:-51258977 Msa1331690:CDS
CTCAATGAGTTATCATCGTA+GGG 0.525641 8_4:-51256564 Msa1331690:exon
AAAATCGAGCGATCCAAGAA+AGG 0.529945 8_4:-51260665 Msa1331690:five_prime_UTR
GGAGCTAATCTTCTTCCTTG+CGG 0.539998 8_4:+51258330 None:intergenic
CAAAACAATGAAAGCCAAGA+AGG 0.541448 8_4:-51258895 Msa1331690:CDS
TCTCAATGAGTTATCATCGT+AGG 0.547768 8_4:-51256565 Msa1331690:exon
ATCCTGAGACAGCTCGGAGA+AGG 0.549306 8_4:-51260363 Msa1331690:CDS
TCTCCAAGTGCATATTCAAA+CGG 0.554376 8_4:+51256769 None:intergenic
TATGAAGGTTTAAGTCCAGC+TGG 0.554831 8_4:+51256697 None:intergenic
GCATTATATGATTCTGTGAA+CGG 0.557472 8_4:-51260423 Msa1331690:CDS
TCAACTCAACAGCTTTGTGC+AGG 0.560174 8_4:-51258481 Msa1331690:intron
CTGAGACAGCTCGGAGAAGG+TGG 0.561482 8_4:-51260360 Msa1331690:CDS
AAATAACAAGTACGCTTCAT+GGG 0.562791 8_4:+51258953 None:intergenic
CGGGGCCTCATAGCAGCTTG+GGG 0.569578 8_4:+51256634 None:intergenic
AAAGACTCTTCTCATCTCGC+AGG 0.571736 8_4:-51260267 Msa1331690:intron
TCTCCGTTTGAATATGCACT+TGG 0.573973 8_4:-51256772 Msa1331690:CDS
TTCCGCATCCTGAGACAGCT+CGG 0.579735 8_4:-51260369 Msa1331690:CDS
CGAGCAGCTGGAGTTGGTCA+GGG 0.581004 8_4:-51259179 Msa1331690:CDS
TATGATTCTGTGAACGGAGG+TGG 0.581095 8_4:-51260417 Msa1331690:CDS
TGGGCAATCCCACAGCTCAG+GGG 0.583786 8_4:+51257805 None:intergenic
AAGACCTGATTTCACGTCGT+CGG 0.586470 8_4:+51260569 None:intergenic
GCTGCTCGTTGTTCTGAATG+AGG 0.586598 8_4:+51259194 None:intergenic
GTCCAAGATGTTTCTTGAGT+AGG 0.586917 8_4:+51258975 None:intergenic
GCTCCTAATGACTCTGCTAC+CGG 0.588613 8_4:-51260309 Msa1331690:CDS
GAGCTTATTAGCGAGACCAC+CGG 0.590187 8_4:+51260290 None:intergenic
ATGATTGCATGATCAAGAAG+TGG 0.592500 8_4:+51259112 None:intergenic
TGTGTTATGAGAACATTACC+AGG 0.596220 8_4:+51258406 None:intergenic
GCTCACAATGATGTCAAACC+TGG 0.597206 8_4:-51258424 Msa1331690:CDS
ATTTATGCGCATAAAATCTG+AGG 0.600665 8_4:+51256292 None:intergenic
TCGGCAGTGCTCGTCCCGCA+AGG 0.607074 8_4:-51258345 Msa1331690:CDS
AGATACGTTTAACTCTGTGT+GGG 0.607297 8_4:+51256450 None:intergenic
TCCTCTCGTCTATATCAGCA+TGG 0.609546 8_4:+51257780 None:intergenic
TCCATCAGTATGGCCAGTGG+TGG 0.622023 8_4:+51258370 None:intergenic
TGATTGCATGATCAAGAAGT+GGG 0.623676 8_4:+51259113 None:intergenic
GAAGATTAGCTCCAGATCAG+AGG 0.625557 8_4:-51258320 Msa1331690:CDS
CAGATACGTTTAACTCTGTG+TGG 0.625824 8_4:+51256449 None:intergenic
ATAAAATCTGAGGAAAACAC+AGG 0.631492 8_4:+51256302 None:intergenic
ACATCATTGTGAGCATAAGG+AGG 0.631567 8_4:+51258433 None:intergenic
TTGCAATCAACTTATCAACA+TGG 0.641794 8_4:+51256593 None:intergenic
TCGTAGGGAACAGTGTGGCA+TGG 0.643236 8_4:-51256549 Msa1331690:three_prime_UTR
TATTTGAAGAACATCTGAGG+TGG 0.650365 8_4:+51258863 None:intergenic
GCCATGCTGATATAGACGAG+AGG 0.653519 8_4:-51257781 Msa1331690:CDS
AAATATTTGAAGAACATCTG+AGG 0.664166 8_4:+51258860 None:intergenic
GCAGCTGGAGTTGGTCAGGG+AGG 0.666966 8_4:-51259176 Msa1331690:CDS
TATGCACTTGGAGAGTCTGG+TGG 0.682888 8_4:-51256760 Msa1331690:CDS
GACTAAACAGTGAAGAGACG+CGG 0.691998 8_4:+51259149 None:intergenic
TTGCATGATCAAGAAGTGGG+AGG 0.694089 8_4:+51259116 None:intergenic
AAATCCATCAGTATGGCCAG+TGG 0.697664 8_4:+51258367 None:intergenic
GATACGTTTAACTCTGTGTG+GGG 0.698364 8_4:+51256451 None:intergenic
TAAAATCTGAGGAAAACACA+GGG 0.713588 8_4:+51256303 None:intergenic
ATAATGATATCGTCTATCCG+GGG 0.742304 8_4:+51256616 None:intergenic
TTATATGATTCTGTGAACGG+AGG 0.782200 8_4:-51260420 Msa1331690:CDS
TATCATCGTAGGGAACAGTG+TGG 0.794948 8_4:-51256554 Msa1331690:three_prime_UTR

CRISPR-GE

badsite warning sgRNA_sequence Strand Position Region GC_content
!!! TTATAAATATATCACATTTT+GGG - chr8_4:51258801-51258820 Msa1331690:intron 10.0%
!!! CATTTTTATTTATTACGATA+CGG + chr8_4:51256337-51256356 None:intergenic 15.0%
!! TTTGATTAATGAAATATGTT+TGG + chr8_4:51256456-51256475 None:intergenic 15.0%
!!! TGTTTTTAAATGAATATAGA+TGG - chr8_4:51257108-51257127 Msa1331690:intron 15.0%
!!! TTATAATATCTTTTTTCATC+AGG - chr8_4:51258169-51258188 Msa1331690:intron 15.0%
!!! TATAATATCTTTTTTCATCA+GGG - chr8_4:51258170-51258189 Msa1331690:intron 15.0%
!! ATTTACAAACACTAAAAAAA+AGG + chr8_4:51258699-51258718 None:intergenic 15.0%
!!! CTTATAAATATATCACATTT+TGG - chr8_4:51258800-51258819 Msa1331690:intron 15.0%
!!! CAAAGAAATTTAGTTTTAAA+TGG + chr8_4:51258957-51258976 None:intergenic 15.0%
!! AAATATATGAAAAACAATAC+TGG + chr8_4:51259467-51259486 None:intergenic 15.0%
!!! AGTATTGTTTTTCATATATT+TGG - chr8_4:51259466-51259485 Msa1331690:intron 15.0%
!!! TATGCATATATTATTGTTTT+GGG - chr8_4:51259843-51259862 Msa1331690:intron 15.0%
!! ATCATATAATGCATTTAAAC+CGG + chr8_4:51256535-51256554 None:intergenic 20.0%
!! CACATCTTAACAATTAAAAA+TGG + chr8_4:51256741-51256760 None:intergenic 20.0%
!!! AGCTTAATTTTGATAATAAG+TGG - chr8_4:51257020-51257039 Msa1331690:intron 20.0%
!!! TGATTTATGTTTGAATGTTT+TGG - chr8_4:51257272-51257291 Msa1331690:intron 20.0%
!!! ATAATATCTTTTTTCATCAG+GGG - chr8_4:51258171-51258190 Msa1331690:intron 20.0%
!! AATCATTTGTACAAAAAGAA+TGG - chr8_4:51258345-51258364 Msa1331690:CDS 20.0%
!! ACAATTTCACATAATACAAA+TGG + chr8_4:51258849-51258868 None:intergenic 20.0%
!! ATTTCTTAATTTACATTACC+TGG - chr8_4:51258922-51258941 Msa1331690:CDS 20.0%
!!! TTTTAAAATTTACACGAAAC+TGG + chr8_4:51259024-51259043 None:intergenic 20.0%
!! TATAAAATAAGAGAAAGGAA+GGG - chr8_4:51259607-51259626 Msa1331690:intron 20.0%
!!! CTATGCATATATTATTGTTT+TGG - chr8_4:51259842-51259861 Msa1331690:intron 20.0%
!!! ATGCATATATTATTGTTTTG+GGG - chr8_4:51259844-51259863 Msa1331690:intron 20.0%
!! TGATTCTTTATTAATTCATG+TGG - chr8_4:51260148-51260167 Msa1331690:intron 20.0%
!!! TTTTTTTCTCTTTTCGTTTT+TGG - chr8_4:51260546-51260565 Msa1331690:five_prime_UTR 20.0%
! ACAATTAAAAATGGATCGAA+AGG + chr8_4:51256732-51256751 None:intergenic 25.0%
!! TAGCAATTTTGAATTGACAT+TGG - chr8_4:51257204-51257223 Msa1331690:intron 25.0%
!! TCGTTAAGTAGAATCAATTT+TGG + chr8_4:51257460-51257479 None:intergenic 25.0%
! AAATATTTGAAGAACATCTG+AGG + chr8_4:51258109-51258128 None:intergenic 25.0%
! CAGATGTTCTTCAAATATTT+CGG - chr8_4:51258109-51258128 Msa1331690:intron 25.0%
! TGACTATAATAAGGTCTAAA+CGG + chr8_4:51258250-51258269 None:intergenic 25.0%
! AACCAAGAATGACTATAATA+AGG + chr8_4:51258259-51258278 None:intergenic 25.0%
!! TTTTGTACAAATGATTCTCA+AGG + chr8_4:51258341-51258360 None:intergenic 25.0%
! CTAAAATCTCAAAAAGAACA+TGG + chr8_4:51258402-51258421 None:intergenic 25.0%
!! TTGATTTTACGAGGTTAAAA+GGG + chr8_4:51258469-51258488 None:intergenic 25.0%
!! GAAAAAGAAAAGCTTCTTTT+CGG - chr8_4:51259048-51259067 Msa1331690:intron 25.0%
! ACATTATATGCAATAATGTG+AGG - chr8_4:51259232-51259251 Msa1331690:intron 25.0%
!!! TTAGCAATGGATTGAAATTT+AGG - chr8_4:51259398-51259417 Msa1331690:intron 25.0%
! TAGCCTATAAAATAAGAGAA+AGG - chr8_4:51259602-51259621 Msa1331690:intron 25.0%
!!! CTTCCTTTCTCTTATTTTAT+AGG + chr8_4:51259608-51259627 None:intergenic 25.0%
! CTATAAAATAAGAGAAAGGA+AGG - chr8_4:51259606-51259625 Msa1331690:intron 25.0%
! AAATCAAGCAATAATTCCAA+GGG + chr8_4:51259969-51259988 None:intergenic 25.0%
! AAAAATTATCCCAACTCTAT+TGG + chr8_4:51260008-51260027 None:intergenic 25.0%
!! CTTTTAGATATATAACTGGA+CGG + chr8_4:51260479-51260498 None:intergenic 25.0%
!!! ACTGCTTTTAGATATATAAC+TGG + chr8_4:51260483-51260502 None:intergenic 25.0%
! GTCTCTTGTAATTTATGAAA+TGG - chr8_4:51260633-51260652 Msa1331690:five_prime_UTR 25.0%
!! GGTCTTTGAAAATCACTTTT+TGG - chr8_4:51256414-51256433 Msa1331690:three_prime_UTR 30.0%
AGGATCTGAAGAAGAAAAAT+GGG - chr8_4:51256498-51256517 Msa1331690:three_prime_UTR 30.0%
GCATTATATGATTCTGTGAA+CGG - chr8_4:51256543-51256562 Msa1331690:three_prime_UTR 30.0%
TTCAACAAATGACATAGATC+AGG + chr8_4:51256770-51256789 None:intergenic 30.0%
AAAATTCAGCTTCACAAGAT+CGG + chr8_4:51256844-51256863 None:intergenic 30.0%
! AGTGATTTTGTGATTAGACT+CGG - chr8_4:51256920-51256939 Msa1331690:intron 30.0%
! TGATGATGCTAATTGATAAC+AGG - chr8_4:51256964-51256983 Msa1331690:intron 30.0%
TCTTAGTTACTACAGCAAAA+TGG + chr8_4:51257060-51257079 None:intergenic 30.0%
! AGTGATGAAAAGTAGCTTTT+GGG + chr8_4:51257337-51257356 None:intergenic 30.0%
! AAGTGATGAAAAGTAGCTTT+TGG + chr8_4:51257338-51257357 None:intergenic 30.0%
GTCAAAATTACTGACATGTT+TGG - chr8_4:51257406-51257425 Msa1331690:intron 30.0%
GATTCATTCATGTAAAAGTG+AGG + chr8_4:51257539-51257558 None:intergenic 30.0%
AAATGTAAAGTGACATGGTT+TGG + chr8_4:51257561-51257580 None:intergenic 30.0%
GAGTAAAATGTAAAGTGACA+TGG + chr8_4:51257566-51257585 None:intergenic 30.0%
! TGATCTTTTGTGTGTATGTT+TGG + chr8_4:51257653-51257672 None:intergenic 30.0%
ACACAAAAGATCAATTCTGA+TGG - chr8_4:51257660-51257679 Msa1331690:intron 30.0%
TGGATCTTATGCTATGAAAA+AGG - chr8_4:51257748-51257767 Msa1331690:CDS 30.0%
TCATGCAATCATATCTGTTA+AGG - chr8_4:51257865-51257884 Msa1331690:intron 30.0%
AAATAACAAGTACGCTTCAT+GGG + chr8_4:51258016-51258035 None:intergenic 30.0%
!! CTTGTTATTTCCAGTTCATT+TGG - chr8_4:51258026-51258045 Msa1331690:intron 30.0%
TTATTTCCAGTTCATTTGGA+TGG - chr8_4:51258030-51258049 Msa1331690:intron 30.0%
GACCTTATTATAGTCATTCT+TGG - chr8_4:51258254-51258273 Msa1331690:intron 30.0%
TAATTCATGACATGAGACTT+GGG - chr8_4:51258306-51258325 Msa1331690:CDS 30.0%
! ACAAAAAGAATGGATTTCTC+TGG - chr8_4:51258355-51258374 Msa1331690:CDS 30.0%
!! GTTGATTTTACGAGGTTAAA+AGG + chr8_4:51258470-51258489 None:intergenic 30.0%
TGAAATTGTATTGCCTAATG+TGG - chr8_4:51258860-51258879 Msa1331690:CDS 30.0%
TTTAAATGGAATGTAAGACC+AGG + chr8_4:51258943-51258962 None:intergenic 30.0%
! CTTTGCTTGTGATTTCTTTT+TGG - chr8_4:51258972-51258991 Msa1331690:CDS 30.0%
AGGATCAATATGCACATTAA+GGG + chr8_4:51259373-51259392 None:intergenic 30.0%
TATGAAAAACAATACTGGCA+GGG + chr8_4:51259462-51259481 None:intergenic 30.0%
ATATGAAAAACAATACTGGC+AGG + chr8_4:51259463-51259482 None:intergenic 30.0%
TATATGTTGTTCACATGTCT+GGG - chr8_4:51259489-51259508 Msa1331690:intron 30.0%
ACAATTTGAATTAGTGACTC+TGG + chr8_4:51259725-51259744 None:intergenic 30.0%
! GCTATTGGATTTTATTCACA+TGG + chr8_4:51259900-51259919 None:intergenic 30.0%
AAACTTCTATGCAAAGCTAT+TGG + chr8_4:51259915-51259934 None:intergenic 30.0%
CAAATCAAGCAATAATTCCA+AGG + chr8_4:51259970-51259989 None:intergenic 30.0%
CTTGGAATTATTGCTTGATT+TGG - chr8_4:51259968-51259987 Msa1331690:intron 30.0%
AACAGAAATCCAATAGAGTT+GGG - chr8_4:51259996-51260015 Msa1331690:intron 30.0%
! TTCATGTGGCTAAAATTTTC+AGG - chr8_4:51260162-51260181 Msa1331690:intron 30.0%
!!! TGGCTAAAATTTTCAGGTAT+GGG - chr8_4:51260168-51260187 Msa1331690:intron 30.0%
TTGCAATCAACTTATCAACA+TGG + chr8_4:51260376-51260395 None:intergenic 30.0%
TAAAATCTGAGGAAAACACA+GGG + chr8_4:51260666-51260685 None:intergenic 30.0%
ATAAAATCTGAGGAAAACAC+AGG + chr8_4:51260667-51260686 None:intergenic 30.0%
ATTTATGCGCATAAAATCTG+AGG + chr8_4:51260677-51260696 None:intergenic 30.0%
! TCAGATTTTATGCGCATAAA+TGG - chr8_4:51260676-51260695 Msa1331690:five_prime_UTR 30.0%
! CAGATTTTATGCGCATAAAT+GGG - chr8_4:51260677-51260696 Msa1331690:five_prime_UTR 30.0%
! ATATGTTTGGCACTGAAATC+AGG + chr8_4:51256443-51256462 None:intergenic 35.0%
GAGGATCTGAAGAAGAAAAA+TGG - chr8_4:51256497-51256516 Msa1331690:three_prime_UTR 35.0%
TTATATGATTCTGTGAACGG+AGG - chr8_4:51256546-51256565 Msa1331690:three_prime_UTR 35.0%
!!! GCTCTTGTTATTGCGTTTTA+TGG - chr8_4:51256894-51256913 Msa1331690:intron 35.0%
! GTGATGAAAAGTAGCTTTTG+GGG + chr8_4:51257336-51257355 None:intergenic 35.0%
! ATGTTTGGTTTCACTTCCAA+AGG - chr8_4:51257382-51257401 Msa1331690:intron 35.0%
!!! GTCAGTAATTTTGACTCCTT+TGG + chr8_4:51257401-51257420 None:intergenic 35.0%
! TTGTGTGTTTGATTTCACAG+TGG + chr8_4:51257689-51257708 None:intergenic 35.0%
TGATTGCATGATCAAGAAGT+GGG + chr8_4:51257856-51257875 None:intergenic 35.0%
ATGATTGCATGATCAAGAAG+TGG + chr8_4:51257857-51257876 None:intergenic 35.0%
GAAATAACAAGTACGCTTCA+TGG + chr8_4:51258017-51258036 None:intergenic 35.0%
AATGTTCCATCCAAATGAAC+TGG + chr8_4:51258039-51258058 None:intergenic 35.0%
!! CTTCTTGGCTTTCATTGTTT+TGG + chr8_4:51258073-51258092 None:intergenic 35.0%
CAAAACAATGAAAGCCAAGA+AGG - chr8_4:51258071-51258090 Msa1331690:intron 35.0%
TATTTGAAGAACATCTGAGG+TGG + chr8_4:51258106-51258125 None:intergenic 35.0%
TGTTCTTCAAATATTTCGGC+AGG - chr8_4:51258113-51258132 Msa1331690:intron 35.0%
!!! ATATCTTTTTTCATCAGGGG+AGG - chr8_4:51258174-51258193 Msa1331690:intron 35.0%
!!! TATCTTTTTTCATCAGGGGA+GGG - chr8_4:51258175-51258194 Msa1331690:intron 35.0%
AATTGCAAAAGTGATGCTTG+AGG + chr8_4:51258211-51258230 None:intergenic 35.0%
GTAATTCATGACATGAGACT+TGG - chr8_4:51258305-51258324 Msa1331690:intron 35.0%
TTGACATCATTGTGAGCATA+AGG + chr8_4:51258539-51258558 None:intergenic 35.0%
TGTGTTATGAGAACATTACC+AGG + chr8_4:51258563-51258582 None:intergenic 35.0%
GTTCTCATAACACACAGAAA+AGG - chr8_4:51258569-51258588 Msa1331690:intron 35.0%
TGACACAACACAAAAATGTG+TGG - chr8_4:51258775-51258794 Msa1331690:intron 35.0%
ATTGTATTGCCTAATGTGGT+AGG - chr8_4:51258864-51258883 Msa1331690:CDS 35.0%
! TTGTCTTGCTATGTAGGAAT+GGG - chr8_4:51259108-51259127 Msa1331690:CDS 35.0%
CAGGATCAATATGCACATTA+AGG + chr8_4:51259374-51259393 None:intergenic 35.0%
ATGAAAAACAATACTGGCAG+GGG + chr8_4:51259461-51259480 None:intergenic 35.0%
GTATATGTTGTTCACATGTC+TGG - chr8_4:51259488-51259507 Msa1331690:intron 35.0%
! TCTCATCCACAAGAACATTT+TGG + chr8_4:51259648-51259667 None:intergenic 35.0%
CAACAGAAATCCAATAGAGT+TGG - chr8_4:51259995-51260014 Msa1331690:intron 35.0%
!! TTCAAGCAAGAGGTATTTGA+TGG + chr8_4:51260077-51260096 None:intergenic 35.0%
!! GATAGTTGTTTTCAAGCAAG+AGG + chr8_4:51260087-51260106 None:intergenic 35.0%
CTTGCTTGAAAACAACTATC+TGG - chr8_4:51260087-51260106 Msa1331690:intron 35.0%
!!! GTGGCTAAAATTTTCAGGTA+TGG - chr8_4:51260167-51260186 Msa1331690:intron 35.0%
!!! GGCTAAAATTTTCAGGTATG+GGG - chr8_4:51260169-51260188 Msa1331690:intron 35.0%
TCTCCAAGTGCATATTCAAA+CGG + chr8_4:51260200-51260219 None:intergenic 35.0%
TTGTAAATGCTCAGGTCAAA+TGG - chr8_4:51260246-51260265 Msa1331690:intron 35.0%
ATAATGATATCGTCTATCCG+GGG + chr8_4:51260353-51260372 None:intergenic 35.0%
GATAATGATATCGTCTATCC+GGG + chr8_4:51260354-51260373 None:intergenic 35.0%
GGATAATGATATCGTCTATC+CGG + chr8_4:51260355-51260374 None:intergenic 35.0%
TCTCAATGAGTTATCATCGT+AGG - chr8_4:51260401-51260420 Msa1331690:CDS 35.0%
CTCAATGAGTTATCATCGTA+GGG - chr8_4:51260402-51260421 Msa1331690:CDS 35.0%
AGATACGTTTAACTCTGTGT+GGG + chr8_4:51260519-51260538 None:intergenic 35.0%
!! TTGGTGTTAGTCTAGATAGT+CGG - chr8_4:51260565-51260584 Msa1331690:five_prime_UTR 35.0%
AGTAGACACACACATGTGTT+TGG - chr8_4:51256275-51256294 Msa1331690:three_prime_UTR 40.0%
AAAATCGAGCGATCCAAGAA+AGG - chr8_4:51256301-51256320 Msa1331690:three_prime_UTR 40.0%
GCAAACAGAGTGAGAAATAG+AGG - chr8_4:51256478-51256497 Msa1331690:three_prime_UTR 40.0%
!! AAAATGGGTTGCTCATTCTC+CGG - chr8_4:51256513-51256532 Msa1331690:three_prime_UTR 40.0%
CGCTTACGTTTATCTCGTTA+AGG - chr8_4:51256632-51256651 Msa1331690:CDS 40.0%
CATCACTTCTACTCAAACCA+AGG - chr8_4:51257350-51257369 Msa1331690:intron 40.0%
CCAAACATCTTTCGAAACCT+TGG + chr8_4:51257370-51257389 None:intergenic 40.0%
CCAAGGTTTCGAAAGATGTT+TGG - chr8_4:51257367-51257386 Msa1331690:intron 40.0%
!! TGTGTGTATGTTTGGTTCTG+CGG + chr8_4:51257645-51257664 None:intergenic 40.0%
TGTCTCTTATCTGCAGATGA+TGG - chr8_4:51257728-51257747 Msa1331690:intron 40.0%
! GTAGAATGTGTCCCTTTTGT+TGG - chr8_4:51257965-51257984 Msa1331690:intron 40.0%
AGCCTACTCAAGAAACATCT+TGG - chr8_4:51257989-51258008 Msa1331690:intron 40.0%
GTCCAAGATGTTTCTTGAGT+AGG + chr8_4:51257994-51258013 None:intergenic 40.0%
!!! GCTGTTGAGTTGATTTTACG+AGG + chr8_4:51258478-51258497 None:intergenic 40.0%
ACATCATTGTGAGCATAAGG+AGG + chr8_4:51258536-51258555 None:intergenic 40.0%
AAGAATGAATCACCTGCAAC+TGG + chr8_4:51258676-51258695 None:intergenic 40.0%
TAGGTGCATATGCATCATCA+AGG - chr8_4:51258883-51258902 Msa1331690:CDS 40.0%
! TTCTTTTCGGTCATCTAGCT+TGG - chr8_4:51259061-51259080 Msa1331690:intron 40.0%
TTCCTACATAGCAAGACAAG+TGG + chr8_4:51259107-51259126 None:intergenic 40.0%
! CTTGTCTTGCTATGTAGGAA+TGG - chr8_4:51259107-51259126 Msa1331690:CDS 40.0%
! GTGCCTTCATAACCACATTT+TGG - chr8_4:51259309-51259328 Msa1331690:intron 40.0%
GGACCAAAATGTGGTTATGA+AGG + chr8_4:51259315-51259334 None:intergenic 40.0%
AAGGGTTTAGATCAAGTGCA+TGG + chr8_4:51259355-51259374 None:intergenic 40.0%
TTGATCCTGCAAGTTAGCAA+TGG - chr8_4:51259385-51259404 Msa1331690:intron 40.0%
! TCAATCCATTGCTAACTTGC+AGG + chr8_4:51259393-51259412 None:intergenic 40.0%
!! CCACAAGAACATTTTGGTCA+GGG + chr8_4:51259642-51259661 None:intergenic 40.0%
!! TCCACAAGAACATTTTGGTC+AGG + chr8_4:51259643-51259662 None:intergenic 40.0%
TTGTGGATGAGATGTCAAGA+GGG - chr8_4:51259656-51259675 Msa1331690:intron 40.0%
TTTACTGATGCCCATGCTAT+TGG - chr8_4:51259815-51259834 Msa1331690:intron 40.0%
GCATAGTGATCCAATAGCAT+GGG + chr8_4:51259828-51259847 None:intergenic 40.0%
TGCATAGTGATCCAATAGCA+TGG + chr8_4:51259829-51259848 None:intergenic 40.0%
CCTCAAGAGTCAAGAAAACA+CGG + chr8_4:51259940-51259959 None:intergenic 40.0%
! CGTGTTTTCTTGACTCTTGA+GGG - chr8_4:51259938-51259957 Msa1331690:intron 40.0%
! GAGGTATTTGATGGTACTGA+TGG + chr8_4:51260068-51260087 None:intergenic 40.0%
TCTCCGTTTGAATATGCACT+TGG - chr8_4:51260194-51260213 Msa1331690:intron 40.0%
CATTTACAATAGCCAGTTGC+AGG + chr8_4:51260235-51260254 None:intergenic 40.0%
ACTGGCTATTGTAAATGCTC+AGG - chr8_4:51260238-51260257 Msa1331690:intron 40.0%
TATGAAGGTTTAAGTCCAGC+TGG + chr8_4:51260272-51260291 None:intergenic 40.0%
TGAAGAGCTTCTGGATATGA+AGG + chr8_4:51260287-51260306 None:intergenic 40.0%
GATACGTTTAACTCTGTGTG+GGG + chr8_4:51260518-51260537 None:intergenic 40.0%
CAGATACGTTTAACTCTGTG+TGG + chr8_4:51260520-51260539 None:intergenic 40.0%
! TGGTGTTAGTCTAGATAGTC+GGG - chr8_4:51260566-51260585 Msa1331690:five_prime_UTR 40.0%
AAGACCTGATTTCACGTCGT+CGG + chr8_4:51256400-51256419 None:intergenic 45.0%
TATGATTCTGTGAACGGAGG+TGG - chr8_4:51256549-51256568 Msa1331690:three_prime_UTR 45.0%
AAAGACTCTTCTCATCTCGC+AGG - chr8_4:51256699-51256718 Msa1331690:CDS 45.0%
CACACACACACAGAGATACA+CGG + chr8_4:51257146-51257165 None:intergenic 45.0%
GACTAAACAGTGAAGAGACG+CGG + chr8_4:51257820-51257839 None:intergenic 45.0%
TCAAGAAGTGGGAGGAGATT+GGG + chr8_4:51257845-51257864 None:intergenic 45.0%
ATCAAGAAGTGGGAGGAGAT+TGG + chr8_4:51257846-51257865 None:intergenic 45.0%
TTGCATGATCAAGAAGTGGG+AGG + chr8_4:51257853-51257872 None:intergenic 45.0%
! AGCAGGAAAGGTGTAAGTGT+TGG + chr8_4:51257912-51257931 None:intergenic 45.0%
TACACCTTTCCTGCTTAGCT+CGG - chr8_4:51257917-51257936 Msa1331690:intron 45.0%
TGAGTAGGCTGCCAACAAAA+GGG + chr8_4:51257979-51257998 None:intergenic 45.0%
TTGAGTAGGCTGCCAACAAA+AGG + chr8_4:51257980-51257999 None:intergenic 45.0%
GGTGGAATAGTGTTCCTTCT+TGG + chr8_4:51258088-51258107 None:intergenic 45.0%
! TCAACTCAACAGCTTTGTGC+AGG - chr8_4:51258485-51258504 Msa1331690:intron 45.0%
GCTCACAATGATGTCAAACC+TGG - chr8_4:51258542-51258561 Msa1331690:intron 45.0%
AAATCCATCAGTATGGCCAG+TGG + chr8_4:51258602-51258621 None:intergenic 45.0%
!! CTGGCCATACTGATGGATTT+CGG - chr8_4:51258602-51258621 Msa1331690:intron 45.0%
ACTGCCGAAATCCATCAGTA+TGG + chr8_4:51258609-51258628 None:intergenic 45.0%
GAGCTAATCTTCTTCCTTGC+GGG + chr8_4:51258638-51258657 None:intergenic 45.0%
GGAGCTAATCTTCTTCCTTG+CGG + chr8_4:51258639-51258658 None:intergenic 45.0%
! GAAGATTAGCTCCAGATCAG+AGG - chr8_4:51258646-51258665 Msa1331690:intron 45.0%
AGAACTTCCACTTGCAGAAC+TGG - chr8_4:51258746-51258765 Msa1331690:intron 45.0%
ACAGAAACCAGTTCTGCAAG+TGG + chr8_4:51258756-51258775 None:intergenic 45.0%
GCATATGCACCTACCACATT+AGG + chr8_4:51258876-51258895 None:intergenic 45.0%
GTGCATATGCATCATCAAGG+TGG - chr8_4:51258886-51258905 Msa1331690:CDS 45.0%
! CTAGCTTGGATTTTCTGACC+TGG - chr8_4:51259075-51259094 Msa1331690:intron 45.0%
! TGCCACTTGTCTTGCTATGT+AGG - chr8_4:51259102-51259121 Msa1331690:CDS 45.0%
CGTCTATATCAGCATGGCTT+GGG + chr8_4:51259183-51259202 None:intergenic 45.0%
TCGTCTATATCAGCATGGCT+TGG + chr8_4:51259184-51259203 None:intergenic 45.0%
TCCTCTCGTCTATATCAGCA+TGG + chr8_4:51259189-51259208 None:intergenic 45.0%
AGGAGTTGAGGACCAAAATG+TGG + chr8_4:51259324-51259343 None:intergenic 45.0%
ATGGCACATATGAGGAGTTG+AGG + chr8_4:51259336-51259355 None:intergenic 45.0%
TCAAGTGCATGGCACATATG+AGG + chr8_4:51259344-51259363 None:intergenic 45.0%
CCCTGACCAAAATGTTCTTG+TGG - chr8_4:51259639-51259658 Msa1331690:intron 45.0%
CTTGTGGATGAGATGTCAAG+AGG - chr8_4:51259655-51259674 Msa1331690:intron 45.0%
!! TCTGGCTCTTAAGTAGGACT+TGG + chr8_4:51259707-51259726 None:intergenic 45.0%
!! AGTGACTCTGGCTCTTAAGT+AGG + chr8_4:51259713-51259732 None:intergenic 45.0%
! CCGTGTTTTCTTGACTCTTG+AGG - chr8_4:51259937-51259956 Msa1331690:intron 45.0%
GAATATGCACTTGGAGAGTC+TGG - chr8_4:51260203-51260222 Msa1331690:intron 45.0%
ACGAACTGATGAAGAGCTTC+TGG + chr8_4:51260296-51260315 None:intergenic 45.0%
CTCTTCATCAGTTCGTGTCA+TGG - chr8_4:51260300-51260319 Msa1331690:CDS 45.0%
TATCATCGTAGGGAACAGTG+TGG - chr8_4:51260412-51260431 Msa1331690:CDS 45.0%
TGAGGAAAACACAGGGAGAT+TGG + chr8_4:51260659-51260678 None:intergenic 45.0%
TCAACCGACGACGTGAAATC+AGG - chr8_4:51256393-51256412 Msa1331690:three_prime_UTR 50.0%
! TGAACGGAGGTGGTGATGTT+TGG - chr8_4:51256559-51256578 Msa1331690:three_prime_UTR 50.0%
GCTCCTAATGACTCTGCTAC+CGG - chr8_4:51256657-51256676 Msa1331690:CDS 50.0%
GAGCTTATTAGCGAGACCAC+CGG + chr8_4:51256679-51256698 None:intergenic 50.0%
! AGACTCGGTAAAGCTCGTGT+TGG - chr8_4:51256935-51256954 Msa1331690:intron 50.0%
! GCTGCTCGTTGTTCTGAATG+AGG + chr8_4:51257775-51257794 None:intergenic 50.0%
CATTCAGAACAACGAGCAGC+TGG - chr8_4:51257775-51257794 Msa1331690:CDS 50.0%
CAAGAAGTGGGAGGAGATTG+GGG + chr8_4:51257844-51257863 None:intergenic 50.0%
! AAAAGCATGCCGAGCTAAGC+AGG + chr8_4:51257929-51257948 None:intergenic 50.0%
CAGAAAAGGACAACCACCAC+TGG - chr8_4:51258583-51258602 Msa1331690:intron 50.0%
CAAGACAAGTGGCAAACACC+AGG + chr8_4:51259096-51259115 None:intergenic 50.0%
GCCATGCTGATATAGACGAG+AGG - chr8_4:51259185-51259204 Msa1331690:CDS 50.0%
TAGACGAGAGGACTGACGTT+TGG - chr8_4:51259197-51259216 Msa1331690:CDS 50.0%
AGGACTGACGTTTGGTCACT+AGG - chr8_4:51259205-51259224 Msa1331690:CDS 50.0%
TGTTCACATGTCTGGGTGTG+AGG - chr8_4:51259496-51259515 Msa1331690:intron 50.0%
TATGCACTTGGAGAGTCTGG+TGG - chr8_4:51260206-51260225 Msa1331690:intron 50.0%
TAGTCTAGATAGTCGGGCGT+TGG - chr8_4:51260572-51260591 Msa1331690:five_prime_UTR 50.0%
AGTCTAGATAGTCGGGCGTT+GGG - chr8_4:51260573-51260592 Msa1331690:five_prime_UTR 50.0%
CGGTACGAGAGCTCCTTTCT+TGG + chr8_4:51256317-51256336 None:intergenic 55.0%
TTCCGCATCCTGAGACAGCT+CGG - chr8_4:51256597-51256616 Msa1331690:CDS 55.0%
ATCCTGAGACAGCTCGGAGA+AGG - chr8_4:51256603-51256622 Msa1331690:CDS 55.0%
CCACCGGTAGCAGAGTCATT+AGG + chr8_4:51256663-51256682 None:intergenic 55.0%
CCTAATGACTCTGCTACCGG+TGG - chr8_4:51256660-51256679 Msa1331690:CDS 55.0%
GAACAACGAGCAGCTGGAGT+TGG - chr8_4:51257781-51257800 Msa1331690:CDS 55.0%
CATGCCGAGCTAAGCAGGAA+AGG + chr8_4:51257924-51257943 None:intergenic 55.0%
ACCACCACTGGCCATACTGA+TGG - chr8_4:51258595-51258614 Msa1331690:intron 55.0%
TCCATCAGTATGGCCAGTGG+TGG + chr8_4:51258599-51258618 None:intergenic 55.0%
! CAACTGGAGTGCCTCTGATC+TGG + chr8_4:51258660-51258679 None:intergenic 55.0%
!! ATCAGAGGCACTCCAGTTGC+AGG - chr8_4:51258661-51258680 Msa1331690:intron 55.0%
TTGGGCAATCCCACAGCTCA+GGG + chr8_4:51259165-51259184 None:intergenic 55.0%
ATGTCAAGAGGGCTGAGCTC+TGG - chr8_4:51259667-51259686 Msa1331690:intron 55.0%
ACTCTTGAGGGCTTCTCCCT+TGG - chr8_4:51259950-51259969 Msa1331690:intron 55.0%
TTCAGCCCCAAGCTGCTATG+AGG - chr8_4:51260327-51260346 Msa1331690:CDS 55.0%
TCGTAGGGAACAGTGTGGCA+TGG - chr8_4:51260417-51260436 Msa1331690:CDS 55.0%
CTCCGAGCTGTCTCAGGATG+CGG + chr8_4:51256602-51256621 None:intergenic 60.0%
CACCTTCTCCGAGCTGTCTC+AGG + chr8_4:51256608-51256627 None:intergenic 60.0%
CTGAGACAGCTCGGAGAAGG+TGG - chr8_4:51256606-51256625 Msa1331690:CDS 60.0%
! GCGCGCGCGCTTGATTGTTT+TGG - chr8_4:51257173-51257192 Msa1331690:intron 60.0%
! ACGAGCAGCTGGAGTTGGTC+AGG - chr8_4:51257786-51257805 Msa1331690:CDS 60.0%
! CGAGCAGCTGGAGTTGGTCA+GGG - chr8_4:51257787-51257806 Msa1331690:CDS 60.0%
TTCATCAGGGGAGGGCGACT+AGG - chr8_4:51258183-51258202 Msa1331690:intron 60.0%
TCATCAGGGGAGGGCGACTA+GGG - chr8_4:51258184-51258203 Msa1331690:intron 60.0%
TTTCCGAGCCCCTGAGCTGT+GGG - chr8_4:51259153-51259172 Msa1331690:CDS 60.0%
AATCCCACAGCTCAGGGGCT+CGG + chr8_4:51259159-51259178 None:intergenic 60.0%
TGGGCAATCCCACAGCTCAG+GGG + chr8_4:51259164-51259183 None:intergenic 60.0%
CTTGGGCAATCCCACAGCTC+AGG + chr8_4:51259166-51259185 None:intergenic 60.0%
!! AAGAGGGCTGAGCTCTGGAG+AGG - chr8_4:51259672-51259691 Msa1331690:intron 60.0%
!! AGAGGGCTGAGCTCTGGAGA+GGG - chr8_4:51259673-51259692 Msa1331690:intron 60.0%
GTCTGGTGGAAGCCTGCAAC+TGG - chr8_4:51260220-51260239 Msa1331690:intron 60.0%
GCTCAGGTCAAATGGCCAGC+TGG - chr8_4:51260254-51260273 Msa1331690:intron 60.0%
! GCAGCTGGAGTTGGTCAGGG+AGG - chr8_4:51257790-51257809 Msa1331690:CDS 65.0%
CACAGCTCAGGGGCTCGGAA+AGG + chr8_4:51259154-51259173 None:intergenic 65.0%
CTTTCCGAGCCCCTGAGCTG+TGG - chr8_4:51259152-51259171 Msa1331690:CDS 65.0%
!! GAGGGCTGAGCTCTGGAGAG+GGG - chr8_4:51259674-51259693 Msa1331690:intron 65.0%
CGGGGCCTCATAGCAGCTTG+GGG + chr8_4:51260335-51260354 None:intergenic 65.0%
CCGGGGCCTCATAGCAGCTT+GGG + chr8_4:51260336-51260355 None:intergenic 65.0%
CCCAAGCTGCTATGAGGCCC+CGG - chr8_4:51260333-51260352 Msa1331690:CDS 65.0%
TCCGGGGCCTCATAGCAGCT+TGG + chr8_4:51260337-51260356 None:intergenic 65.0%
TCGGCAGTGCTCGTCCCGCA+AGG - chr8_4:51258621-51258640 Msa1331690:intron 70.0%
Chromosome Type Strat End Strand Name
chr8_4 gene 51256256 51260732 51256256 ID=Msa1331690;Name=Msa1331690
chr8_4 mRNA 51256256 51260732 51256256 ID=Msa1331690-mRNA-1;Parent=Msa1331690;Name=Msa1331690-mRNA-1;_AED=0.04;_eAED=0.04;_QI=260|1|1|1|1|1|6|323|342
chr8_4 exon 51256256 51256804 51256256 ID=Msa1331690-mRNA-1:exon:15111;Parent=Msa1331690-mRNA-1
chr8_4 exon 51257740 51257864 51257740 ID=Msa1331690-mRNA-1:exon:15110;Parent=Msa1331690-mRNA-1
chr8_4 exon 51258306 51258491 51258306 ID=Msa1331690-mRNA-1:exon:15109;Parent=Msa1331690-mRNA-1
chr8_4 exon 51258854 51258997 51258854 ID=Msa1331690-mRNA-1:exon:15108;Parent=Msa1331690-mRNA-1
chr8_4 exon 51259102 51259244 51259102 ID=Msa1331690-mRNA-1:exon:15107;Parent=Msa1331690-mRNA-1
chr8_4 exon 51260268 51260732 51260268 ID=Msa1331690-mRNA-1:exon:15106;Parent=Msa1331690-mRNA-1
chr8_4 five_prime_UTR 51260473 51260732 51260473 ID=Msa1331690-mRNA-1:five_prime_utr;Parent=Msa1331690-mRNA-1
chr8_4 CDS 51260268 51260472 51260268 ID=Msa1331690-mRNA-1:cds;Parent=Msa1331690-mRNA-1
chr8_4 CDS 51259102 51259244 51259102 ID=Msa1331690-mRNA-1:cds;Parent=Msa1331690-mRNA-1
chr8_4 CDS 51258854 51258997 51258854 ID=Msa1331690-mRNA-1:cds;Parent=Msa1331690-mRNA-1
chr8_4 CDS 51258306 51258491 51258306 ID=Msa1331690-mRNA-1:cds;Parent=Msa1331690-mRNA-1
chr8_4 CDS 51257740 51257864 51257740 ID=Msa1331690-mRNA-1:cds;Parent=Msa1331690-mRNA-1
chr8_4 CDS 51256579 51256804 51256579 ID=Msa1331690-mRNA-1:cds;Parent=Msa1331690-mRNA-1
chr8_4 three_prime_UTR 51256256 51256578 51256256 ID=Msa1331690-mRNA-1:three_prime_utr;Parent=Msa1331690-mRNA-1
Gene Sequence

>Msa1331690

ATGGGTTGCTCATTCTCCGGTTTAAATGCATTATATGATTCTGTGAACGGAGGTGGTGATGTTTGGATCAACGAGAATCGATTCCGCATCCTGAGACAGCTCGGAGAAGGTGGCTTCGCTTACGTTTATCTCGTTAAGGAAGCTCCTAATGACTCTGCTACCGGTGGTCTCGCTAATAAGCTCAAAGACTCTTCTCATCTCGCAGATGATGGATCTTATGCTATGAAAAAGGTCCTCATTCAGAACAACGAGCAGCTGGAGTTGGTCAGGGAGGAGATCCGCGTCTCTTCACTGTTTAGTCACCCCAATCTCCTCCCACTTCTTGATCATGCAATCATATCTGTTAAGCCTACTCAAGAAACATCTTGGACCCATGAAGCGTACTTGTTATTTCCAGTTCATTTGGATGGAACATTGCTAGACAATGCCAAAACAATGAAAGCCAAGAAGGAACACTATTCCACCTCAGATGTTCTTCAAATATTTCGGCAGCTTTGTGCAGGACTAAAGCACATGCACAATTTAGATCCTCCTTATGCTCACAATGATGTCAAACCTGGTAATGTTCTCATAACACACAGAAAAGGACAACCACCACTGGCCATACTGATGGATTTCGGCAGTGCTCGTCCCGCAAGGAAGAAGATTAGCTCCAGATCAGAGGCACTCCAGTTGCAGGAATGGGCATCTGAACATGTCTCTGCTCCTTTCCGAGCCCCTGAGCTGTGGGATTGCCCAAGCCATGCTGATATAGACGAGAGGACTGACGTTTGGTCACTAGGATGCACATTATATGCAATAATGTATGGGGTATCTCCGTTTGAATATGCACTTGGAGAGTCTGGTGGAAGCCTGCAACTGGCTATTGTAAATGCTCAGGTCAAATGGCCAGCTGGACTTAAACCTTCATATCCAGAAGCTCTTCATCAGTTCGTGTCATGGATGCTTCAGCCCCAAGCTGCTATGAGGCCCCGGATAGACGATATCATTATCCATGTTGATAAGTTGATTGCAAAGTTCTCTCAATGA
Protein sequence

>Msa1331690

MGCSFSGLNALYDSVNGGGDVWINENRFRILRQLGEGGFAYVYLVKEAPNDSATGGLANKLKDSSHLADDGSYAMKKVLIQNNEQLELVREEIRVSSLFSHPNLLPLLDHAIISVKPTQETSWTHEAYLLFPVHLDGTLLDNAKTMKAKKEHYSTSDVLQIFRQLCAGLKHMHNLDPPYAHNDVKPGNVLITHRKGQPPLAILMDFGSARPARKKISSRSEALQLQEWASEHVSAPFRAPELWDCPSHADIDERTDVWSLGCTLYAIMYGVSPFEYALGESGGSLQLAIVNAQVKWPAGLKPSYPEALHQFVSWMLQPQAAMRPRIDDIIIHVDKLIAKFSQ*