Alfalfa Gene Editing Database
Alfalfa Gene Editing Database
| Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa0071910 | XP_013468001.2 | 89.628 | 376 | 12 | 2 | 1 | 349 | 26 | 401 | 0.0 | 681 |
| Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|
| Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa0071910 | A0A396JQT9 | 89.628 | 376 | 12 | 2 | 1 | 349 | 26 | 401 | 0.0 | 681 |
| Gene ID | Type | Classification |
|---|
| Gene ID | Type | Classification |
|---|
Co-expression Network
| Gene1 | Gene2 | correlation coefficient | p_value | FDR |
|---|---|---|---|---|
| Msa0000550 | Msa0071910 | 0.813224 | 2.852470e-51 | -8.615850e-47 |
| Msa0005350 | Msa0071910 | -0.818718 | 1.693827e-52 | -8.615850e-47 |
| Msa0006700 | Msa0071910 | -0.819338 | 1.224259e-52 | -8.615850e-47 |
| Msa0011720 | Msa0071910 | -0.817674 | 2.916821e-52 | -8.615850e-47 |
| Msa0042980 | Msa0071910 | 0.806279 | 8.885096e-50 | -8.615850e-47 |
| Msa0044710 | Msa0071910 | -0.824326 | 8.576646e-54 | -8.615850e-47 |
| Msa0050730 | Msa0071910 | -0.822240 | 2.633257e-53 | -8.615850e-47 |
| Msa0050760 | Msa0071910 | -0.839469 | 1.555794e-57 | -8.615850e-47 |
| Msa0053900 | Msa0071910 | -0.834138 | 3.564231e-56 | -8.615850e-47 |
| Msa0055280 | Msa0071910 | -0.810662 | 1.031304e-50 | -8.615850e-47 |
| Msa0056140 | Msa0071910 | 0.805929 | 1.052815e-49 | -8.615850e-47 |
| Msa0060600 | Msa0071910 | -0.811708 | 6.114597e-51 | -8.615850e-47 |
| Msa0063350 | Msa0071910 | 0.835102 | 2.040198e-56 | -8.615850e-47 |
| Msa0071550 | Msa0071910 | -0.869170 | 3.783559e-66 | -8.615850e-47 |
| Msa0071910 | Msa0092990 | -0.825346 | 4.928333e-54 | -8.615850e-47 |
| Msa0071910 | Msa0094100 | -0.828558 | 8.411247e-55 | -8.615850e-47 |
| Msa0071910 | Msa0099730 | -0.824484 | 7.873734e-54 | -8.615850e-47 |
| Msa0071910 | Msa0101060 | -0.807775 | 4.286217e-50 | -8.615850e-47 |
| Msa0071910 | Msa0105340 | -0.825381 | 4.835181e-54 | -8.615850e-47 |
| Msa0071910 | Msa0111310 | -0.819823 | 9.486846e-53 | -8.615850e-47 |
| Msa0071910 | Msa0148120 | -0.806570 | 7.713693e-50 | -8.615850e-47 |
| Msa0071910 | Msa0148360 | -0.836055 | 1.170832e-56 | -8.615850e-47 |
| Msa0071910 | Msa0151690 | -0.815336 | 9.739801e-52 | -8.615850e-47 |
| Msa0071910 | Msa0162810 | -0.802328 | 5.909907e-49 | -8.615850e-47 |
| Msa0071910 | Msa0164360 | -0.837520 | 4.952387e-57 | -8.615850e-47 |
| Msa0071910 | Msa0165470 | -0.800317 | 1.525033e-48 | -8.615850e-47 |
| Msa0071910 | Msa0178350 | -0.835044 | 2.110291e-56 | -8.615850e-47 |
| Msa0071910 | Msa0178860 | 0.818352 | 2.049750e-52 | -8.615850e-47 |
| Msa0071910 | Msa0185640 | 0.861053 | 1.344077e-63 | -8.615850e-47 |
| Msa0071910 | Msa0188630 | -0.814224 | 1.718034e-51 | -8.615850e-47 |
| Msa0071910 | Msa0188680 | 0.857549 | 1.513182e-62 | -8.615850e-47 |
| Msa0071910 | Msa0191630 | -0.838890 | 2.197339e-57 | -8.615850e-47 |
| Msa0071910 | Msa0197940 | 0.815681 | 8.163316e-52 | -8.615850e-47 |
| Msa0071910 | Msa0198440 | -0.808811 | 2.578416e-50 | -8.615850e-47 |
| Msa0071910 | Msa0208630 | -0.819016 | 1.448949e-52 | -8.615850e-47 |
| Msa0071910 | Msa0217400 | -0.803182 | 3.937728e-49 | -8.615850e-47 |
| Msa0071910 | Msa0223100 | -0.823251 | 1.532032e-53 | -8.615850e-47 |
| Msa0071910 | Msa0223290 | -0.828718 | 7.694930e-55 | -8.615850e-47 |
| Msa0071910 | Msa0223380 | -0.849050 | 4.145639e-60 | -8.615850e-47 |
| Msa0071910 | Msa0223410 | 0.810744 | 9.898954e-51 | -8.615850e-47 |
| Msa0071910 | Msa0236440 | -0.818801 | 1.621341e-52 | -8.615850e-47 |
| Msa0071910 | Msa0240780 | -0.819049 | 1.423852e-52 | -8.615850e-47 |
| Msa0071910 | Msa0243690 | -0.812480 | 4.150324e-51 | -8.615850e-47 |
| Msa0071910 | Msa0252180 | -0.818140 | 2.289410e-52 | -8.615850e-47 |
| Msa0071910 | Msa0265820 | -0.830984 | 2.158192e-55 | -8.615850e-47 |
| Msa0071910 | Msa0269450 | -0.829533 | 4.882436e-55 | -8.615850e-47 |
| Msa0071910 | Msa0270220 | 0.861691 | 8.584264e-64 | -8.615850e-47 |
| Msa0071910 | Msa0270270 | -0.820278 | 7.463631e-53 | -8.615850e-47 |
| Msa0071910 | Msa0274520 | -0.805807 | 1.116612e-49 | -8.615850e-47 |
| Msa0071910 | Msa0277530 | -0.805716 | 1.167014e-49 | -8.615850e-47 |
| Msa0071910 | Msa0278670 | -0.810335 | 1.213432e-50 | -8.615850e-47 |
| Msa0071910 | Msa0279210 | 0.808910 | 2.455112e-50 | -8.615850e-47 |
| Msa0071910 | Msa0279250 | 0.814320 | 1.636387e-51 | -8.615850e-47 |
| Msa0071910 | Msa0282170 | -0.835541 | 1.580260e-56 | -8.615850e-47 |
| Msa0071910 | Msa0282250 | -0.808319 | 3.282708e-50 | -8.615850e-47 |
| Msa0071910 | Msa0288240 | -0.847908 | 8.585755e-60 | -8.615850e-47 |
| Msa0071910 | Msa0288320 | -0.801259 | 9.797082e-49 | -8.615850e-47 |
| Msa0071910 | Msa0288330 | -0.831820 | 1.344178e-55 | -8.615850e-47 |
| Msa0071910 | Msa0292180 | -0.803236 | 3.838800e-49 | -8.615850e-47 |
| Msa0071910 | Msa0296760 | -0.823999 | 1.023741e-53 | -8.615850e-47 |
| Msa0071910 | Msa0302650 | -0.802974 | 4.348488e-49 | -8.615850e-47 |
| Msa0071910 | Msa0306210 | 0.819886 | 9.175229e-53 | -8.615850e-47 |
| Msa0071910 | Msa0307830 | 0.868858 | 4.777190e-66 | -8.615850e-47 |
| Msa0071910 | Msa0309080 | 0.811899 | 5.558103e-51 | -8.615850e-47 |
| Msa0071910 | Msa0309550 | -0.830467 | 2.889139e-55 | -8.615850e-47 |
| Msa0071910 | Msa0309930 | 0.811433 | 7.018984e-51 | -8.615850e-47 |
| Msa0071910 | Msa0318070 | -0.802177 | 6.348765e-49 | -8.615850e-47 |
| Msa0071910 | Msa0318970 | 0.807935 | 3.963166e-50 | -8.615850e-47 |
| Msa0071910 | Msa0326670 | -0.849816 | 2.536116e-60 | -8.615850e-47 |
| Msa0071910 | Msa0342340 | 0.860776 | 1.631611e-63 | -8.615850e-47 |
| Msa0071910 | Msa0344830 | -0.802942 | 4.416180e-49 | -8.615850e-47 |
| Msa0071910 | Msa0363460 | -0.802082 | 6.639729e-49 | -8.615850e-47 |
| Msa0071910 | Msa0365490 | -0.825997 | 3.454525e-54 | -8.615850e-47 |
| Msa0071910 | Msa0371420 | 0.843347 | 1.481358e-58 | -8.615850e-47 |
| Msa0071910 | Msa0371540 | -0.801294 | 9.637508e-49 | -8.615850e-47 |
| Msa0071910 | Msa0371570 | -0.814272 | 1.676578e-51 | -8.615850e-47 |
| Msa0071910 | Msa0375060 | 0.814461 | 1.523005e-51 | -8.615850e-47 |
| Msa0071910 | Msa0379640 | -0.800390 | 1.474069e-48 | -8.615850e-47 |
| Msa0071910 | Msa0381620 | 0.801258 | 9.802899e-49 | -8.615850e-47 |
| Msa0071910 | Msa0389360 | -0.805654 | 1.202711e-49 | -8.615850e-47 |
| Msa0071910 | Msa0389810 | -0.834748 | 2.505319e-56 | -8.615850e-47 |
| Msa0071910 | Msa0394340 | -0.807759 | 4.320486e-50 | -8.615850e-47 |
| Msa0071910 | Msa0405660 | 0.800418 | 1.455038e-48 | -8.615850e-47 |
| Msa0071910 | Msa0411000 | -0.815825 | 7.581082e-52 | -8.615850e-47 |
| Msa0071910 | Msa0414070 | -0.802313 | 5.951615e-49 | -8.615850e-47 |
| Msa0071910 | Msa0419620 | 0.853592 | 2.158340e-61 | -8.615850e-47 |
| Msa0071910 | Msa0419990 | -0.834017 | 3.821247e-56 | -8.615850e-47 |
| Msa0071910 | Msa0431520 | -0.819880 | 9.205891e-53 | -8.615850e-47 |
| Msa0071910 | Msa0431830 | -0.825017 | 5.894018e-54 | -8.615850e-47 |
| Msa0071910 | Msa0437710 | -0.817498 | 3.195838e-52 | -8.615850e-47 |
| Msa0071910 | Msa0442850 | -0.811339 | 7.356686e-51 | -8.615850e-47 |
| Msa0071910 | Msa0448550 | 0.802464 | 5.540639e-49 | -8.615850e-47 |
| Msa0071910 | Msa0449760 | -0.828890 | 6.989683e-55 | -8.615850e-47 |
| Msa0071910 | Msa0455230 | -0.802041 | 6.770226e-49 | -8.615850e-47 |
| Msa0071910 | Msa0458440 | -0.831012 | 2.123983e-55 | -8.615850e-47 |
| Msa0071910 | Msa0459770 | 0.804787 | 1.826972e-49 | -8.615850e-47 |
| Msa0071910 | Msa0464900 | -0.842842 | 2.019299e-58 | -8.615850e-47 |
| Msa0071910 | Msa0465670 | 0.852264 | 5.172658e-61 | -8.615850e-47 |
| Msa0071910 | Msa0465680 | 0.870549 | 1.341568e-66 | -8.615850e-47 |
| Msa0071910 | Msa0465930 | -0.837270 | 5.738954e-57 | -8.615850e-47 |
| Msa0071910 | Msa0465970 | -0.829521 | 4.914701e-55 | -8.615850e-47 |
| Msa0071910 | Msa0466060 | -0.815057 | 1.123559e-51 | -8.615850e-47 |
| Msa0071910 | Msa0467900 | 0.808424 | 3.118439e-50 | -8.615850e-47 |
| Msa0071910 | Msa0467960 | 0.800916 | 1.151175e-48 | -8.615850e-47 |
| Msa0071910 | Msa0468130 | -0.831901 | 1.283317e-55 | -8.615850e-47 |
| Msa0071910 | Msa0473240 | -0.834740 | 2.516313e-56 | -8.615850e-47 |
| Msa0071910 | Msa0480320 | -0.812257 | 4.644370e-51 | -8.615850e-47 |
| Msa0071910 | Msa0482190 | 0.859501 | 3.958899e-63 | -8.615850e-47 |
| Msa0071910 | Msa0485500 | 0.856656 | 2.775679e-62 | -8.615850e-47 |
| Msa0071910 | Msa0489610 | -0.816616 | 5.046241e-52 | -8.615850e-47 |
| Msa0071910 | Msa0491500 | -0.821028 | 5.019297e-53 | -8.615850e-47 |
| Msa0071910 | Msa0491520 | -0.822986 | 1.766199e-53 | -8.615850e-47 |
| Msa0071910 | Msa0509970 | -0.812707 | 3.702923e-51 | -8.615850e-47 |
| Msa0071910 | Msa0511720 | 0.857399 | 1.675866e-62 | -8.615850e-47 |
| Msa0071910 | Msa0517330 | -0.813294 | 2.753233e-51 | -8.615850e-47 |
| Msa0071910 | Msa0517340 | -0.809055 | 2.285640e-50 | -8.615850e-47 |
| Msa0071910 | Msa0520220 | -0.813956 | 1.968388e-51 | -8.615850e-47 |
| Msa0071910 | Msa0524890 | 0.842709 | 2.191218e-58 | -8.615850e-47 |
| Msa0071910 | Msa0527250 | -0.827196 | 1.787638e-54 | -8.615850e-47 |
| Msa0071910 | Msa0536220 | -0.802874 | 4.560085e-49 | -8.615850e-47 |
| Msa0071910 | Msa0540070 | -0.847578 | 1.058352e-59 | -8.615850e-47 |
| Msa0071910 | Msa0543900 | -0.823614 | 1.259500e-53 | -8.615850e-47 |
| Msa0071910 | Msa0550430 | -0.805900 | 1.067674e-49 | -8.615850e-47 |
| Msa0071910 | Msa0553220 | 0.834788 | 2.447268e-56 | -8.615850e-47 |
| Msa0071910 | Msa0553460 | -0.816234 | 6.143616e-52 | -8.615850e-47 |
| Msa0071910 | Msa0558690 | -0.803477 | 3.421589e-49 | -8.615850e-47 |
| Msa0071910 | Msa0561130 | 0.829686 | 4.479867e-55 | -8.615850e-47 |
| Msa0071910 | Msa0564510 | -0.811379 | 7.210351e-51 | -8.615850e-47 |
| Msa0071910 | Msa0576990 | 0.822111 | 2.821816e-53 | -8.615850e-47 |
| Msa0071910 | Msa0578970 | -0.831899 | 1.284908e-55 | -8.615850e-47 |
| Msa0071910 | Msa0581920 | -0.804445 | 2.153149e-49 | -8.615850e-47 |
| Msa0071910 | Msa0587690 | -0.819031 | 1.437571e-52 | -8.615850e-47 |
| Msa0071910 | Msa0599580 | -0.816293 | 5.958633e-52 | -8.615850e-47 |
| Msa0071910 | Msa0599770 | -0.820590 | 6.331036e-53 | -8.615850e-47 |
| Msa0071910 | Msa0607540 | -0.803370 | 3.601264e-49 | -8.615850e-47 |
| Msa0071910 | Msa0610590 | -0.827862 | 1.237158e-54 | -8.615850e-47 |
| Msa0071910 | Msa0611550 | -0.821949 | 3.075689e-53 | -8.615850e-47 |
| Msa0071910 | Msa0617370 | -0.815955 | 7.088827e-52 | -8.615850e-47 |
| Msa0071910 | Msa0617830 | -0.808022 | 3.799269e-50 | -8.615850e-47 |
| Msa0071910 | Msa0620640 | -0.813565 | 2.399777e-51 | -8.615850e-47 |
| Msa0071910 | Msa0621750 | 0.802675 | 5.014047e-49 | -8.615850e-47 |
| Msa0071910 | Msa0621890 | -0.806872 | 6.661894e-50 | -8.615850e-47 |
| Msa0071910 | Msa0622340 | -0.832019 | 1.200383e-55 | -8.615850e-47 |
| Msa0071910 | Msa0638280 | -0.812583 | 3.941508e-51 | -8.615850e-47 |
| Msa0071910 | Msa0638320 | -0.813212 | 2.869562e-51 | -8.615850e-47 |
| Msa0071910 | Msa0640380 | -0.816333 | 5.838550e-52 | -8.615850e-47 |
| Msa0071910 | Msa0647450 | 0.854064 | 1.578189e-61 | -8.615850e-47 |
| Msa0071910 | Msa0647830 | -0.800674 | 1.290024e-48 | -8.615850e-47 |
| Msa0071910 | Msa0651190 | -0.832783 | 7.761505e-56 | -8.615850e-47 |
| Msa0071910 | Msa0651790 | -0.827210 | 1.774376e-54 | -8.615850e-47 |
| Msa0071910 | Msa0655660 | 0.831711 | 1.429470e-55 | -8.615850e-47 |
| Msa0071910 | Msa0656270 | -0.829231 | 5.780627e-55 | -8.615850e-47 |
| Msa0071910 | Msa0662650 | -0.835705 | 1.436199e-56 | -8.615850e-47 |
| Msa0071910 | Msa0672120 | -0.811285 | 7.555503e-51 | -8.615850e-47 |
| Msa0071910 | Msa0677270 | -0.808309 | 3.298901e-50 | -8.615850e-47 |
| Msa0071910 | Msa0678820 | -0.822046 | 2.920387e-53 | -8.615850e-47 |
| Msa0071910 | Msa0690440 | -0.809041 | 2.301541e-50 | -8.615850e-47 |
| Msa0071910 | Msa0694250 | -0.849653 | 2.816030e-60 | -8.615850e-47 |
| Msa0071910 | Msa0697140 | -0.818394 | 2.005496e-52 | -8.615850e-47 |
| Msa0071910 | Msa0699920 | 0.814537 | 1.464555e-51 | -8.615850e-47 |
| Msa0071910 | Msa0700070 | -0.835287 | 1.832416e-56 | -8.615850e-47 |
| Msa0071910 | Msa0704470 | 0.800986 | 1.114267e-48 | -8.615850e-47 |
| Msa0071910 | Msa0708860 | -0.837792 | 4.217080e-57 | -8.615850e-47 |
| Msa0071910 | Msa0714340 | -0.806644 | 7.440990e-50 | -8.615850e-47 |
| Msa0071910 | Msa0714380 | -0.801309 | 9.567192e-49 | -8.615850e-47 |
| Msa0071910 | Msa0714600 | -0.831970 | 1.233884e-55 | -8.615850e-47 |
| Msa0071910 | Msa0715720 | -0.818391 | 2.008374e-52 | -8.615850e-47 |
| Msa0071910 | Msa0722930 | -0.845164 | 4.818203e-59 | -8.615850e-47 |
| Msa0071910 | Msa0723140 | -0.835423 | 1.692727e-56 | -8.615850e-47 |
| Msa0071910 | Msa0724050 | -0.812832 | 3.476209e-51 | -8.615850e-47 |
| Msa0071910 | Msa0731710 | -0.834889 | 2.308128e-56 | -8.615850e-47 |
| Msa0071910 | Msa0744170 | 0.818014 | 2.445416e-52 | -8.615850e-47 |
| Msa0071910 | Msa0756310 | -0.818044 | 2.407246e-52 | -8.615850e-47 |
| Msa0071910 | Msa0763880 | -0.808265 | 3.371144e-50 | -8.615850e-47 |
| Msa0071910 | Msa0767080 | -0.815590 | 8.553267e-52 | -8.615850e-47 |
| Msa0071910 | Msa0771720 | -0.804532 | 2.064548e-49 | -8.615850e-47 |
| Msa0071910 | Msa0773610 | -0.814453 | 1.528790e-51 | -8.615850e-47 |
| Msa0071910 | Msa0775260 | -0.820234 | 7.639276e-53 | -8.615850e-47 |
| Msa0071910 | Msa0788070 | 0.815132 | 1.081262e-51 | -8.615850e-47 |
| Msa0071910 | Msa0789270 | -0.813019 | 3.163401e-51 | -8.615850e-47 |
| Msa0071910 | Msa0789280 | -0.811416 | 7.079540e-51 | -8.615850e-47 |
| Msa0071910 | Msa0789290 | -0.808620 | 2.832558e-50 | -8.615850e-47 |
| Msa0071910 | Msa0789300 | -0.810098 | 1.364507e-50 | -8.615850e-47 |
| Msa0071910 | Msa0790390 | 0.856217 | 3.736022e-62 | -8.615850e-47 |
| Msa0071910 | Msa0801100 | -0.802181 | 6.336448e-49 | -8.615850e-47 |
| Msa0071910 | Msa0806210 | -0.806740 | 7.103419e-50 | -8.615850e-47 |
| Msa0071910 | Msa0812760 | -0.804083 | 2.561373e-49 | -8.615850e-47 |
| Msa0071910 | Msa0835730 | -0.817493 | 3.204258e-52 | -8.615850e-47 |
| Msa0071910 | Msa0835920 | -0.822761 | 1.992082e-53 | -8.615850e-47 |
| Msa0071910 | Msa0839330 | -0.812669 | 3.774269e-51 | -8.615850e-47 |
| Msa0071910 | Msa0843280 | -0.816531 | 5.271376e-52 | -8.615850e-47 |
| Msa0071910 | Msa0844900 | -0.842070 | 3.236314e-58 | -8.615850e-47 |
| Msa0071910 | Msa0845000 | -0.830705 | 2.526636e-55 | -8.615850e-47 |
| Msa0071910 | Msa0847200 | -0.819324 | 1.232761e-52 | -8.615850e-47 |
| Msa0071910 | Msa0853170 | -0.829530 | 4.889325e-55 | -8.615850e-47 |
| Msa0071910 | Msa0876850 | 0.820978 | 5.153475e-53 | -8.615850e-47 |
| Msa0071910 | Msa0882510 | -0.819267 | 1.270175e-52 | -8.615850e-47 |
| Msa0071910 | Msa0887070 | -0.802505 | 5.434479e-49 | -8.615850e-47 |
| Msa0071910 | Msa0896210 | -0.800549 | 1.368310e-48 | -8.615850e-47 |
| Msa0071910 | Msa0900200 | -0.832366 | 9.847042e-56 | -8.615850e-47 |
| Msa0071910 | Msa0903730 | -0.801432 | 9.028520e-49 | -8.615850e-47 |
| Msa0071910 | Msa0908170 | -0.857557 | 1.505402e-62 | -8.615850e-47 |
| Msa0071910 | Msa0910980 | 0.841414 | 4.820755e-58 | -8.615850e-47 |
| Msa0071910 | Msa0926800 | -0.836004 | 1.205941e-56 | -8.615850e-47 |
| Msa0071910 | Msa0927670 | -0.826305 | 2.917977e-54 | -8.615850e-47 |
| Msa0071910 | Msa0946080 | -0.802199 | 6.284572e-49 | -8.615850e-47 |
| Msa0071910 | Msa0946690 | 0.834158 | 3.523119e-56 | -8.615850e-47 |
| Msa0071910 | Msa0950620 | -0.806650 | 7.419819e-50 | -8.615850e-47 |
| Msa0071910 | Msa0951720 | -0.817303 | 3.536947e-52 | -8.615850e-47 |
| Msa0071910 | Msa0961420 | 0.861853 | 7.662820e-64 | -8.615850e-47 |
| Msa0071910 | Msa0965520 | -0.856508 | 3.069354e-62 | -8.615850e-47 |
| Msa0071910 | Msa0982270 | -0.840036 | 1.107621e-57 | -8.615850e-47 |
| Msa0071910 | Msa0988500 | -0.808725 | 2.689647e-50 | -8.615850e-47 |
| Msa0071910 | Msa0992490 | 0.836388 | 9.637351e-57 | -8.615850e-47 |
| Msa0071910 | Msa0999040 | -0.837301 | 5.635390e-57 | -8.615850e-47 |
| Msa0071910 | Msa0999960 | 0.811201 | 7.880782e-51 | -8.615850e-47 |
| Msa0071910 | Msa1000020 | -0.829603 | 4.693395e-55 | -8.615850e-47 |
| Msa0071910 | Msa1019840 | 0.837656 | 4.570138e-57 | -8.615850e-47 |
| Msa0071910 | Msa1021340 | -0.811450 | 6.957932e-51 | -8.615850e-47 |
| Msa0071910 | Msa1026760 | -0.806830 | 6.800189e-50 | -8.615850e-47 |
| Msa0071910 | Msa1026790 | -0.804685 | 1.918813e-49 | -8.615850e-47 |
| Msa0071910 | Msa1034360 | -0.807814 | 4.205790e-50 | -8.615850e-47 |
| Msa0071910 | Msa1037700 | 0.851570 | 8.140960e-61 | -8.615850e-47 |
| Msa0071910 | Msa1039880 | -0.823631 | 1.248550e-53 | -8.615850e-47 |
| Msa0071910 | Msa1054410 | -0.820920 | 5.314159e-53 | -8.615850e-47 |
| Msa0071910 | Msa1068200 | 0.800342 | 1.507521e-48 | -8.615850e-47 |
| Msa0071910 | Msa1072460 | 0.838009 | 3.709674e-57 | -8.615850e-47 |
| Msa0071910 | Msa1073070 | 0.817592 | 3.045009e-52 | -8.615850e-47 |
| Msa0071910 | Msa1075080 | 0.831143 | 1.972331e-55 | -8.615850e-47 |
| Msa0071910 | Msa1075220 | 0.810520 | 1.106742e-50 | -8.615850e-47 |
| Msa0071910 | Msa1079730 | 0.823368 | 1.438004e-53 | -8.615850e-47 |
| Msa0071910 | Msa1080790 | -0.837395 | 5.330457e-57 | -8.615850e-47 |
| Msa0071910 | Msa1082820 | 0.821725 | 3.465533e-53 | -8.615850e-47 |
| Msa0071910 | Msa1091670 | -0.819103 | 1.384683e-52 | -8.615850e-47 |
| Msa0071910 | Msa1092090 | -0.855062 | 8.116437e-62 | -8.615850e-47 |
| Msa0071910 | Msa1095480 | -0.816793 | 4.605475e-52 | -8.615850e-47 |
| Msa0071910 | Msa1116130 | 0.802590 | 5.219095e-49 | -8.615850e-47 |
| Msa0071910 | Msa1118930 | -0.838284 | 3.150118e-57 | -8.615850e-47 |
| Msa0071910 | Msa1124540 | 0.826658 | 2.403547e-54 | -8.615850e-47 |
| Msa0071910 | Msa1125080 | -0.801492 | 8.777639e-49 | -8.615850e-47 |
| Msa0071910 | Msa1130210 | 0.835352 | 1.763636e-56 | -8.615850e-47 |
| Msa0071910 | Msa1130270 | 0.813613 | 2.342545e-51 | -8.615850e-47 |
| Msa0071910 | Msa1131940 | 0.858496 | 7.915238e-63 | -8.615850e-47 |
| Msa0071910 | Msa1132560 | 0.805403 | 1.357394e-49 | -8.615850e-47 |
| Msa0071910 | Msa1141250 | 0.839771 | 1.298407e-57 | -8.615850e-47 |
| Msa0071910 | Msa1142500 | -0.832160 | 1.107682e-55 | -8.615850e-47 |
| Msa0071910 | Msa1148720 | -0.819048 | 1.425182e-52 | -8.615850e-47 |
| Msa0071910 | Msa1148750 | -0.813434 | 2.564772e-51 | -8.615850e-47 |
| Msa0071910 | Msa1157020 | -0.811995 | 5.295304e-51 | -8.615850e-47 |
| Msa0071910 | Msa1168040 | 0.819573 | 1.082059e-52 | -8.615850e-47 |
| Msa0071910 | Msa1171870 | -0.802336 | 5.888157e-49 | -8.615850e-47 |
| Msa0071910 | Msa1183100 | 0.801379 | 9.259773e-49 | -8.615850e-47 |
| Msa0071910 | Msa1184050 | -0.800809 | 1.210620e-48 | -8.615850e-47 |
| Msa0071910 | Msa1204980 | 0.855766 | 5.062113e-62 | -8.615850e-47 |
| Msa0071910 | Msa1205010 | 0.860032 | 2.740887e-63 | -8.615850e-47 |
| Msa0071910 | Msa1205130 | -0.811544 | 6.638766e-51 | -8.615850e-47 |
| Msa0071910 | Msa1206020 | -0.817425 | 3.319388e-52 | -8.615850e-47 |
| Msa0071910 | Msa1207480 | 0.804057 | 2.593059e-49 | -8.615850e-47 |
| Msa0071910 | Msa1211390 | -0.812500 | 4.109341e-51 | -8.615850e-47 |
| Msa0071910 | Msa1213440 | 0.860103 | 2.607480e-63 | -8.615850e-47 |
| Msa0071910 | Msa1214880 | -0.827697 | 1.355441e-54 | -8.615850e-47 |
| Msa0071910 | Msa1217430 | 0.801783 | 7.650753e-49 | -8.615850e-47 |
| Msa0071910 | Msa1217810 | -0.867743 | 1.092723e-65 | -8.615850e-47 |
| Msa0071910 | Msa1218650 | -0.833708 | 4.567368e-56 | -8.615850e-47 |
| Msa0071910 | Msa1221200 | 0.814736 | 1.323267e-51 | -8.615850e-47 |
| Msa0071910 | Msa1222030 | 0.805762 | 1.141704e-49 | -8.615850e-47 |
| Msa0071910 | Msa1223160 | 0.816521 | 5.298205e-52 | -8.615850e-47 |
| Msa0071910 | Msa1228160 | 0.829109 | 6.185405e-55 | -8.615850e-47 |
| Msa0071910 | Msa1233500 | -0.821334 | 4.265899e-53 | -8.615850e-47 |
| Msa0071910 | Msa1236640 | 0.817827 | 2.694372e-52 | -8.615850e-47 |
| Msa0071910 | Msa1244830 | -0.804933 | 1.702962e-49 | -8.615850e-47 |
| Msa0071910 | Msa1252070 | -0.837201 | 5.975588e-57 | -8.615850e-47 |
| Msa0071910 | Msa1256540 | 0.857646 | 1.416343e-62 | -8.615850e-47 |
| Msa0071910 | Msa1258380 | 0.857752 | 1.317681e-62 | -8.615850e-47 |
| Msa0071910 | Msa1260490 | 0.821733 | 3.451614e-53 | -8.615850e-47 |
| Msa0071910 | Msa1279650 | -0.802510 | 5.420419e-49 | -8.615850e-47 |
| Msa0071910 | Msa1280130 | -0.806610 | 7.565108e-50 | -8.615850e-47 |
| Msa0071910 | Msa1282920 | -0.822371 | 2.455246e-53 | -8.615850e-47 |
| Msa0071910 | Msa1292730 | -0.827434 | 1.567690e-54 | -8.615850e-47 |
| Msa0071910 | Msa1296960 | 0.857484 | 1.582255e-62 | -8.615850e-47 |
| Msa0071910 | Msa1297090 | -0.818739 | 1.675289e-52 | -8.615850e-47 |
| Msa0071910 | Msa1300350 | 0.842748 | 2.139495e-58 | -8.615850e-47 |
| Msa0071910 | Msa1300860 | -0.818798 | 1.623992e-52 | -8.615850e-47 |
| Msa0071910 | Msa1302190 | 0.821713 | 3.488854e-53 | -8.615850e-47 |
| Msa0071910 | Msa1304840 | -0.801689 | 7.997277e-49 | -8.615850e-47 |
| Msa0071910 | Msa1306430 | -0.807438 | 5.054266e-50 | -8.615850e-47 |
| Msa0071910 | Msa1307740 | -0.827576 | 1.449307e-54 | -8.615850e-47 |
| Msa0071910 | Msa1308330 | 0.801377 | 9.265274e-49 | -8.615850e-47 |
| Msa0071910 | Msa1308480 | -0.800319 | 1.523618e-48 | -8.615850e-47 |
| Msa0071910 | Msa1316560 | 0.826345 | 2.855033e-54 | -8.615850e-47 |
| Msa0071910 | Msa1322190 | -0.862569 | 4.619861e-64 | -8.615850e-47 |
| Msa0071910 | Msa1328850 | -0.807778 | 4.279596e-50 | -8.615850e-47 |
| Msa0071910 | Msa1331690 | 0.814244 | 1.700517e-51 | -8.615850e-47 |
| Msa0071910 | Msa1331920 | -0.825948 | 3.547890e-54 | -8.615850e-47 |
| Msa0071910 | Msa1335970 | 0.834296 | 3.253977e-56 | -8.615850e-47 |
| Msa0071910 | Msa1340650 | -0.807738 | 4.365986e-50 | -8.615850e-47 |
| Msa0071910 | Msa1358610 | 0.823026 | 1.728382e-53 | -8.615850e-47 |
| Msa0071910 | Msa1358870 | 0.823417 | 1.401161e-53 | -8.615850e-47 |
| Msa0071910 | Msa1363890 | -0.803810 | 2.917853e-49 | -8.615850e-47 |
| Msa0071910 | Msa1364330 | 0.800423 | 1.451604e-48 | -8.615850e-47 |
| Msa0071910 | Msa1365040 | 0.803712 | 3.057866e-49 | -8.615850e-47 |
| Msa0071910 | Msa1369530 | -0.819530 | 1.106424e-52 | -8.615850e-47 |
| Msa0071910 | Msa1371580 | -0.827342 | 1.649141e-54 | -8.615850e-47 |
| Msa0071910 | Msa1379710 | -0.827588 | 1.439664e-54 | -8.615850e-47 |
| Msa0071910 | Msa1388790 | 0.820925 | 5.299992e-53 | -8.615850e-47 |
| Msa0071910 | Msa1393040 | -0.830006 | 3.744027e-55 | -8.615850e-47 |
| Msa0071910 | Msa1397970 | -0.827519 | 1.496079e-54 | -8.615850e-47 |
| Msa0071910 | Msa1403580 | 0.852947 | 3.303555e-61 | -8.615850e-47 |
| Msa0071910 | Msa1403930 | 0.819180 | 1.329882e-52 | -8.615850e-47 |
| Msa0071910 | Msa1417830 | 0.802341 | 5.874718e-49 | -8.615850e-47 |
| Msa0071910 | Msa1419110 | -0.844273 | 8.371766e-59 | -8.615850e-47 |
| Msa0071910 | Msa1425010 | -0.830743 | 2.472241e-55 | -8.615850e-47 |
| Msa0071910 | Msa1427830 | -0.834197 | 3.444318e-56 | -8.615850e-47 |
| Msa0071910 | Msa1431000 | -0.802545 | 5.331055e-49 | -8.615850e-47 |
| Msa0071910 | Msa1439230 | -0.835011 | 2.150480e-56 | -8.615850e-47 |
| Msa0071910 | Msa1440600 | -0.839509 | 1.518271e-57 | -8.615850e-47 |
| Msa0071910 | Msa1443290 | 0.864028 | 1.632549e-64 | -8.615850e-47 |
| Msa0071910 | Msa1444250 | 0.855966 | 4.423806e-62 | -8.615850e-47 |
| Msa0071910 | Msa1445030 | -0.825978 | 3.489709e-54 | -8.615850e-47 |
| Msa0071910 | Msa1445420 | 0.808626 | 2.824360e-50 | -8.615850e-47 |
| Msa0071910 | Msa1447560 | -0.823514 | 1.329879e-53 | -8.615850e-47 |
| Msa0071910 | Msa1450020 | -0.836223 | 1.061180e-56 | -8.615850e-47 |
| Msa0071910 | Msa1451620 | 0.837909 | 3.934758e-57 | -8.615850e-47 |
| Msa0071910 | Msa1454110 | -0.825721 | 4.017105e-54 | -8.615850e-47 |
| Msa0071910 | Msa1457670 | 0.808657 | 2.780955e-50 | -8.615850e-47 |
| Msa0071910 | Msa1458550 | -0.800913 | 1.153221e-48 | -8.615850e-47 |
PPI
| Gene1 | Gene2 | Type |
|---|
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa0071910 | MtrunA17_Chr1g0178741 | 89.628 | 376 | 12 | 2 | 1 | 349 | 26 | 401 | 0.0 | 681 |
| Msa0071910 | MtrunA17_Chr1g0178721 | 86.968 | 376 | 22 | 2 | 1 | 349 | 1 | 376 | 0.0 | 663 |
| Msa0071910 | MtrunA17_Chr1g0171181 | 51.176 | 340 | 111 | 3 | 33 | 346 | 1 | 311 | 2.73e-119 | 347 |
| Msa0071910 | MtrunA17_Chr2g0321341 | 46.921 | 341 | 148 | 5 | 33 | 346 | 2 | 336 | 1.33e-112 | 331 |
| Msa0071910 | MtrunA17_Chr2g0321351 | 44.479 | 326 | 142 | 7 | 51 | 346 | 28 | 344 | 3.13e-90 | 275 |
| Msa0071910 | MtrunA17_Chr4g0026421 | 41.595 | 351 | 160 | 8 | 33 | 346 | 1 | 343 | 1.35e-86 | 265 |
| Msa0071910 | MtrunA17_Chr3g0136021 | 41.447 | 304 | 141 | 6 | 73 | 346 | 130 | 426 | 7.54e-75 | 237 |
| Msa0071910 | MtrunA17_Chr4g0029971 | 26.273 | 373 | 203 | 10 | 38 | 347 | 86 | 449 | 2.69e-29 | 117 |
| Msa0071910 | MtrunA17_Chr7g0263721 | 25.731 | 342 | 186 | 9 | 67 | 348 | 151 | 484 | 8.53e-26 | 107 |
| Msa0071910 | MtrunA17_Chr2g0321371 | 50.980 | 51 | 25 | 0 | 280 | 330 | 1 | 51 | 7.24e-15 | 68.9 |
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa0071910 | AT3G48410.1 | 59.452 | 365 | 119 | 3 | 8 | 346 | 10 | 371 | 4.72e-155 | 441 |
| Msa0071910 | AT3G48410.2 | 59.452 | 365 | 119 | 3 | 8 | 346 | 52 | 413 | 1.02e-154 | 441 |
| Msa0071910 | AT2G36290.1 | 57.307 | 349 | 119 | 3 | 31 | 349 | 15 | 363 | 5.59e-147 | 419 |
| Msa0071910 | AT2G36290.2 | 57.061 | 347 | 119 | 3 | 33 | 349 | 3 | 349 | 2.72e-145 | 414 |
| Msa0071910 | AT1G74300.1 | 58.359 | 329 | 109 | 3 | 46 | 346 | 16 | 344 | 9.71e-140 | 400 |
| Msa0071910 | AT1G74280.1 | 55.793 | 328 | 117 | 3 | 47 | 346 | 34 | 361 | 1.16e-131 | 381 |
| Msa0071910 | AT1G74290.1 | 50.824 | 364 | 143 | 5 | 9 | 342 | 1 | 358 | 2.31e-127 | 370 |
| Msa0071910 | AT3G54240.1 | 47.953 | 342 | 152 | 2 | 33 | 348 | 5 | 346 | 1.18e-120 | 352 |
| Msa0071910 | AT5G22460.2 | 45.455 | 341 | 155 | 4 | 33 | 346 | 2 | 338 | 7.15e-107 | 317 |
| Msa0071910 | AT5G22460.3 | 45.455 | 341 | 155 | 4 | 33 | 346 | 2 | 338 | 7.15e-107 | 317 |
| Msa0071910 | AT5G22460.1 | 45.455 | 341 | 155 | 4 | 33 | 346 | 2 | 338 | 7.15e-107 | 317 |
| Msa0071910 | AT1G74300.2 | 55.102 | 245 | 83 | 2 | 129 | 346 | 1 | 245 | 7.41e-93 | 277 |
| Msa0071910 | AT3G03240.1 | 42.763 | 304 | 136 | 7 | 71 | 344 | 35 | 330 | 2.04e-78 | 244 |
| Msa0071910 | AT3G03230.1 | 42.244 | 303 | 138 | 6 | 71 | 344 | 35 | 329 | 5.55e-75 | 235 |
| Msa0071910 | AT3G44510.2 | 41.368 | 307 | 140 | 6 | 73 | 346 | 8 | 307 | 1.92e-74 | 233 |
| Msa0071910 | AT1G08310.2 | 39.482 | 309 | 150 | 6 | 68 | 346 | 5 | 306 | 2.04e-71 | 225 |
| Msa0071910 | AT1G08310.1 | 39.806 | 309 | 146 | 7 | 68 | 346 | 5 | 303 | 5.52e-70 | 221 |
| Msa0071910 | AT3G44510.3 | 40.465 | 215 | 94 | 4 | 73 | 258 | 8 | 217 | 6.03e-44 | 151 |
| Msa0071910 | AT1G08310.3 | 41.176 | 204 | 89 | 4 | 68 | 245 | 5 | 203 | 1.59e-42 | 148 |
| Msa0071910 | AT3G44510.1 | 38.624 | 189 | 104 | 4 | 166 | 346 | 17 | 201 | 5.36e-39 | 138 |
| Msa0071910 | AT3G44510.5 | 38.624 | 189 | 104 | 4 | 166 | 346 | 17 | 201 | 5.36e-39 | 138 |
| Msa0071910 | AT3G44510.4 | 38.624 | 189 | 104 | 4 | 166 | 346 | 17 | 201 | 5.36e-39 | 138 |
| Msa0071910 | AT3G09690.1 | 26.331 | 338 | 186 | 9 | 68 | 347 | 160 | 492 | 1.48e-24 | 104 |
| Msa0071910 | AT3G09690.2 | 26.331 | 338 | 186 | 9 | 68 | 347 | 160 | 492 | 1.48e-24 | 104 |
| Msa0071910 | AT5G02970.1 | 23.836 | 365 | 217 | 7 | 40 | 347 | 129 | 489 | 7.49e-23 | 99.8 |
Find 125 sgRNAs with CRISPR-Local
Find 434 sgRNAs with CRISPR-GE
CRISPR-Local
| sgRNA_sequence | on_target_score | Position | Region |
|---|---|---|---|
| TGAATATTGGATTTGGAAAA+TGG | 0.113721 | 1_2:+44309130 | Msa0071910:CDS |
| CCATCTCTTAGTTTGATTCT+TGG | 0.143000 | 1_2:-44306698 | None:intergenic |
| ATCAGGAGAGCCACATATTT+TGG | 0.144502 | 1_2:-44306657 | None:intergenic |
| CAGGATGTTGTCAAGGAATT+AGG | 0.172204 | 1_2:+44306934 | Msa0071910:intron |
| CCAGTAATCACACTAATAAT+TGG | 0.177238 | 1_2:-44307600 | None:intergenic |
| CACTAGCAGTGTTGTTTATT+GGG | 0.228617 | 1_2:+44306594 | Msa0071910:CDS |
| AGAGGATTTGTTGGCCCTTC+TGG | 0.231299 | 1_2:-44304163 | None:intergenic |
| TTATACTTTGCTGTGTCTTT+AGG | 0.233495 | 1_2:-44306752 | None:intergenic |
| TTGATTCTTGGTGCTGTTAT+AGG | 0.241502 | 1_2:-44306686 | None:intergenic |
| ACACTAGCAGTGTTGTTTAT+TGG | 0.245373 | 1_2:+44306593 | Msa0071910:CDS |
| CGTGACTTGAATATTGGATT+TGG | 0.273224 | 1_2:+44309123 | Msa0071910:CDS |
| TCTTGTTTCGAAAGGATATC+TGG | 0.273570 | 1_2:-44307627 | None:intergenic |
| GCAAGGAGATGAAGATATTA+TGG | 0.279264 | 1_2:+44309215 | Msa0071910:CDS |
| ATGAAGGTTCTGTTCATCTT+TGG | 0.280021 | 1_2:+44309193 | Msa0071910:CDS |
| ATGCTCTTTAATGTACGATT+TGG | 0.280505 | 1_2:-44307009 | None:intergenic |
| CCAATTATTAGTGTGATTAC+TGG | 0.288987 | 1_2:+44307600 | Msa0071910:CDS |
| GCTGGCAGGTGCAGCGCTCT+TGG | 0.294662 | 1_2:+44307428 | Msa0071910:CDS |
| CTCCACCGTGACTTGAATAT+TGG | 0.300790 | 1_2:+44309117 | Msa0071910:CDS |
| GAACCTTCATTGTTTGGAAA+TGG | 0.313934 | 1_2:-44309180 | None:intergenic |
| GGCATTTATTATCTCCGTTT+CGG | 0.317984 | 1_2:+44309415 | Msa0071910:three_prime_UTR |
| TGAACAGAACCTTCATTGTT+TGG | 0.321816 | 1_2:-44309186 | None:intergenic |
| GCTTGCTGATCAATTGGAAT+TGG | 0.321990 | 1_2:+44307050 | Msa0071910:CDS |
| TGGCCCCAGTCGTCAACTTC+TGG | 0.327316 | 1_2:+44307448 | Msa0071910:CDS |
| AGCAAGCTCTTCTATATCTA+AGG | 0.347016 | 1_2:-44307034 | None:intergenic |
| ATGTAATTTCCATTGGGAAT+AGG | 0.350187 | 1_2:-44307505 | None:intergenic |
| AGGATGTTGTCAAGGAATTA+GGG | 0.352902 | 1_2:+44306935 | Msa0071910:intron |
| TATAGAAAATTACGGGTGAT+AGG | 0.365312 | 1_2:-44306832 | None:intergenic |
| CTTGCTGATCAATTGGAATT+GGG | 0.366848 | 1_2:+44307051 | Msa0071910:CDS |
| TACCATGAACTTCCAGGTTC+TGG | 0.368062 | 1_2:+44309288 | Msa0071910:CDS |
| GCTTCGGCCGTTAAGTTTGC+AGG | 0.370202 | 1_2:-44307483 | None:intergenic |
| TCCTTTGATAGACCTGGTTA+TGG | 0.390537 | 1_2:+44306970 | Msa0071910:CDS |
| TGTTTATTGGGGTTCTAGCA+TGG | 0.403951 | 1_2:+44306606 | Msa0071910:CDS |
| ACACGCCATGGCTAACATAC+TGG | 0.404122 | 1_2:+44307556 | Msa0071910:CDS |
| GAATATTGGATTTGGAAAAT+GGG | 0.404775 | 1_2:+44309131 | Msa0071910:CDS |
| TTTGAGATGTATTTGGTGAT+AGG | 0.406630 | 1_2:+44309579 | Msa0071910:three_prime_UTR |
| AGAAGAGCTTGCTGATCAAT+TGG | 0.413236 | 1_2:+44307044 | Msa0071910:CDS |
| GTTCACTACCATGAACTTCC+AGG | 0.414844 | 1_2:+44309282 | Msa0071910:CDS |
| AGAGCTTGTAACTAAGTTGA+TGG | 0.419219 | 1_2:+44307653 | Msa0071910:CDS |
| GTTAAGTTTGCAGGAAGATC+AGG | 0.425710 | 1_2:-44307474 | None:intergenic |
| GGAAGCATCCTCACGGGAAA+AGG | 0.429795 | 1_2:-44309635 | None:intergenic |
| AATAAATGCCAAAGCTAGCC+TGG | 0.429857 | 1_2:-44309402 | None:intergenic |
| AAAATGGGAATATACTCCTT+TGG | 0.430264 | 1_2:+44309146 | Msa0071910:CDS |
| TCCATGGTTTCAGCAGTTGC+AGG | 0.431477 | 1_2:+44306786 | Msa0071910:CDS |
| GTTTATTGGGGTTCTAGCAT+GGG | 0.432543 | 1_2:+44306607 | Msa0071910:CDS |
| TTTCCATTGGGAATAGGCTT+CGG | 0.432983 | 1_2:-44307499 | None:intergenic |
| AAAGACAGATCGGGGTGATC+TGG | 0.433307 | 1_2:+44303958 | Msa0071910:five_prime_UTR |
| CAGTAATCACACTAATAATT+GGG | 0.436521 | 1_2:-44307599 | None:intergenic |
| CAGAGACAGATCGACAAGTA+AGG | 0.438470 | 1_2:-44304018 | None:intergenic |
| CTGAAAAGAAGAGGATTTGT+TGG | 0.442436 | 1_2:-44304172 | None:intergenic |
| ATTGGTCATGTAATTTCCAT+TGG | 0.443960 | 1_2:-44307512 | None:intergenic |
| CCGGCTATCCAGGCTAGCTT+TGG | 0.444727 | 1_2:+44309394 | Msa0071910:three_prime_UTR |
| GCTGTTATAGGCGGCCCATC+AGG | 0.447054 | 1_2:-44306674 | None:intergenic |
| ACTAAGAGATGGAAGGCATT+TGG | 0.447348 | 1_2:+44306709 | Msa0071910:CDS |
| CACCTCTTCCCTCATGCTGA+TGG | 0.451847 | 1_2:+44309312 | Msa0071910:CDS |
| TTCAATACTGACAGGCTGGC+AGG | 0.460536 | 1_2:+44307414 | Msa0071910:intron |
| GGGAAGAGGTGGCCAGAACC+TGG | 0.461101 | 1_2:-44309300 | None:intergenic |
| TTGGTCATGTAATTTCCATT+GGG | 0.464250 | 1_2:-44307511 | None:intergenic |
| GTATTGATCACCGGCTATCC+AGG | 0.465151 | 1_2:+44309384 | Msa0071910:three_prime_UTR |
| GCCTGCAACTGCTGAAACCA+TGG | 0.467218 | 1_2:-44306787 | None:intergenic |
| AATCCATTTCCAAACAATGA+AGG | 0.474443 | 1_2:+44309177 | Msa0071910:CDS |
| CTTTAATGTACGATTTGGAT+CGG | 0.475587 | 1_2:-44307004 | None:intergenic |
| TTTAATGTACGATTTGGATC+GGG | 0.479858 | 1_2:-44307003 | None:intergenic |
| TGATCTTCCTGCAAACTTAA+CGG | 0.480686 | 1_2:+44307476 | Msa0071910:CDS |
| ATAGAAAATTACGGGTGATA+GGG | 0.484130 | 1_2:-44306831 | None:intergenic |
| TTGTTAGGTAGCCTAGTGGC+AGG | 0.485225 | 1_2:-44303916 | None:intergenic |
| GGCCAGAACCTGGAAGTTCA+TGG | 0.494202 | 1_2:-44309290 | None:intergenic |
| AAAATATGTGGCTCTCCTGA+TGG | 0.499572 | 1_2:+44306659 | Msa0071910:CDS |
| TCAGTTTGAATTCTCCGAAA+CGG | 0.513480 | 1_2:-44309429 | None:intergenic |
| ATGTATCGTTGTAGTGTGAC+AGG | 0.520150 | 1_2:-44309240 | None:intergenic |
| ATGGAAATTACATGACCAAT+GGG | 0.522449 | 1_2:+44307515 | Msa0071910:CDS |
| GGCCACCAGAAGTTGACGAC+TGG | 0.528373 | 1_2:-44307453 | None:intergenic |
| TATAAAATCATCTATGTCCA+TGG | 0.533222 | 1_2:+44306770 | Msa0071910:CDS |
| GCCACCAGAAGTTGACGACT+GGG | 0.534398 | 1_2:-44307452 | None:intergenic |
| CCAAAGCTAGCCTGGATAGC+CGG | 0.540104 | 1_2:-44309394 | None:intergenic |
| CACCATCAGCATGAGGGAAG+AGG | 0.543393 | 1_2:-44309314 | None:intergenic |
| AAATATGTGGCTCTCCTGAT+GGG | 0.544519 | 1_2:+44306660 | Msa0071910:CDS |
| GCTCTTTGTCTTGTTTCGAA+AGG | 0.544942 | 1_2:-44307635 | None:intergenic |
| CAAATCCAATATTCAAGTCA+CGG | 0.545788 | 1_2:-44309122 | None:intergenic |
| GAGCAACACGAAGCGCCCAT+TGG | 0.547807 | 1_2:-44307530 | None:intergenic |
| CCAAGAATCAAACTAAGAGA+TGG | 0.548477 | 1_2:+44306698 | Msa0071910:CDS |
| ATTGTATCCTTTGATAGACC+TGG | 0.548650 | 1_2:+44306964 | Msa0071910:CDS |
| TCTCTCACAACAATGGCCAC+TGG | 0.550600 | 1_2:+44304099 | Msa0071910:exon |
| ACTAGCAGTGTTGTTTATTG+GGG | 0.557315 | 1_2:+44306595 | Msa0071910:CDS |
| CCCCAGTCGTCAACTTCTGG+TGG | 0.560902 | 1_2:+44307451 | Msa0071910:CDS |
| GGTTCTGTTCATCTTTGGCA+AGG | 0.561565 | 1_2:+44309198 | Msa0071910:CDS |
| AATGGAAATTACATGACCAA+TGG | 0.565003 | 1_2:+44307514 | Msa0071910:CDS |
| TTGCTGATCAATTGGAATTG+GGG | 0.565301 | 1_2:+44307052 | Msa0071910:CDS |
| ATCAGCTGGAAGCATCCTCA+CGG | 0.571098 | 1_2:-44309642 | None:intergenic |
| TAGGCTTCTGTATTGATCAC+CGG | 0.572160 | 1_2:+44309375 | Msa0071910:exon |
| CAGCTCGTTCTCACACCAGA+AGG | 0.572309 | 1_2:+44304148 | Msa0071910:CDS |
| ACATCGCGCAAAACCTTCCG+TGG | 0.574053 | 1_2:+44309259 | Msa0071910:CDS |
| GTGAATTCTAACCTGCCACT+AGG | 0.575689 | 1_2:+44303905 | Msa0071910:five_prime_UTR |
| AGAGACAGATCGACAAGTAA+GGG | 0.579291 | 1_2:-44304017 | None:intergenic |
| TGAAGGAAGCTGAAAAGAAG+AGG | 0.580727 | 1_2:-44304181 | None:intergenic |
| ATTCTTGGTGCTGTTATAGG+CGG | 0.580740 | 1_2:-44306683 | None:intergenic |
| CGGCCGAAGCCTATTCCCAA+TGG | 0.581823 | 1_2:+44307496 | Msa0071910:CDS |
| CCAAAGCAGGTAAGACAACA+AGG | 0.584374 | 1_2:+44309081 | Msa0071910:intron |
| CAATATTCAAGTCACGGTGG+AGG | 0.590667 | 1_2:-44309116 | None:intergenic |
| GCTCCTCCTCCCAAAATATG+TGG | 0.590810 | 1_2:+44306647 | Msa0071910:CDS |
| ACTGGTGGAACACTCAAAGA+TGG | 0.597899 | 1_2:+44307574 | Msa0071910:CDS |
| TTCCACCAGTATGTTAGCCA+TGG | 0.599195 | 1_2:-44307561 | None:intergenic |
| CTTCTCTTCTCTCACAACAA+TGG | 0.602036 | 1_2:+44304092 | Msa0071910:exon |
| CGCTCACACCATCAGCATGA+GGG | 0.603370 | 1_2:-44309320 | None:intergenic |
| TCAGCTGGAAGCATCCTCAC+GGG | 0.606316 | 1_2:-44309641 | None:intergenic |
| TCCATAACCAGGTCTATCAA+AGG | 0.608223 | 1_2:-44306971 | None:intergenic |
| GGACAATAAAGAGAATTATG+TGG | 0.612355 | 1_2:+44307674 | Msa0071910:CDS |
| CGCCATGGCTAACATACTGG+TGG | 0.613077 | 1_2:+44307559 | Msa0071910:CDS |
| CATGGTAGTGAACCCACGGA+AGG | 0.617397 | 1_2:-44309272 | None:intergenic |
| TCGCTCACACCATCAGCATG+AGG | 0.619842 | 1_2:-44309321 | None:intergenic |
| AATTACGGGTGATAGGGTGT+TGG | 0.623286 | 1_2:-44306825 | None:intergenic |
| GAATCAAACTAAGAGATGGA+AGG | 0.623906 | 1_2:+44306702 | Msa0071910:CDS |
| GGATCACTTTCTCCATAACC+AGG | 0.628496 | 1_2:-44306982 | None:intergenic |
| CATCCTCACGGGAAAAGGTG+AGG | 0.636564 | 1_2:-44309630 | None:intergenic |
| AGCTCGTTCTCACACCAGAA+GGG | 0.638872 | 1_2:+44304149 | Msa0071910:CDS |
| CATTTGGCATACAAAGAGCA+TGG | 0.641716 | 1_2:+44306725 | Msa0071910:CDS |
| AGTTCATGGTAGTGAACCCA+CGG | 0.642351 | 1_2:-44309276 | None:intergenic |
| CATCAGCATGAGGGAAGAGG+TGG | 0.644978 | 1_2:-44309311 | None:intergenic |
| GTGTTGCTCACTACACGCCA+TGG | 0.657333 | 1_2:+44307544 | Msa0071910:CDS |
| GCTTGTGCAGGATGTTGTCA+AGG | 0.658123 | 1_2:+44306927 | Msa0071910:intron |
| CATCGCGCAAAACCTTCCGT+GGG | 0.671853 | 1_2:+44309260 | Msa0071910:CDS |
| GGATGTTGTCAAGGAATTAG+GGG | 0.673580 | 1_2:+44306936 | Msa0071910:intron |
| CAGTTGCAGGCATGACGCTG+TGG | 0.675923 | 1_2:+44306799 | Msa0071910:CDS |
| TTTATCATATGTATTGTGTG+TGG | 0.685314 | 1_2:-44309455 | None:intergenic |
| CCACCAGAAGTTGACGACTG+GGG | 0.688382 | 1_2:-44307451 | None:intergenic |
| ATCCAATATTCAAGTCACGG+TGG | 0.730301 | 1_2:-44309119 | None:intergenic |
CRISPR-GE
| badsite warning | sgRNA_sequence | Strand | Position | Region | GC_content |
|---|---|---|---|---|---|
| !!! | TTGTTTTTTTTTTTTTTGTT+AGG | - | chr1_2:44303934-44303953 | None:intergenic | 10.0% |
| !!! | TAATTATAATTTTTCTATTC+TGG | - | chr1_2:44305844-44305863 | Msa0071920:CDS | 10.0% |
| !! | AAATGTAATATAGAAAATTA+CGG | - | chr1_2:44306843-44306862 | None:intergenic | 10.0% |
| !!! | TAAATTTATAACTTTTTATG+TGG | + | chr1_2:44309055-44309074 | Msa0071910:intron | 10.0% |
| !! | GTTACAAGAAAAAAAAAATT+AGG | + | chr1_2:44304312-44304331 | Msa0071910:intron | 15.0% |
| !!! | TGTATTTTGATATTTACATA+TGG | + | chr1_2:44306487-44306506 | Msa0071910:intron | 15.0% |
| !! | ACAATCTTAAACATAAATTA+TGG | - | chr1_2:44306521-44306540 | None:intergenic | 15.0% |
| !! | AATGTAATATAGAAAATTAC+GGG | - | chr1_2:44306842-44306861 | None:intergenic | 15.0% |
| !! | ATAGAAATAGTTTATACATA+AGG | + | chr1_2:44308173-44308192 | Msa0071910:intron | 15.0% |
| !! | AAATAATACACAGAATAATA+CGG | + | chr1_2:44308425-44308444 | Msa0071910:intron | 15.0% |
| !!! | TTTTAGCTTTCAAAGTTTAA+TGG | + | chr1_2:44304259-44304278 | Msa0071910:intron | 20.0% |
| !!! | TTTAGCTTTCAAAGTTTAAT+GGG | + | chr1_2:44304260-44304279 | Msa0071910:intron | 20.0% |
| !! | AATTAAAAATGTAATCCTGA+AGG | + | chr1_2:44306048-44306067 | Msa0071910:intron | 20.0% |
| !! | AACTACAAATAAGCTAAATA+AGG | - | chr1_2:44307372-44307391 | None:intergenic | 20.0% |
| !!! | TCAAAATTGACTTTGAATTT+TGG | + | chr1_2:44307794-44307813 | Msa0071910:intron | 20.0% |
| !! | AAAAATAAACACATGTATCA+CGG | - | chr1_2:44307900-44307919 | None:intergenic | 20.0% |
| !! | AATAATTTGAAAACAGCTTA+TGG | - | chr1_2:44308079-44308098 | None:intergenic | 20.0% |
| !! | AATCATCTAAAAGATTGATT+CGG | - | chr1_2:44308594-44308613 | None:intergenic | 20.0% |
| !!! | TCAATCTTTTAGATGATTAT+TGG | + | chr1_2:44308596-44308615 | Msa0071910:intron | 20.0% |
| !!! | TTTTAAAATTTACAGAAGCT+GGG | + | chr1_2:44309548-44309567 | Msa0071910:three_prime_UTR | 20.0% |
| ! | AAACAAACAAAAAGACAGAT+CGG | + | chr1_2:44303948-44303967 | Msa0071910:five_prime_UTR | 25.0% |
| ! | TGAATATAGAATGATGAAGA+TGG | + | chr1_2:44304336-44304355 | Msa0071910:intron | 25.0% |
| !!! | ATATTGCTTCTTTTTTCCTA+GGG | - | chr1_2:44304887-44304906 | Msa0071920:intron | 25.0% |
| !!! | AATATTGCTTCTTTTTTCCT+AGG | - | chr1_2:44304888-44304907 | Msa0071920:intron | 25.0% |
| !!! | AAGAAGCAATATTTTTAGTG+CGG | + | chr1_2:44304895-44304914 | Msa0071910:intron | 25.0% |
| ! | AATATCAATGTCATTGAGAA+GGG | + | chr1_2:44305128-44305147 | Msa0071910:intron | 25.0% |
| ! | GGTATCTTAAAATTCTTTCT+GGG | - | chr1_2:44305305-44305324 | Msa0071920:intron | 25.0% |
| ! | TGGTATCTTAAAATTCTTTC+TGG | - | chr1_2:44305306-44305325 | Msa0071920:intron | 25.0% |
| ! | AACTTTGGCATAAAATATCT+TGG | - | chr1_2:44305326-44305345 | Msa0071920:CDS | 25.0% |
| !! | GAGCAAAAAAATAAAAGTGT+TGG | - | chr1_2:44305871-44305890 | Msa0071920:CDS | 25.0% |
| ! | TATTTGTATTCGGAAATTCA+AGG | + | chr1_2:44306105-44306124 | Msa0071910:intron | 25.0% |
| ! | TATTTATCTGCCTTCTAATT+TGG | + | chr1_2:44306540-44306559 | Msa0071910:intron | 25.0% |
| ! | TATAAAATCATCTATGTCCA+TGG | + | chr1_2:44306770-44306789 | Msa0071910:CDS | 25.0% |
| ! | ACTTATTAGAGTTTATCTAC+TGG | + | chr1_2:44307175-44307194 | Msa0071910:intron | 25.0% |
| ! | CAGTAATCACACTAATAATT+GGG | - | chr1_2:44307602-44307621 | None:intergenic | 25.0% |
| !! | CTTTTAGATGATTGCAAAAT+TGG | + | chr1_2:44307708-44307727 | Msa0071910:intron | 25.0% |
| !!! | ATTTAGCTGATAGTTTTGAT+TGG | + | chr1_2:44307762-44307781 | Msa0071910:intron | 25.0% |
| ! | GATATTCACATAAACAATCA+CGG | - | chr1_2:44307820-44307839 | None:intergenic | 25.0% |
| ! | TGATTGTTTATGTGAATATC+AGG | + | chr1_2:44307820-44307839 | Msa0071910:intron | 25.0% |
| ! | TCTGTATTCATAAATTATCC+TGG | - | chr1_2:44308114-44308133 | None:intergenic | 25.0% |
| ! | CTAAGAAATCGAGAATAATA+AGG | - | chr1_2:44308244-44308263 | None:intergenic | 25.0% |
| ! | CTTATTATTCTCGATTTCTT+AGG | + | chr1_2:44308242-44308261 | Msa0071910:intron | 25.0% |
| !! | ATCATCTAAAAGATTGATTC+GGG | - | chr1_2:44308593-44308612 | None:intergenic | 25.0% |
| ! | TAACAACTTTCTAAATAAGC+TGG | - | chr1_2:44308656-44308675 | None:intergenic | 25.0% |
| ! | AGGGAAAATTGATAAATACA+AGG | - | chr1_2:44308740-44308759 | None:intergenic | 25.0% |
| ! | TATTATGCTCAATTGAATTG+AGG | - | chr1_2:44308986-44309005 | None:intergenic | 25.0% |
| ! | TGAATATTGGATTTGGAAAA+TGG | + | chr1_2:44309130-44309149 | Msa0071910:CDS | 25.0% |
| ! | GAATATTGGATTTGGAAAAT+GGG | + | chr1_2:44309131-44309150 | Msa0071910:CDS | 25.0% |
| !!! | ACTATCATTAAGTCACTTTT+AGG | + | chr1_2:44309345-44309364 | Msa0071910:CDS | 25.0% |
| ! | TTTATCATATGTATTGTGTG+TGG | - | chr1_2:44309458-44309477 | None:intergenic | 25.0% |
| !!! | CTTTTAAAATTTACAGAAGC+TGG | + | chr1_2:44309547-44309566 | Msa0071910:three_prime_UTR | 25.0% |
| !!! | TGTTGATTTTGAGATGTATT+TGG | + | chr1_2:44309572-44309591 | Msa0071910:three_prime_UTR | 25.0% |
| AACAAACAAAAAGACAGATC+GGG | + | chr1_2:44303949-44303968 | Msa0071910:five_prime_UTR | 30.0% | |
| CTGTATTAGTTCAGTTAGTT+AGG | + | chr1_2:44304468-44304487 | Msa0071910:intron | 30.0% | |
| TGTATCAATCTTCAACTTGT+GGG | - | chr1_2:44304541-44304560 | None:intergenic | 30.0% | |
| ATGTATCAATCTTCAACTTG+TGG | - | chr1_2:44304542-44304561 | None:intergenic | 30.0% | |
| ATCGATACTTGTAAATGAGA+TGG | + | chr1_2:44304570-44304589 | Msa0071910:intron | 30.0% | |
| !! | CAAAACCTGTTTTTCATGAA+CGG | - | chr1_2:44304686-44304705 | Msa0071920:CDS | 30.0% |
| !!! | TATTGCTTCTTTTTTCCTAG+GGG | - | chr1_2:44304886-44304905 | Msa0071920:intron | 30.0% |
| !! | TTGAAAGGTTTACTGATTCA+GGG | - | chr1_2:44304999-44305018 | Msa0071920:intron | 30.0% |
| CAATATCAATGTCATTGAGA+AGG | + | chr1_2:44305127-44305146 | Msa0071910:intron | 30.0% | |
| CTCACTTTACTTTCTATCTT+GGG | - | chr1_2:44305227-44305246 | Msa0071920:intron | 30.0% | |
| TTTCCTTCATTGAGAGTTAA+AGG | - | chr1_2:44305634-44305653 | Msa0071920:intron | 30.0% | |
| !! | ACAATAGAGGTATTCATGAA+TGG | + | chr1_2:44305998-44306017 | Msa0071910:intron | 30.0% |
| AACAACACTCTGATAACTAT+AGG | + | chr1_2:44306333-44306352 | Msa0071910:intron | 30.0% | |
| TAGCTATAAACCTCATACTA+AGG | - | chr1_2:44306431-44306450 | None:intergenic | 30.0% | |
| AATTACAATATGCTGAACAC+AGG | - | chr1_2:44306460-44306479 | None:intergenic | 30.0% | |
| GTTTGTAATGCCAAATTAGA+AGG | - | chr1_2:44306553-44306572 | None:intergenic | 30.0% | |
| ! | TTATACTTTGCTGTGTCTTT+AGG | - | chr1_2:44306755-44306774 | None:intergenic | 30.0% |
| ATAGAAAATTACGGGTGATA+GGG | - | chr1_2:44306834-44306853 | None:intergenic | 30.0% | |
| TATAGAAAATTACGGGTGAT+AGG | - | chr1_2:44306835-44306854 | None:intergenic | 30.0% | |
| ! | TTTAATGTACGATTTGGATC+GGG | - | chr1_2:44307006-44307025 | None:intergenic | 30.0% |
| ! | CTTTAATGTACGATTTGGAT+CGG | - | chr1_2:44307007-44307026 | None:intergenic | 30.0% |
| ATGCTCTTTAATGTACGATT+TGG | - | chr1_2:44307012-44307031 | None:intergenic | 30.0% | |
| AGTACCAATGACATAGAATT+TGG | - | chr1_2:44307079-44307098 | None:intergenic | 30.0% | |
| ATAAAAACTTGTGAGACTCT+TGG | + | chr1_2:44307199-44307218 | Msa0071910:intron | 30.0% | |
| TAAAAACTTGTGAGACTCTT+GGG | + | chr1_2:44307200-44307219 | Msa0071910:intron | 30.0% | |
| TGCTTTGATATAAGCTATCT+TGG | - | chr1_2:44307291-44307310 | None:intergenic | 30.0% | |
| ATGTAATTTCCATTGGGAAT+AGG | - | chr1_2:44307508-44307527 | None:intergenic | 30.0% | |
| TTGGTCATGTAATTTCCATT+GGG | - | chr1_2:44307514-44307533 | None:intergenic | 30.0% | |
| ATTGGTCATGTAATTTCCAT+TGG | - | chr1_2:44307515-44307534 | None:intergenic | 30.0% | |
| AATGGAAATTACATGACCAA+TGG | + | chr1_2:44307514-44307533 | Msa0071910:CDS | 30.0% | |
| ATGGAAATTACATGACCAAT+GGG | + | chr1_2:44307515-44307534 | Msa0071910:CDS | 30.0% | |
| CCAGTAATCACACTAATAAT+TGG | - | chr1_2:44307603-44307622 | None:intergenic | 30.0% | |
| CCAATTATTAGTGTGATTAC+TGG | + | chr1_2:44307600-44307619 | Msa0071910:CDS | 30.0% | |
| GGACAATAAAGAGAATTATG+TGG | + | chr1_2:44307674-44307693 | Msa0071910:CDS | 30.0% | |
| TCAAATAAGTCAATCCAAAC+AGG | - | chr1_2:44307993-44308012 | None:intergenic | 30.0% | |
| ! | AAAACCACAATAGTTTGTCT+TGG | + | chr1_2:44308384-44308403 | Msa0071910:intron | 30.0% |
| !!! | AGTTTTTCAAGGAACCATAA+GGG | - | chr1_2:44308512-44308531 | None:intergenic | 30.0% |
| !!! | AAGTTTTTCAAGGAACCATA+AGG | - | chr1_2:44308513-44308532 | None:intergenic | 30.0% |
| ! | TTATGCCAAGAAGTTTTTCA+AGG | - | chr1_2:44308523-44308542 | None:intergenic | 30.0% |
| ATAACGAGGTAATCAATCTT+CGG | + | chr1_2:44308539-44308558 | Msa0071910:intron | 30.0% | |
| CAAATCCAATATTCAAGTCA+CGG | - | chr1_2:44309125-44309144 | None:intergenic | 30.0% | |
| AAAATGGGAATATACTCCTT+TGG | + | chr1_2:44309146-44309165 | Msa0071910:CDS | 30.0% | |
| !! | AATGGATTTTGAAGATCCAA+AGG | - | chr1_2:44309165-44309184 | None:intergenic | 30.0% |
| AATCCATTTCCAAACAATGA+AGG | + | chr1_2:44309177-44309196 | Msa0071910:CDS | 30.0% | |
| ! | TTTGAGATGTATTTGGTGAT+AGG | + | chr1_2:44309579-44309598 | Msa0071910:three_prime_UTR | 30.0% |
| !!! | TTTTTTGTTAGGTAGCCTAG+TGG | - | chr1_2:44303923-44303942 | None:intergenic | 35.0% |
| ACAAACAAAAAGACAGATCG+GGG | + | chr1_2:44303950-44303969 | Msa0071910:five_prime_UTR | 35.0% | |
| ! | AATTTTTCTGCTAACTCCAG+TGG | - | chr1_2:44304118-44304137 | None:intergenic | 35.0% |
| CTGAAAAGAAGAGGATTTGT+TGG | - | chr1_2:44304175-44304194 | None:intergenic | 35.0% | |
| CTTTGAGCAAGAAAAGAGAA+AGG | - | chr1_2:44304232-44304251 | None:intergenic | 35.0% | |
| !! | GTTCTTCAGCTTTAGAATTG+TGG | + | chr1_2:44304290-44304309 | Msa0071910:intron | 35.0% |
| TATCAATCTTCAACTTGTGG+GGG | - | chr1_2:44304539-44304558 | None:intergenic | 35.0% | |
| GTATCAATCTTCAACTTGTG+GGG | - | chr1_2:44304540-44304559 | None:intergenic | 35.0% | |
| TTTGTCCGTTCATGAAAAAC+AGG | + | chr1_2:44304678-44304697 | Msa0071910:intron | 35.0% | |
| ! | AAACAGGTTTTGCAGTATTG+TGG | + | chr1_2:44304694-44304713 | Msa0071910:intron | 35.0% |
| TGTAGAATGCCATGTAATCA+AGG | + | chr1_2:44304857-44304876 | Msa0071910:intron | 35.0% | |
| TATAGTAATTCCGATTGAGC+TGG | - | chr1_2:44304936-44304955 | Msa0071920:intron | 35.0% | |
| ! | TTCAGGGAATTTTCTTCAGT+GGG | - | chr1_2:44304983-44305002 | Msa0071920:intron | 35.0% |
| ! | ATTCAGGGAATTTTCTTCAG+TGG | - | chr1_2:44304984-44305003 | Msa0071920:intron | 35.0% |
| !! | CTTGAAAGGTTTACTGATTC+AGG | - | chr1_2:44305000-44305019 | Msa0071920:intron | 35.0% |
| TGCTCAAATCACTACTTGAA+AGG | - | chr1_2:44305014-44305033 | Msa0071920:intron | 35.0% | |
| CCTCACTTTACTTTCTATCT+TGG | - | chr1_2:44305228-44305247 | Msa0071920:intron | 35.0% | |
| CCAAGATAGAAAGTAAAGTG+AGG | + | chr1_2:44305225-44305244 | Msa0071910:intron | 35.0% | |
| TTATGCCAAAGTTGTTGTCA+AGG | + | chr1_2:44305333-44305352 | Msa0071910:intron | 35.0% | |
| AGTATCCTTGACAACAACTT+TGG | - | chr1_2:44305341-44305360 | Msa0071920:CDS | 35.0% | |
| ATAAATGAGGAGGGTTGTAT+AGG | + | chr1_2:44305415-44305434 | Msa0071910:intron | 35.0% | |
| ATAGGAGTAAGTTGTGATGT+TGG | + | chr1_2:44305433-44305452 | Msa0071910:intron | 35.0% | |
| GAATGCTAAGCTCAAAAGTA+AGG | + | chr1_2:44305487-44305506 | Msa0071910:intron | 35.0% | |
| TAATACAAGCGAGTAGAGAA+TGG | - | chr1_2:44305529-44305548 | Msa0071920:CDS | 35.0% | |
| CTTCATTGAGAGTTAAAGGA+GGG | - | chr1_2:44305630-44305649 | Msa0071920:intron | 35.0% | |
| GCATATTCAACAATGAAACG+CGG | - | chr1_2:44305664-44305683 | Msa0071920:intron | 35.0% | |
| TTGCCTTCGCTATCATTAAA+GGG | - | chr1_2:44305689-44305708 | Msa0071920:intron | 35.0% | |
| ATTGCCTTCGCTATCATTAA+AGG | - | chr1_2:44305690-44305709 | Msa0071920:intron | 35.0% | |
| !! | CATTTTAGCAACCTGAGAAA+CGG | + | chr1_2:44305728-44305747 | Msa0071910:intron | 35.0% |
| TTTCATTAACACCGTTTCTC+AGG | - | chr1_2:44305742-44305761 | Msa0071920:CDS | 35.0% | |
| AGTCAAAAGGAAGACAGAAA+CGG | - | chr1_2:44305775-44305794 | Msa0071920:CDS | 35.0% | |
| TCTATTCTGGACAAACTTGT+TGG | - | chr1_2:44305831-44305850 | Msa0071920:CDS | 35.0% | |
| TCTAAGTAGTTAGAGGATTC+AGG | + | chr1_2:44305924-44305943 | Msa0071910:intron | 35.0% | |
| CTAAGTAGTTAGAGGATTCA+GGG | + | chr1_2:44305925-44305944 | Msa0071910:intron | 35.0% | |
| TTGTGGCTAGAGGAAATATT+GGG | + | chr1_2:44305975-44305994 | Msa0071910:intron | 35.0% | |
| AGGAAATATTGGGACAATAG+AGG | + | chr1_2:44305985-44306004 | Msa0071910:intron | 35.0% | |
| AATGGAATGAGTGCAATTAG+AGG | + | chr1_2:44306016-44306035 | Msa0071910:intron | 35.0% | |
| AAAATGTAATCCTGAAGGTG+AGG | + | chr1_2:44306053-44306072 | Msa0071910:intron | 35.0% | |
| TGCGAGTGTCTATTTGTATT+CGG | + | chr1_2:44306095-44306114 | Msa0071910:intron | 35.0% | |
| TGGGAAAATCTTCTCATTGA+AGG | + | chr1_2:44306273-44306292 | Msa0071910:intron | 35.0% | |
| TCTAGAGACTAGAAACTAAC+AGG | + | chr1_2:44306303-44306322 | Msa0071910:intron | 35.0% | |
| AATCTTGAATCAATCCCTGT+CGG | + | chr1_2:44306405-44306424 | Msa0071910:intron | 35.0% | |
| ATTTGGCATTACAAACTCTC+AGG | + | chr1_2:44306557-44306576 | Msa0071910:intron | 35.0% | |
| !! | ACACTAGCAGTGTTGTTTAT+TGG | + | chr1_2:44306593-44306612 | Msa0071910:CDS | 35.0% |
| !! | CACTAGCAGTGTTGTTTATT+GGG | + | chr1_2:44306594-44306613 | Msa0071910:CDS | 35.0% |
| !! | ACTAGCAGTGTTGTTTATTG+GGG | + | chr1_2:44306595-44306614 | Msa0071910:CDS | 35.0% |
| !! | TTGATTCTTGGTGCTGTTAT+AGG | - | chr1_2:44306689-44306708 | None:intergenic | 35.0% |
| ! | CCATCTCTTAGTTTGATTCT+TGG | - | chr1_2:44306701-44306720 | None:intergenic | 35.0% |
| CCAAGAATCAAACTAAGAGA+TGG | + | chr1_2:44306698-44306717 | Msa0071910:CDS | 35.0% | |
| GAATCAAACTAAGAGATGGA+AGG | + | chr1_2:44306702-44306721 | Msa0071910:CDS | 35.0% | |
| TATTTAATGTGAGCTTGTGC+AGG | + | chr1_2:44306915-44306934 | Msa0071910:intron | 35.0% | |
| AGGATGTTGTCAAGGAATTA+GGG | + | chr1_2:44306935-44306954 | Msa0071910:intron | 35.0% | |
| ATTGTATCCTTTGATAGACC+TGG | + | chr1_2:44306964-44306983 | Msa0071910:CDS | 35.0% | |
| AGCAAGCTCTTCTATATCTA+AGG | - | chr1_2:44307037-44307056 | None:intergenic | 35.0% | |
| CTTGCTGATCAATTGGAATT+GGG | + | chr1_2:44307051-44307070 | Msa0071910:CDS | 35.0% | |
| TTGCTGATCAATTGGAATTG+GGG | + | chr1_2:44307052-44307071 | Msa0071910:CDS | 35.0% | |
| AACTCTAAATTGTACCTGTG+AGG | - | chr1_2:44307144-44307163 | None:intergenic | 35.0% | |
| AAAAACTTGTGAGACTCTTG+GGG | + | chr1_2:44307201-44307220 | Msa0071910:intron | 35.0% | |
| !!! | CAACCTTTTTCAATACTGAC+AGG | + | chr1_2:44307406-44307425 | Msa0071910:intron | 35.0% |
| TGATCTTCCTGCAAACTTAA+CGG | + | chr1_2:44307476-44307495 | Msa0071910:CDS | 35.0% | |
| ! | TCTTGTTTCGAAAGGATATC+TGG | - | chr1_2:44307630-44307649 | None:intergenic | 35.0% |
| ! | AGAGCTTGTAACTAAGTTGA+TGG | + | chr1_2:44307653-44307672 | Msa0071910:CDS | 35.0% |
| GTTTGTGGCATATATTCTCT+TGG | + | chr1_2:44307867-44307886 | Msa0071910:intron | 35.0% | |
| TCAAAAACAGAAGACATCGT+AGG | - | chr1_2:44307938-44307957 | None:intergenic | 35.0% | |
| ATGAACAACTTTCACTGCTT+AGG | + | chr1_2:44307966-44307985 | Msa0071910:intron | 35.0% | |
| ATTATTTCCATAAGCTCTCC+AGG | + | chr1_2:44308093-44308112 | Msa0071910:intron | 35.0% | |
| AAATTATCCTGGAGAGCTTA+TGG | - | chr1_2:44308103-44308122 | None:intergenic | 35.0% | |
| CTAACCAAGACAAACTATTG+TGG | - | chr1_2:44308391-44308410 | None:intergenic | 35.0% | |
| TGGTTCCTTGAAAAACTTCT+TGG | + | chr1_2:44308515-44308534 | Msa0071910:intron | 35.0% | |
| AAAAACTTCTTGGCATAACG+AGG | + | chr1_2:44308525-44308544 | Msa0071910:intron | 35.0% | |
| !! | AAGATTGATTCGGGCAAAAT+TGG | - | chr1_2:44308584-44308603 | None:intergenic | 35.0% |
| CAACTTTCTAAATAAGCTGG+AGG | - | chr1_2:44308653-44308672 | None:intergenic | 35.0% | |
| ACTCTGAGTCAATAAACTTC+AGG | - | chr1_2:44308782-44308801 | None:intergenic | 35.0% | |
| !!! | TTATTGACTCAGAGTCCTTT+TGG | + | chr1_2:44308787-44308806 | Msa0071910:intron | 35.0% |
| CTGCAACATCAATTACCAAA+AGG | - | chr1_2:44308805-44308824 | None:intergenic | 35.0% | |
| GAATCTGATAATCTGAGAAG+TGG | + | chr1_2:44308928-44308947 | Msa0071910:intron | 35.0% | |
| ! | GAGGCTAATCTGAAATTTGA+AGG | - | chr1_2:44308967-44308986 | None:intergenic | 35.0% |
| CGTGACTTGAATATTGGATT+TGG | + | chr1_2:44309123-44309142 | Msa0071910:CDS | 35.0% | |
| GAACCTTCATTGTTTGGAAA+TGG | - | chr1_2:44309183-44309202 | None:intergenic | 35.0% | |
| TGAACAGAACCTTCATTGTT+TGG | - | chr1_2:44309189-44309208 | None:intergenic | 35.0% | |
| ATGAAGGTTCTGTTCATCTT+TGG | + | chr1_2:44309193-44309212 | Msa0071910:CDS | 35.0% | |
| GCAAGGAGATGAAGATATTA+TGG | + | chr1_2:44309215-44309234 | Msa0071910:CDS | 35.0% | |
| GGCATTTATTATCTCCGTTT+CGG | + | chr1_2:44309415-44309434 | Msa0071910:three_prime_UTR | 35.0% | |
| TCAGTTTGAATTCTCCGAAA+CGG | - | chr1_2:44309432-44309451 | None:intergenic | 35.0% | |
| AGAGACAGATCGACAAGTAA+GGG | - | chr1_2:44304020-44304039 | None:intergenic | 40.0% | |
| CTTCTCTTCTCTCACAACAA+TGG | + | chr1_2:44304092-44304111 | Msa0071910:exon | 40.0% | |
| TGAAGGAAGCTGAAAAGAAG+AGG | - | chr1_2:44304184-44304203 | None:intergenic | 40.0% | |
| ! | TCTTCTTTTCAGCTTCCTTC+AGG | + | chr1_2:44304183-44304202 | Msa0071910:CDS | 40.0% |
| !! | TTTTCAGCTTCCTTCAGGTT+GGG | + | chr1_2:44304188-44304207 | Msa0071910:intron | 40.0% |
| ATCAATCTTCAACTTGTGGG+GGG | - | chr1_2:44304538-44304557 | None:intergenic | 40.0% | |
| ATGAGATGGAAGAAATGCTG+AGG | + | chr1_2:44304584-44304603 | Msa0071910:intron | 40.0% | |
| GTGCTTTGGTGAAGATCTAA+TGG | + | chr1_2:44304612-44304631 | Msa0071910:intron | 40.0% | |
| TCTTGAGATTGATTACCGTG+CGG | - | chr1_2:44304655-44304674 | Msa0071920:CDS | 40.0% | |
| ! | AGGTTTTGCAGTATTGTGGA+AGG | + | chr1_2:44304698-44304717 | Msa0071910:intron | 40.0% |
| !!! | GTGGAAGGTGCTTTTGTTAT+CGG | + | chr1_2:44304713-44304732 | Msa0071910:intron | 40.0% |
| TAAGTCAGTAAGCGAGTAAC+TGG | + | chr1_2:44304776-44304795 | Msa0071910:intron | 40.0% | |
| TAGGGGATTCCTTGATTACA+TGG | - | chr1_2:44304869-44304888 | Msa0071920:intron | 40.0% | |
| ATGTAATCAAGGAATCCCCT+AGG | + | chr1_2:44304868-44304887 | Msa0071910:intron | 40.0% | |
| !! | ACTAGCCTTGGATTGGAATT+GGG | + | chr1_2:44305051-44305070 | Msa0071910:intron | 40.0% |
| TGAACGGGAAATGTGATATC+AGG | + | chr1_2:44305082-44305101 | Msa0071910:intron | 40.0% | |
| AAATGTGATATCAGGCCTAG+TGG | + | chr1_2:44305090-44305109 | Msa0071910:intron | 40.0% | |
| GCATTTACTTAACGACCACT+AGG | - | chr1_2:44305108-44305127 | Msa0071920:intron | 40.0% | |
| ATTTGCACCACGATGATGAT+GGG | - | chr1_2:44305155-44305174 | Msa0071920:intron | 40.0% | |
| TCGTGGTGCAAATGAAAACT+AGG | + | chr1_2:44305162-44305181 | Msa0071910:intron | 40.0% | |
| AAGTGAGGCAGTGTTGTATT+TGG | + | chr1_2:44305240-44305259 | Msa0071910:intron | 40.0% | |
| GCAGTGTTGTATTTGGCAAA+TGG | + | chr1_2:44305247-44305266 | Msa0071910:intron | 40.0% | |
| TTTATGTGGCCGATATTGTC+CGG | - | chr1_2:44305400-44305419 | Msa0071920:CDS | 40.0% | |
| CAATATCGGCCACATAAATG+AGG | + | chr1_2:44305402-44305421 | Msa0071910:intron | 40.0% | |
| TACAACCCTCCTCATTTATG+TGG | - | chr1_2:44305414-44305433 | Msa0071920:CDS | 40.0% | |
| TGCTAAGCTCAAAAGTAAGG+TGG | + | chr1_2:44305490-44305509 | Msa0071910:intron | 40.0% | |
| GGGAAGAGTTCATGAAACTT+GGG | + | chr1_2:44305587-44305606 | Msa0071910:intron | 40.0% | |
| GGAAGAGTTCATGAAACTTG+GGG | + | chr1_2:44305588-44305607 | Msa0071910:intron | 40.0% | |
| CCTTCATTGAGAGTTAAAGG+AGG | - | chr1_2:44305631-44305650 | Msa0071920:intron | 40.0% | |
| CCTCCTTTAACTCTCAATGA+AGG | + | chr1_2:44305628-44305647 | Msa0071910:intron | 40.0% | |
| TTGCTAAAATGGCTACTGTG+AGG | - | chr1_2:44305719-44305738 | Msa0071920:intron | 40.0% | |
| ! | CGTTTCTCAGGTTGCTAAAA+TGG | - | chr1_2:44305730-44305749 | Msa0071920:CDS | 40.0% |
| AAAGGAAGACAGAAACGGAA+GGG | - | chr1_2:44305770-44305789 | Msa0071920:CDS | 40.0% | |
| AAAAGGAAGACAGAAACGGA+AGG | - | chr1_2:44305771-44305790 | Msa0071920:CDS | 40.0% | |
| AATGGGTGTACAGAGTCAAA+AGG | - | chr1_2:44305788-44305807 | Msa0071920:CDS | 40.0% | |
| CACTTCTATCGGCAGTAAAT+GGG | - | chr1_2:44305805-44305824 | Msa0071920:CDS | 40.0% | |
| TCACTTCTATCGGCAGTAAA+TGG | - | chr1_2:44305806-44305825 | Msa0071920:CDS | 40.0% | |
| CAATATTTCCTCTAGCCACA+AGG | - | chr1_2:44305976-44305995 | Msa0071920:CDS | 40.0% | |
| CTTGTGGCTAGAGGAAATAT+TGG | + | chr1_2:44305974-44305993 | Msa0071910:intron | 40.0% | |
| TATTCGGAAATTCAAGGCCA+GGG | + | chr1_2:44306111-44306130 | Msa0071910:intron | 40.0% | |
| ! | TGTTTATTGGGGTTCTAGCA+TGG | + | chr1_2:44306606-44306625 | Msa0071910:CDS | 40.0% |
| ! | GTTTATTGGGGTTCTAGCAT+GGG | + | chr1_2:44306607-44306626 | Msa0071910:CDS | 40.0% |
| ! | TCAGGAGAGCCACATATTTT+GGG | - | chr1_2:44306659-44306678 | None:intergenic | 40.0% |
| ! | ATCAGGAGAGCCACATATTT+TGG | - | chr1_2:44306660-44306679 | None:intergenic | 40.0% |
| AAAATATGTGGCTCTCCTGA+TGG | + | chr1_2:44306659-44306678 | Msa0071910:CDS | 40.0% | |
| AAATATGTGGCTCTCCTGAT+GGG | + | chr1_2:44306660-44306679 | Msa0071910:CDS | 40.0% | |
| !! | ATTCTTGGTGCTGTTATAGG+CGG | - | chr1_2:44306686-44306705 | None:intergenic | 40.0% |
| !! | ACTAAGAGATGGAAGGCATT+TGG | + | chr1_2:44306709-44306728 | Msa0071910:CDS | 40.0% |
| CATTTGGCATACAAAGAGCA+TGG | + | chr1_2:44306725-44306744 | Msa0071910:CDS | 40.0% | |
| CAGGATGTTGTCAAGGAATT+AGG | + | chr1_2:44306934-44306953 | Msa0071910:intron | 40.0% | |
| GGATGTTGTCAAGGAATTAG+GGG | + | chr1_2:44306936-44306955 | Msa0071910:intron | 40.0% | |
| TCCTTTGATAGACCTGGTTA+TGG | + | chr1_2:44306970-44306989 | Msa0071910:CDS | 40.0% | |
| TCCATAACCAGGTCTATCAA+AGG | - | chr1_2:44306974-44306993 | None:intergenic | 40.0% | |
| !! | AGAAGAGCTTGCTGATCAAT+TGG | + | chr1_2:44307044-44307063 | Msa0071910:CDS | 40.0% |
| ! | GCTTGCTGATCAATTGGAAT+TGG | + | chr1_2:44307050-44307069 | Msa0071910:CDS | 40.0% |
| GGGTCCAAATTCTATGTCAT+TGG | + | chr1_2:44307072-44307091 | Msa0071910:intron | 40.0% | |
| TATGTCATTGGTACTTCCCT+GGG | + | chr1_2:44307084-44307103 | Msa0071910:intron | 40.0% | |
| AAGCTATCTTGGAGAGCTTA+TGG | - | chr1_2:44307280-44307299 | None:intergenic | 40.0% | |
| ! | CAGCCTGTCAGTATTGAAAA+AGG | - | chr1_2:44307412-44307431 | None:intergenic | 40.0% |
| !!! | CTTTTTCAATACTGACAGGC+TGG | + | chr1_2:44307410-44307429 | Msa0071910:intron | 40.0% |
| GTTAAGTTTGCAGGAAGATC+AGG | - | chr1_2:44307477-44307496 | None:intergenic | 40.0% | |
| TTTCCATTGGGAATAGGCTT+CGG | - | chr1_2:44307502-44307521 | None:intergenic | 40.0% | |
| !! | GCTCTTTGTCTTGTTTCGAA+AGG | - | chr1_2:44307638-44307657 | None:intergenic | 40.0% |
| AGCTGCACAAATTCAGTTTG+TGG | + | chr1_2:44307852-44307871 | Msa0071910:intron | 40.0% | |
| AGCACTTGTGAGACTGTTTA+TGG | + | chr1_2:44308035-44308054 | Msa0071910:intron | 40.0% | |
| CTCATGCTTTGTAATCATGC+TGG | + | chr1_2:44308356-44308375 | Msa0071910:intron | 40.0% | |
| GCATGATCATGTCTTCTAGA+TGG | + | chr1_2:44308480-44308499 | Msa0071910:intron | 40.0% | |
| TGATCATGTCTTCTAGATGG+AGG | + | chr1_2:44308483-44308502 | Msa0071910:intron | 40.0% | |
| GAGGTAATCAATCTTCGGAA+TGG | + | chr1_2:44308544-44308563 | Msa0071910:intron | 40.0% | |
| TTTCCAACCATTCGGGTAAA+GGG | - | chr1_2:44308630-44308649 | None:intergenic | 40.0% | |
| TGAGACGAGCATTTAGTAGA+AGG | - | chr1_2:44309025-44309044 | None:intergenic | 40.0% | |
| ! | TTTTATGTGGCTTCCAAAGC+AGG | + | chr1_2:44309068-44309087 | Msa0071910:intron | 40.0% |
| ATCCAATATTCAAGTCACGG+TGG | - | chr1_2:44309122-44309141 | None:intergenic | 40.0% | |
| ATGTATCGTTGTAGTGTGAC+AGG | - | chr1_2:44309243-44309262 | None:intergenic | 40.0% | |
| !!! | GTCACTTTTAGGTGTGAAGT+AGG | + | chr1_2:44309356-44309375 | Msa0071910:CDS | 40.0% |
| ! | TAGGCTTCTGTATTGATCAC+CGG | + | chr1_2:44309375-44309394 | Msa0071910:exon | 40.0% |
| AATAAATGCCAAAGCTAGCC+TGG | - | chr1_2:44309405-44309424 | None:intergenic | 40.0% | |
| GTGAATTCTAACCTGCCACT+AGG | + | chr1_2:44303905-44303924 | Msa0071910:five_prime_UTR | 45.0% | |
| CAGAGACAGATCGACAAGTA+AGG | - | chr1_2:44304021-44304040 | None:intergenic | 45.0% | |
| ! | CTTTTCAGCTTCCTTCAGGT+TGG | + | chr1_2:44304187-44304206 | Msa0071910:intron | 45.0% |
| !! | ATGCTGAGGAAGAAGTGCTT+TGG | + | chr1_2:44304598-44304617 | Msa0071910:intron | 45.0% |
| AGTTTCACATTCTTGCCGCA+CGG | + | chr1_2:44304637-44304656 | Msa0071910:intron | 45.0% | |
| !!! | ATTTTTAGTGCGGCGTGAGT+CGG | + | chr1_2:44304905-44304924 | Msa0071910:intron | 45.0% |
| !! | GGCTAGTGTGTGTCATTTCA+AGG | - | chr1_2:44305038-44305057 | Msa0071920:intron | 45.0% |
| ! | GAAATGACACACACTAGCCT+TGG | + | chr1_2:44305039-44305058 | Msa0071910:intron | 45.0% |
| !! | CACTAGCCTTGGATTGGAAT+TGG | + | chr1_2:44305050-44305069 | Msa0071910:intron | 45.0% |
| ACTCTCCCAATTCCAATCCA+AGG | - | chr1_2:44305059-44305078 | Msa0071920:intron | 45.0% | |
| GAATTGGGAGAGTAGCTGAA+CGG | + | chr1_2:44305066-44305085 | Msa0071910:intron | 45.0% | |
| AATTGGGAGAGTAGCTGAAC+GGG | + | chr1_2:44305067-44305086 | Msa0071910:intron | 45.0% | |
| ! | TTTGCACCACGATGATGATG+GGG | - | chr1_2:44305154-44305173 | Msa0071920:intron | 45.0% |
| CATTTGCACCACGATGATGA+TGG | - | chr1_2:44305156-44305175 | Msa0071920:intron | 45.0% | |
| GGTTCCATAGCAGTTGAAAC+CGG | + | chr1_2:44305183-44305202 | Msa0071910:intron | 45.0% | |
| ! | CAAACCGGTTTCAACTGCTA+TGG | - | chr1_2:44305190-44305209 | Msa0071920:intron | 45.0% |
| TTCTATCTTGGGCTTGTCCT+TGG | - | chr1_2:44305216-44305235 | Msa0071920:intron | 45.0% | |
| GACGTTGCTCACTCATCTAA+AGG | - | chr1_2:44305278-44305297 | Msa0071920:intron | 45.0% | |
| TAGATGAGTGAGCAACGTCA+AGG | + | chr1_2:44305279-44305298 | Msa0071910:intron | 45.0% | |
| TGTCAAGGATACTCCTGATC+CGG | + | chr1_2:44305348-44305367 | Msa0071910:intron | 45.0% | |
| ATCCTCAACCCGGACAATAT+CGG | + | chr1_2:44305388-44305407 | Msa0071910:intron | 45.0% | |
| TTATGTGGCCGATATTGTCC+GGG | - | chr1_2:44305399-44305418 | Msa0071920:CDS | 45.0% | |
| TATCGGCCACATAAATGAGG+AGG | + | chr1_2:44305405-44305424 | Msa0071910:intron | 45.0% | |
| ATCGGCCACATAAATGAGGA+GGG | + | chr1_2:44305406-44305425 | Msa0071910:intron | 45.0% | |
| AAGCAACTTGCAAACCTGTG+AGG | + | chr1_2:44305565-44305584 | Msa0071910:intron | 45.0% | |
| AGCAACTTGCAAACCTGTGA+GGG | + | chr1_2:44305566-44305585 | Msa0071910:intron | 45.0% | |
| GGGGAAGAGTTCATGAAACT+TGG | + | chr1_2:44305586-44305605 | Msa0071910:intron | 45.0% | |
| AGTTCATGAAACTTGGGGCA+TGG | + | chr1_2:44305593-44305612 | Msa0071910:intron | 45.0% | |
| CCTTCGCTATCATTAAAGGG+TGG | - | chr1_2:44305686-44305705 | Msa0071920:intron | 45.0% | |
| ! | CCACCCTTTAATGATAGCGA+AGG | + | chr1_2:44305683-44305702 | Msa0071910:intron | 45.0% |
| CTTGTTGGCGTCACTTCTAT+CGG | - | chr1_2:44305816-44305835 | Msa0071920:CDS | 45.0% | |
| CCTCTAACTACTTAGAAGCC+AGG | - | chr1_2:44305920-44305939 | Msa0071920:CDS | 45.0% | |
| CCTGGCTTCTAAGTAGTTAG+AGG | + | chr1_2:44305917-44305936 | Msa0071910:intron | 45.0% | |
| GGAATGAGTGCAATTAGAGG+TGG | + | chr1_2:44306019-44306038 | Msa0071910:intron | 45.0% | |
| ATGAGTGCAATTAGAGGTGG+AGG | + | chr1_2:44306022-44306041 | Msa0071910:intron | 45.0% | |
| ATGTAATCCTGAAGGTGAGG+TGG | + | chr1_2:44306056-44306075 | Msa0071910:intron | 45.0% | |
| ! | AAGGTGAGGTGGTGGTTTAT+CGG | + | chr1_2:44306067-44306086 | Msa0071910:intron | 45.0% |
| GTATTCGGAAATTCAAGGCC+AGG | + | chr1_2:44306110-44306129 | Msa0071910:intron | 45.0% | |
| ACATGGACAGGATACAGTAG+TGG | + | chr1_2:44306134-44306153 | Msa0071910:intron | 45.0% | |
| ! | ACAGGATACAGTAGTGGAGT+GGG | + | chr1_2:44306140-44306159 | Msa0071910:intron | 45.0% |
| GGTGGGAGAAGAATTGATGT+TGG | + | chr1_2:44306201-44306220 | Msa0071910:intron | 45.0% | |
| TGGATGAGAGTTCCCAACAT+TGG | + | chr1_2:44306221-44306240 | Msa0071910:intron | 45.0% | |
| ! | ACGGGGAAGGATCTTTTGAA+TGG | + | chr1_2:44306253-44306272 | Msa0071910:intron | 45.0% |
| ! | CGGGGAAGGATCTTTTGAAT+GGG | + | chr1_2:44306254-44306273 | Msa0071910:intron | 45.0% |
| AATTACGGGTGATAGGGTGT+TGG | - | chr1_2:44306828-44306847 | None:intergenic | 45.0% | |
| GGATCACTTTCTCCATAACC+AGG | - | chr1_2:44306985-44307004 | None:intergenic | 45.0% | |
| CTATGTCATTGGTACTTCCC+TGG | + | chr1_2:44307083-44307102 | Msa0071910:intron | 45.0% | |
| ACCTGTGAGGTATGTGCTTA+AGG | - | chr1_2:44307131-44307150 | None:intergenic | 45.0% | |
| TTCCACCAGTATGTTAGCCA+TGG | - | chr1_2:44307564-44307583 | None:intergenic | 45.0% | |
| ACTGGTGGAACACTCAAAGA+TGG | + | chr1_2:44307574-44307593 | Msa0071910:CDS | 45.0% | |
| TTCACTGCTTAGGACCTGTT+TGG | + | chr1_2:44307976-44307995 | Msa0071910:intron | 45.0% | |
| CTAGATGGAGGTTTCCCTTA+TGG | + | chr1_2:44308495-44308514 | Msa0071910:intron | 45.0% | |
| AAGACATCCCTTTACCCGAA+TGG | + | chr1_2:44308620-44308639 | Msa0071910:intron | 45.0% | |
| GTTTCCAACCATTCGGGTAA+AGG | - | chr1_2:44308631-44308650 | None:intergenic | 45.0% | |
| !! | AGAGCAATGCTGCTTTGACT+TGG | + | chr1_2:44308675-44308694 | Msa0071910:intron | 45.0% |
| !! | CTGCTTTGACTTGGTTAGCT+CGG | + | chr1_2:44308684-44308703 | Msa0071910:intron | 45.0% |
| AAACTTCAGGCAGCTATCCA+TGG | - | chr1_2:44308769-44308788 | None:intergenic | 45.0% | |
| ! | CCTTGTTGTCTTACCTGCTT+TGG | - | chr1_2:44309084-44309103 | None:intergenic | 45.0% |
| CCAAAGCAGGTAAGACAACA+AGG | + | chr1_2:44309081-44309100 | Msa0071910:intron | 45.0% | |
| CAATATTCAAGTCACGGTGG+AGG | - | chr1_2:44309119-44309138 | None:intergenic | 45.0% | |
| CTCCACCGTGACTTGAATAT+TGG | + | chr1_2:44309117-44309136 | Msa0071910:CDS | 45.0% | |
| GGTTCTGTTCATCTTTGGCA+AGG | + | chr1_2:44309198-44309217 | Msa0071910:CDS | 45.0% | |
| ! | AGTTCATGGTAGTGAACCCA+CGG | - | chr1_2:44309279-44309298 | None:intergenic | 45.0% |
| GTTCACTACCATGAACTTCC+AGG | + | chr1_2:44309282-44309301 | Msa0071910:CDS | 45.0% | |
| TACCATGAACTTCCAGGTTC+TGG | + | chr1_2:44309288-44309307 | Msa0071910:CDS | 45.0% | |
| TTGTTAGGTAGCCTAGTGGC+AGG | - | chr1_2:44303919-44303938 | None:intergenic | 50.0% | |
| AAAGACAGATCGGGGTGATC+TGG | + | chr1_2:44303958-44303977 | Msa0071910:five_prime_UTR | 50.0% | |
| TCTCTCACAACAATGGCCAC+TGG | + | chr1_2:44304099-44304118 | Msa0071910:exon | 50.0% | |
| AGCTCGTTCTCACACCAGAA+GGG | + | chr1_2:44304149-44304168 | Msa0071910:CDS | 50.0% | |
| !! | AGAGGATTTGTTGGCCCTTC+TGG | - | chr1_2:44304166-44304185 | None:intergenic | 50.0% |
| AGAGCAAAGACCCAACCTGA+AGG | - | chr1_2:44304201-44304220 | None:intergenic | 50.0% | |
| CGAGTAACTGGCTGAAGCTA+TGG | + | chr1_2:44304788-44304807 | Msa0071910:intron | 50.0% | |
| AACTGGCTGAAGCTATGGCA+CGG | + | chr1_2:44304793-44304812 | Msa0071910:intron | 50.0% | |
| GTCGGAACAACCAGCTCAAT+CGG | + | chr1_2:44304923-44304942 | Msa0071910:intron | 50.0% | |
| !! | GACACACACTAGCCTTGGAT+TGG | + | chr1_2:44305044-44305063 | Msa0071910:intron | 50.0% |
| !! | TTGAAACCGGTTTGCTGCCA+AGG | + | chr1_2:44305196-44305215 | Msa0071910:intron | 50.0% |
| GTCAAGGATACTCCTGATCC+GGG | + | chr1_2:44305349-44305368 | Msa0071910:intron | 50.0% | |
| ATCATCTTTCCGAGCTCTCC+CGG | - | chr1_2:44305370-44305389 | Msa0071920:CDS | 50.0% | |
| CGGAAAGATGATCCTCAACC+CGG | + | chr1_2:44305378-44305397 | Msa0071910:intron | 50.0% | |
| !! | TGATGTTGGTGAGCATCGAG+TGG | + | chr1_2:44305447-44305466 | Msa0071910:intron | 50.0% |
| GCAACTTGCAAACCTGTGAG+GGG | + | chr1_2:44305567-44305586 | Msa0071910:intron | 50.0% | |
| TCATGAACTCTTCCCCTCAC+AGG | - | chr1_2:44305582-44305601 | Msa0071920:intron | 50.0% | |
| CTCTTAGCCTCAACCCAACA+CGG | + | chr1_2:44305888-44305907 | Msa0071910:intron | 50.0% | |
| TCTTAGCCTCAACCCAACAC+GGG | + | chr1_2:44305889-44305908 | Msa0071910:intron | 50.0% | |
| AGGATTCAGGGATAGCATCG+AGG | + | chr1_2:44305937-44305956 | Msa0071910:intron | 50.0% | |
| ! | GGATTCAGGGATAGCATCGA+GGG | + | chr1_2:44305938-44305957 | Msa0071910:intron | 50.0% |
| ! | AGGGATAGCATCGAGGGAAA+GGG | + | chr1_2:44305944-44305963 | Msa0071910:intron | 50.0% |
| ! | GGGAAAGGGCATATTCCTTG+TGG | + | chr1_2:44305958-44305977 | Msa0071910:intron | 50.0% |
| GGCATATTCCTTGTGGCTAG+AGG | + | chr1_2:44305965-44305984 | Msa0071910:intron | 50.0% | |
| TAATCCTGAAGGTGAGGTGG+TGG | + | chr1_2:44306059-44306078 | Msa0071910:intron | 50.0% | |
| TAAACCACCACCTCACCTTC+AGG | - | chr1_2:44306066-44306085 | Msa0071920:CDS | 50.0% | |
| GAAATTCAAGGCCAGGGACA+TGG | + | chr1_2:44306117-44306136 | Msa0071910:intron | 50.0% | |
| ! | GACAGGATACAGTAGTGGAG+TGG | + | chr1_2:44306139-44306158 | Msa0071910:intron | 50.0% |
| TAGTGGAGTGGGAGAAGAAC+TGG | + | chr1_2:44306151-44306170 | Msa0071910:intron | 50.0% | |
| AGTGGAGTGGGAGAAGAACT+GGG | + | chr1_2:44306152-44306171 | Msa0071910:intron | 50.0% | |
| GAAGAACTGGGAACAGGTTC+AGG | + | chr1_2:44306164-44306183 | Msa0071910:intron | 50.0% | |
| GTTCAGGTGGCTGGAAAGAA+GGG | + | chr1_2:44306180-44306199 | Msa0071910:intron | 50.0% | |
| !! | GAGTTCCCAACATTGGCTCT+CGG | + | chr1_2:44306228-44306247 | Msa0071910:intron | 50.0% |
| ACCTCATACTAAGGCCGACA+GGG | - | chr1_2:44306422-44306441 | None:intergenic | 50.0% | |
| AACCTCATACTAAGGCCGAC+AGG | - | chr1_2:44306423-44306442 | None:intergenic | 50.0% | |
| GCTCCTCCTCCCAAAATATG+TGG | + | chr1_2:44306647-44306666 | Msa0071910:CDS | 50.0% | |
| !! | GAGCCACATATTTTGGGAGG+AGG | - | chr1_2:44306653-44306672 | None:intergenic | 50.0% |
| !! | GGAGAGCCACATATTTTGGG+AGG | - | chr1_2:44306656-44306675 | None:intergenic | 50.0% |
| TCCATGGTTTCAGCAGTTGC+AGG | + | chr1_2:44306786-44306805 | Msa0071910:CDS | 50.0% | |
| GCTTGTGCAGGATGTTGTCA+AGG | + | chr1_2:44306927-44306946 | Msa0071910:intron | 50.0% | |
| TCATTGGTACTTCCCTGGGT+GGG | + | chr1_2:44307088-44307107 | Msa0071910:intron | 50.0% | |
| CCATACAATTTGCCCACCCA+GGG | - | chr1_2:44307103-44307122 | None:intergenic | 50.0% | |
| TCCATACAATTTGCCCACCC+AGG | - | chr1_2:44307104-44307123 | None:intergenic | 50.0% | |
| GCCTTAAGCACATACCTCAC+AGG | + | chr1_2:44307127-44307146 | Msa0071910:intron | 50.0% | |
| TTCAATACTGACAGGCTGGC+AGG | + | chr1_2:44307414-44307433 | Msa0071910:intron | 50.0% | |
| ACACGCCATGGCTAACATAC+TGG | + | chr1_2:44307556-44307575 | Msa0071910:CDS | 50.0% | |
| CATCCCTTTACCCGAATGGT+TGG | + | chr1_2:44308624-44308643 | Msa0071910:intron | 50.0% | |
| CTGGAGGTTTCCAACCATTC+GGG | - | chr1_2:44308637-44308656 | None:intergenic | 50.0% | |
| GCTGGAGGTTTCCAACCATT+CGG | - | chr1_2:44308638-44308657 | None:intergenic | 50.0% | |
| ! | CAATTTTCCCTCCGCATCCA+TGG | + | chr1_2:44308749-44308768 | Msa0071910:intron | 50.0% |
| ! | GTATTGATCACCGGCTATCC+AGG | + | chr1_2:44309384-44309403 | Msa0071910:three_prime_UTR | 50.0% |
| ! | TATCCTCACCTTTTCCCGTG+AGG | + | chr1_2:44309627-44309646 | Msa0071910:three_prime_UTR | 50.0% |
| CAGCTCGTTCTCACACCAGA+AGG | + | chr1_2:44304148-44304167 | Msa0071910:CDS | 55.0% | |
| GCTTGTCCTTGGCAGCAAAC+CGG | - | chr1_2:44305205-44305224 | Msa0071920:intron | 55.0% | |
| ! | CAGGGATAGCATCGAGGGAA+AGG | + | chr1_2:44305943-44305962 | Msa0071910:intron | 55.0% |
| CTGTATCCTGTCCATGTCCC+TGG | - | chr1_2:44306131-44306150 | Msa0071920:CDS | 55.0% | |
| GTGGGAGAAGAACTGGGAAC+AGG | + | chr1_2:44306158-44306177 | Msa0071910:intron | 55.0% | |
| GAACTGGGAACAGGTTCAGG+TGG | + | chr1_2:44306167-44306186 | Msa0071910:intron | 55.0% | |
| GGTTCAGGTGGCTGGAAAGA+AGG | + | chr1_2:44306179-44306198 | Msa0071910:intron | 55.0% | |
| AGGTGGCTGGAAAGAAGGGT+GGG | + | chr1_2:44306184-44306203 | Msa0071910:intron | 55.0% | |
| CGTCACCGAGAGCCAATGTT+GGG | - | chr1_2:44306236-44306255 | None:intergenic | 55.0% | |
| !! | CCAACATTGGCTCTCGGTGA+CGG | + | chr1_2:44306234-44306253 | Msa0071910:intron | 55.0% |
| !! | CAACATTGGCTCTCGGTGAC+GGG | + | chr1_2:44306235-44306254 | Msa0071910:intron | 55.0% |
| !! | AACATTGGCTCTCGGTGACG+GGG | + | chr1_2:44306236-44306255 | Msa0071910:intron | 55.0% |
| TCCCTGTCGGCCTTAGTATG+AGG | + | chr1_2:44306418-44306437 | Msa0071910:intron | 55.0% | |
| GCCTGCAACTGCTGAAACCA+TGG | - | chr1_2:44306790-44306809 | None:intergenic | 55.0% | |
| GTCATTGGTACTTCCCTGGG+TGG | + | chr1_2:44307087-44307106 | Msa0071910:intron | 55.0% | |
| CCCTGGGTGGGCAAATTGTA+TGG | + | chr1_2:44307100-44307119 | Msa0071910:intron | 55.0% | |
| CCACCAGAAGTTGACGACTG+GGG | - | chr1_2:44307454-44307473 | None:intergenic | 55.0% | |
| GCCACCAGAAGTTGACGACT+GGG | - | chr1_2:44307455-44307474 | None:intergenic | 55.0% | |
| GCTTCGGCCGTTAAGTTTGC+AGG | - | chr1_2:44307486-44307505 | None:intergenic | 55.0% | |
| ! | GTGTTGCTCACTACACGCCA+TGG | + | chr1_2:44307544-44307563 | Msa0071910:CDS | 55.0% |
| CGCCATGGCTAACATACTGG+TGG | + | chr1_2:44307559-44307578 | Msa0071910:CDS | 55.0% | |
| CAGCTATCCATGGATGCGGA+GGG | - | chr1_2:44308759-44308778 | None:intergenic | 55.0% | |
| CAGGCAGCTATCCATGGATG+CGG | - | chr1_2:44308763-44308782 | None:intergenic | 55.0% | |
| ACATCGCGCAAAACCTTCCG+TGG | + | chr1_2:44309259-44309278 | Msa0071910:CDS | 55.0% | |
| CATCGCGCAAAACCTTCCGT+GGG | + | chr1_2:44309260-44309279 | Msa0071910:CDS | 55.0% | |
| ! | CATGGTAGTGAACCCACGGA+AGG | - | chr1_2:44309275-44309294 | None:intergenic | 55.0% |
| GGCCAGAACCTGGAAGTTCA+TGG | - | chr1_2:44309293-44309312 | None:intergenic | 55.0% | |
| CATCAGCATGAGGGAAGAGG+TGG | - | chr1_2:44309314-44309333 | None:intergenic | 55.0% | |
| CACCTCTTCCCTCATGCTGA+TGG | + | chr1_2:44309312-44309331 | Msa0071910:CDS | 55.0% | |
| CACCATCAGCATGAGGGAAG+AGG | - | chr1_2:44309317-44309336 | None:intergenic | 55.0% | |
| CGCTCACACCATCAGCATGA+GGG | - | chr1_2:44309323-44309342 | None:intergenic | 55.0% | |
| TCGCTCACACCATCAGCATG+AGG | - | chr1_2:44309324-44309343 | None:intergenic | 55.0% | |
| ! | CCAAAGCTAGCCTGGATAGC+CGG | - | chr1_2:44309397-44309416 | None:intergenic | 55.0% |
| CATCCTCACGGGAAAAGGTG+AGG | - | chr1_2:44309633-44309652 | None:intergenic | 55.0% | |
| !! | GGAAGCATCCTCACGGGAAA+AGG | - | chr1_2:44309638-44309657 | None:intergenic | 55.0% |
| GAAGGGCCCCATCATCATCG+TGG | + | chr1_2:44305145-44305164 | Msa0071910:intron | 60.0% | |
| ACTCCTGATCCGGGAGAGCT+CGG | + | chr1_2:44305358-44305377 | Msa0071910:intron | 60.0% | |
| TTTCCGAGCTCTCCCGGATC+AGG | - | chr1_2:44305364-44305383 | Msa0071920:CDS | 60.0% | |
| GGCCGATATTGTCCGGGTTG+AGG | - | chr1_2:44305393-44305412 | Msa0071920:CDS | 60.0% | |
| ! | GAAGCACCCGTGTTGGGTTG+AGG | - | chr1_2:44305898-44305917 | Msa0071920:CDS | 60.0% |
| AACCCAACACGGGTGCTTCC+TGG | + | chr1_2:44305899-44305918 | Msa0071910:intron | 60.0% | |
| !! | AGCCAGGAAGCACCCGTGTT+GGG | - | chr1_2:44305904-44305923 | Msa0071920:CDS | 60.0% |
| !! | AAGCCAGGAAGCACCCGTGT+TGG | - | chr1_2:44305905-44305924 | Msa0071920:CDS | 60.0% |
| TCAAGGCCAGGGACATGGAC+AGG | + | chr1_2:44306122-44306141 | Msa0071910:intron | 60.0% | |
| TGGGAACAGGTTCAGGTGGC+TGG | + | chr1_2:44306171-44306190 | Msa0071910:intron | 60.0% | |
| CAGGTGGCTGGAAAGAAGGG+TGG | + | chr1_2:44306183-44306202 | Msa0071910:intron | 60.0% | |
| CCGTCACCGAGAGCCAATGT+TGG | - | chr1_2:44306237-44306256 | None:intergenic | 60.0% | |
| GCTGTTATAGGCGGCCCATC+AGG | - | chr1_2:44306677-44306696 | None:intergenic | 60.0% | |
| CAGTTGCAGGCATGACGCTG+TGG | + | chr1_2:44306799-44306818 | Msa0071910:CDS | 60.0% | |
| TGGCCCCAGTCGTCAACTTC+TGG | + | chr1_2:44307448-44307467 | Msa0071910:CDS | 60.0% | |
| CCCCAGTCGTCAACTTCTGG+TGG | + | chr1_2:44307451-44307470 | Msa0071910:CDS | 60.0% | |
| GGCCACCAGAAGTTGACGAC+TGG | - | chr1_2:44307456-44307475 | None:intergenic | 60.0% | |
| CGGCCGAAGCCTATTCCCAA+TGG | + | chr1_2:44307496-44307515 | Msa0071910:CDS | 60.0% | |
| ! | GAGCAACACGAAGCGCCCAT+TGG | - | chr1_2:44307533-44307552 | None:intergenic | 60.0% |
| GCAGCTATCCATGGATGCGG+AGG | - | chr1_2:44308760-44308779 | None:intergenic | 60.0% | |
| !! | CCGGCTATCCAGGCTAGCTT+TGG | + | chr1_2:44309394-44309413 | Msa0071910:three_prime_UTR | 60.0% |
| !! | TTGGCTCTCGGTGACGGGGA+AGG | + | chr1_2:44306240-44306259 | Msa0071910:intron | 65.0% |
| GGGAAGAGGTGGCCAGAACC+TGG | - | chr1_2:44309303-44309322 | None:intergenic | 65.0% | |
| GCTGGCAGGTGCAGCGCTCT+TGG | + | chr1_2:44307428-44307447 | Msa0071910:CDS | 70.0% |
| Chromosome | Type | Strat | End | Strand | Name |
|---|---|---|---|---|---|
| chr1_2 | gene | 44303905 | 44309660 | 44303905 | ID=Msa0071910;Name=Msa0071910 |
| chr1_2 | mRNA | 44303905 | 44309660 | 44303905 | ID=Msa0071910-mRNA-1;Parent=Msa0071910;Name=Msa0071910-mRNA-1;_AED=0.29;_eAED=0.29;_QI=206|0.75|0.8|1|0.5|0.8|5|283|349 |
| chr1_2 | exon | 44303905 | 44304204 | 44303905 | ID=Msa0071910-mRNA-1:exon:13369;Parent=Msa0071910-mRNA-1 |
| chr1_2 | exon | 44306579 | 44306841 | 44306579 | ID=Msa0071910-mRNA-1:exon:13370;Parent=Msa0071910-mRNA-1 |
| chr1_2 | exon | 44306937 | 44307073 | 44306937 | ID=Msa0071910-mRNA-1:exon:13371;Parent=Msa0071910-mRNA-1 |
| chr1_2 | exon | 44307428 | 44307695 | 44307428 | ID=Msa0071910-mRNA-1:exon:13372;Parent=Msa0071910-mRNA-1 |
| chr1_2 | exon | 44309090 | 44309660 | 44309090 | ID=Msa0071910-mRNA-1:exon:13373;Parent=Msa0071910-mRNA-1 |
| chr1_2 | five_prime_UTR | 44303905 | 44304110 | 44303905 | ID=Msa0071910-mRNA-1:five_prime_utr;Parent=Msa0071910-mRNA-1 |
| chr1_2 | CDS | 44304111 | 44304204 | 44304111 | ID=Msa0071910-mRNA-1:cds;Parent=Msa0071910-mRNA-1 |
| chr1_2 | CDS | 44306579 | 44306841 | 44306579 | ID=Msa0071910-mRNA-1:cds;Parent=Msa0071910-mRNA-1 |
| chr1_2 | CDS | 44306937 | 44307073 | 44306937 | ID=Msa0071910-mRNA-1:cds;Parent=Msa0071910-mRNA-1 |
| chr1_2 | CDS | 44307428 | 44307695 | 44307428 | ID=Msa0071910-mRNA-1:cds;Parent=Msa0071910-mRNA-1 |
| chr1_2 | CDS | 44309090 | 44309377 | 44309090 | ID=Msa0071910-mRNA-1:cds;Parent=Msa0071910-mRNA-1 |
| chr1_2 | three_prime_UTR | 44309378 | 44309660 | 44309378 | ID=Msa0071910-mRNA-1:three_prime_utr;Parent=Msa0071910-mRNA-1 |
| Gene Sequence |
| Protein sequence |
