Alfalfa Gene Editing Database
Alfalfa Gene Editing Database
| Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa0270440 | XP_003592937.2 | 97.028 | 471 | 11 | 2 | 1 | 471 | 1 | 468 | 0.0 | 939 |
| Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa0270440 | sp|Q94CC0|Y5994_ARATH | 57.987 | 457 | 174 | 6 | 31 | 470 | 24 | 479 | 1.27e-176 | 506 |
| Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa0270440 | G7INA2 | 97.028 | 471 | 11 | 2 | 1 | 471 | 1 | 468 | 0.0 | 939 |
| Gene ID | Type | Classification |
|---|
| Gene ID | Type | Classification |
|---|
Co-expression Network
| Gene1 | Gene2 | correlation coefficient | p_value | FDR |
|---|---|---|---|---|
| Msa0004280 | Msa0270440 | -0.800151 | 1.648679e-48 | -8.615850e-47 |
| Msa0006700 | Msa0270440 | -0.805350 | 1.392547e-49 | -8.615850e-47 |
| Msa0038350 | Msa0270440 | 0.815998 | 6.934232e-52 | -8.615850e-47 |
| Msa0039420 | Msa0270440 | 0.819768 | 9.765082e-53 | -8.615850e-47 |
| Msa0077390 | Msa0270440 | -0.845319 | 4.372664e-59 | -8.615850e-47 |
| Msa0088550 | Msa0270440 | -0.800132 | 1.663314e-48 | -8.615850e-47 |
| Msa0094100 | Msa0270440 | -0.838421 | 2.904913e-57 | -8.615850e-47 |
| Msa0101810 | Msa0270440 | 0.819172 | 1.335161e-52 | -8.615850e-47 |
| Msa0105340 | Msa0270440 | -0.807212 | 5.644687e-50 | -8.615850e-47 |
| Msa0106120 | Msa0270440 | 0.817100 | 3.928562e-52 | -8.615850e-47 |
| Msa0145670 | Msa0270440 | -0.800841 | 1.192593e-48 | -8.615850e-47 |
| Msa0169140 | Msa0270440 | 0.802691 | 4.975193e-49 | -8.615850e-47 |
| Msa0179860 | Msa0270440 | -0.814231 | 1.712118e-51 | -8.615850e-47 |
| Msa0185640 | Msa0270440 | 0.869566 | 2.813858e-66 | -8.615850e-47 |
| Msa0195770 | Msa0270440 | -0.809398 | 1.930353e-50 | -8.615850e-47 |
| Msa0196130 | Msa0270440 | 0.802410 | 5.684849e-49 | -8.615850e-47 |
| Msa0215320 | Msa0270440 | 0.827938 | 1.186447e-54 | -8.615850e-47 |
| Msa0217400 | Msa0270440 | -0.803540 | 3.320094e-49 | -8.615850e-47 |
| Msa0223410 | Msa0270440 | 0.803958 | 2.718973e-49 | -8.615850e-47 |
| Msa0226250 | Msa0270440 | -0.821626 | 3.654215e-53 | -8.615850e-47 |
| Msa0235550 | Msa0270440 | -0.806321 | 8.707421e-50 | -8.615850e-47 |
| Msa0256500 | Msa0270440 | 0.833192 | 6.139839e-56 | -8.615850e-47 |
| Msa0257250 | Msa0270440 | -0.802064 | 6.699067e-49 | -8.615850e-47 |
| Msa0258670 | Msa0270440 | 0.805283 | 1.438602e-49 | -8.615850e-47 |
| Msa0265820 | Msa0270440 | -0.848878 | 4.629082e-60 | -8.615850e-47 |
| Msa0266000 | Msa0270440 | 0.802571 | 5.266124e-49 | -8.615850e-47 |
| Msa0269360 | Msa0270440 | -0.810116 | 1.352317e-50 | -8.615850e-47 |
| Msa0270440 | Msa0274520 | -0.814125 | 1.806875e-51 | -8.615850e-47 |
| Msa0270440 | Msa0280660 | 0.809429 | 1.900553e-50 | -8.615850e-47 |
| Msa0270440 | Msa0282590 | -0.801428 | 9.048630e-49 | -8.615850e-47 |
| Msa0270440 | Msa0288330 | -0.815913 | 7.246238e-52 | -8.615850e-47 |
| Msa0270440 | Msa0295640 | 0.831041 | 2.089458e-55 | -8.615850e-47 |
| Msa0270440 | Msa0296560 | -0.811920 | 5.499947e-51 | -8.615850e-47 |
| Msa0270440 | Msa0304740 | -0.807297 | 5.414313e-50 | -8.615850e-47 |
| Msa0270440 | Msa0309080 | 0.986738 | 8.414831e-168 | -8.615850e-47 |
| Msa0270440 | Msa0312690 | 0.812827 | 3.485051e-51 | -8.615850e-47 |
| Msa0270440 | Msa0327860 | -0.825494 | 4.546850e-54 | -8.615850e-47 |
| Msa0270440 | Msa0331590 | -0.810603 | 1.061685e-50 | -8.615850e-47 |
| Msa0270440 | Msa0331920 | -0.811104 | 8.271580e-51 | -8.615850e-47 |
| Msa0270440 | Msa0342200 | -0.821070 | 4.908279e-53 | -8.615850e-47 |
| Msa0270440 | Msa0342340 | 0.873707 | 1.193764e-67 | -8.615850e-47 |
| Msa0270440 | Msa0344830 | -0.802582 | 5.240189e-49 | -8.615850e-47 |
| Msa0270440 | Msa0354800 | 0.836059 | 1.168124e-56 | -8.615850e-47 |
| Msa0270440 | Msa0356550 | 0.802934 | 4.432166e-49 | -8.615850e-47 |
| Msa0270440 | Msa0362740 | -0.836740 | 7.837996e-57 | -8.615850e-47 |
| Msa0270440 | Msa0371420 | 0.806311 | 8.750401e-50 | -8.615850e-47 |
| Msa0270440 | Msa0371570 | -0.804111 | 2.526531e-49 | -8.615850e-47 |
| Msa0270440 | Msa0375060 | 0.804248 | 2.366694e-49 | -8.615850e-47 |
| Msa0270440 | Msa0376770 | 0.804034 | 2.622370e-49 | -8.615850e-47 |
| Msa0270440 | Msa0409820 | -0.801822 | 7.512019e-49 | -8.615850e-47 |
| Msa0270440 | Msa0414070 | -0.813187 | 2.906701e-51 | -8.615850e-47 |
| Msa0270440 | Msa0419990 | -0.820587 | 6.339794e-53 | -8.615850e-47 |
| Msa0270440 | Msa0437710 | -0.846331 | 2.322884e-59 | -8.615850e-47 |
| Msa0270440 | Msa0442850 | -0.813067 | 3.087114e-51 | -8.615850e-47 |
| Msa0270440 | Msa0448550 | 0.810695 | 1.014406e-50 | -8.615850e-47 |
| Msa0270440 | Msa0449590 | 0.818851 | 1.579678e-52 | -8.615850e-47 |
| Msa0270440 | Msa0449760 | -0.812524 | 4.060899e-51 | -8.615850e-47 |
| Msa0270440 | Msa0459770 | 0.812211 | 4.751581e-51 | -8.615850e-47 |
| Msa0270440 | Msa0465680 | 0.842310 | 2.796459e-58 | -8.615850e-47 |
| Msa0270440 | Msa0465970 | -0.822788 | 1.963587e-53 | -8.615850e-47 |
| Msa0270440 | Msa0480320 | -0.831508 | 1.604739e-55 | -8.615850e-47 |
| Msa0270440 | Msa0490350 | -0.804688 | 1.915304e-49 | -8.615850e-47 |
| Msa0270440 | Msa0509970 | -0.843925 | 1.038024e-58 | -8.615850e-47 |
| Msa0270440 | Msa0516450 | -0.812910 | 3.342350e-51 | -8.615850e-47 |
| Msa0270440 | Msa0524890 | 0.881007 | 3.432922e-70 | -8.615850e-47 |
| Msa0270440 | Msa0528970 | -0.866078 | 3.708159e-65 | -8.615850e-47 |
| Msa0270440 | Msa0531970 | 0.814597 | 1.421037e-51 | -8.615850e-47 |
| Msa0270440 | Msa0531990 | 0.828866 | 7.083535e-55 | -8.615850e-47 |
| Msa0270440 | Msa0532100 | 0.829687 | 4.476707e-55 | -8.615850e-47 |
| Msa0270440 | Msa0538700 | -0.805777 | 1.133389e-49 | -8.615850e-47 |
| Msa0270440 | Msa0540070 | -0.826257 | 2.996405e-54 | -8.615850e-47 |
| Msa0270440 | Msa0543900 | -0.807817 | 4.200589e-50 | -8.615850e-47 |
| Msa0270440 | Msa0548280 | 0.821372 | 4.180616e-53 | -8.615850e-47 |
| Msa0270440 | Msa0553460 | -0.800701 | 1.273752e-48 | -8.615850e-47 |
| Msa0270440 | Msa0557680 | -0.803036 | 4.222973e-49 | -8.615850e-47 |
| Msa0270440 | Msa0562650 | -0.829436 | 5.152486e-55 | -8.615850e-47 |
| Msa0270440 | Msa0563140 | -0.838851 | 2.249867e-57 | -8.615850e-47 |
| Msa0270440 | Msa0564510 | -0.830801 | 2.393868e-55 | -8.615850e-47 |
| Msa0270440 | Msa0576400 | 0.804788 | 1.825865e-49 | -8.615850e-47 |
| Msa0270440 | Msa0576990 | 0.832939 | 7.098100e-56 | -8.615850e-47 |
| Msa0270440 | Msa0581760 | -0.801883 | 7.297983e-49 | -8.615850e-47 |
| Msa0270440 | Msa0599770 | -0.808009 | 3.823384e-50 | -8.615850e-47 |
| Msa0270440 | Msa0599890 | -0.815702 | 8.073288e-52 | -8.615850e-47 |
| Msa0270440 | Msa0607540 | -0.805349 | 1.393383e-49 | -8.615850e-47 |
| Msa0270440 | Msa0616560 | 0.854641 | 1.075112e-61 | -8.615850e-47 |
| Msa0270440 | Msa0617370 | -0.807128 | 5.880837e-50 | -8.615850e-47 |
| Msa0270440 | Msa0617560 | 0.803434 | 3.492582e-49 | -8.615850e-47 |
| Msa0270440 | Msa0621590 | -0.805414 | 1.350498e-49 | -8.615850e-47 |
| Msa0270440 | Msa0621890 | -0.814173 | 1.763134e-51 | -8.615850e-47 |
| Msa0270440 | Msa0640380 | -0.802823 | 4.671648e-49 | -8.615850e-47 |
| Msa0270440 | Msa0641020 | -0.806181 | 9.316106e-50 | -8.615850e-47 |
| Msa0270440 | Msa0641450 | -0.832342 | 9.982614e-56 | -8.615850e-47 |
| Msa0270440 | Msa0647450 | 0.818461 | 1.937141e-52 | -8.615850e-47 |
| Msa0270440 | Msa0649970 | -0.804757 | 1.852901e-49 | -8.615850e-47 |
| Msa0270440 | Msa0655990 | 0.853907 | 1.751994e-61 | -8.615850e-47 |
| Msa0270440 | Msa0657670 | -0.818272 | 2.137727e-52 | -8.615850e-47 |
| Msa0270440 | Msa0660880 | 0.827014 | 1.976991e-54 | -8.615850e-47 |
| Msa0270440 | Msa0677820 | -0.827165 | 1.818266e-54 | -8.615850e-47 |
| Msa0270440 | Msa0678820 | -0.808400 | 3.155388e-50 | -8.615850e-47 |
| Msa0270440 | Msa0679990 | -0.816131 | 6.477204e-52 | -8.615850e-47 |
| Msa0270440 | Msa0688550 | -0.839422 | 1.600002e-57 | -8.615850e-47 |
| Msa0270440 | Msa0697140 | -0.818049 | 2.400983e-52 | -8.615850e-47 |
| Msa0270440 | Msa0697200 | -0.812088 | 5.055443e-51 | -8.615850e-47 |
| Msa0270440 | Msa0699920 | 0.862141 | 6.251816e-64 | -8.615850e-47 |
| Msa0270440 | Msa0701840 | 0.861767 | 8.139443e-64 | -8.615850e-47 |
| Msa0270440 | Msa0715720 | -0.836979 | 6.811366e-57 | -8.615850e-47 |
| Msa0270440 | Msa0716740 | 0.840114 | 1.056326e-57 | -8.615850e-47 |
| Msa0270440 | Msa0718240 | -0.820820 | 5.603084e-53 | -8.615850e-47 |
| Msa0270440 | Msa0718470 | -0.804617 | 1.982683e-49 | -8.615850e-47 |
| Msa0270440 | Msa0719490 | 0.862757 | 4.042072e-64 | -8.615850e-47 |
| Msa0270440 | Msa0722930 | -0.817622 | 2.997602e-52 | -8.615850e-47 |
| Msa0270440 | Msa0723140 | -0.800794 | 1.219236e-48 | -8.615850e-47 |
| Msa0270440 | Msa0743720 | -0.806086 | 9.755094e-50 | -8.615850e-47 |
| Msa0270440 | Msa0750380 | -0.800664 | 1.295859e-48 | -8.615850e-47 |
| Msa0270440 | Msa0752580 | -0.822415 | 2.397938e-53 | -8.615850e-47 |
| Msa0270440 | Msa0754500 | -0.809018 | 2.327713e-50 | -8.615850e-47 |
| Msa0270440 | Msa0773610 | -0.815158 | 1.067062e-51 | -8.615850e-47 |
| Msa0270440 | Msa0777930 | -0.808325 | 3.274574e-50 | -8.615850e-47 |
| Msa0270440 | Msa0781220 | 0.803651 | 3.149386e-49 | -8.615850e-47 |
| Msa0270440 | Msa0799290 | 0.831866 | 1.309049e-55 | -8.615850e-47 |
| Msa0270440 | Msa0801100 | -0.808180 | 3.514875e-50 | -8.615850e-47 |
| Msa0270440 | Msa0802470 | 0.834795 | 2.438354e-56 | -8.615850e-47 |
| Msa0270440 | Msa0830900 | -0.819669 | 1.028471e-52 | -8.615850e-47 |
| Msa0270440 | Msa0832370 | -0.802737 | 4.866806e-49 | -8.615850e-47 |
| Msa0270440 | Msa0835920 | -0.810875 | 9.272052e-51 | -8.615850e-47 |
| Msa0270440 | Msa0837510 | 0.831530 | 1.584419e-55 | -8.615850e-47 |
| Msa0270440 | Msa0839330 | -0.819627 | 1.051591e-52 | -8.615850e-47 |
| Msa0270440 | Msa0843280 | -0.801890 | 7.273989e-49 | -8.615850e-47 |
| Msa0270440 | Msa0847200 | -0.805363 | 1.383898e-49 | -8.615850e-47 |
| Msa0270440 | Msa0859430 | 0.843363 | 1.467664e-58 | -8.615850e-47 |
| Msa0270440 | Msa0876850 | 0.819094 | 1.390927e-52 | -8.615850e-47 |
| Msa0270440 | Msa0885270 | -0.807148 | 5.823252e-50 | -8.615850e-47 |
| Msa0270440 | Msa0886660 | -0.802679 | 5.003108e-49 | -8.615850e-47 |
| Msa0270440 | Msa0890250 | -0.806724 | 7.158538e-50 | -8.615850e-47 |
| Msa0270440 | Msa0891040 | -0.813345 | 2.683396e-51 | -8.615850e-47 |
| Msa0270440 | Msa0896210 | -0.804699 | 1.906078e-49 | -8.615850e-47 |
| Msa0270440 | Msa0900200 | -0.817555 | 3.103193e-52 | -8.615850e-47 |
| Msa0270440 | Msa0909710 | -0.809371 | 1.956250e-50 | -8.615850e-47 |
| Msa0270440 | Msa0919520 | -0.803982 | 2.687392e-49 | -8.615850e-47 |
| Msa0270440 | Msa0937940 | -0.804261 | 2.351049e-49 | -8.615850e-47 |
| Msa0270440 | Msa0942080 | 0.811428 | 7.036689e-51 | -8.615850e-47 |
| Msa0270440 | Msa0946120 | -0.807545 | 4.797507e-50 | -8.615850e-47 |
| Msa0270440 | Msa0951720 | -0.842850 | 2.010519e-58 | -8.615850e-47 |
| Msa0270440 | Msa0956390 | -0.800679 | 1.286998e-48 | -8.615850e-47 |
| Msa0270440 | Msa0961420 | 0.861214 | 1.200481e-63 | -8.615850e-47 |
| Msa0270440 | Msa0965520 | -0.824155 | 9.409496e-54 | -8.615850e-47 |
| Msa0270440 | Msa0968320 | 0.820338 | 7.229220e-53 | -8.615850e-47 |
| Msa0270440 | Msa0969570 | -0.801818 | 7.524268e-49 | -8.615850e-47 |
| Msa0270440 | Msa0980440 | -0.834842 | 2.372183e-56 | -8.615850e-47 |
| Msa0270440 | Msa0988500 | -0.819678 | 1.023750e-52 | -8.615850e-47 |
| Msa0270440 | Msa0990960 | -0.820171 | 7.898542e-53 | -8.615850e-47 |
| Msa0270440 | Msa0991670 | -0.801836 | 7.460580e-49 | -8.615850e-47 |
| Msa0270440 | Msa0999960 | 0.816924 | 4.302862e-52 | -8.615850e-47 |
| Msa0270440 | Msa1000020 | -0.810882 | 9.238718e-51 | -8.615850e-47 |
| Msa0270440 | Msa1008340 | -0.832684 | 8.212968e-56 | -8.615850e-47 |
| Msa0270440 | Msa1008490 | -0.831033 | 2.099897e-55 | -8.615850e-47 |
| Msa0270440 | Msa1009000 | -0.803431 | 3.497428e-49 | -8.615850e-47 |
| Msa0270440 | Msa1019840 | 0.834837 | 2.378579e-56 | -8.615850e-47 |
| Msa0270440 | Msa1026760 | -0.801511 | 8.699731e-49 | -8.615850e-47 |
| Msa0270440 | Msa1036390 | -0.839554 | 1.478723e-57 | -8.615850e-47 |
| Msa0270440 | Msa1038050 | -0.803129 | 4.038797e-49 | -8.615850e-47 |
| Msa0270440 | Msa1042710 | -0.826373 | 2.811577e-54 | -8.615850e-47 |
| Msa0270440 | Msa1049950 | -0.822362 | 2.466428e-53 | -8.615850e-47 |
| Msa0270440 | Msa1075220 | 0.836248 | 1.045936e-56 | -8.615850e-47 |
| Msa0270440 | Msa1076680 | -0.838212 | 3.288126e-57 | -8.615850e-47 |
| Msa0270440 | Msa1077390 | -0.809330 | 1.996078e-50 | -8.615850e-47 |
| Msa0270440 | Msa1081600 | -0.800384 | 1.478427e-48 | -8.615850e-47 |
| Msa0270440 | Msa1081700 | -0.805994 | 1.020073e-49 | -8.615850e-47 |
| Msa0270440 | Msa1083410 | -0.829012 | 6.529366e-55 | -8.615850e-47 |
| Msa0270440 | Msa1085960 | 0.823142 | 1.624096e-53 | -8.615850e-47 |
| Msa0270440 | Msa1087530 | -0.825609 | 4.269849e-54 | -8.615850e-47 |
| Msa0270440 | Msa1093070 | 0.807282 | 5.455442e-50 | -8.615850e-47 |
| Msa0270440 | Msa1098560 | -0.827368 | 1.626183e-54 | -8.615850e-47 |
| Msa0270440 | Msa1116130 | 0.815173 | 1.058522e-51 | -8.615850e-47 |
| Msa0270440 | Msa1130270 | 0.800831 | 1.198482e-48 | -8.615850e-47 |
| Msa0270440 | Msa1131940 | 0.830230 | 3.300900e-55 | -8.615850e-47 |
| Msa0270440 | Msa1139000 | 0.804682 | 1.921137e-49 | -8.615850e-47 |
| Msa0270440 | Msa1139240 | -0.851075 | 1.123950e-60 | -8.615850e-47 |
| Msa0270440 | Msa1154070 | -0.802859 | 4.593953e-49 | -8.615850e-47 |
| Msa0270440 | Msa1162550 | 0.828981 | 6.645056e-55 | -8.615850e-47 |
| Msa0270440 | Msa1165360 | -0.800449 | 1.433707e-48 | -8.615850e-47 |
| Msa0270440 | Msa1166370 | -0.813456 | 2.536901e-51 | -8.615850e-47 |
| Msa0270440 | Msa1168680 | 0.808783 | 2.613830e-50 | -8.615850e-47 |
| Msa0270440 | Msa1168730 | 0.815996 | 6.943216e-52 | -8.615850e-47 |
| Msa0270440 | Msa1184730 | -0.848184 | 7.204438e-60 | -8.615850e-47 |
| Msa0270440 | Msa1188420 | -0.833423 | 5.379855e-56 | -8.615850e-47 |
| Msa0270440 | Msa1204980 | 0.874229 | 7.948148e-68 | -8.615850e-47 |
| Msa0270440 | Msa1205010 | 0.876559 | 1.267840e-68 | -8.615850e-47 |
| Msa0270440 | Msa1205130 | -0.841523 | 4.512998e-58 | -8.615850e-47 |
| Msa0270440 | Msa1207480 | 0.805186 | 1.507402e-49 | -8.615850e-47 |
| Msa0270440 | Msa1213440 | 0.848903 | 4.555388e-60 | -8.615850e-47 |
| Msa0270440 | Msa1221200 | 0.809287 | 2.038968e-50 | -8.615850e-47 |
| Msa0270440 | Msa1222970 | -0.805549 | 1.265181e-49 | -8.615850e-47 |
| Msa0270440 | Msa1228210 | -0.825309 | 5.027883e-54 | -8.615850e-47 |
| Msa0270440 | Msa1252070 | -0.810022 | 1.416903e-50 | -8.615850e-47 |
| Msa0270440 | Msa1252390 | -0.828959 | 6.724880e-55 | -8.615850e-47 |
| Msa0270440 | Msa1254950 | -0.819770 | 9.754742e-53 | -8.615850e-47 |
| Msa0270440 | Msa1256540 | 0.872629 | 2.746755e-67 | -8.615850e-47 |
| Msa0270440 | Msa1257870 | 0.825322 | 4.993006e-54 | -8.615850e-47 |
| Msa0270440 | Msa1260490 | 0.841082 | 5.896009e-58 | -8.615850e-47 |
| Msa0270440 | Msa1265340 | 0.800716 | 1.264805e-48 | -8.615850e-47 |
| Msa0270440 | Msa1271280 | -0.804410 | 2.189577e-49 | -8.615850e-47 |
| Msa0270440 | Msa1271300 | -0.811110 | 8.248106e-51 | -8.615850e-47 |
| Msa0270440 | Msa1279860 | -0.804084 | 2.559921e-49 | -8.615850e-47 |
| Msa0270440 | Msa1279870 | -0.802573 | 5.263130e-49 | -8.615850e-47 |
| Msa0270440 | Msa1280130 | -0.811516 | 6.732841e-51 | -8.615850e-47 |
| Msa0270440 | Msa1287560 | -0.806283 | 8.870087e-50 | -8.615850e-47 |
| Msa0270440 | Msa1289830 | 0.868147 | 8.100636e-66 | -8.615850e-47 |
| Msa0270440 | Msa1295690 | -0.814237 | 1.706263e-51 | -8.615850e-47 |
| Msa0270440 | Msa1296960 | 0.873773 | 1.133448e-67 | -8.615850e-47 |
| Msa0270440 | Msa1308480 | -0.803694 | 3.085393e-49 | -8.615850e-47 |
| Msa0270440 | Msa1316560 | 0.824370 | 8.374403e-54 | -8.615850e-47 |
| Msa0270440 | Msa1329990 | -0.822420 | 2.391417e-53 | -8.615850e-47 |
| Msa0270440 | Msa1331690 | 0.843669 | 1.215784e-58 | -8.615850e-47 |
| Msa0270440 | Msa1342430 | -0.804329 | 2.275877e-49 | -8.615850e-47 |
| Msa0270440 | Msa1347290 | -0.803010 | 4.275565e-49 | -8.615850e-47 |
| Msa0270440 | Msa1358870 | 0.805597 | 1.236495e-49 | -8.615850e-47 |
| Msa0270440 | Msa1367080 | -0.801664 | 8.092403e-49 | -8.615850e-47 |
| Msa0270440 | Msa1369530 | -0.810235 | 1.275186e-50 | -8.615850e-47 |
| Msa0270440 | Msa1371080 | 0.816337 | 5.824878e-52 | -8.615850e-47 |
| Msa0270440 | Msa1384120 | 0.802151 | 6.428808e-49 | -8.615850e-47 |
| Msa0270440 | Msa1385620 | -0.827416 | 1.583249e-54 | -8.615850e-47 |
| Msa0270440 | Msa1386520 | -0.802793 | 4.738707e-49 | -8.615850e-47 |
| Msa0270440 | Msa1395230 | 0.803876 | 2.827597e-49 | -8.615850e-47 |
| Msa0270440 | Msa1424000 | -0.801654 | 8.130033e-49 | -8.615850e-47 |
| Msa0270440 | Msa1438270 | -0.849184 | 3.805995e-60 | -8.615850e-47 |
| Msa0270440 | Msa1444060 | 0.803448 | 3.469568e-49 | -8.615850e-47 |
| Msa0270440 | Msa1447440 | -0.812418 | 4.281811e-51 | -8.615850e-47 |
| Msa0270440 | Msa1451620 | 0.832835 | 7.535639e-56 | -8.615850e-47 |
| Msa0270440 | Msa1453710 | -0.804697 | 1.907197e-49 | -8.615850e-47 |
| Msa0270440 | Msa1454290 | 0.819374 | 1.201250e-52 | -8.615850e-47 |
| Msa0270440 | Msa1454910 | 0.818967 | 1.487030e-52 | -8.615850e-47 |
| Msa0270440 | Msa1457670 | 0.801945 | 7.084950e-49 | -8.615850e-47 |
| Msa0270440 | Msa1461250 | 0.827333 | 1.657355e-54 | -8.615850e-47 |
| Msa0270440 | Msa1464940 | -0.810199 | 1.297882e-50 | -8.615850e-47 |
PPI
| Gene1 | Gene2 | Type |
|---|
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa0270440 | MtrunA17_Chr2g0277181 | 97.028 | 471 | 11 | 2 | 1 | 471 | 1 | 468 | 0.0 | 939 |
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa0270440 | AT4G24330.1 | 58.996 | 478 | 181 | 6 | 5 | 470 | 3 | 477 | 0.0 | 578 |
| Msa0270440 | AT5G49945.1 | 57.987 | 457 | 174 | 6 | 31 | 470 | 24 | 479 | 1.29e-177 | 506 |
Find 147 sgRNAs with CRISPR-Local
Find 258 sgRNAs with CRISPR-GE
CRISPR-Local
| sgRNA_sequence | on_target_score | Position | Region |
|---|---|---|---|
| CAACCACCACCTTCGATTTC+TGG | 0.098592 | 2_3:-1688843 | Msa0270440:CDS |
| TGCATAATTATCTTGGATTT+TGG | 0.153202 | 2_3:-1689171 | Msa0270440:five_prime_UTR |
| TGTTTCTAAGATCCAAATTT+TGG | 0.178354 | 2_3:+1686375 | None:intergenic |
| TATTGCTAGGATTTATAATA+TGG | 0.212888 | 2_3:-1688401 | Msa0270440:CDS |
| AAGCTATGCATAAGGATTAT+AGG | 0.261825 | 2_3:-1688282 | Msa0270440:CDS |
| CAATTACTTCACTGGTAAAA+AGG | 0.264314 | 2_3:-1688638 | Msa0270440:CDS |
| AAGGAGAAGGAGTAGGATTA+GGG | 0.264529 | 2_3:+1688902 | None:intergenic |
| GTTGGTGTTATCGGTGGATT+TGG | 0.274086 | 2_3:+1688753 | None:intergenic |
| CATAAAACTTAAACGTTGTT+TGG | 0.275872 | 2_3:+1688488 | None:intergenic |
| GGTTGAAGGAGGAGTGGATT+TGG | 0.276521 | 2_3:+1688861 | None:intergenic |
| GTTGAAGGAGGAGTGGATTT+GGG | 0.298422 | 2_3:+1688862 | None:intergenic |
| TATTATTCACAGTAGCTTAC+TGG | 0.298937 | 2_3:-1686173 | Msa0270440:three_prime_UTR |
| TCAAGGGTTGTTGGCAACTA+TGG | 0.308146 | 2_3:-1688446 | Msa0270440:CDS |
| GAAGGAGAAGGAGTAGGATT+AGG | 0.308252 | 2_3:+1688901 | None:intergenic |
| GTACCTCTTGGGCAACCTTT+TGG | 0.310100 | 2_3:+1686748 | None:intergenic |
| TTCTTTGCATGGCCTCTTGT+TGG | 0.314550 | 2_3:+1686706 | None:intergenic |
| CCGTATTATATTGACTTGAT+TGG | 0.319009 | 2_3:-1686929 | Msa0270440:CDS |
| CTTGCAGATCATCAAGAATT+AGG | 0.324483 | 2_3:+1686548 | None:intergenic |
| AACCACCACCTTCGATTTCT+GGG | 0.331040 | 2_3:-1688842 | Msa0270440:CDS |
| TCGTGCTCGCCAAATGAAAA+AGG | 0.334109 | 2_3:-1686601 | Msa0270440:CDS |
| AAAATTTAAGGAAATTCATT+AGG | 0.336515 | 2_3:+1686244 | None:intergenic |
| AGATAGACGCGACCACATTT+TGG | 0.338830 | 2_3:-1686413 | Msa0270440:three_prime_UTR |
| CTCTGCCTTTCTTCTTTGCA+TGG | 0.349420 | 2_3:+1686695 | None:intergenic |
| AGCTATGCATAAGGATTATA+GGG | 0.351733 | 2_3:-1688281 | Msa0270440:CDS |
| GTGGTTGGAACTTGGAAATC+AGG | 0.359744 | 2_3:+1688781 | None:intergenic |
| TTAGGGTTTGGATTGGGATT+GGG | 0.360603 | 2_3:+1688919 | None:intergenic |
| ACAAGAAAGTATTGCTGTTC+AGG | 0.365938 | 2_3:-1687009 | Msa0270440:CDS |
| GAATTCACCGTCATCGTCTT+CGG | 0.369999 | 2_3:+1689005 | None:intergenic |
| GAAGGAGTAGGATTAGGGTT+TGG | 0.371519 | 2_3:+1688907 | None:intergenic |
| GAAGTTCTTTCTGTACCTCT+TGG | 0.375756 | 2_3:+1686736 | None:intergenic |
| AGCGGTGGTGTTGGTGTTAT+CGG | 0.389309 | 2_3:+1688744 | None:intergenic |
| GGATGTAGATTAAAGTTATC+AGG | 0.391350 | 2_3:+1686342 | None:intergenic |
| ACTACAACGTTCGTTGGGTG+GGG | 0.394036 | 2_3:+1686504 | None:intergenic |
| GGGTTGTTGCATAATTATCT+TGG | 0.400169 | 2_3:-1689178 | Msa0270440:five_prime_UTR |
| ACGAGAACATAGCACTTTCA+TGG | 0.405682 | 2_3:-1688612 | Msa0270440:CDS |
| GGAGGTGATCGGAGAGAAGC+TGG | 0.418900 | 2_3:+1688964 | None:intergenic |
| AACTACAACGTTCGTTGGGT+GGG | 0.428555 | 2_3:+1686503 | None:intergenic |
| GTAGGATTAGGGTTTGGATT+GGG | 0.429352 | 2_3:+1688913 | None:intergenic |
| AAGTTCTTTCTGTACCTCTT+GGG | 0.429385 | 2_3:+1686737 | None:intergenic |
| TTGGTGTTATCGGTGGATTT+GGG | 0.431462 | 2_3:+1688754 | None:intergenic |
| GTTTGGATTGGGATTGGGAT+CGG | 0.432518 | 2_3:+1688924 | None:intergenic |
| AATACTTTCTTGTGTATGCC+AGG | 0.432533 | 2_3:+1687019 | None:intergenic |
| TGGGATCGGTGGTTGGAACT+TGG | 0.435416 | 2_3:+1688773 | None:intergenic |
| TTCACCGTTGAGATCCTTTG+CGG | 0.441976 | 2_3:-1688685 | Msa0270440:CDS |
| GGAAGATCGGAGGGTGGAGA+AGG | 0.446062 | 2_3:+1688883 | None:intergenic |
| ATTAGGGTTTGGATTGGGAT+TGG | 0.446204 | 2_3:+1688918 | None:intergenic |
| GTGCAGCCTCTGTCTTAGAC+CGG | 0.451076 | 2_3:+1686772 | None:intergenic |
| TTATGACTCCTCCTACTTCA+AGG | 0.451253 | 2_3:-1688237 | Msa0270440:CDS |
| TGCTGTTATTTCTGAGTCTA+GGG | 0.451354 | 2_3:-1688194 | Msa0270440:CDS |
| ACTCCTTTGTTGTTGAAAGA+AGG | 0.457036 | 2_3:-1688511 | Msa0270440:CDS |
| AAATCGAAGGTGGTGGTTGA+AGG | 0.457098 | 2_3:+1688847 | None:intergenic |
| TTGCTGTTATTTCTGAGTCT+AGG | 0.458238 | 2_3:-1688195 | Msa0270440:CDS |
| AAGATATAAATTGAGTTCTC+AGG | 0.467578 | 2_3:-1686906 | Msa0270440:intron |
| AAGATACTGTCAAGGGTTGT+TGG | 0.469800 | 2_3:-1688455 | Msa0270440:CDS |
| CATTGCCATGATTCTACAAA+AGG | 0.470317 | 2_3:+1686471 | None:intergenic |
| CACCCAACGAACGTTGTAGT+TGG | 0.474539 | 2_3:-1686501 | Msa0270440:three_prime_UTR |
| AGGAGTGGATTTGGGAAGAT+CGG | 0.475376 | 2_3:+1688870 | None:intergenic |
| CCAATCAAGTCAATATAATA+CGG | 0.475546 | 2_3:+1686929 | None:intergenic |
| TTCGCTCTCAATTACTTCAC+TGG | 0.478131 | 2_3:-1688646 | Msa0270440:CDS |
| TGGATTTGCCATTGGAAATG+AGG | 0.478220 | 2_3:+1689122 | None:intergenic |
| GTGGATTTGGGATCGGTGGT+TGG | 0.478643 | 2_3:+1688766 | None:intergenic |
| AGCTGCTAAAGCTATGCATA+AGG | 0.479460 | 2_3:-1688290 | Msa0270440:CDS |
| GACAGAGGCTGCACGCCAAA+AGG | 0.482052 | 2_3:-1686763 | Msa0270440:CDS |
| CTCCTCCTACTTCAAGGAAG+TGG | 0.487356 | 2_3:-1688231 | Msa0270440:CDS |
| ACCCAACGAACGTTGTAGTT+GGG | 0.490138 | 2_3:-1686500 | Msa0270440:three_prime_UTR |
| GGTGGAGAAGGAGAAGGAGT+AGG | 0.499503 | 2_3:+1688895 | None:intergenic |
| CTACAACGTTCGTTGGGTGG+GGG | 0.500888 | 2_3:+1686505 | None:intergenic |
| AAAGATGATGGAGGAGGCTG+AGG | 0.501171 | 2_3:-1686667 | Msa0270440:CDS |
| ACCCAACTACAACGTTCGTT+GGG | 0.501431 | 2_3:+1686499 | None:intergenic |
| GAAACCTTCGAAATGAGAAT+CGG | 0.505706 | 2_3:+1689032 | None:intergenic |
| GAAATTGAGAAGGAGGTGAT+CGG | 0.506052 | 2_3:+1688953 | None:intergenic |
| ACAACGTTCGTTGGGTGGGG+GGG | 0.515904 | 2_3:+1686507 | None:intergenic |
| AGTAGGATTAGGGTTTGGAT+TGG | 0.517738 | 2_3:+1688912 | None:intergenic |
| AGAGGCCATGCAAAGAAGAA+AGG | 0.521432 | 2_3:-1686700 | Msa0270440:CDS |
| TACAACGTTCGTTGGGTGGG+GGG | 0.523253 | 2_3:+1686506 | None:intergenic |
| TTTAGGGATCGGCGATGGCG+GGG | 0.524169 | 2_3:-1688539 | Msa0270440:CDS |
| GACCCAACTACAACGTTCGT+TGG | 0.524838 | 2_3:+1686498 | None:intergenic |
| TGGATTGGGATTGGGATCGG+TGG | 0.525036 | 2_3:+1688927 | None:intergenic |
| ATAACTTTAATCTACATCCT+CGG | 0.525760 | 2_3:-1686338 | Msa0270440:three_prime_UTR |
| TCGGAGGGTGGAGAAGGAGA+AGG | 0.528190 | 2_3:+1688889 | None:intergenic |
| TCGCGTCTATCTAGCTAACA+TGG | 0.533156 | 2_3:+1686424 | None:intergenic |
| TGAGGCAAAGCTTGGTGCAG+AGG | 0.534453 | 2_3:-1686649 | Msa0270440:CDS |
| TGCAGCCTCTGTCTTAGACC+GGG | 0.536900 | 2_3:+1686773 | None:intergenic |
| CAATCCGATTCTCATTTCGA+AGG | 0.539734 | 2_3:-1689036 | Msa0270440:CDS |
| AGTGGATTTGGGAAGATCGG+AGG | 0.539885 | 2_3:+1688873 | None:intergenic |
| ATCGGTGGATTTGGGATCGG+TGG | 0.540015 | 2_3:+1688762 | None:intergenic |
| GAGGAGGCTGAGGCAAAGCT+TGG | 0.543326 | 2_3:-1686657 | Msa0270440:CDS |
| TCCTCCTACTTCAAGGAAGT+GGG | 0.544170 | 2_3:-1688230 | Msa0270440:CDS |
| GTGGAGAGAAATTGAGAAGG+AGG | 0.545006 | 2_3:+1688946 | None:intergenic |
| GTGGATTTGGGAAGATCGGA+GGG | 0.545353 | 2_3:+1688874 | None:intergenic |
| GTAGACATGATCTTATTGCT+AGG | 0.545819 | 2_3:-1688414 | Msa0270440:CDS |
| CGAGAACATAGCACTTTCAT+GGG | 0.547466 | 2_3:-1688611 | Msa0270440:CDS |
| CACTGATGCACTCATTGACC+AGG | 0.547628 | 2_3:-1688152 | Msa0270440:intron |
| TCGAAGGTGGTGGTTGAAGG+AGG | 0.549474 | 2_3:+1688850 | None:intergenic |
| CAACTACAACGTTCGTTGGG+TGG | 0.552077 | 2_3:+1686502 | None:intergenic |
| GTTATCGGTGGATTTGGGAT+CGG | 0.553039 | 2_3:+1688759 | None:intergenic |
| TTATATGAATGATGATGCTA+TGG | 0.558977 | 2_3:-1688344 | Msa0270440:CDS |
| TCGGAGAGAAGCTGGATCGA+TGG | 0.559887 | 2_3:+1688972 | None:intergenic |
| GAAATCAGGGTGTGGTTGAG+TGG | 0.563043 | 2_3:+1688795 | None:intergenic |
| ATTATCAGAAGCGGTGGTGT+TGG | 0.566463 | 2_3:+1688735 | None:intergenic |
| GGAACTTGGAAATCAGGGTG+TGG | 0.567818 | 2_3:+1688787 | None:intergenic |
| AAATCAGGGTGTGGTTGAGT+GGG | 0.568472 | 2_3:+1688796 | None:intergenic |
| GATTTGGGAAGATCGGAGGG+TGG | 0.569460 | 2_3:+1688877 | None:intergenic |
| CATCAAGAATTAGGCACCAC+GGG | 0.574200 | 2_3:+1686557 | None:intergenic |
| TGGCCTTCTTTCAACAACAA+AGG | 0.578438 | 2_3:+1688508 | None:intergenic |
| GGTGGTGGTTGAAGGAGGAG+TGG | 0.581447 | 2_3:+1688855 | None:intergenic |
| ACTTACAACCTCATTTCCAA+TGG | 0.585043 | 2_3:-1689130 | Msa0270440:exon |
| CATTTCTCCGACAATCACCC+TGG | 0.586446 | 2_3:-1687037 | Msa0270440:CDS |
| GAAACCCACTTCCTTGAAGT+AGG | 0.587052 | 2_3:+1688226 | None:intergenic |
| GTGTATGCCAGGGTGATTGT+CGG | 0.587355 | 2_3:+1687030 | None:intergenic |
| TCGGTGGAGAGAAATTGAGA+AGG | 0.588755 | 2_3:+1688943 | None:intergenic |
| TGGTTGGAACTTGGAAATCA+GGG | 0.589428 | 2_3:+1688782 | None:intergenic |
| GCCTAGCAAGCTCTGACATG+TGG | 0.591862 | 2_3:-1686206 | Msa0270440:three_prime_UTR |
| AGAGAAGCTGGATCGATGGA+AGG | 0.595249 | 2_3:+1688976 | None:intergenic |
| ACGGTGAAGGAACGTGGTTG+AGG | 0.599647 | 2_3:+1688700 | None:intergenic |
| ATACTTTCTTGTGTATGCCA+GGG | 0.600972 | 2_3:+1687020 | None:intergenic |
| CATGGCTGATATGACTCGAC+TGG | 0.602151 | 2_3:-1686963 | Msa0270440:CDS |
| GTCCCAGAAATCGAAGGTGG+TGG | 0.605691 | 2_3:+1688840 | None:intergenic |
| CCAGGCCCGGTCTAAGACAG+AGG | 0.610101 | 2_3:-1686778 | Msa0270440:intron |
| GCAAAGGATCTCAACGGTGA+AGG | 0.611372 | 2_3:+1688687 | None:intergenic |
| ACCACATGTCAGAGCTTGCT+AGG | 0.612179 | 2_3:+1686205 | None:intergenic |
| CGCGTCTATCTAGCTAACAT+GGG | 0.615479 | 2_3:+1686425 | None:intergenic |
| ACTTCGAAATATCCAACAAG+AGG | 0.620842 | 2_3:-1686718 | Msa0270440:CDS |
| ATCTCAACGGTGAAGGAACG+TGG | 0.621931 | 2_3:+1688694 | None:intergenic |
| ACCCACTTCCTTGAAGTAGG+AGG | 0.624318 | 2_3:+1688229 | None:intergenic |
| AGTGGAAGAAGATACTGTCA+AGG | 0.628369 | 2_3:-1688463 | Msa0270440:CDS |
| CCATGATTCTACAAAAGGCA+AGG | 0.629272 | 2_3:+1686476 | None:intergenic |
| ATACAAAATCCACCAAAATG+TGG | 0.630867 | 2_3:+1686401 | None:intergenic |
| GGCTGATATGACTCGACTGG+TGG | 0.633292 | 2_3:-1686960 | Msa0270440:CDS |
| ACGCCAAAAGGTTGCCCAAG+AGG | 0.633928 | 2_3:-1686751 | Msa0270440:CDS |
| ATGAGAATCGGATTGAACAA+AGG | 0.638117 | 2_3:+1689044 | None:intergenic |
| TTCGAAGCCGAAGACGATGA+CGG | 0.646446 | 2_3:-1689012 | Msa0270440:CDS |
| TGATAAGAAAACTACCGCAA+AGG | 0.646488 | 2_3:+1688671 | None:intergenic |
| TGGGACGACGATGAATTCGA+AGG | 0.647371 | 2_3:-1688823 | Msa0270440:CDS |
| TGCAAAGAAGAAAGGCAGAG+AGG | 0.649908 | 2_3:-1686692 | Msa0270440:CDS |
| AGGATTATAGGGATTTGCAG+AGG | 0.654212 | 2_3:-1688270 | Msa0270440:CDS |
| GTCTATCTAGCTAACATGGG+AGG | 0.661496 | 2_3:+1686428 | None:intergenic |
| ATCGTCGTCCCAGAAATCGA+AGG | 0.666868 | 2_3:+1688834 | None:intergenic |
| GGTGGTGTTGGTGTTATCGG+TGG | 0.674832 | 2_3:+1688747 | None:intergenic |
| TAACAATCAACTAGAAACCG+AGG | 0.675288 | 2_3:+1686321 | None:intergenic |
| TGCATAGTGAAAGTGAAGCG+AGG | 0.681519 | 2_3:+1689076 | None:intergenic |
| GTGGAAGAAGATACTGTCAA+GGG | 0.686143 | 2_3:-1688462 | Msa0270440:CDS |
| TCATCAAGAATTAGGCACCA+CGG | 0.686490 | 2_3:+1686556 | None:intergenic |
| GTCGTCCCAGAAATCGAAGG+TGG | 0.691523 | 2_3:+1688837 | None:intergenic |
| ACTACCGCAAAGGATCTCAA+CGG | 0.704572 | 2_3:+1688681 | None:intergenic |
| TAGACTCAGAAATAACAGCA+AGG | 0.709973 | 2_3:+1688197 | None:intergenic |
| CCAAGAATGAAAATGTCCCG+TGG | 0.746726 | 2_3:-1686573 | Msa0270440:CDS |
CRISPR-GE
| badsite warning | sgRNA_sequence | Strand | Position | Region | GC_content |
|---|---|---|---|---|---|
| !!! | AATTTTCATGTTTTAATCAT+TGG | - | chr2_3:1687251-1687270 | Msa0270440:intron | 15.0% |
| !! | AAAATTTAAGGAAATTCATT+AGG | + | chr2_3:1689106-1689125 | None:intergenic | 15.0% |
| !!! | AAGAAAAAGAAAAAGAGTTT+TGG | + | chr2_3:1686248-1686267 | None:intergenic | 20.0% |
| !!! | AGAAAAATTTCAGTCTTTTA+GGG | - | chr2_3:1686792-1686811 | Msa0270440:intron | 20.0% |
| !! | TATTGCTAGGATTTATAATA+TGG | - | chr2_3:1686946-1686965 | Msa0270440:CDS | 20.0% |
| !! | AATATTCCTCTTAAAATCAT+TGG | + | chr2_3:1687491-1687510 | None:intergenic | 20.0% |
| !!! | TGATTTTAAGAGGAATATTA+TGG | - | chr2_3:1687492-1687511 | Msa0270440:intron | 20.0% |
| !! | AATATAAGCAAAGTATACAT+TGG | + | chr2_3:1688492-1688511 | None:intergenic | 20.0% |
| !!! | ATTTTGTATGTACCAAAATT+TGG | - | chr2_3:1688960-1688979 | Msa0270440:CDS | 20.0% |
| !! | AGTATGTTGACAAAAAAAAA+GGG | + | chr2_3:1689060-1689079 | None:intergenic | 20.0% |
| !! | ATAGCAAGTGAAAAAATTTA+AGG | + | chr2_3:1689118-1689137 | None:intergenic | 20.0% |
| !!! | AAATTTTTTCACTTGCTATT+TGG | - | chr2_3:1689119-1689138 | Msa0270440:exon | 20.0% |
| !!! | TTTTGATTTAAGTTTGGAGT+GGG | - | chr2_3:1686149-1686168 | Msa0270440:three_prime_UTR | 25.0% |
| !! | TGCATAATTATCTTGGATTT+TGG | - | chr2_3:1686176-1686195 | Msa0270440:three_prime_UTR | 25.0% |
| !! | GAGAAAAATTTCAGTCTTTT+AGG | - | chr2_3:1686791-1686810 | Msa0270440:intron | 25.0% |
| ! | CATAAAACTTAAACGTTGTT+TGG | + | chr2_3:1686862-1686881 | None:intergenic | 25.0% |
| !! | AAAGTAATCTCATCTTTTGA+AGG | + | chr2_3:1686977-1686996 | None:intergenic | 25.0% |
| !!! | AAAAGATGAGATTACTTTTG+AGG | - | chr2_3:1686979-1686998 | Msa0270440:CDS | 25.0% |
| !! | TTATATGAATGATGATGCTA+TGG | - | chr2_3:1687003-1687022 | Msa0270440:CDS | 25.0% |
| ! | ATAAGAATGAAAATTGAACC+TGG | + | chr2_3:1687216-1687235 | None:intergenic | 25.0% |
| !!! | TTCATGTTTTAATCATTGGA+TGG | - | chr2_3:1687255-1687274 | Msa0270440:intron | 25.0% |
| !!! | TGAGTTTTAGAAGGTTATAT+TGG | - | chr2_3:1687348-1687367 | Msa0270440:intron | 25.0% |
| ! | GGATACATAATCATCATTAT+TGG | + | chr2_3:1687470-1687489 | None:intergenic | 25.0% |
| !! | ATGTATCCAATGATTTTAAG+AGG | - | chr2_3:1687482-1687501 | Msa0270440:intron | 25.0% |
| !! | AATAATCATGTCCAACATTT+TGG | - | chr2_3:1687519-1687538 | Msa0270440:intron | 25.0% |
| !! | ATAATCATGTCCAACATTTT+GGG | - | chr2_3:1687520-1687539 | Msa0270440:intron | 25.0% |
| ! | TCTGTGATAACTTATAGAAA+CGG | + | chr2_3:1687815-1687834 | None:intergenic | 25.0% |
| ! | AAACACAATTGTAAGTGTTT+GGG | + | chr2_3:1687890-1687909 | None:intergenic | 25.0% |
| ! | TAAACACAATTGTAAGTGTT+TGG | + | chr2_3:1687891-1687910 | None:intergenic | 25.0% |
| ! | TTATACAGAAACCACATAAA+GGG | + | chr2_3:1687952-1687971 | None:intergenic | 25.0% |
| ! | AAGGAAAAAAAAAATGAAGC+TGG | + | chr2_3:1687992-1688011 | None:intergenic | 25.0% |
| !!! | GCTTCATTTTTTTTTTCCTT+TGG | - | chr2_3:1687992-1688011 | Msa0270440:intron | 25.0% |
| !! | TGAAGTTAAAAGTTTGTTCT+TGG | - | chr2_3:1688204-1688223 | Msa0270440:CDS | 25.0% |
| !!! | AGCTATTTTTTGTATACTGT+AGG | - | chr2_3:1688237-1688256 | Msa0270440:CDS | 25.0% |
| !! | TTTTGTATACTGTAGGTTTT+TGG | - | chr2_3:1688244-1688263 | Msa0270440:CDS | 25.0% |
| !!! | TCTTTTGAGAAATTTGGAAA+AGG | - | chr2_3:1688274-1688293 | Msa0270440:CDS | 25.0% |
| ! | CCAATCAAGTCAATATAATA+CGG | + | chr2_3:1688421-1688440 | None:intergenic | 25.0% |
| ! | AAGATATAAATTGAGTTCTC+AGG | - | chr2_3:1688441-1688460 | Msa0270440:CDS | 25.0% |
| !! | CAAAGTATACATTGGTAATA+TGG | + | chr2_3:1688484-1688503 | None:intergenic | 25.0% |
| ! | TTTATGAACATCTTTATGCT+TGG | - | chr2_3:1688514-1688533 | Msa0270440:CDS | 25.0% |
| !!! | TGTTTCTAAGATCCAAATTT+TGG | + | chr2_3:1688975-1688994 | None:intergenic | 25.0% |
| ! | ATAACTTTAATCTACATCCT+CGG | - | chr2_3:1689009-1689028 | Msa0270440:CDS | 25.0% |
| ! | CAGTATGTTGACAAAAAAAA+AGG | + | chr2_3:1689061-1689080 | None:intergenic | 25.0% |
| !!! | GTTTTGATTTAAGTTTGGAG+TGG | - | chr2_3:1686148-1686167 | Msa0270440:three_prime_UTR | 30.0% |
| !!! | AACGTTTTGATTATCAGAAG+CGG | + | chr2_3:1686624-1686643 | None:intergenic | 30.0% |
| CAATTACTTCACTGGTAAAA+AGG | - | chr2_3:1686709-1686728 | Msa0270440:CDS | 30.0% | |
| !! | AATTTCAGTCTTTTAGGGAT+CGG | - | chr2_3:1686797-1686816 | Msa0270440:intron | 30.0% |
| !! | ACGTTTAAGTTTTATGCTAG+TGG | - | chr2_3:1686866-1686885 | Msa0270440:intron | 30.0% |
| AAGCTATGCATAAGGATTAT+AGG | - | chr2_3:1687065-1687084 | Msa0270440:CDS | 30.0% | |
| AGCTATGCATAAGGATTATA+GGG | - | chr2_3:1687066-1687085 | Msa0270440:CDS | 30.0% | |
| !!! | AATAAGCTCTGAGTTTTAGA+AGG | - | chr2_3:1687339-1687358 | Msa0270440:intron | 30.0% |
| AGTTGTCTTGGCTTATAATT+TGG | - | chr2_3:1687386-1687405 | Msa0270440:intron | 30.0% | |
| ! | TAATCATGTCCAACATTTTG+GGG | - | chr2_3:1687521-1687540 | Msa0270440:intron | 30.0% |
| GGATCAAATTACCTCATAAT+TGG | - | chr2_3:1687615-1687634 | Msa0270440:intron | 30.0% | |
| CTTATAGAAACGGTTTAATG+TGG | + | chr2_3:1687805-1687824 | None:intergenic | 30.0% | |
| TTCTATAAGTTATCACAGAG+AGG | - | chr2_3:1687816-1687835 | Msa0270440:intron | 30.0% | |
| TCTATAAGTTATCACAGAGA+GGG | - | chr2_3:1687817-1687836 | Msa0270440:intron | 30.0% | |
| GTTATACAGAAACCACATAA+AGG | + | chr2_3:1687953-1687972 | None:intergenic | 30.0% | |
| TCTGTATAACAGTATACCTT+TGG | - | chr2_3:1687963-1687982 | Msa0270440:intron | 30.0% | |
| ATAACAGACAAAACTACCAA+AGG | + | chr2_3:1688011-1688030 | None:intergenic | 30.0% | |
| TCATCACACAATCATATTCA+AGG | - | chr2_3:1688116-1688135 | Msa0270440:intron | 30.0% | |
| !! | GACAAGTCTTTTGAGAAATT+TGG | - | chr2_3:1688268-1688287 | Msa0270440:CDS | 30.0% |
| !! | CCGTATTATATTGACTTGAT+TGG | - | chr2_3:1688418-1688437 | Msa0270440:CDS | 30.0% |
| TTATGCACATGAGTTAATCA+AGG | + | chr2_3:1688541-1688560 | None:intergenic | 30.0% | |
| ATGTGCATAATACATAATCC+AGG | - | chr2_3:1688551-1688570 | Msa0270440:CDS | 30.0% | |
| ! | TTTTGCTTCTTTCTTTCGAA+TGG | + | chr2_3:1688724-1688743 | None:intergenic | 30.0% |
| ! | ATCTGCAAGTAGAATTTTGA+AGG | - | chr2_3:1688813-1688832 | Msa0270440:CDS | 30.0% |
| ATACAAAATCCACCAAAATG+TGG | + | chr2_3:1688949-1688968 | None:intergenic | 30.0% | |
| GGATGTAGATTAAAGTTATC+AGG | + | chr2_3:1689008-1689027 | None:intergenic | 30.0% | |
| TATTATTCACAGTAGCTTAC+TGG | - | chr2_3:1689174-1689193 | Msa0270440:five_prime_UTR | 30.0% | |
| GGGTTGTTGCATAATTATCT+TGG | - | chr2_3:1686169-1686188 | Msa0270440:three_prime_UTR | 35.0% | |
| ACTTACAACCTCATTTCCAA+TGG | - | chr2_3:1686217-1686236 | Msa0270440:three_prime_UTR | 35.0% | |
| !!! | AAGAGTTTTGGATTTGCCAT+TGG | + | chr2_3:1686236-1686255 | None:intergenic | 35.0% |
| ATGAGAATCGGATTGAACAA+AGG | + | chr2_3:1686306-1686325 | None:intergenic | 35.0% | |
| GAAACCTTCGAAATGAGAAT+CGG | + | chr2_3:1686318-1686337 | None:intergenic | 35.0% | |
| TGATAAGAAAACTACCGCAA+AGG | + | chr2_3:1686679-1686698 | None:intergenic | 35.0% | |
| !! | ACTCCTTTGTTGTTGAAAGA+AGG | - | chr2_3:1686836-1686855 | Msa0270440:intron | 35.0% |
| GTAGACATGATCTTATTGCT+AGG | - | chr2_3:1686933-1686952 | Msa0270440:CDS | 35.0% | |
| !!! | GGATCATGTTGTTTTTGCTA+TGG | - | chr2_3:1687024-1687043 | Msa0270440:CDS | 35.0% |
| TAGACTCAGAAATAACAGCA+AGG | + | chr2_3:1687153-1687172 | None:intergenic | 35.0% | |
| !! | TTGCTGTTATTTCTGAGTCT+AGG | - | chr2_3:1687152-1687171 | Msa0270440:intron | 35.0% |
| !! | TGCTGTTATTTCTGAGTCTA+GGG | - | chr2_3:1687153-1687172 | Msa0270440:intron | 35.0% |
| TGCCAAGAGAGATGAATAAA+AGG | - | chr2_3:1687282-1687301 | Msa0270440:intron | 35.0% | |
| GCCAAGAGAGATGAATAAAA+GGG | - | chr2_3:1687283-1687302 | Msa0270440:intron | 35.0% | |
| ! | TCCCTTTTATTCATCTCTCT+TGG | + | chr2_3:1687287-1687306 | None:intergenic | 35.0% |
| TATAAGCCAAGACAACTACT+AGG | + | chr2_3:1687383-1687402 | None:intergenic | 35.0% | |
| ! | ATGAGTTGGATCCAATTATG+AGG | + | chr2_3:1687629-1687648 | None:intergenic | 35.0% |
| TCATTAGCGCTTGAATTCTT+AGG | - | chr2_3:1687696-1687715 | Msa0270440:intron | 35.0% | |
| TATGTTCCCAATAGACTTTG+TGG | - | chr2_3:1687745-1687764 | Msa0270440:intron | 35.0% | |
| TTCTTGACATTCCCTTTATG+TGG | - | chr2_3:1687938-1687957 | Msa0270440:intron | 35.0% | |
| AAAATGAAGCTGGAAACCAA+AGG | + | chr2_3:1687982-1688001 | None:intergenic | 35.0% | |
| ATACTTTCTTGTGTATGCCA+GGG | + | chr2_3:1688330-1688349 | None:intergenic | 35.0% | |
| AATACTTTCTTGTGTATGCC+AGG | + | chr2_3:1688331-1688350 | None:intergenic | 35.0% | |
| !! | ACAAGAAAGTATTGCTGTTC+AGG | - | chr2_3:1688338-1688357 | Msa0270440:CDS | 35.0% |
| !!! | CATATCAGCCATGTTTTTAG+CGG | + | chr2_3:1688377-1688396 | None:intergenic | 35.0% |
| AGTTCTCAGGTGAGTTAAAT+TGG | - | chr2_3:1688454-1688473 | Msa0270440:CDS | 35.0% | |
| AAGTTCTTTCTGTACCTCTT+GGG | + | chr2_3:1688613-1688632 | None:intergenic | 35.0% | |
| ACTTCGAAATATCCAACAAG+AGG | - | chr2_3:1688629-1688648 | Msa0270440:CDS | 35.0% | |
| !! | TTGGCATTGCCTTTTTCATT+TGG | + | chr2_3:1688758-1688777 | None:intergenic | 35.0% |
| CTTGCAGATCATCAAGAATT+AGG | + | chr2_3:1688802-1688821 | None:intergenic | 35.0% | |
| CATTGCCATGATTCTACAAA+AGG | + | chr2_3:1688879-1688898 | None:intergenic | 35.0% | |
| TAACAATCAACTAGAAACCG+AGG | + | chr2_3:1689029-1689048 | None:intergenic | 35.0% | |
| TGGATTTGCCATTGGAAATG+AGG | + | chr2_3:1686228-1686247 | None:intergenic | 40.0% | |
| CAATCCGATTCTCATTTCGA+AGG | - | chr2_3:1686311-1686330 | Msa0270440:three_prime_UTR | 40.0% | |
| GAAATTGAGAAGGAGGTGAT+CGG | + | chr2_3:1686397-1686416 | None:intergenic | 40.0% | |
| ! | TTAGGGTTTGGATTGGGATT+GGG | + | chr2_3:1686431-1686450 | None:intergenic | 40.0% |
| ! | ATTAGGGTTTGGATTGGGAT+TGG | + | chr2_3:1686432-1686451 | None:intergenic | 40.0% |
| GTAGGATTAGGGTTTGGATT+GGG | + | chr2_3:1686437-1686456 | None:intergenic | 40.0% | |
| AGTAGGATTAGGGTTTGGAT+TGG | + | chr2_3:1686438-1686457 | None:intergenic | 40.0% | |
| AAGGAGAAGGAGTAGGATTA+GGG | + | chr2_3:1686448-1686467 | None:intergenic | 40.0% | |
| TGGTTGGAACTTGGAAATCA+GGG | + | chr2_3:1686568-1686587 | None:intergenic | 40.0% | |
| !! | TTGGTGTTATCGGTGGATTT+GGG | + | chr2_3:1686596-1686615 | None:intergenic | 40.0% |
| !!! | GTTTTGATTATCAGAAGCGG+TGG | + | chr2_3:1686621-1686640 | None:intergenic | 40.0% |
| TTCGCTCTCAATTACTTCAC+TGG | - | chr2_3:1686701-1686720 | Msa0270440:CDS | 40.0% | |
| ACGAGAACATAGCACTTTCA+TGG | - | chr2_3:1686735-1686754 | Msa0270440:CDS | 40.0% | |
| CGAGAACATAGCACTTTCAT+GGG | - | chr2_3:1686736-1686755 | Msa0270440:CDS | 40.0% | |
| TGGCCTTCTTTCAACAACAA+AGG | + | chr2_3:1686842-1686861 | None:intergenic | 40.0% | |
| AGTGGAAGAAGATACTGTCA+AGG | - | chr2_3:1686884-1686903 | Msa0270440:intron | 40.0% | |
| GTGGAAGAAGATACTGTCAA+GGG | - | chr2_3:1686885-1686904 | Msa0270440:intron | 40.0% | |
| AAGATACTGTCAAGGGTTGT+TGG | - | chr2_3:1686892-1686911 | Msa0270440:intron | 40.0% | |
| AGCTGCTAAAGCTATGCATA+AGG | - | chr2_3:1687057-1687076 | Msa0270440:CDS | 40.0% | |
| AGGATTATAGGGATTTGCAG+AGG | - | chr2_3:1687077-1687096 | Msa0270440:CDS | 40.0% | |
| TTATGACTCCTCCTACTTCA+AGG | - | chr2_3:1687110-1687129 | Msa0270440:intron | 40.0% | |
| CTCAGAGCTTATTCAACAGT+CGG | + | chr2_3:1687332-1687351 | None:intergenic | 40.0% | |
| TTCCAACCTAGTAGTTGTCT+TGG | - | chr2_3:1687374-1687393 | Msa0270440:intron | 40.0% | |
| !! | TCCAACATTTTGGGGATGTT+TGG | - | chr2_3:1687529-1687548 | Msa0270440:intron | 40.0% |
| !! | CCAACATTTTGGGGATGTTT+GGG | - | chr2_3:1687530-1687549 | Msa0270440:intron | 40.0% |
| CATCCACCACAAAGTCTATT+GGG | + | chr2_3:1687754-1687773 | None:intergenic | 40.0% | |
| GACTTGTCCATGAGTATGAT+AGG | + | chr2_3:1687845-1687864 | None:intergenic | 40.0% | |
| TTTGGGAGAATCTCGAAGTA+CGG | + | chr2_3:1687873-1687892 | None:intergenic | 40.0% | |
| ! | GTGAAGTTTGAAGTTCGTTG+TGG | - | chr2_3:1688143-1688162 | Msa0270440:intron | 40.0% |
| CATAATACATAATCCAGGCC+CGG | - | chr2_3:1688556-1688575 | Msa0270440:CDS | 40.0% | |
| GAAGTTCTTTCTGTACCTCT+TGG | + | chr2_3:1688614-1688633 | None:intergenic | 40.0% | |
| ! | AGAGAGGAAAAAGATGATGG+AGG | - | chr2_3:1688671-1688690 | Msa0270440:CDS | 40.0% |
| TCATCAAGAATTAGGCACCA+CGG | + | chr2_3:1688794-1688813 | None:intergenic | 40.0% | |
| CCATGATTCTACAAAAGGCA+AGG | + | chr2_3:1688874-1688893 | None:intergenic | 40.0% | |
| ! | CCTTGCCTTTTGTAGAATCA+TGG | - | chr2_3:1688871-1688890 | Msa0270440:CDS | 40.0% |
| TGCATAGTGAAAGTGAAGCG+AGG | + | chr2_3:1686274-1686293 | None:intergenic | 45.0% | |
| GAATTCACCGTCATCGTCTT+CGG | + | chr2_3:1686345-1686364 | None:intergenic | 45.0% | |
| GTGGAGAGAAATTGAGAAGG+AGG | + | chr2_3:1686404-1686423 | None:intergenic | 45.0% | |
| TCGGTGGAGAGAAATTGAGA+AGG | + | chr2_3:1686407-1686426 | None:intergenic | 45.0% | |
| ! | GTTTGGATTGGGATTGGGAT+CGG | + | chr2_3:1686426-1686445 | None:intergenic | 45.0% |
| GAAGGAGTAGGATTAGGGTT+TGG | + | chr2_3:1686443-1686462 | None:intergenic | 45.0% | |
| GAAGGAGAAGGAGTAGGATT+AGG | + | chr2_3:1686449-1686468 | None:intergenic | 45.0% | |
| ! | AGGAGTGGATTTGGGAAGAT+CGG | + | chr2_3:1686480-1686499 | None:intergenic | 45.0% |
| ! | GTTGAAGGAGGAGTGGATTT+GGG | + | chr2_3:1686488-1686507 | None:intergenic | 45.0% |
| ! | AAATCGAAGGTGGTGGTTGA+AGG | + | chr2_3:1686503-1686522 | None:intergenic | 45.0% |
| AACCACCACCTTCGATTTCT+GGG | - | chr2_3:1686505-1686524 | Msa0270440:three_prime_UTR | 45.0% | |
| AAATCAGGGTGTGGTTGAGT+GGG | + | chr2_3:1686554-1686573 | None:intergenic | 45.0% | |
| GTGGTTGGAACTTGGAAATC+AGG | + | chr2_3:1686569-1686588 | None:intergenic | 45.0% | |
| ! | GTTATCGGTGGATTTGGGAT+CGG | + | chr2_3:1686591-1686610 | None:intergenic | 45.0% |
| !! | GTTGGTGTTATCGGTGGATT+TGG | + | chr2_3:1686597-1686616 | None:intergenic | 45.0% |
| ATTATCAGAAGCGGTGGTGT+TGG | + | chr2_3:1686615-1686634 | None:intergenic | 45.0% | |
| TTCACCGTTGAGATCCTTTG+CGG | - | chr2_3:1686662-1686681 | Msa0270440:CDS | 45.0% | |
| ACTACCGCAAAGGATCTCAA+CGG | + | chr2_3:1686669-1686688 | None:intergenic | 45.0% | |
| TCAAGGGTTGTTGGCAACTA+TGG | - | chr2_3:1686901-1686920 | Msa0270440:intron | 45.0% | |
| TCCTCCTACTTCAAGGAAGT+GGG | - | chr2_3:1687117-1687136 | Msa0270440:intron | 45.0% | |
| GAAACCCACTTCCTTGAAGT+AGG | + | chr2_3:1687124-1687143 | None:intergenic | 45.0% | |
| AGCCAAGACAACTACTAGGT+TGG | + | chr2_3:1687379-1687398 | None:intergenic | 45.0% | |
| CCCAAACATCCCCAAAATGT+TGG | + | chr2_3:1687533-1687552 | None:intergenic | 45.0% | |
| !! | ACCTAGCCTTATCCACTAAG+TGG | - | chr2_3:1687580-1687599 | Msa0270440:intron | 45.0% |
| !! | CCTAGCCTTATCCACTAAGT+GGG | - | chr2_3:1687581-1687600 | Msa0270440:intron | 45.0% |
| CCTTATCCACTAAGTGGGAT+CGG | - | chr2_3:1687586-1687605 | Msa0270440:intron | 45.0% | |
| AGCGCTTAGCTGAAATGAGT+TGG | + | chr2_3:1687643-1687662 | None:intergenic | 45.0% | |
| GTTCCCAATAGACTTTGTGG+TGG | - | chr2_3:1687748-1687767 | Msa0270440:intron | 45.0% | |
| CCATCCACCACAAAGTCTAT+TGG | + | chr2_3:1687755-1687774 | None:intergenic | 45.0% | |
| ! | CCAATAGACTTTGTGGTGGA+TGG | - | chr2_3:1687752-1687771 | Msa0270440:intron | 45.0% |
| ! | TGGTGGATGGAAATCGAAGA+GGG | - | chr2_3:1687765-1687784 | Msa0270440:intron | 45.0% |
| TGGAAATCGAAGAGGGGATA+TGG | - | chr2_3:1687772-1687791 | Msa0270440:intron | 45.0% | |
| GGAAATCGAAGAGGGGATAT+GGG | - | chr2_3:1687773-1687792 | Msa0270440:intron | 45.0% | |
| GTTCGTTGTGGAAACTGTCT+TGG | - | chr2_3:1688155-1688174 | Msa0270440:CDS | 45.0% | |
| TCTTCCAGCCGCTAAAAACA+TGG | - | chr2_3:1688366-1688385 | Msa0270440:CDS | 45.0% | |
| TTCTTTGCATGGCCTCTTGT+TGG | + | chr2_3:1688644-1688663 | None:intergenic | 45.0% | |
| AGAGGCCATGCAAAGAAGAA+AGG | - | chr2_3:1688647-1688666 | Msa0270440:CDS | 45.0% | |
| CTCTGCCTTTCTTCTTTGCA+TGG | + | chr2_3:1688655-1688674 | None:intergenic | 45.0% | |
| TGCAAAGAAGAAAGGCAGAG+AGG | - | chr2_3:1688655-1688674 | Msa0270440:CDS | 45.0% | |
| GGCAGAGAGGAAAAAGATGA+TGG | - | chr2_3:1688668-1688687 | Msa0270440:CDS | 45.0% | |
| !! | GAGGAAAAAGATGATGGAGG+AGG | - | chr2_3:1688674-1688693 | Msa0270440:CDS | 45.0% |
| TCGTGCTCGCCAAATGAAAA+AGG | - | chr2_3:1688746-1688765 | Msa0270440:CDS | 45.0% | |
| ! | CCACGGGACATTTTCATTCT+TGG | + | chr2_3:1688777-1688796 | None:intergenic | 45.0% |
| CCAAGAATGAAAATGTCCCG+TGG | - | chr2_3:1688774-1688793 | Msa0270440:CDS | 45.0% | |
| CATCAAGAATTAGGCACCAC+GGG | + | chr2_3:1688793-1688812 | None:intergenic | 45.0% | |
| AACTACAACGTTCGTTGGGT+GGG | + | chr2_3:1688847-1688866 | None:intergenic | 45.0% | |
| ACCCAACGAACGTTGTAGTT+GGG | - | chr2_3:1688847-1688866 | Msa0270440:CDS | 45.0% | |
| ACCCAACTACAACGTTCGTT+GGG | + | chr2_3:1688851-1688870 | None:intergenic | 45.0% | |
| GTCTATCTAGCTAACATGGG+AGG | + | chr2_3:1688922-1688941 | None:intergenic | 45.0% | |
| CGCGTCTATCTAGCTAACAT+GGG | + | chr2_3:1688925-1688944 | None:intergenic | 45.0% | |
| TCGCGTCTATCTAGCTAACA+TGG | + | chr2_3:1688926-1688945 | None:intergenic | 45.0% | |
| ! | AGATAGACGCGACCACATTT+TGG | - | chr2_3:1688934-1688953 | Msa0270440:CDS | 45.0% |
| TTCGAAGCCGAAGACGATGA+CGG | - | chr2_3:1686335-1686354 | Msa0270440:three_prime_UTR | 50.0% | |
| AGAGAAGCTGGATCGATGGA+AGG | + | chr2_3:1686374-1686393 | None:intergenic | 50.0% | |
| GTGGATTTGGGAAGATCGGA+GGG | + | chr2_3:1686476-1686495 | None:intergenic | 50.0% | |
| ! | AGTGGATTTGGGAAGATCGG+AGG | + | chr2_3:1686477-1686496 | None:intergenic | 50.0% |
| ! | GGTTGAAGGAGGAGTGGATT+TGG | + | chr2_3:1686489-1686508 | None:intergenic | 50.0% |
| CAACCACCACCTTCGATTTC+TGG | - | chr2_3:1686504-1686523 | Msa0270440:three_prime_UTR | 50.0% | |
| ATCGTCGTCCCAGAAATCGA+AGG | + | chr2_3:1686516-1686535 | None:intergenic | 50.0% | |
| TGGGACGACGATGAATTCGA+AGG | - | chr2_3:1686524-1686543 | Msa0270440:three_prime_UTR | 50.0% | |
| GAAATCAGGGTGTGGTTGAG+TGG | + | chr2_3:1686555-1686574 | None:intergenic | 50.0% | |
| GGAACTTGGAAATCAGGGTG+TGG | + | chr2_3:1686563-1686582 | None:intergenic | 50.0% | |
| !! | AGCGGTGGTGTTGGTGTTAT+CGG | + | chr2_3:1686606-1686625 | None:intergenic | 50.0% |
| ATCTCAACGGTGAAGGAACG+TGG | + | chr2_3:1686656-1686675 | None:intergenic | 50.0% | |
| GCAAAGGATCTCAACGGTGA+AGG | + | chr2_3:1686663-1686682 | None:intergenic | 50.0% | |
| !! | AGTCTTTTAGGGATCGGCGA+TGG | - | chr2_3:1686803-1686822 | Msa0270440:intron | 50.0% |
| CTCCTCCTACTTCAAGGAAG+TGG | - | chr2_3:1687116-1687135 | Msa0270440:intron | 50.0% | |
| ACCCACTTCCTTGAAGTAGG+AGG | + | chr2_3:1687121-1687140 | None:intergenic | 50.0% | |
| CACTGATGCACTCATTGACC+AGG | - | chr2_3:1687195-1687214 | Msa0270440:intron | 50.0% | |
| ! | CCCACTTAGTGGATAAGGCT+AGG | + | chr2_3:1687584-1687603 | None:intergenic | 50.0% |
| ! | CCGATCCCACTTAGTGGATA+AGG | + | chr2_3:1687589-1687608 | None:intergenic | 50.0% |
| ATGTAGCCGATCCCACTTAG+TGG | + | chr2_3:1687595-1687614 | None:intergenic | 50.0% | |
| ACTAAGTGGGATCGGCTACA+TGG | - | chr2_3:1687594-1687613 | Msa0270440:intron | 50.0% | |
| !! | GTGGTGGATGGAAATCGAAG+AGG | - | chr2_3:1687764-1687783 | Msa0270440:intron | 50.0% |
| GGTGGATGGAAATCGAAGAG+GGG | - | chr2_3:1687766-1687785 | Msa0270440:intron | 50.0% | |
| GAGGGAGCCTATCATACTCA+TGG | - | chr2_3:1687835-1687854 | Msa0270440:intron | 50.0% | |
| CATTTCTCCGACAATCACCC+TGG | - | chr2_3:1688310-1688329 | Msa0270440:CDS | 50.0% | |
| GTGTATGCCAGGGTGATTGT+CGG | + | chr2_3:1688320-1688339 | None:intergenic | 50.0% | |
| !!! | TCAGCCATGTTTTTAGCGGC+TGG | + | chr2_3:1688373-1688392 | None:intergenic | 50.0% |
| CATGGCTGATATGACTCGAC+TGG | - | chr2_3:1688384-1688403 | Msa0270440:CDS | 50.0% | |
| ! | GTACCTCTTGGGCAACCTTT+TGG | + | chr2_3:1688602-1688621 | None:intergenic | 50.0% |
| !! | AAAGATGATGGAGGAGGCTG+AGG | - | chr2_3:1688680-1688699 | Msa0270440:CDS | 50.0% |
| ACTACAACGTTCGTTGGGTG+GGG | + | chr2_3:1688846-1688865 | None:intergenic | 50.0% | |
| CAACTACAACGTTCGTTGGG+TGG | + | chr2_3:1688848-1688867 | None:intergenic | 50.0% | |
| CACCCAACGAACGTTGTAGT+TGG | - | chr2_3:1688846-1688865 | Msa0270440:CDS | 50.0% | |
| GACCCAACTACAACGTTCGT+TGG | + | chr2_3:1688852-1688871 | None:intergenic | 50.0% | |
| ! | TAGACGCGACCACATTTTGG+TGG | - | chr2_3:1688937-1688956 | Msa0270440:CDS | 50.0% |
| ! | ACCACATGTCAGAGCTTGCT+AGG | + | chr2_3:1689145-1689164 | None:intergenic | 50.0% |
| TCGGAGAGAAGCTGGATCGA+TGG | + | chr2_3:1686378-1686397 | None:intergenic | 55.0% | |
| ! | TGGATTGGGATTGGGATCGG+TGG | + | chr2_3:1686423-1686442 | None:intergenic | 55.0% |
| GGTGGAGAAGGAGAAGGAGT+AGG | + | chr2_3:1686455-1686474 | None:intergenic | 55.0% | |
| GATTTGGGAAGATCGGAGGG+TGG | + | chr2_3:1686473-1686492 | None:intergenic | 55.0% | |
| ! | TCGAAGGTGGTGGTTGAAGG+AGG | + | chr2_3:1686500-1686519 | None:intergenic | 55.0% |
| GTCCCAGAAATCGAAGGTGG+TGG | + | chr2_3:1686510-1686529 | None:intergenic | 55.0% | |
| GTCGTCCCAGAAATCGAAGG+TGG | + | chr2_3:1686513-1686532 | None:intergenic | 55.0% | |
| TGGGATCGGTGGTTGGAACT+TGG | + | chr2_3:1686577-1686596 | None:intergenic | 55.0% | |
| ! | GTGGATTTGGGATCGGTGGT+TGG | + | chr2_3:1686584-1686603 | None:intergenic | 55.0% |
| ! | ATCGGTGGATTTGGGATCGG+TGG | + | chr2_3:1686588-1686607 | None:intergenic | 55.0% |
| !! | GGTGGTGTTGGTGTTATCGG+TGG | + | chr2_3:1686603-1686622 | None:intergenic | 55.0% |
| ACGGTGAAGGAACGTGGTTG+AGG | + | chr2_3:1686650-1686669 | None:intergenic | 55.0% | |
| !! | CTTTTAGGGATCGGCGATGG+CGG | - | chr2_3:1686806-1686825 | Msa0270440:intron | 55.0% |
| !! | TTTTAGGGATCGGCGATGGC+GGG | - | chr2_3:1686807-1686826 | Msa0270440:intron | 55.0% |
| GGCTGATATGACTCGACTGG+TGG | - | chr2_3:1688387-1688406 | Msa0270440:CDS | 55.0% | |
| TGCAGCCTCTGTCTTAGACC+GGG | + | chr2_3:1688577-1688596 | None:intergenic | 55.0% | |
| GTGCAGCCTCTGTCTTAGAC+CGG | + | chr2_3:1688578-1688597 | None:intergenic | 55.0% | |
| ACGCCAAAAGGTTGCCCAAG+AGG | - | chr2_3:1688596-1688615 | Msa0270440:CDS | 55.0% | |
| !! | TGAGGCAAAGCTTGGTGCAG+AGG | - | chr2_3:1688698-1688717 | Msa0270440:CDS | 55.0% |
| TACAACGTTCGTTGGGTGGG+GGG | + | chr2_3:1688844-1688863 | None:intergenic | 55.0% | |
| CTACAACGTTCGTTGGGTGG+GGG | + | chr2_3:1688845-1688864 | None:intergenic | 55.0% | |
| ! | GCCTAGCAAGCTCTGACATG+TGG | - | chr2_3:1689141-1689160 | Msa0270440:five_prime_UTR | 55.0% |
| GGAGGTGATCGGAGAGAAGC+TGG | + | chr2_3:1686386-1686405 | None:intergenic | 60.0% | |
| TCGGAGGGTGGAGAAGGAGA+AGG | + | chr2_3:1686461-1686480 | None:intergenic | 60.0% | |
| GGAAGATCGGAGGGTGGAGA+AGG | + | chr2_3:1686467-1686486 | None:intergenic | 60.0% | |
| ! | GGTGGTGGTTGAAGGAGGAG+TGG | + | chr2_3:1686495-1686514 | None:intergenic | 60.0% |
| TTTAGGGATCGGCGATGGCG+GGG | - | chr2_3:1686808-1686827 | Msa0270440:intron | 60.0% | |
| GACAGAGGCTGCACGCCAAA+AGG | - | chr2_3:1688584-1688603 | Msa0270440:CDS | 60.0% | |
| GAGGAGGCTGAGGCAAAGCT+TGG | - | chr2_3:1688690-1688709 | Msa0270440:CDS | 60.0% | |
| ACAACGTTCGTTGGGTGGGG+GGG | + | chr2_3:1688843-1688862 | None:intergenic | 60.0% | |
| CCTCTGTCTTAGACCGGGCC+TGG | + | chr2_3:1688572-1688591 | None:intergenic | 65.0% | |
| ! | CCAGGCCCGGTCTAAGACAG+AGG | - | chr2_3:1688569-1688588 | Msa0270440:CDS | 65.0% |
| CGTTCGTTGGGTGGGGGGGA+TGG | + | chr2_3:1688839-1688858 | None:intergenic | 70.0% |
| Chromosome | Type | Strat | End | Strand | Name |
|---|---|---|---|---|---|
| chr2_3 | gene | 1686148 | 1689221 | 1686148 | ID=Msa0270440;Name=Msa0270440 |
| chr2_3 | mRNA | 1686148 | 1689221 | 1686148 | ID=Msa0270440-mRNA-1;Parent=Msa0270440;Name=Msa0270440-mRNA-1;_AED=0.03;_eAED=0.03;_QI=88|1|1|1|1|1|3|418|471 |
| chr2_3 | exon | 1686148 | 1686796 | 1686148 | ID=Msa0270440-mRNA-1:exon:768;Parent=Msa0270440-mRNA-1 |
| chr2_3 | exon | 1686907 | 1687110 | 1686907 | ID=Msa0270440-mRNA-1:exon:767;Parent=Msa0270440-mRNA-1 |
| chr2_3 | exon | 1688153 | 1689221 | 1688153 | ID=Msa0270440-mRNA-1:exon:766;Parent=Msa0270440-mRNA-1 |
| chr2_3 | five_prime_UTR | 1689134 | 1689221 | 1689134 | ID=Msa0270440-mRNA-1:five_prime_utr;Parent=Msa0270440-mRNA-1 |
| chr2_3 | CDS | 1688153 | 1689133 | 1688153 | ID=Msa0270440-mRNA-1:cds;Parent=Msa0270440-mRNA-1 |
| chr2_3 | CDS | 1686907 | 1687110 | 1686907 | ID=Msa0270440-mRNA-1:cds;Parent=Msa0270440-mRNA-1 |
| chr2_3 | CDS | 1686566 | 1686796 | 1686566 | ID=Msa0270440-mRNA-1:cds;Parent=Msa0270440-mRNA-1 |
| chr2_3 | three_prime_UTR | 1686148 | 1686565 | 1686148 | ID=Msa0270440-mRNA-1:three_prime_utr;Parent=Msa0270440-mRNA-1 |
| Gene Sequence |
| Protein sequence |
