Alfalfa Gene Editing Database
Alfalfa Gene Editing Database
| Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa0309080 | XP_003592937.2 | 96.617 | 473 | 11 | 2 | 1 | 473 | 1 | 468 | 0.0 | 937 |
| Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa0309080 | sp|Q94CC0|Y5994_ARATH | 57.987 | 457 | 174 | 6 | 33 | 472 | 24 | 479 | 2.10e-176 | 506 |
| Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa0309080 | G7INA2 | 96.617 | 473 | 11 | 2 | 1 | 473 | 1 | 468 | 0.0 | 937 |
| Gene ID | Type | Classification |
|---|
| Gene ID | Type | Classification |
|---|
Co-expression Network
| Gene1 | Gene2 | correlation coefficient | p_value | FDR |
|---|---|---|---|---|
| Msa0000550 | Msa0309080 | 0.811663 | 6.254369e-51 | -8.615850e-47 |
| Msa0006700 | Msa0309080 | -0.802786 | 4.756422e-49 | -8.615850e-47 |
| Msa0020630 | Msa0309080 | -0.803066 | 4.161827e-49 | -8.615850e-47 |
| Msa0038350 | Msa0309080 | 0.808821 | 2.565656e-50 | -8.615850e-47 |
| Msa0039420 | Msa0309080 | 0.823268 | 1.517787e-53 | -8.615850e-47 |
| Msa0071910 | Msa0309080 | 0.811899 | 5.558103e-51 | -8.615850e-47 |
| Msa0077390 | Msa0309080 | -0.834702 | 2.572302e-56 | -8.615850e-47 |
| Msa0088550 | Msa0309080 | -0.801301 | 9.604214e-49 | -8.615850e-47 |
| Msa0091770 | Msa0309080 | -0.805266 | 1.450135e-49 | -8.615850e-47 |
| Msa0094100 | Msa0309080 | -0.835749 | 1.399734e-56 | -8.615850e-47 |
| Msa0101810 | Msa0309080 | 0.806011 | 1.011896e-49 | -8.615850e-47 |
| Msa0105340 | Msa0309080 | -0.808574 | 2.896984e-50 | -8.615850e-47 |
| Msa0106120 | Msa0309080 | 0.816764 | 4.672965e-52 | -8.615850e-47 |
| Msa0106370 | Msa0309080 | 0.800476 | 1.416028e-48 | -8.615850e-47 |
| Msa0179860 | Msa0309080 | -0.805776 | 1.133727e-49 | -8.615850e-47 |
| Msa0185640 | Msa0309080 | 0.866719 | 2.320821e-65 | -8.615850e-47 |
| Msa0215320 | Msa0309080 | 0.814316 | 1.639536e-51 | -8.615850e-47 |
| Msa0217400 | Msa0309080 | -0.801789 | 7.626991e-49 | -8.615850e-47 |
| Msa0223410 | Msa0309080 | 0.804812 | 1.804972e-49 | -8.615850e-47 |
| Msa0226250 | Msa0309080 | -0.823836 | 1.117449e-53 | -8.615850e-47 |
| Msa0235550 | Msa0309080 | -0.809272 | 2.053384e-50 | -8.615850e-47 |
| Msa0256500 | Msa0309080 | 0.832073 | 1.163955e-55 | -8.615850e-47 |
| Msa0257250 | Msa0309080 | -0.801744 | 7.790827e-49 | -8.615850e-47 |
| Msa0258670 | Msa0309080 | 0.818556 | 1.842729e-52 | -8.615850e-47 |
| Msa0265820 | Msa0309080 | -0.846161 | 2.583537e-59 | -8.615850e-47 |
| Msa0269360 | Msa0309080 | -0.804079 | 2.566506e-49 | -8.615850e-47 |
| Msa0270440 | Msa0309080 | 0.986738 | 8.414831e-168 | -8.615850e-47 |
| Msa0274520 | Msa0309080 | -0.817058 | 4.014449e-52 | -8.615850e-47 |
| Msa0280660 | Msa0309080 | 0.806142 | 9.496704e-50 | -8.615850e-47 |
| Msa0282590 | Msa0309080 | -0.805460 | 1.320525e-49 | -8.615850e-47 |
| Msa0288330 | Msa0309080 | -0.818913 | 1.529486e-52 | -8.615850e-47 |
| Msa0295640 | Msa0309080 | 0.833363 | 5.569217e-56 | -8.615850e-47 |
| Msa0296560 | Msa0309080 | -0.812090 | 5.050052e-51 | -8.615850e-47 |
| Msa0304740 | Msa0309080 | -0.806025 | 1.004950e-49 | -8.615850e-47 |
| Msa0307830 | Msa0309080 | 0.801788 | 7.632556e-49 | -8.615850e-47 |
| Msa0309080 | Msa0312690 | 0.809642 | 1.710690e-50 | -8.615850e-47 |
| Msa0309080 | Msa0326670 | -0.806444 | 8.201353e-50 | -8.615850e-47 |
| Msa0309080 | Msa0327860 | -0.825357 | 4.898574e-54 | -8.615850e-47 |
| Msa0309080 | Msa0331590 | -0.809282 | 2.043910e-50 | -8.615850e-47 |
| Msa0309080 | Msa0331920 | -0.805926 | 1.054412e-49 | -8.615850e-47 |
| Msa0309080 | Msa0342200 | -0.823109 | 1.652921e-53 | -8.615850e-47 |
| Msa0309080 | Msa0342340 | 0.867772 | 1.069451e-65 | -8.615850e-47 |
| Msa0309080 | Msa0354800 | 0.817194 | 3.742805e-52 | -8.615850e-47 |
| Msa0309080 | Msa0362740 | -0.829037 | 6.439246e-55 | -8.615850e-47 |
| Msa0309080 | Msa0371420 | 0.813948 | 1.976500e-51 | -8.615850e-47 |
| Msa0309080 | Msa0371570 | -0.807745 | 4.349991e-50 | -8.615850e-47 |
| Msa0309080 | Msa0375060 | 0.807481 | 4.950339e-50 | -8.615850e-47 |
| Msa0309080 | Msa0381620 | 0.809372 | 1.954525e-50 | -8.615850e-47 |
| Msa0309080 | Msa0414070 | -0.817493 | 3.204433e-52 | -8.615850e-47 |
| Msa0309080 | Msa0419990 | -0.830816 | 2.372740e-55 | -8.615850e-47 |
| Msa0309080 | Msa0437710 | -0.842751 | 2.136199e-58 | -8.615850e-47 |
| Msa0309080 | Msa0442850 | -0.816728 | 4.762123e-52 | -8.615850e-47 |
| Msa0309080 | Msa0448550 | 0.816182 | 6.308488e-52 | -8.615850e-47 |
| Msa0309080 | Msa0449590 | 0.812755 | 3.613497e-51 | -8.615850e-47 |
| Msa0309080 | Msa0449760 | -0.806419 | 8.302274e-50 | -8.615850e-47 |
| Msa0309080 | Msa0459770 | 0.818842 | 1.586979e-52 | -8.615850e-47 |
| Msa0309080 | Msa0465680 | 0.850879 | 1.276219e-60 | -8.615850e-47 |
| Msa0309080 | Msa0465930 | -0.800659 | 1.299022e-48 | -8.615850e-47 |
| Msa0309080 | Msa0465970 | -0.822651 | 2.113498e-53 | -8.615850e-47 |
| Msa0309080 | Msa0480320 | -0.840030 | 1.111079e-57 | -8.615850e-47 |
| Msa0309080 | Msa0490350 | -0.811238 | 7.738052e-51 | -8.615850e-47 |
| Msa0309080 | Msa0505660 | -0.802599 | 5.197140e-49 | -8.615850e-47 |
| Msa0309080 | Msa0509970 | -0.840188 | 1.010571e-57 | -8.615850e-47 |
| Msa0309080 | Msa0516450 | -0.810962 | 8.881435e-51 | -8.615850e-47 |
| Msa0309080 | Msa0524890 | 0.884360 | 2.048838e-71 | -8.615850e-47 |
| Msa0309080 | Msa0528970 | -0.859223 | 4.799436e-63 | -8.615850e-47 |
| Msa0309080 | Msa0531970 | 0.809434 | 1.895827e-50 | -8.615850e-47 |
| Msa0309080 | Msa0531990 | 0.834773 | 2.468795e-56 | -8.615850e-47 |
| Msa0309080 | Msa0532100 | 0.837078 | 6.426428e-57 | -8.615850e-47 |
| Msa0309080 | Msa0538700 | -0.813189 | 2.903767e-51 | -8.615850e-47 |
| Msa0309080 | Msa0540070 | -0.823903 | 1.078139e-53 | -8.615850e-47 |
| Msa0309080 | Msa0543900 | -0.812465 | 4.182019e-51 | -8.615850e-47 |
| Msa0309080 | Msa0548280 | 0.821166 | 4.665254e-53 | -8.615850e-47 |
| Msa0309080 | Msa0557680 | -0.801288 | 9.663917e-49 | -8.615850e-47 |
| Msa0309080 | Msa0562650 | -0.823062 | 1.695361e-53 | -8.615850e-47 |
| Msa0309080 | Msa0563140 | -0.832731 | 7.996975e-56 | -8.615850e-47 |
| Msa0309080 | Msa0564510 | -0.823062 | 1.695256e-53 | -8.615850e-47 |
| Msa0309080 | Msa0576990 | 0.834689 | 2.592473e-56 | -8.615850e-47 |
| Msa0309080 | Msa0581760 | -0.802198 | 6.287249e-49 | -8.615850e-47 |
| Msa0309080 | Msa0585000 | 0.801943 | 7.093398e-49 | -8.615850e-47 |
| Msa0309080 | Msa0599770 | -0.809988 | 1.441125e-50 | -8.615850e-47 |
| Msa0309080 | Msa0599890 | -0.812681 | 3.752093e-51 | -8.615850e-47 |
| Msa0309080 | Msa0607540 | -0.802096 | 6.597253e-49 | -8.615850e-47 |
| Msa0309080 | Msa0616560 | 0.848043 | 7.881573e-60 | -8.615850e-47 |
| Msa0309080 | Msa0617370 | -0.811232 | 7.761484e-51 | -8.615850e-47 |
| Msa0309080 | Msa0621590 | -0.800867 | 1.178077e-48 | -8.615850e-47 |
| Msa0309080 | Msa0621890 | -0.822371 | 2.455653e-53 | -8.615850e-47 |
| Msa0309080 | Msa0640380 | -0.801545 | 8.559976e-49 | -8.615850e-47 |
| Msa0309080 | Msa0641450 | -0.816493 | 5.374259e-52 | -8.615850e-47 |
| Msa0309080 | Msa0647450 | 0.819969 | 8.782258e-53 | -8.615850e-47 |
| Msa0309080 | Msa0655660 | 0.803489 | 3.401423e-49 | -8.615850e-47 |
| Msa0309080 | Msa0655990 | 0.850646 | 1.484215e-60 | -8.615850e-47 |
| Msa0309080 | Msa0657670 | -0.809695 | 1.666490e-50 | -8.615850e-47 |
| Msa0309080 | Msa0660880 | 0.835661 | 1.473586e-56 | -8.615850e-47 |
| Msa0309080 | Msa0669990 | -0.800070 | 1.712413e-48 | -8.615850e-47 |
| Msa0309080 | Msa0677820 | -0.817890 | 2.608066e-52 | -8.615850e-47 |
| Msa0309080 | Msa0678820 | -0.806398 | 8.387363e-50 | -8.615850e-47 |
| Msa0309080 | Msa0679990 | -0.801055 | 1.078591e-48 | -8.615850e-47 |
| Msa0309080 | Msa0688550 | -0.831956 | 1.244161e-55 | -8.615850e-47 |
| Msa0309080 | Msa0697140 | -0.830105 | 3.541051e-55 | -8.615850e-47 |
| Msa0309080 | Msa0697200 | -0.810153 | 1.327781e-50 | -8.615850e-47 |
| Msa0309080 | Msa0699920 | 0.858491 | 7.942667e-63 | -8.615850e-47 |
| Msa0309080 | Msa0701840 | 0.857528 | 1.535429e-62 | -8.615850e-47 |
| Msa0309080 | Msa0714600 | -0.810057 | 1.392772e-50 | -8.615850e-47 |
| Msa0309080 | Msa0715720 | -0.832757 | 7.877795e-56 | -8.615850e-47 |
| Msa0309080 | Msa0716450 | -0.807073 | 6.040893e-50 | -8.615850e-47 |
| Msa0309080 | Msa0716740 | 0.840609 | 7.841908e-58 | -8.615850e-47 |
| Msa0309080 | Msa0718240 | -0.814052 | 1.874609e-51 | -8.615850e-47 |
| Msa0309080 | Msa0719490 | 0.856605 | 2.874425e-62 | -8.615850e-47 |
| Msa0309080 | Msa0722930 | -0.817530 | 3.144111e-52 | -8.615850e-47 |
| Msa0309080 | Msa0723140 | -0.806651 | 7.418245e-50 | -8.615850e-47 |
| Msa0309080 | Msa0731710 | -0.800649 | 1.305088e-48 | -8.615850e-47 |
| Msa0309080 | Msa0752580 | -0.810627 | 1.049018e-50 | -8.615850e-47 |
| Msa0309080 | Msa0770430 | -0.800066 | 1.715950e-48 | -8.615850e-47 |
| Msa0309080 | Msa0773610 | -0.814201 | 1.737756e-51 | -8.615850e-47 |
| Msa0309080 | Msa0799290 | 0.838130 | 3.453226e-57 | -8.615850e-47 |
| Msa0309080 | Msa0801100 | -0.801363 | 9.327877e-49 | -8.615850e-47 |
| Msa0309080 | Msa0802470 | 0.823046 | 1.709781e-53 | -8.615850e-47 |
| Msa0309080 | Msa0830900 | -0.806280 | 8.882262e-50 | -8.615850e-47 |
| Msa0309080 | Msa0835920 | -0.805373 | 1.377740e-49 | -8.615850e-47 |
| Msa0309080 | Msa0837510 | 0.838463 | 2.832782e-57 | -8.615850e-47 |
| Msa0309080 | Msa0839330 | -0.817821 | 2.702798e-52 | -8.615850e-47 |
| Msa0309080 | Msa0843280 | -0.802328 | 5.910605e-49 | -8.615850e-47 |
| Msa0309080 | Msa0844900 | -0.802255 | 6.117413e-49 | -8.615850e-47 |
| Msa0309080 | Msa0847200 | -0.813517 | 2.459209e-51 | -8.615850e-47 |
| Msa0309080 | Msa0848380 | -0.801140 | 1.035961e-48 | -8.615850e-47 |
| Msa0309080 | Msa0859430 | 0.838166 | 3.379262e-57 | -8.615850e-47 |
| Msa0309080 | Msa0876850 | 0.821253 | 4.454933e-53 | -8.615850e-47 |
| Msa0309080 | Msa0890250 | -0.811398 | 7.141113e-51 | -8.615850e-47 |
| Msa0309080 | Msa0891040 | -0.808846 | 2.533988e-50 | -8.615850e-47 |
| Msa0309080 | Msa0900200 | -0.818100 | 2.337954e-52 | -8.615850e-47 |
| Msa0309080 | Msa0909710 | -0.813291 | 2.757607e-51 | -8.615850e-47 |
| Msa0309080 | Msa0919520 | -0.803593 | 3.237275e-49 | -8.615850e-47 |
| Msa0309080 | Msa0930460 | 0.800134 | 1.661685e-48 | -8.615850e-47 |
| Msa0309080 | Msa0937940 | -0.807322 | 5.349276e-50 | -8.615850e-47 |
| Msa0309080 | Msa0946120 | -0.805534 | 1.274584e-49 | -8.615850e-47 |
| Msa0309080 | Msa0951720 | -0.846689 | 1.855434e-59 | -8.615850e-47 |
| Msa0309080 | Msa0961420 | 0.858888 | 6.046122e-63 | -8.615850e-47 |
| Msa0309080 | Msa0965520 | -0.832041 | 1.184999e-55 | -8.615850e-47 |
| Msa0309080 | Msa0968320 | 0.814461 | 1.523005e-51 | -8.615850e-47 |
| Msa0309080 | Msa0980440 | -0.831721 | 1.421677e-55 | -8.615850e-47 |
| Msa0309080 | Msa0988500 | -0.828428 | 9.042309e-55 | -8.615850e-47 |
| Msa0309080 | Msa0990960 | -0.816871 | 4.423089e-52 | -8.615850e-47 |
| Msa0309080 | Msa0999960 | 0.818786 | 1.634723e-52 | -8.615850e-47 |
| Msa0309080 | Msa1000020 | -0.810905 | 9.134903e-51 | -8.615850e-47 |
| Msa0309080 | Msa1007610 | 0.801413 | 9.112449e-49 | -8.615850e-47 |
| Msa0309080 | Msa1008340 | -0.818882 | 1.553996e-52 | -8.615850e-47 |
| Msa0309080 | Msa1008490 | -0.821186 | 4.615627e-53 | -8.615850e-47 |
| Msa0309080 | Msa1009000 | -0.802995 | 4.304479e-49 | -8.615850e-47 |
| Msa0309080 | Msa1019840 | 0.827671 | 1.375415e-54 | -8.615850e-47 |
| Msa0309080 | Msa1026760 | -0.804704 | 1.901468e-49 | -8.615850e-47 |
| Msa0309080 | Msa1026790 | -0.801431 | 9.031606e-49 | -8.615850e-47 |
| Msa0309080 | Msa1036390 | -0.838225 | 3.263622e-57 | -8.615850e-47 |
| Msa0309080 | Msa1037700 | 0.800649 | 1.305090e-48 | -8.615850e-47 |
| Msa0309080 | Msa1042710 | -0.810975 | 8.823655e-51 | -8.615850e-47 |
| Msa0309080 | Msa1049950 | -0.816101 | 6.578386e-52 | -8.615850e-47 |
| Msa0309080 | Msa1072350 | -0.800360 | 1.494779e-48 | -8.615850e-47 |
| Msa0309080 | Msa1075220 | 0.823930 | 1.062129e-53 | -8.615850e-47 |
| Msa0309080 | Msa1076680 | -0.836378 | 9.694071e-57 | -8.615850e-47 |
| Msa0309080 | Msa1077390 | -0.804454 | 2.143192e-49 | -8.615850e-47 |
| Msa0309080 | Msa1081600 | -0.804158 | 2.470319e-49 | -8.615850e-47 |
| Msa0309080 | Msa1083410 | -0.820940 | 5.257715e-53 | -8.615850e-47 |
| Msa0309080 | Msa1085960 | 0.822997 | 1.755471e-53 | -8.615850e-47 |
| Msa0309080 | Msa1087530 | -0.807643 | 4.572982e-50 | -8.615850e-47 |
| Msa0309080 | Msa1098560 | -0.827876 | 1.227847e-54 | -8.615850e-47 |
| Msa0309080 | Msa1116130 | 0.803792 | 2.944050e-49 | -8.615850e-47 |
| Msa0309080 | Msa1130270 | 0.811508 | 6.758629e-51 | -8.615850e-47 |
| Msa0309080 | Msa1131940 | 0.824210 | 9.131662e-54 | -8.615850e-47 |
| Msa0309080 | Msa1139240 | -0.837305 | 5.621833e-57 | -8.615850e-47 |
| Msa0309080 | Msa1162550 | 0.814901 | 1.216404e-51 | -8.615850e-47 |
| Msa0309080 | Msa1166370 | -0.814987 | 1.164315e-51 | -8.615850e-47 |
| Msa0309080 | Msa1168680 | 0.815443 | 9.221100e-52 | -8.615850e-47 |
| Msa0309080 | Msa1168730 | 0.818214 | 2.203255e-52 | -8.615850e-47 |
| Msa0309080 | Msa1184730 | -0.847756 | 9.456207e-60 | -8.615850e-47 |
| Msa0309080 | Msa1188420 | -0.824056 | 9.927261e-54 | -8.615850e-47 |
| Msa0309080 | Msa1204980 | 0.869926 | 2.146866e-66 | -8.615850e-47 |
| Msa0309080 | Msa1205010 | 0.874197 | 8.153733e-68 | -8.615850e-47 |
| Msa0309080 | Msa1205130 | -0.837910 | 3.932813e-57 | -8.615850e-47 |
| Msa0309080 | Msa1207480 | 0.823423 | 1.396330e-53 | -8.615850e-47 |
| Msa0309080 | Msa1213440 | 0.861597 | 9.174223e-64 | -8.615850e-47 |
| Msa0309080 | Msa1221200 | 0.815095 | 1.101643e-51 | -8.615850e-47 |
| Msa0309080 | Msa1222970 | -0.805001 | 1.647831e-49 | -8.615850e-47 |
| Msa0309080 | Msa1228210 | -0.819384 | 1.194964e-52 | -8.615850e-47 |
| Msa0309080 | Msa1233500 | -0.805050 | 1.609504e-49 | -8.615850e-47 |
| Msa0309080 | Msa1246740 | -0.800066 | 1.715243e-48 | -8.615850e-47 |
| Msa0309080 | Msa1252070 | -0.805790 | 1.125809e-49 | -8.615850e-47 |
| Msa0309080 | Msa1252390 | -0.810569 | 1.080027e-50 | -8.615850e-47 |
| Msa0309080 | Msa1254950 | -0.823261 | 1.523818e-53 | -8.615850e-47 |
| Msa0309080 | Msa1256540 | 0.867408 | 1.398964e-65 | -8.615850e-47 |
| Msa0309080 | Msa1257870 | 0.809879 | 1.521444e-50 | -8.615850e-47 |
| Msa0309080 | Msa1260490 | 0.858846 | 6.221671e-63 | -8.615850e-47 |
| Msa0309080 | Msa1265960 | -0.805045 | 1.613680e-49 | -8.615850e-47 |
| Msa0309080 | Msa1271280 | -0.806193 | 9.264364e-50 | -8.615850e-47 |
| Msa0309080 | Msa1271300 | -0.803823 | 2.900729e-49 | -8.615850e-47 |
| Msa0309080 | Msa1279860 | -0.800467 | 1.421660e-48 | -8.615850e-47 |
| Msa0309080 | Msa1280130 | -0.815159 | 1.066332e-51 | -8.615850e-47 |
| Msa0309080 | Msa1287560 | -0.812193 | 4.795929e-51 | -8.615850e-47 |
| Msa0309080 | Msa1289830 | 0.862375 | 5.297512e-64 | -8.615850e-47 |
| Msa0309080 | Msa1295690 | -0.817900 | 2.594668e-52 | -8.615850e-47 |
| Msa0309080 | Msa1296960 | 0.869171 | 3.779998e-66 | -8.615850e-47 |
| Msa0309080 | Msa1300350 | 0.814332 | 1.625933e-51 | -8.615850e-47 |
| Msa0309080 | Msa1316560 | 0.830177 | 3.400540e-55 | -8.615850e-47 |
| Msa0309080 | Msa1327320 | -0.801488 | 8.792978e-49 | -8.615850e-47 |
| Msa0309080 | Msa1329990 | -0.812237 | 4.690143e-51 | -8.615850e-47 |
| Msa0309080 | Msa1331690 | 0.860560 | 1.896407e-63 | -8.615850e-47 |
| Msa0309080 | Msa1342430 | -0.804915 | 1.717962e-49 | -8.615850e-47 |
| Msa0309080 | Msa1347290 | -0.815184 | 1.053030e-51 | -8.615850e-47 |
| Msa0309080 | Msa1358870 | 0.811818 | 5.787316e-51 | -8.615850e-47 |
| Msa0309080 | Msa1367080 | -0.800923 | 1.147355e-48 | -8.615850e-47 |
| Msa0309080 | Msa1369530 | -0.803225 | 3.859093e-49 | -8.615850e-47 |
| Msa0309080 | Msa1371080 | 0.804843 | 1.777840e-49 | -8.615850e-47 |
| Msa0309080 | Msa1385620 | -0.821396 | 4.129650e-53 | -8.615850e-47 |
| Msa0309080 | Msa1386520 | -0.804000 | 2.664478e-49 | -8.615850e-47 |
| Msa0309080 | Msa1395230 | 0.801725 | 7.863124e-49 | -8.615850e-47 |
| Msa0309080 | Msa1418200 | -0.804979 | 1.665185e-49 | -8.615850e-47 |
| Msa0309080 | Msa1427760 | -0.803510 | 3.368860e-49 | -8.615850e-47 |
| Msa0309080 | Msa1431000 | -0.802091 | 6.611563e-49 | -8.615850e-47 |
| Msa0309080 | Msa1438270 | -0.835601 | 1.526428e-56 | -8.615850e-47 |
| Msa0309080 | Msa1451620 | 0.824403 | 8.227205e-54 | -8.615850e-47 |
| Msa0309080 | Msa1454290 | 0.811180 | 7.965492e-51 | -8.615850e-47 |
| Msa0309080 | Msa1454910 | 0.824409 | 8.200837e-54 | -8.615850e-47 |
| Msa0309080 | Msa1461250 | 0.830619 | 2.651389e-55 | -8.615850e-47 |
| Msa0309080 | Msa1464560 | -0.807326 | 5.339467e-50 | -8.615850e-47 |
| Msa0309080 | Msa1464940 | -0.805873 | 1.081687e-49 | -8.615850e-47 |
PPI
| Gene1 | Gene2 | Type |
|---|
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa0309080 | MtrunA17_Chr2g0277181 | 96.617 | 473 | 11 | 2 | 1 | 473 | 1 | 468 | 0.0 | 937 |
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa0309080 | AT4G24330.1 | 59.081 | 479 | 181 | 6 | 5 | 472 | 3 | 477 | 0.0 | 578 |
| Msa0309080 | AT5G49945.1 | 57.987 | 457 | 174 | 6 | 33 | 472 | 24 | 479 | 2.13e-177 | 506 |
Find 147 sgRNAs with CRISPR-Local
Find 258 sgRNAs with CRISPR-GE
CRISPR-Local
| sgRNA_sequence | on_target_score | Position | Region |
|---|---|---|---|
| CAACCACCACCTTCGATTTC+TGG | 0.098592 | 2_4:+3516734 | Msa0309080:CDS |
| TGCATAATTATCTTGGATTT+TGG | 0.153202 | 2_4:+3516400 | Msa0309080:five_prime_UTR |
| TGTTTCTAAGATCCAAATTT+TGG | 0.178354 | 2_4:-3519202 | None:intergenic |
| TATTGCTAGGATTTATAATA+TGG | 0.212888 | 2_4:+3517176 | Msa0309080:CDS |
| AAGCTATGCATAAGGATTAT+AGG | 0.261825 | 2_4:+3517295 | Msa0309080:CDS |
| CAATTACTTCACTGGTAAAA+AGG | 0.264314 | 2_4:+3516939 | Msa0309080:CDS |
| AAGGAGAAGGAGTAGGATTA+GGG | 0.264529 | 2_4:-3516675 | None:intergenic |
| GTTGGTGTTATCGGTGGATT+TGG | 0.274086 | 2_4:-3516824 | None:intergenic |
| CATAAAACTTAAACGTTGTT+TGG | 0.275872 | 2_4:-3517089 | None:intergenic |
| GGTTGAAGGAGGAGTGGATT+TGG | 0.276521 | 2_4:-3516716 | None:intergenic |
| GTTGAAGGAGGAGTGGATTT+GGG | 0.298422 | 2_4:-3516715 | None:intergenic |
| TATTATTCACAGTAGCTTAC+TGG | 0.298937 | 2_4:+3519404 | Msa0309080:three_prime_UTR |
| TCAAGGGTTGTTGGCAACTA+TGG | 0.308146 | 2_4:+3517131 | Msa0309080:CDS |
| GAAGGAGAAGGAGTAGGATT+AGG | 0.308252 | 2_4:-3516676 | None:intergenic |
| GTACCTCTTGGGCAACCTTT+TGG | 0.310100 | 2_4:-3518829 | None:intergenic |
| TTCTTTGCATGGCCTCTTGT+TGG | 0.314550 | 2_4:-3518871 | None:intergenic |
| CCGTATTATATTGACTTGAT+TGG | 0.319009 | 2_4:+3518648 | Msa0309080:CDS |
| CTTGCAGATCATCAAGAATT+AGG | 0.324483 | 2_4:-3519029 | None:intergenic |
| AACCACCACCTTCGATTTCT+GGG | 0.331040 | 2_4:+3516735 | Msa0309080:CDS |
| TCGTGCTCGCCAAATGAAAA+AGG | 0.334109 | 2_4:+3518976 | Msa0309080:CDS |
| AAAATTTAAGGAAATTCATT+AGG | 0.336515 | 2_4:-3519333 | None:intergenic |
| AGATAGACGCGACCACATTT+TGG | 0.338830 | 2_4:+3519164 | Msa0309080:three_prime_UTR |
| CTCTGCCTTTCTTCTTTGCA+TGG | 0.349420 | 2_4:-3518882 | None:intergenic |
| AGCTATGCATAAGGATTATA+GGG | 0.351733 | 2_4:+3517296 | Msa0309080:CDS |
| GTGGTTGGAACTTGGAAATC+AGG | 0.359744 | 2_4:-3516796 | None:intergenic |
| TTAGGGTTTGGATTGGGATT+GGG | 0.360603 | 2_4:-3516658 | None:intergenic |
| ACAAGAAAGTATTGCTGTTC+AGG | 0.365938 | 2_4:+3518568 | Msa0309080:CDS |
| GAATTCACCGTCATCGTCTT+CGG | 0.369999 | 2_4:-3516572 | None:intergenic |
| GAAGGAGTAGGATTAGGGTT+TGG | 0.371519 | 2_4:-3516670 | None:intergenic |
| GAAGTTCTTTCTGTACCTCT+TGG | 0.375756 | 2_4:-3518841 | None:intergenic |
| AGCGGTGGTGTTGGTGTTAT+CGG | 0.389309 | 2_4:-3516833 | None:intergenic |
| GGATGTAGATTAAAGTTATC+AGG | 0.391350 | 2_4:-3519235 | None:intergenic |
| ACTACAACGTTCGTTGGGTG+GGG | 0.394036 | 2_4:-3519073 | None:intergenic |
| GGGTTGTTGCATAATTATCT+TGG | 0.400169 | 2_4:+3516393 | Msa0309080:five_prime_UTR |
| ACGAGAACATAGCACTTTCA+TGG | 0.405682 | 2_4:+3516965 | Msa0309080:CDS |
| GGAGGTGATCGGAGAGAAGC+TGG | 0.418900 | 2_4:-3516613 | None:intergenic |
| AACTACAACGTTCGTTGGGT+GGG | 0.428555 | 2_4:-3519074 | None:intergenic |
| GTAGGATTAGGGTTTGGATT+GGG | 0.429352 | 2_4:-3516664 | None:intergenic |
| AAGTTCTTTCTGTACCTCTT+GGG | 0.429385 | 2_4:-3518840 | None:intergenic |
| TTGGTGTTATCGGTGGATTT+GGG | 0.431462 | 2_4:-3516823 | None:intergenic |
| GTTTGGATTGGGATTGGGAT+CGG | 0.432518 | 2_4:-3516653 | None:intergenic |
| AATACTTTCTTGTGTATGCC+AGG | 0.432533 | 2_4:-3518558 | None:intergenic |
| TGGGATCGGTGGTTGGAACT+TGG | 0.435416 | 2_4:-3516804 | None:intergenic |
| TTCACCGTTGAGATCCTTTG+CGG | 0.441976 | 2_4:+3516892 | Msa0309080:CDS |
| GGAAGATCGGAGGGTGGAGA+AGG | 0.446062 | 2_4:-3516694 | None:intergenic |
| ATTAGGGTTTGGATTGGGAT+TGG | 0.446204 | 2_4:-3516659 | None:intergenic |
| GTGCAGCCTCTGTCTTAGAC+CGG | 0.451076 | 2_4:-3518805 | None:intergenic |
| TTATGACTCCTCCTACTTCA+AGG | 0.451253 | 2_4:+3517340 | Msa0309080:CDS |
| TGCTGTTATTTCTGAGTCTA+GGG | 0.451354 | 2_4:+3517383 | Msa0309080:CDS |
| ACTCCTTTGTTGTTGAAAGA+AGG | 0.457036 | 2_4:+3517066 | Msa0309080:CDS |
| AAATCGAAGGTGGTGGTTGA+AGG | 0.457098 | 2_4:-3516730 | None:intergenic |
| TTGCTGTTATTTCTGAGTCT+AGG | 0.458238 | 2_4:+3517382 | Msa0309080:CDS |
| AAGATATAAATTGAGTTCTC+AGG | 0.467578 | 2_4:+3518671 | Msa0309080:CDS |
| AAGATACTGTCAAGGGTTGT+TGG | 0.469800 | 2_4:+3517122 | Msa0309080:CDS |
| CATTGCCATGATTCTACAAA+AGG | 0.470317 | 2_4:-3519106 | None:intergenic |
| CACCCAACGAACGTTGTAGT+TGG | 0.474539 | 2_4:+3519076 | Msa0309080:three_prime_UTR |
| AGGAGTGGATTTGGGAAGAT+CGG | 0.475376 | 2_4:-3516707 | None:intergenic |
| CCAATCAAGTCAATATAATA+CGG | 0.475546 | 2_4:-3518648 | None:intergenic |
| TTCGCTCTCAATTACTTCAC+TGG | 0.478131 | 2_4:+3516931 | Msa0309080:CDS |
| TGGATTTGCCATTGGAAATG+AGG | 0.478220 | 2_4:-3516449 | None:intergenic |
| GTGGATTTGGGATCGGTGGT+TGG | 0.478643 | 2_4:-3516811 | None:intergenic |
| AGCTGCTAAAGCTATGCATA+AGG | 0.479460 | 2_4:+3517287 | Msa0309080:CDS |
| GACAGAGGCTGCACGCCAAA+AGG | 0.482052 | 2_4:+3518814 | Msa0309080:CDS |
| CTCCTCCTACTTCAAGGAAG+TGG | 0.487356 | 2_4:+3517346 | Msa0309080:CDS |
| ACCCAACGAACGTTGTAGTT+GGG | 0.490138 | 2_4:+3519077 | Msa0309080:three_prime_UTR |
| GGTGGAGAAGGAGAAGGAGT+AGG | 0.499503 | 2_4:-3516682 | None:intergenic |
| CTACAACGTTCGTTGGGTGG+GGG | 0.500888 | 2_4:-3519072 | None:intergenic |
| AAAGATGATGGAGGAGGCTG+AGG | 0.501171 | 2_4:+3518910 | Msa0309080:CDS |
| ACCCAACTACAACGTTCGTT+GGG | 0.501431 | 2_4:-3519078 | None:intergenic |
| GAAACCTTCGAAATGAGAAT+CGG | 0.505706 | 2_4:-3516545 | None:intergenic |
| GAAATTGAGAAGGAGGTGAT+CGG | 0.506052 | 2_4:-3516624 | None:intergenic |
| ACAACGTTCGTTGGGTGGGG+GGG | 0.515904 | 2_4:-3519070 | None:intergenic |
| AGTAGGATTAGGGTTTGGAT+TGG | 0.517738 | 2_4:-3516665 | None:intergenic |
| AGAGGCCATGCAAAGAAGAA+AGG | 0.521432 | 2_4:+3518877 | Msa0309080:CDS |
| TACAACGTTCGTTGGGTGGG+GGG | 0.523253 | 2_4:-3519071 | None:intergenic |
| TTTAGGGATCGGCGATGGCG+GGG | 0.524169 | 2_4:+3517038 | Msa0309080:CDS |
| GACCCAACTACAACGTTCGT+TGG | 0.524838 | 2_4:-3519079 | None:intergenic |
| TGGATTGGGATTGGGATCGG+TGG | 0.525036 | 2_4:-3516650 | None:intergenic |
| ATAACTTTAATCTACATCCT+CGG | 0.525760 | 2_4:+3519239 | Msa0309080:three_prime_UTR |
| TCGGAGGGTGGAGAAGGAGA+AGG | 0.528190 | 2_4:-3516688 | None:intergenic |
| TCGCGTCTATCTAGCTAACA+TGG | 0.533156 | 2_4:-3519153 | None:intergenic |
| TGAGGCAAAGCTTGGTGCAG+AGG | 0.534453 | 2_4:+3518928 | Msa0309080:CDS |
| TGCAGCCTCTGTCTTAGACC+GGG | 0.536900 | 2_4:-3518804 | None:intergenic |
| CAATCCGATTCTCATTTCGA+AGG | 0.539734 | 2_4:+3516541 | Msa0309080:CDS |
| AGTGGATTTGGGAAGATCGG+AGG | 0.539885 | 2_4:-3516704 | None:intergenic |
| ATCGGTGGATTTGGGATCGG+TGG | 0.540015 | 2_4:-3516815 | None:intergenic |
| GAGGAGGCTGAGGCAAAGCT+TGG | 0.543326 | 2_4:+3518920 | Msa0309080:CDS |
| TCCTCCTACTTCAAGGAAGT+GGG | 0.544170 | 2_4:+3517347 | Msa0309080:CDS |
| GTGGAGAGAAATTGAGAAGG+AGG | 0.545006 | 2_4:-3516631 | None:intergenic |
| GTGGATTTGGGAAGATCGGA+GGG | 0.545353 | 2_4:-3516703 | None:intergenic |
| GTAGACATGATCTTATTGCT+AGG | 0.545819 | 2_4:+3517163 | Msa0309080:CDS |
| CGAGAACATAGCACTTTCAT+GGG | 0.547466 | 2_4:+3516966 | Msa0309080:CDS |
| CACTGATGCACTCATTGACC+AGG | 0.547628 | 2_4:+3517425 | Msa0309080:CDS |
| TCGAAGGTGGTGGTTGAAGG+AGG | 0.549474 | 2_4:-3516727 | None:intergenic |
| CAACTACAACGTTCGTTGGG+TGG | 0.552077 | 2_4:-3519075 | None:intergenic |
| GTTATCGGTGGATTTGGGAT+CGG | 0.553039 | 2_4:-3516818 | None:intergenic |
| TTATATGAATGATGATGCTA+TGG | 0.558977 | 2_4:+3517233 | Msa0309080:CDS |
| TCGGAGAGAAGCTGGATCGA+TGG | 0.559887 | 2_4:-3516605 | None:intergenic |
| GAAATCAGGGTGTGGTTGAG+TGG | 0.563043 | 2_4:-3516782 | None:intergenic |
| ATTATCAGAAGCGGTGGTGT+TGG | 0.566463 | 2_4:-3516842 | None:intergenic |
| GGAACTTGGAAATCAGGGTG+TGG | 0.567818 | 2_4:-3516790 | None:intergenic |
| AAATCAGGGTGTGGTTGAGT+GGG | 0.568472 | 2_4:-3516781 | None:intergenic |
| GATTTGGGAAGATCGGAGGG+TGG | 0.569460 | 2_4:-3516700 | None:intergenic |
| CATCAAGAATTAGGCACCAC+GGG | 0.574200 | 2_4:-3519020 | None:intergenic |
| TGGCCTTCTTTCAACAACAA+AGG | 0.578438 | 2_4:-3517069 | None:intergenic |
| GGTGGTGGTTGAAGGAGGAG+TGG | 0.581447 | 2_4:-3516722 | None:intergenic |
| ACTTACAACCTCATTTCCAA+TGG | 0.585043 | 2_4:+3516441 | Msa0309080:exon |
| CATTTCTCCGACAATCACCC+TGG | 0.586446 | 2_4:+3518540 | Msa0309080:CDS |
| GAAACCCACTTCCTTGAAGT+AGG | 0.587052 | 2_4:-3517351 | None:intergenic |
| GTGTATGCCAGGGTGATTGT+CGG | 0.587355 | 2_4:-3518547 | None:intergenic |
| TCGGTGGAGAGAAATTGAGA+AGG | 0.588755 | 2_4:-3516634 | None:intergenic |
| TGGTTGGAACTTGGAAATCA+GGG | 0.589428 | 2_4:-3516795 | None:intergenic |
| GCCTAGCAAGCTCTGACATG+TGG | 0.591862 | 2_4:+3519371 | Msa0309080:three_prime_UTR |
| AGAGAAGCTGGATCGATGGA+AGG | 0.595249 | 2_4:-3516601 | None:intergenic |
| ACGGTGAAGGAACGTGGTTG+AGG | 0.599647 | 2_4:-3516877 | None:intergenic |
| ATACTTTCTTGTGTATGCCA+GGG | 0.600972 | 2_4:-3518557 | None:intergenic |
| CATGGCTGATATGACTCGAC+TGG | 0.602151 | 2_4:+3518614 | Msa0309080:CDS |
| GTCCCAGAAATCGAAGGTGG+TGG | 0.605691 | 2_4:-3516737 | None:intergenic |
| CCAGGCCCGGTCTAAGACAG+AGG | 0.610101 | 2_4:+3518799 | Msa0309080:intron |
| GCAAAGGATCTCAACGGTGA+AGG | 0.611372 | 2_4:-3516890 | None:intergenic |
| ACCACATGTCAGAGCTTGCT+AGG | 0.612179 | 2_4:-3519372 | None:intergenic |
| CGCGTCTATCTAGCTAACAT+GGG | 0.615479 | 2_4:-3519152 | None:intergenic |
| ACTTCGAAATATCCAACAAG+AGG | 0.620842 | 2_4:+3518859 | Msa0309080:CDS |
| ATCTCAACGGTGAAGGAACG+TGG | 0.621931 | 2_4:-3516883 | None:intergenic |
| ACCCACTTCCTTGAAGTAGG+AGG | 0.624318 | 2_4:-3517348 | None:intergenic |
| AGTGGAAGAAGATACTGTCA+AGG | 0.628369 | 2_4:+3517114 | Msa0309080:CDS |
| CCATGATTCTACAAAAGGCA+AGG | 0.629272 | 2_4:-3519101 | None:intergenic |
| ATACAAAATCCACCAAAATG+TGG | 0.630867 | 2_4:-3519176 | None:intergenic |
| GGCTGATATGACTCGACTGG+TGG | 0.633292 | 2_4:+3518617 | Msa0309080:CDS |
| ACGCCAAAAGGTTGCCCAAG+AGG | 0.633928 | 2_4:+3518826 | Msa0309080:CDS |
| ATGAGAATCGGATTGAACAA+AGG | 0.638117 | 2_4:-3516533 | None:intergenic |
| TTCGAAGCCGAAGACGATGA+CGG | 0.646446 | 2_4:+3516565 | Msa0309080:CDS |
| TGATAAGAAAACTACCGCAA+AGG | 0.646488 | 2_4:-3516906 | None:intergenic |
| TGGGACGACGATGAATTCGA+AGG | 0.647371 | 2_4:+3516754 | Msa0309080:CDS |
| TGCAAAGAAGAAAGGCAGAG+AGG | 0.649908 | 2_4:+3518885 | Msa0309080:CDS |
| AGGATTATAGGGATTTGCAG+AGG | 0.654212 | 2_4:+3517307 | Msa0309080:CDS |
| GTCTATCTAGCTAACATGGG+AGG | 0.661496 | 2_4:-3519149 | None:intergenic |
| ATCGTCGTCCCAGAAATCGA+AGG | 0.666868 | 2_4:-3516743 | None:intergenic |
| GGTGGTGTTGGTGTTATCGG+TGG | 0.674832 | 2_4:-3516830 | None:intergenic |
| TAACAATCAACTAGAAACCG+AGG | 0.675288 | 2_4:-3519256 | None:intergenic |
| TGCATAGTGAAAGTGAAGCG+AGG | 0.681519 | 2_4:-3516501 | None:intergenic |
| GTGGAAGAAGATACTGTCAA+GGG | 0.686143 | 2_4:+3517115 | Msa0309080:CDS |
| TCATCAAGAATTAGGCACCA+CGG | 0.686490 | 2_4:-3519021 | None:intergenic |
| GTCGTCCCAGAAATCGAAGG+TGG | 0.691523 | 2_4:-3516740 | None:intergenic |
| ACTACCGCAAAGGATCTCAA+CGG | 0.704572 | 2_4:-3516896 | None:intergenic |
| TAGACTCAGAAATAACAGCA+AGG | 0.709973 | 2_4:-3517380 | None:intergenic |
| CCAAGAATGAAAATGTCCCG+TGG | 0.746726 | 2_4:+3519004 | Msa0309080:CDS |
CRISPR-GE
| badsite warning | sgRNA_sequence | Strand | Position | Region | GC_content |
|---|---|---|---|---|---|
| !!! | AATTTTCATGTTTTAATCAT+TGG | + | chr2_4:3517481-3517500 | Msa0309080:intron | 15.0% |
| !! | AAAATTTAAGGAAATTCATT+AGG | - | chr2_4:3519336-3519355 | None:intergenic | 15.0% |
| !!! | AAGAAAAAGAAAAAGAGTTT+TGG | - | chr2_4:3516472-3516491 | None:intergenic | 20.0% |
| !!! | AGAAAAATTTCAGTCTTTTA+GGG | + | chr2_4:3517022-3517041 | Msa0309080:CDS | 20.0% |
| !! | TATTGCTAGGATTTATAATA+TGG | + | chr2_4:3517176-3517195 | Msa0309080:CDS | 20.0% |
| !! | AATATTCCTCTTAAAATCAT+TGG | - | chr2_4:3517721-3517740 | None:intergenic | 20.0% |
| !!! | TGATTTTAAGAGGAATATTA+TGG | + | chr2_4:3517722-3517741 | Msa0309080:intron | 20.0% |
| !! | AATATAAGCAAAGTATACAT+TGG | - | chr2_4:3518722-3518741 | None:intergenic | 20.0% |
| !!! | ATTTTGTATGTACCAAAATT+TGG | + | chr2_4:3519190-3519209 | Msa0309080:three_prime_UTR | 20.0% |
| !! | ATAGCAAGTGAAAAAATTTA+AGG | - | chr2_4:3519348-3519367 | None:intergenic | 20.0% |
| !!! | AAATTTTTTCACTTGCTATT+TGG | + | chr2_4:3519349-3519368 | Msa0309080:three_prime_UTR | 20.0% |
| !!! | TTTTGATTTAAGTTTGGAGT+GGG | + | chr2_4:3516373-3516392 | Msa0309080:five_prime_UTR | 25.0% |
| !! | TGCATAATTATCTTGGATTT+TGG | + | chr2_4:3516400-3516419 | Msa0309080:five_prime_UTR | 25.0% |
| !! | GAGAAAAATTTCAGTCTTTT+AGG | + | chr2_4:3517021-3517040 | Msa0309080:CDS | 25.0% |
| ! | CATAAAACTTAAACGTTGTT+TGG | - | chr2_4:3517092-3517111 | None:intergenic | 25.0% |
| !! | AAAGTAATCTCATCTTTTGA+AGG | - | chr2_4:3517207-3517226 | None:intergenic | 25.0% |
| !!! | AAAAGATGAGATTACTTTTG+AGG | + | chr2_4:3517209-3517228 | Msa0309080:CDS | 25.0% |
| !! | TTATATGAATGATGATGCTA+TGG | + | chr2_4:3517233-3517252 | Msa0309080:CDS | 25.0% |
| ! | ATAAGAATGAAAATTGAACC+TGG | - | chr2_4:3517446-3517465 | None:intergenic | 25.0% |
| !!! | TTCATGTTTTAATCATTGGA+TGG | + | chr2_4:3517485-3517504 | Msa0309080:intron | 25.0% |
| !!! | TGAGTTTTAGAAGGTTATAT+TGG | + | chr2_4:3517578-3517597 | Msa0309080:intron | 25.0% |
| ! | GGATACATAATCATCATTAT+TGG | - | chr2_4:3517700-3517719 | None:intergenic | 25.0% |
| !! | ATGTATCCAATGATTTTAAG+AGG | + | chr2_4:3517712-3517731 | Msa0309080:intron | 25.0% |
| !! | AATAATCATGTCCAACATTT+TGG | + | chr2_4:3517749-3517768 | Msa0309080:intron | 25.0% |
| !! | ATAATCATGTCCAACATTTT+GGG | + | chr2_4:3517750-3517769 | Msa0309080:intron | 25.0% |
| ! | TCTGTGATAACTTATAGAAA+CGG | - | chr2_4:3518045-3518064 | None:intergenic | 25.0% |
| ! | AAACACAATTGTAAGTGTTT+GGG | - | chr2_4:3518120-3518139 | None:intergenic | 25.0% |
| ! | TAAACACAATTGTAAGTGTT+TGG | - | chr2_4:3518121-3518140 | None:intergenic | 25.0% |
| ! | TTATACAGAAACCACATAAA+GGG | - | chr2_4:3518182-3518201 | None:intergenic | 25.0% |
| ! | AAGGAAAAAAAAAATGAAGC+TGG | - | chr2_4:3518222-3518241 | None:intergenic | 25.0% |
| !!! | GCTTCATTTTTTTTTTCCTT+TGG | + | chr2_4:3518222-3518241 | Msa0309080:intron | 25.0% |
| !! | TGAAGTTAAAAGTTTGTTCT+TGG | + | chr2_4:3518434-3518453 | Msa0309080:intron | 25.0% |
| !!! | AGCTATTTTTTGTATACTGT+AGG | + | chr2_4:3518467-3518486 | Msa0309080:intron | 25.0% |
| !! | TTTTGTATACTGTAGGTTTT+TGG | + | chr2_4:3518474-3518493 | Msa0309080:intron | 25.0% |
| !!! | TCTTTTGAGAAATTTGGAAA+AGG | + | chr2_4:3518504-3518523 | Msa0309080:CDS | 25.0% |
| ! | CCAATCAAGTCAATATAATA+CGG | - | chr2_4:3518651-3518670 | None:intergenic | 25.0% |
| ! | AAGATATAAATTGAGTTCTC+AGG | + | chr2_4:3518671-3518690 | Msa0309080:CDS | 25.0% |
| !! | CAAAGTATACATTGGTAATA+TGG | - | chr2_4:3518714-3518733 | None:intergenic | 25.0% |
| ! | TTTATGAACATCTTTATGCT+TGG | + | chr2_4:3518744-3518763 | Msa0309080:intron | 25.0% |
| !!! | TGTTTCTAAGATCCAAATTT+TGG | - | chr2_4:3519205-3519224 | None:intergenic | 25.0% |
| ! | ATAACTTTAATCTACATCCT+CGG | + | chr2_4:3519239-3519258 | Msa0309080:three_prime_UTR | 25.0% |
| ! | AGCATGTTGACAAAAAAAAA+GGG | - | chr2_4:3519290-3519309 | None:intergenic | 25.0% |
| !!! | GTTTTGATTTAAGTTTGGAG+TGG | + | chr2_4:3516372-3516391 | Msa0309080:five_prime_UTR | 30.0% |
| !!! | AACGTTTTGATTATCAGAAG+CGG | - | chr2_4:3516854-3516873 | None:intergenic | 30.0% |
| CAATTACTTCACTGGTAAAA+AGG | + | chr2_4:3516939-3516958 | Msa0309080:CDS | 30.0% | |
| !! | AATTTCAGTCTTTTAGGGAT+CGG | + | chr2_4:3517027-3517046 | Msa0309080:CDS | 30.0% |
| !! | ACGTTTAAGTTTTATGCTAG+TGG | + | chr2_4:3517096-3517115 | Msa0309080:CDS | 30.0% |
| AAGCTATGCATAAGGATTAT+AGG | + | chr2_4:3517295-3517314 | Msa0309080:CDS | 30.0% | |
| AGCTATGCATAAGGATTATA+GGG | + | chr2_4:3517296-3517315 | Msa0309080:CDS | 30.0% | |
| !!! | AATAAGCTCTGAGTTTTAGA+AGG | + | chr2_4:3517569-3517588 | Msa0309080:intron | 30.0% |
| ! | TAATCATGTCCAACATTTTG+GGG | + | chr2_4:3517751-3517770 | Msa0309080:intron | 30.0% |
| GGATCAAATTACCTCATAAT+TGG | + | chr2_4:3517845-3517864 | Msa0309080:intron | 30.0% | |
| CTTATAGAAACGGTTTAATG+TGG | - | chr2_4:3518035-3518054 | None:intergenic | 30.0% | |
| TTCTATAAGTTATCACAGAG+AGG | + | chr2_4:3518046-3518065 | Msa0309080:intron | 30.0% | |
| TCTATAAGTTATCACAGAGA+GGG | + | chr2_4:3518047-3518066 | Msa0309080:intron | 30.0% | |
| GTTATACAGAAACCACATAA+AGG | - | chr2_4:3518183-3518202 | None:intergenic | 30.0% | |
| TCTGTATAACAGTATACCTT+TGG | + | chr2_4:3518193-3518212 | Msa0309080:intron | 30.0% | |
| ATAACAGACAAAACTACCAA+AGG | - | chr2_4:3518241-3518260 | None:intergenic | 30.0% | |
| TCATCACACAATCATATTCA+AGG | + | chr2_4:3518346-3518365 | Msa0309080:intron | 30.0% | |
| !! | GACAAGTCTTTTGAGAAATT+TGG | + | chr2_4:3518498-3518517 | Msa0309080:CDS | 30.0% |
| !! | CCGTATTATATTGACTTGAT+TGG | + | chr2_4:3518648-3518667 | Msa0309080:CDS | 30.0% |
| TTATGCACATGAGTTAATCA+AGG | - | chr2_4:3518771-3518790 | None:intergenic | 30.0% | |
| ATGTGCATAATACATAATCC+AGG | + | chr2_4:3518781-3518800 | Msa0309080:intron | 30.0% | |
| ! | TTTTGCTTCTTTCTTTCGAA+TGG | - | chr2_4:3518954-3518973 | None:intergenic | 30.0% |
| ! | ATCTGCAAGTAGAATTTTGA+AGG | + | chr2_4:3519043-3519062 | Msa0309080:three_prime_UTR | 30.0% |
| ATACAAAATCCACCAAAATG+TGG | - | chr2_4:3519179-3519198 | None:intergenic | 30.0% | |
| GGATGTAGATTAAAGTTATC+AGG | - | chr2_4:3519238-3519257 | None:intergenic | 30.0% | |
| CAGCATGTTGACAAAAAAAA+AGG | - | chr2_4:3519291-3519310 | None:intergenic | 30.0% | |
| TATTATTCACAGTAGCTTAC+TGG | + | chr2_4:3519404-3519423 | Msa0309080:three_prime_UTR | 30.0% | |
| GGGTTGTTGCATAATTATCT+TGG | + | chr2_4:3516393-3516412 | Msa0309080:five_prime_UTR | 35.0% | |
| ACTTACAACCTCATTTCCAA+TGG | + | chr2_4:3516441-3516460 | Msa0309080:exon | 35.0% | |
| !!! | AAGAGTTTTGGATTTGCCAT+TGG | - | chr2_4:3516460-3516479 | None:intergenic | 35.0% |
| ATGAGAATCGGATTGAACAA+AGG | - | chr2_4:3516536-3516555 | None:intergenic | 35.0% | |
| GAAACCTTCGAAATGAGAAT+CGG | - | chr2_4:3516548-3516567 | None:intergenic | 35.0% | |
| TGATAAGAAAACTACCGCAA+AGG | - | chr2_4:3516909-3516928 | None:intergenic | 35.0% | |
| !! | ACTCCTTTGTTGTTGAAAGA+AGG | + | chr2_4:3517066-3517085 | Msa0309080:CDS | 35.0% |
| GTAGACATGATCTTATTGCT+AGG | + | chr2_4:3517163-3517182 | Msa0309080:CDS | 35.0% | |
| !!! | GGATCATGTTGTTTTTGCTA+TGG | + | chr2_4:3517254-3517273 | Msa0309080:CDS | 35.0% |
| TAGACTCAGAAATAACAGCA+AGG | - | chr2_4:3517383-3517402 | None:intergenic | 35.0% | |
| !! | TTGCTGTTATTTCTGAGTCT+AGG | + | chr2_4:3517382-3517401 | Msa0309080:CDS | 35.0% |
| !! | TGCTGTTATTTCTGAGTCTA+GGG | + | chr2_4:3517383-3517402 | Msa0309080:CDS | 35.0% |
| TGCCAAGAGAGATGAATAAA+AGG | + | chr2_4:3517512-3517531 | Msa0309080:intron | 35.0% | |
| GCCAAGAGAGATGAATAAAA+GGG | + | chr2_4:3517513-3517532 | Msa0309080:intron | 35.0% | |
| ! | TCCCTTTTATTCATCTCTCT+TGG | - | chr2_4:3517517-3517536 | None:intergenic | 35.0% |
| AGTCGTCTTGGCTTATAATT+TGG | + | chr2_4:3517616-3517635 | Msa0309080:intron | 35.0% | |
| ! | ATGAGTTGGATCCAATTATG+AGG | - | chr2_4:3517859-3517878 | None:intergenic | 35.0% |
| TCATTAGCGCTTGAATTCTT+AGG | + | chr2_4:3517926-3517945 | Msa0309080:intron | 35.0% | |
| TATGTTCCCAATAGACTTTG+TGG | + | chr2_4:3517975-3517994 | Msa0309080:intron | 35.0% | |
| TTCTTGACATTCCCTTTATG+TGG | + | chr2_4:3518168-3518187 | Msa0309080:intron | 35.0% | |
| AAAATGAAGCTGGAAACCAA+AGG | - | chr2_4:3518212-3518231 | None:intergenic | 35.0% | |
| ATACTTTCTTGTGTATGCCA+GGG | - | chr2_4:3518560-3518579 | None:intergenic | 35.0% | |
| AATACTTTCTTGTGTATGCC+AGG | - | chr2_4:3518561-3518580 | None:intergenic | 35.0% | |
| !! | ACAAGAAAGTATTGCTGTTC+AGG | + | chr2_4:3518568-3518587 | Msa0309080:CDS | 35.0% |
| !!! | CATATCAGCCATGTTTTTAG+CGG | - | chr2_4:3518607-3518626 | None:intergenic | 35.0% |
| AGTTCTCAGGTGAGTTAAAT+TGG | + | chr2_4:3518684-3518703 | Msa0309080:intron | 35.0% | |
| AAGTTCTTTCTGTACCTCTT+GGG | - | chr2_4:3518843-3518862 | None:intergenic | 35.0% | |
| ACTTCGAAATATCCAACAAG+AGG | + | chr2_4:3518859-3518878 | Msa0309080:CDS | 35.0% | |
| !! | TTGGCATTGCCTTTTTCATT+TGG | - | chr2_4:3518988-3519007 | None:intergenic | 35.0% |
| CTTGCAGATCATCAAGAATT+AGG | - | chr2_4:3519032-3519051 | None:intergenic | 35.0% | |
| CATTGCCATGATTCTACAAA+AGG | - | chr2_4:3519109-3519128 | None:intergenic | 35.0% | |
| TAACAATCAACTAGAAACCG+AGG | - | chr2_4:3519259-3519278 | None:intergenic | 35.0% | |
| TGGATTTGCCATTGGAAATG+AGG | - | chr2_4:3516452-3516471 | None:intergenic | 40.0% | |
| CAATCCGATTCTCATTTCGA+AGG | + | chr2_4:3516541-3516560 | Msa0309080:CDS | 40.0% | |
| GAAATTGAGAAGGAGGTGAT+CGG | - | chr2_4:3516627-3516646 | None:intergenic | 40.0% | |
| ! | TTAGGGTTTGGATTGGGATT+GGG | - | chr2_4:3516661-3516680 | None:intergenic | 40.0% |
| ! | ATTAGGGTTTGGATTGGGAT+TGG | - | chr2_4:3516662-3516681 | None:intergenic | 40.0% |
| GTAGGATTAGGGTTTGGATT+GGG | - | chr2_4:3516667-3516686 | None:intergenic | 40.0% | |
| AGTAGGATTAGGGTTTGGAT+TGG | - | chr2_4:3516668-3516687 | None:intergenic | 40.0% | |
| AAGGAGAAGGAGTAGGATTA+GGG | - | chr2_4:3516678-3516697 | None:intergenic | 40.0% | |
| TGGTTGGAACTTGGAAATCA+GGG | - | chr2_4:3516798-3516817 | None:intergenic | 40.0% | |
| !! | TTGGTGTTATCGGTGGATTT+GGG | - | chr2_4:3516826-3516845 | None:intergenic | 40.0% |
| !!! | GTTTTGATTATCAGAAGCGG+TGG | - | chr2_4:3516851-3516870 | None:intergenic | 40.0% |
| TTCGCTCTCAATTACTTCAC+TGG | + | chr2_4:3516931-3516950 | Msa0309080:CDS | 40.0% | |
| ACGAGAACATAGCACTTTCA+TGG | + | chr2_4:3516965-3516984 | Msa0309080:CDS | 40.0% | |
| CGAGAACATAGCACTTTCAT+GGG | + | chr2_4:3516966-3516985 | Msa0309080:CDS | 40.0% | |
| TGGCCTTCTTTCAACAACAA+AGG | - | chr2_4:3517072-3517091 | None:intergenic | 40.0% | |
| AGTGGAAGAAGATACTGTCA+AGG | + | chr2_4:3517114-3517133 | Msa0309080:CDS | 40.0% | |
| GTGGAAGAAGATACTGTCAA+GGG | + | chr2_4:3517115-3517134 | Msa0309080:CDS | 40.0% | |
| AAGATACTGTCAAGGGTTGT+TGG | + | chr2_4:3517122-3517141 | Msa0309080:CDS | 40.0% | |
| AGCTGCTAAAGCTATGCATA+AGG | + | chr2_4:3517287-3517306 | Msa0309080:CDS | 40.0% | |
| AGGATTATAGGGATTTGCAG+AGG | + | chr2_4:3517307-3517326 | Msa0309080:CDS | 40.0% | |
| TTATGACTCCTCCTACTTCA+AGG | + | chr2_4:3517340-3517359 | Msa0309080:CDS | 40.0% | |
| CTCAGAGCTTATTCAACAGT+CGG | - | chr2_4:3517562-3517581 | None:intergenic | 40.0% | |
| TATAAGCCAAGACGACTACT+AGG | - | chr2_4:3517613-3517632 | None:intergenic | 40.0% | |
| !! | TCCAACATTTTGGGGATGTT+TGG | + | chr2_4:3517759-3517778 | Msa0309080:intron | 40.0% |
| !! | CCAACATTTTGGGGATGTTT+GGG | + | chr2_4:3517760-3517779 | Msa0309080:intron | 40.0% |
| CATCCACCACAAAGTCTATT+GGG | - | chr2_4:3517984-3518003 | None:intergenic | 40.0% | |
| GACTTGTCCATGAGTATGAT+AGG | - | chr2_4:3518075-3518094 | None:intergenic | 40.0% | |
| TTTGGGAGAATCTCGAAGTA+TGG | - | chr2_4:3518103-3518122 | None:intergenic | 40.0% | |
| ! | GTGAAGTTTGAAGTTCGTTG+TGG | + | chr2_4:3518373-3518392 | Msa0309080:intron | 40.0% |
| CATAATACATAATCCAGGCC+CGG | + | chr2_4:3518786-3518805 | Msa0309080:intron | 40.0% | |
| GAAGTTCTTTCTGTACCTCT+TGG | - | chr2_4:3518844-3518863 | None:intergenic | 40.0% | |
| ! | AGAGAGGAAAAAGATGATGG+AGG | + | chr2_4:3518901-3518920 | Msa0309080:CDS | 40.0% |
| TCATCAAGAATTAGGCACCA+CGG | - | chr2_4:3519024-3519043 | None:intergenic | 40.0% | |
| CCATGATTCTACAAAAGGCA+AGG | - | chr2_4:3519104-3519123 | None:intergenic | 40.0% | |
| ! | CCTTGCCTTTTGTAGAATCA+TGG | + | chr2_4:3519101-3519120 | Msa0309080:three_prime_UTR | 40.0% |
| TGCATAGTGAAAGTGAAGCG+AGG | - | chr2_4:3516504-3516523 | None:intergenic | 45.0% | |
| GAATTCACCGTCATCGTCTT+CGG | - | chr2_4:3516575-3516594 | None:intergenic | 45.0% | |
| GTGGAGAGAAATTGAGAAGG+AGG | - | chr2_4:3516634-3516653 | None:intergenic | 45.0% | |
| TCGGTGGAGAGAAATTGAGA+AGG | - | chr2_4:3516637-3516656 | None:intergenic | 45.0% | |
| ! | GTTTGGATTGGGATTGGGAT+CGG | - | chr2_4:3516656-3516675 | None:intergenic | 45.0% |
| GAAGGAGTAGGATTAGGGTT+TGG | - | chr2_4:3516673-3516692 | None:intergenic | 45.0% | |
| GAAGGAGAAGGAGTAGGATT+AGG | - | chr2_4:3516679-3516698 | None:intergenic | 45.0% | |
| ! | AGGAGTGGATTTGGGAAGAT+CGG | - | chr2_4:3516710-3516729 | None:intergenic | 45.0% |
| ! | GTTGAAGGAGGAGTGGATTT+GGG | - | chr2_4:3516718-3516737 | None:intergenic | 45.0% |
| ! | AAATCGAAGGTGGTGGTTGA+AGG | - | chr2_4:3516733-3516752 | None:intergenic | 45.0% |
| AACCACCACCTTCGATTTCT+GGG | + | chr2_4:3516735-3516754 | Msa0309080:CDS | 45.0% | |
| AAATCAGGGTGTGGTTGAGT+GGG | - | chr2_4:3516784-3516803 | None:intergenic | 45.0% | |
| GTGGTTGGAACTTGGAAATC+AGG | - | chr2_4:3516799-3516818 | None:intergenic | 45.0% | |
| ! | GTTATCGGTGGATTTGGGAT+CGG | - | chr2_4:3516821-3516840 | None:intergenic | 45.0% |
| !! | GTTGGTGTTATCGGTGGATT+TGG | - | chr2_4:3516827-3516846 | None:intergenic | 45.0% |
| ATTATCAGAAGCGGTGGTGT+TGG | - | chr2_4:3516845-3516864 | None:intergenic | 45.0% | |
| TTCACCGTTGAGATCCTTTG+CGG | + | chr2_4:3516892-3516911 | Msa0309080:CDS | 45.0% | |
| ACTACCGCAAAGGATCTCAA+CGG | - | chr2_4:3516899-3516918 | None:intergenic | 45.0% | |
| TCAAGGGTTGTTGGCAACTA+TGG | + | chr2_4:3517131-3517150 | Msa0309080:CDS | 45.0% | |
| TCCTCCTACTTCAAGGAAGT+GGG | + | chr2_4:3517347-3517366 | Msa0309080:CDS | 45.0% | |
| GAAACCCACTTCCTTGAAGT+AGG | - | chr2_4:3517354-3517373 | None:intergenic | 45.0% | |
| TTCCAACCTAGTAGTCGTCT+TGG | + | chr2_4:3517604-3517623 | Msa0309080:intron | 45.0% | |
| CCCAAACATCCCCAAAATGT+TGG | - | chr2_4:3517763-3517782 | None:intergenic | 45.0% | |
| !! | ACCTAGCCTTATCCACTAAG+TGG | + | chr2_4:3517810-3517829 | Msa0309080:intron | 45.0% |
| !! | CCTAGCCTTATCCACTAAGT+GGG | + | chr2_4:3517811-3517830 | Msa0309080:intron | 45.0% |
| CCTTATCCACTAAGTGGGAT+CGG | + | chr2_4:3517816-3517835 | Msa0309080:intron | 45.0% | |
| AGCGCTTAGCTGAAATGAGT+TGG | - | chr2_4:3517873-3517892 | None:intergenic | 45.0% | |
| GTTCCCAATAGACTTTGTGG+TGG | + | chr2_4:3517978-3517997 | Msa0309080:intron | 45.0% | |
| CCATCCACCACAAAGTCTAT+TGG | - | chr2_4:3517985-3518004 | None:intergenic | 45.0% | |
| ! | CCAATAGACTTTGTGGTGGA+TGG | + | chr2_4:3517982-3518001 | Msa0309080:intron | 45.0% |
| ! | TGGTGGATGGAAATCGAAGA+GGG | + | chr2_4:3517995-3518014 | Msa0309080:intron | 45.0% |
| TGGAAATCGAAGAGGGGATA+TGG | + | chr2_4:3518002-3518021 | Msa0309080:intron | 45.0% | |
| GGAAATCGAAGAGGGGATAT+GGG | + | chr2_4:3518003-3518022 | Msa0309080:intron | 45.0% | |
| GTTCGTTGTGGAAACTGTCT+TGG | + | chr2_4:3518385-3518404 | Msa0309080:intron | 45.0% | |
| TCTTCCAGCCGCTAAAAACA+TGG | + | chr2_4:3518596-3518615 | Msa0309080:CDS | 45.0% | |
| TTCTTTGCATGGCCTCTTGT+TGG | - | chr2_4:3518874-3518893 | None:intergenic | 45.0% | |
| AGAGGCCATGCAAAGAAGAA+AGG | + | chr2_4:3518877-3518896 | Msa0309080:CDS | 45.0% | |
| CTCTGCCTTTCTTCTTTGCA+TGG | - | chr2_4:3518885-3518904 | None:intergenic | 45.0% | |
| TGCAAAGAAGAAAGGCAGAG+AGG | + | chr2_4:3518885-3518904 | Msa0309080:CDS | 45.0% | |
| GGCAGAGAGGAAAAAGATGA+TGG | + | chr2_4:3518898-3518917 | Msa0309080:CDS | 45.0% | |
| !! | GAGGAAAAAGATGATGGAGG+AGG | + | chr2_4:3518904-3518923 | Msa0309080:CDS | 45.0% |
| TCGTGCTCGCCAAATGAAAA+AGG | + | chr2_4:3518976-3518995 | Msa0309080:CDS | 45.0% | |
| ! | CCACGGGACATTTTCATTCT+TGG | - | chr2_4:3519007-3519026 | None:intergenic | 45.0% |
| CCAAGAATGAAAATGTCCCG+TGG | + | chr2_4:3519004-3519023 | Msa0309080:CDS | 45.0% | |
| CATCAAGAATTAGGCACCAC+GGG | - | chr2_4:3519023-3519042 | None:intergenic | 45.0% | |
| AACTACAACGTTCGTTGGGT+GGG | - | chr2_4:3519077-3519096 | None:intergenic | 45.0% | |
| ACCCAACGAACGTTGTAGTT+GGG | + | chr2_4:3519077-3519096 | Msa0309080:three_prime_UTR | 45.0% | |
| ACCCAACTACAACGTTCGTT+GGG | - | chr2_4:3519081-3519100 | None:intergenic | 45.0% | |
| GTCTATCTAGCTAACATGGG+AGG | - | chr2_4:3519152-3519171 | None:intergenic | 45.0% | |
| CGCGTCTATCTAGCTAACAT+GGG | - | chr2_4:3519155-3519174 | None:intergenic | 45.0% | |
| TCGCGTCTATCTAGCTAACA+TGG | - | chr2_4:3519156-3519175 | None:intergenic | 45.0% | |
| ! | AGATAGACGCGACCACATTT+TGG | + | chr2_4:3519164-3519183 | Msa0309080:three_prime_UTR | 45.0% |
| TTCGAAGCCGAAGACGATGA+CGG | + | chr2_4:3516565-3516584 | Msa0309080:CDS | 50.0% | |
| AGAGAAGCTGGATCGATGGA+AGG | - | chr2_4:3516604-3516623 | None:intergenic | 50.0% | |
| GTGGATTTGGGAAGATCGGA+GGG | - | chr2_4:3516706-3516725 | None:intergenic | 50.0% | |
| ! | AGTGGATTTGGGAAGATCGG+AGG | - | chr2_4:3516707-3516726 | None:intergenic | 50.0% |
| ! | GGTTGAAGGAGGAGTGGATT+TGG | - | chr2_4:3516719-3516738 | None:intergenic | 50.0% |
| CAACCACCACCTTCGATTTC+TGG | + | chr2_4:3516734-3516753 | Msa0309080:CDS | 50.0% | |
| ATCGTCGTCCCAGAAATCGA+AGG | - | chr2_4:3516746-3516765 | None:intergenic | 50.0% | |
| TGGGACGACGATGAATTCGA+AGG | + | chr2_4:3516754-3516773 | Msa0309080:CDS | 50.0% | |
| GAAATCAGGGTGTGGTTGAG+TGG | - | chr2_4:3516785-3516804 | None:intergenic | 50.0% | |
| GGAACTTGGAAATCAGGGTG+TGG | - | chr2_4:3516793-3516812 | None:intergenic | 50.0% | |
| !! | AGCGGTGGTGTTGGTGTTAT+CGG | - | chr2_4:3516836-3516855 | None:intergenic | 50.0% |
| ATCTCAACGGTGAAGGAACG+TGG | - | chr2_4:3516886-3516905 | None:intergenic | 50.0% | |
| GCAAAGGATCTCAACGGTGA+AGG | - | chr2_4:3516893-3516912 | None:intergenic | 50.0% | |
| !! | AGTCTTTTAGGGATCGGCGA+TGG | + | chr2_4:3517033-3517052 | Msa0309080:CDS | 50.0% |
| CTCCTCCTACTTCAAGGAAG+TGG | + | chr2_4:3517346-3517365 | Msa0309080:CDS | 50.0% | |
| ACCCACTTCCTTGAAGTAGG+AGG | - | chr2_4:3517351-3517370 | None:intergenic | 50.0% | |
| CACTGATGCACTCATTGACC+AGG | + | chr2_4:3517425-3517444 | Msa0309080:CDS | 50.0% | |
| AGCCAAGACGACTACTAGGT+TGG | - | chr2_4:3517609-3517628 | None:intergenic | 50.0% | |
| ! | CCCACTTAGTGGATAAGGCT+AGG | - | chr2_4:3517814-3517833 | None:intergenic | 50.0% |
| ! | CCGATCCCACTTAGTGGATA+AGG | - | chr2_4:3517819-3517838 | None:intergenic | 50.0% |
| ATGTAGCCGATCCCACTTAG+TGG | - | chr2_4:3517825-3517844 | None:intergenic | 50.0% | |
| ACTAAGTGGGATCGGCTACA+TGG | + | chr2_4:3517824-3517843 | Msa0309080:intron | 50.0% | |
| !! | GTGGTGGATGGAAATCGAAG+AGG | + | chr2_4:3517994-3518013 | Msa0309080:intron | 50.0% |
| GGTGGATGGAAATCGAAGAG+GGG | + | chr2_4:3517996-3518015 | Msa0309080:intron | 50.0% | |
| GAGGGAGCCTATCATACTCA+TGG | + | chr2_4:3518065-3518084 | Msa0309080:intron | 50.0% | |
| CATTTCTCCGACAATCACCC+TGG | + | chr2_4:3518540-3518559 | Msa0309080:CDS | 50.0% | |
| GTGTATGCCAGGGTGATTGT+CGG | - | chr2_4:3518550-3518569 | None:intergenic | 50.0% | |
| !!! | TCAGCCATGTTTTTAGCGGC+TGG | - | chr2_4:3518603-3518622 | None:intergenic | 50.0% |
| CATGGCTGATATGACTCGAC+TGG | + | chr2_4:3518614-3518633 | Msa0309080:CDS | 50.0% | |
| ! | GTACCTCTTGGGCAACCTTT+TGG | - | chr2_4:3518832-3518851 | None:intergenic | 50.0% |
| !! | AAAGATGATGGAGGAGGCTG+AGG | + | chr2_4:3518910-3518929 | Msa0309080:CDS | 50.0% |
| ACTACAACGTTCGTTGGGTG+GGG | - | chr2_4:3519076-3519095 | None:intergenic | 50.0% | |
| CAACTACAACGTTCGTTGGG+TGG | - | chr2_4:3519078-3519097 | None:intergenic | 50.0% | |
| CACCCAACGAACGTTGTAGT+TGG | + | chr2_4:3519076-3519095 | Msa0309080:three_prime_UTR | 50.0% | |
| GACCCAACTACAACGTTCGT+TGG | - | chr2_4:3519082-3519101 | None:intergenic | 50.0% | |
| ! | TAGACGCGACCACATTTTGG+TGG | + | chr2_4:3519167-3519186 | Msa0309080:three_prime_UTR | 50.0% |
| ! | ACCACATGTCAGAGCTTGCT+AGG | - | chr2_4:3519375-3519394 | None:intergenic | 50.0% |
| TCGGAGAGAAGCTGGATCGA+TGG | - | chr2_4:3516608-3516627 | None:intergenic | 55.0% | |
| ! | TGGATTGGGATTGGGATCGG+TGG | - | chr2_4:3516653-3516672 | None:intergenic | 55.0% |
| GGTGGAGAAGGAGAAGGAGT+AGG | - | chr2_4:3516685-3516704 | None:intergenic | 55.0% | |
| GATTTGGGAAGATCGGAGGG+TGG | - | chr2_4:3516703-3516722 | None:intergenic | 55.0% | |
| ! | TCGAAGGTGGTGGTTGAAGG+AGG | - | chr2_4:3516730-3516749 | None:intergenic | 55.0% |
| GTCCCAGAAATCGAAGGTGG+TGG | - | chr2_4:3516740-3516759 | None:intergenic | 55.0% | |
| GTCGTCCCAGAAATCGAAGG+TGG | - | chr2_4:3516743-3516762 | None:intergenic | 55.0% | |
| TGGGATCGGTGGTTGGAACT+TGG | - | chr2_4:3516807-3516826 | None:intergenic | 55.0% | |
| ! | GTGGATTTGGGATCGGTGGT+TGG | - | chr2_4:3516814-3516833 | None:intergenic | 55.0% |
| ! | ATCGGTGGATTTGGGATCGG+TGG | - | chr2_4:3516818-3516837 | None:intergenic | 55.0% |
| !! | GGTGGTGTTGGTGTTATCGG+TGG | - | chr2_4:3516833-3516852 | None:intergenic | 55.0% |
| ACGGTGAAGGAACGTGGTTG+AGG | - | chr2_4:3516880-3516899 | None:intergenic | 55.0% | |
| !! | CTTTTAGGGATCGGCGATGG+CGG | + | chr2_4:3517036-3517055 | Msa0309080:CDS | 55.0% |
| !! | TTTTAGGGATCGGCGATGGC+GGG | + | chr2_4:3517037-3517056 | Msa0309080:CDS | 55.0% |
| GGCTGATATGACTCGACTGG+TGG | + | chr2_4:3518617-3518636 | Msa0309080:CDS | 55.0% | |
| TGCAGCCTCTGTCTTAGACC+GGG | - | chr2_4:3518807-3518826 | None:intergenic | 55.0% | |
| GTGCAGCCTCTGTCTTAGAC+CGG | - | chr2_4:3518808-3518827 | None:intergenic | 55.0% | |
| ACGCCAAAAGGTTGCCCAAG+AGG | + | chr2_4:3518826-3518845 | Msa0309080:CDS | 55.0% | |
| !! | TGAGGCAAAGCTTGGTGCAG+AGG | + | chr2_4:3518928-3518947 | Msa0309080:CDS | 55.0% |
| TACAACGTTCGTTGGGTGGG+GGG | - | chr2_4:3519074-3519093 | None:intergenic | 55.0% | |
| CTACAACGTTCGTTGGGTGG+GGG | - | chr2_4:3519075-3519094 | None:intergenic | 55.0% | |
| ! | GCCTAGCAAGCTCTGACATG+TGG | + | chr2_4:3519371-3519390 | Msa0309080:three_prime_UTR | 55.0% |
| GGAGGTGATCGGAGAGAAGC+TGG | - | chr2_4:3516616-3516635 | None:intergenic | 60.0% | |
| TCGGAGGGTGGAGAAGGAGA+AGG | - | chr2_4:3516691-3516710 | None:intergenic | 60.0% | |
| GGAAGATCGGAGGGTGGAGA+AGG | - | chr2_4:3516697-3516716 | None:intergenic | 60.0% | |
| ! | GGTGGTGGTTGAAGGAGGAG+TGG | - | chr2_4:3516725-3516744 | None:intergenic | 60.0% |
| TTTAGGGATCGGCGATGGCG+GGG | + | chr2_4:3517038-3517057 | Msa0309080:CDS | 60.0% | |
| GACAGAGGCTGCACGCCAAA+AGG | + | chr2_4:3518814-3518833 | Msa0309080:CDS | 60.0% | |
| GAGGAGGCTGAGGCAAAGCT+TGG | + | chr2_4:3518920-3518939 | Msa0309080:CDS | 60.0% | |
| ACAACGTTCGTTGGGTGGGG+GGG | - | chr2_4:3519073-3519092 | None:intergenic | 60.0% | |
| CCTCTGTCTTAGACCGGGCC+TGG | - | chr2_4:3518802-3518821 | None:intergenic | 65.0% | |
| ! | CCAGGCCCGGTCTAAGACAG+AGG | + | chr2_4:3518799-3518818 | Msa0309080:intron | 65.0% |
| CGTTCGTTGGGTGGGGGGGA+TGG | - | chr2_4:3519069-3519088 | None:intergenic | 70.0% |
| Chromosome | Type | Strat | End | Strand | Name |
|---|---|---|---|---|---|
| chr2_4 | gene | 3516372 | 3519451 | 3516372 | ID=Msa0309080;Name=Msa0309080 |
| chr2_4 | mRNA | 3516372 | 3519451 | 3516372 | ID=Msa0309080-mRNA-1;Parent=Msa0309080;Name=Msa0309080-mRNA-1;_AED=0.03;_eAED=0.03;_QI=88|1|1|1|1|1|3|418|473 |
| chr2_4 | exon | 3516372 | 3517446 | 3516372 | ID=Msa0309080-mRNA-1:exon:1076;Parent=Msa0309080-mRNA-1 |
| chr2_4 | exon | 3518489 | 3518692 | 3518489 | ID=Msa0309080-mRNA-1:exon:1077;Parent=Msa0309080-mRNA-1 |
| chr2_4 | exon | 3518803 | 3519451 | 3518803 | ID=Msa0309080-mRNA-1:exon:1078;Parent=Msa0309080-mRNA-1 |
| chr2_4 | five_prime_UTR | 3516372 | 3516459 | 3516372 | ID=Msa0309080-mRNA-1:five_prime_utr;Parent=Msa0309080-mRNA-1 |
| chr2_4 | CDS | 3516460 | 3517446 | 3516460 | ID=Msa0309080-mRNA-1:cds;Parent=Msa0309080-mRNA-1 |
| chr2_4 | CDS | 3518489 | 3518692 | 3518489 | ID=Msa0309080-mRNA-1:cds;Parent=Msa0309080-mRNA-1 |
| chr2_4 | CDS | 3518803 | 3519033 | 3518803 | ID=Msa0309080-mRNA-1:cds;Parent=Msa0309080-mRNA-1 |
| chr2_4 | three_prime_UTR | 3519034 | 3519451 | 3519034 | ID=Msa0309080-mRNA-1:three_prime_utr;Parent=Msa0309080-mRNA-1 |
| Gene Sequence |
| Protein sequence |
