AlfalfaGEDB Alfalfa Gene Editing Database

M. sativa cultivar zhongmu-4 / Msa0267710


Query id Subject id identity % alignment length mismatches gap openings q. start q. end s. start s. end e-value bit score
Msa0267710 MtrunA17_Chr7g0240451 89.744 117 4 1 104 212 1 117 1.83e-70 210
Msa0267710 MtrunA17_Chr7g0240451 85.417 96 12 1 1 94 1 96 6.43e-52 163
Msa0267710 MtrunA17_Chr7g0240471 82.051 117 13 1 104 212 1 117 3.73e-64 194
Msa0267710 MtrunA17_Chr7g0240471 88.542 96 9 1 1 94 1 96 2.21e-54 169
Msa0267710 MtrunA17_Chr7g0240441 81.159 69 5 1 139 207 29 89 3.55e-33 114
Msa0267710 MtrunA17_Chr7g0240441 65.574 61 5 1 34 94 29 73 1.16e-16 72.0
Msa0267710 MtrunA17_Chr8g0368861 42.149 121 57 3 104 212 1 120 4.42e-20 82.0
Msa0267710 MtrunA17_Chr8g0368831 41.322 121 58 3 104 212 9 128 1.99e-19 80.5
Query id Subject id identity % alignment length mismatches gap openings q. start q. end s. start s. end e-value bit score
Msa0267710 AT3G53980.2 61.053 95 28 2 126 212 21 114 1.46e-35 122
Msa0267710 AT3G53980.2 62.319 69 25 1 26 94 26 93 1.38e-23 91.3
Msa0267710 AT3G53980.1 61.053 95 28 2 126 212 21 114 1.46e-35 122
Msa0267710 AT3G53980.1 62.319 69 25 1 26 94 26 93 1.38e-23 91.3
Msa0267710 AT5G05960.1 56.757 111 33 3 110 212 13 116 2.52e-35 121
Msa0267710 AT5G05960.1 48.352 91 42 2 4 94 10 95 2.03e-22 88.2
Msa0267710 AT2G37870.1 46.429 112 46 5 113 212 6 115 5.02e-21 84.7

Find 47 sgRNAs with CRISPR-Local

Find 346 sgRNAs with CRISPR-GE


CRISPR-Local

CRISPR-Local
sgRNA_sequence on_target_score Position Region
AGCTTAAATGCTTCCATATC+TGG 0.265044 2_2:+69456807 None:intergenic
GTTGCTGTTAGCTGCTATTA+TGG 0.326649 2_2:-69451356 Msa0267710:three_prime_UTR
GGTATTGCAGTTCTTGTTGC+AGG 0.361788 2_2:-69452053 Msa0267710:CDS
GGTATTGCAGTTCTTGTTGC+AGG 0.361788 2_2:-69456876 Msa0267710:CDS
GGGTTACTATTTAATATAGT+TGG 0.381173 2_2:-69451167 Msa0267710:three_prime_UTR
CAACAACCTCAACTCTTTCA+AGG 0.398597 2_2:+69451409 None:intergenic
CAACAACCTCAACTCTTTCA+AGG 0.398597 2_2:+69456221 None:intergenic
AGCTTAAAAGCTTCATTGTC+TGG 0.411064 2_2:+69451984 None:intergenic
ACTATTTAATATAGTTGGTA+TGG 0.424897 2_2:-69451162 Msa0267710:three_prime_UTR
TCAAACGTTGCTAAAATGTC+TGG 0.431901 2_2:-69451849 Msa0267710:CDS
TCAAACGTTGCTAAAATGTC+TGG 0.462464 2_2:-69456672 Msa0267710:CDS
CAGCAAGGTTGCAACGCTTA+GGG 0.465106 2_2:+69451799 None:intergenic
AAGGGGTACTACACCAGATA+TGG 0.470603 2_2:-69456820 Msa0267710:CDS
GGATAGTAACAGCAATTTGA+GGG 0.472152 2_2:+69451820 None:intergenic
GGATAGTAACAGCAATTTGA+GGG 0.472152 2_2:+69456643 None:intergenic
TTGCTGAAAACAAAGATAAG+AGG 0.488652 2_2:-69451389 Msa0267710:three_prime_UTR
TCAGCAAGGTTGCAACGCTT+AGG 0.488806 2_2:+69451798 None:intergenic
GTGAAATTGTTGTGCTTCGT+TGG 0.500117 2_2:-69452074 Msa0267710:CDS
GGGATAGTAACAGCAATTTG+AGG 0.508534 2_2:+69451819 None:intergenic
GGGATAGTAACAGCAATTTG+AGG 0.508534 2_2:+69456642 None:intergenic
CGAGGCAAAACAATTTCATA+AGG 0.511907 2_2:+69456901 None:intergenic
GTTGAAAGTGCAGGTGAATG+TGG 0.515102 2_2:-69456843 Msa0267710:intron
CGTCCACACTTGTAACCGAC+AGG 0.520932 2_2:+69451771 None:intergenic
CGCCCTGTCGGTTACAAGTG+TGG 0.534054 2_2:-69451774 Msa0267710:CDS
GTTGAAAGTGCTGGTGAATG+TGG 0.539242 2_2:-69452020 Msa0267710:CDS
TAACTTTACTGTTTATAGTG+TGG 0.540728 2_2:-69451306 Msa0267710:three_prime_UTR
TCTTGTGCTGCACTTGCACA+AGG 0.541464 2_2:+69456780 None:intergenic
AAAGTGCTGGTGAATGTGGA+AGG 0.549386 2_2:-69452016 Msa0267710:CDS
AAAGTGCAGGTGAATGTGGA+AGG 0.549386 2_2:-69456839 Msa0267710:intron
AACCTTGCTGATCGCCCTGT+CGG 0.551684 2_2:-69451786 Msa0267710:CDS
ATTCATAGAGTTGAAAGTGC+TGG 0.554882 2_2:-69452029 Msa0267710:CDS
ACTCTTCCTTGAAAGAGTTG+AGG 0.566469 2_2:-69451415 Msa0267710:exon
ACTCTTCCTTGAAAGAGTTG+AGG 0.566469 2_2:-69456227 Msa0267710:intron
TGTGATCAGACTAAGAAACT+TGG 0.574065 2_2:-69456729 Msa0267710:CDS
TGCTGAAAACAAAGATAAGA+GGG 0.575968 2_2:-69451388 Msa0267710:three_prime_UTR
AAAACTGCACAAAGACAACT+TGG 0.590774 2_2:+69456699 None:intergenic
ATAACAGCACAAAGACAACT+TGG 0.604458 2_2:+69451876 None:intergenic
TGTGCTCAGGTTAAGAAACT+CGG 0.610168 2_2:-69451906 Msa0267710:intron
TTTATTCAGGGTGTTCACAA+AGG 0.622018 2_2:+69451267 None:intergenic
AGTGCTGGTGAATGTGGAAG+GGG 0.630405 2_2:-69452014 Msa0267710:CDS
AGTGCAGGTGAATGTGGAAG+GGG 0.630405 2_2:-69456837 Msa0267710:intron
AACCGACAGGGCGATCAGCA+AGG 0.631783 2_2:+69451784 None:intergenic
AAGTGCTGGTGAATGTGGAA+GGG 0.641454 2_2:-69452015 Msa0267710:CDS
AAGTGCAGGTGAATGTGGAA+GGG 0.641454 2_2:-69456838 Msa0267710:intron
AATACAACACAACTAAGCTG+TGG 0.678775 2_2:+69451330 None:intergenic
GTCCACACTTGTAACCGACA+GGG 0.709589 2_2:+69451772 None:intergenic
CAAGAACTGCAATACCAACG+AGG 0.744882 2_2:+69456883 None:intergenic

CRISPR-GE

badsite warning sgRNA_sequence Strand Position Region GC_content
!!! AAATAACTTTTATATGAAAA+CGG + chr2_2:69451536-69451555 None:intergenic 10.0%
!!! TTTAATTTAACATTATTGAT+AGG - chr2_2:69451584-69451603 Msa0267710:intron 10.0%
!!! TTTTAACAATAAATTTTCTT+AGG + chr2_2:69451661-69451680 None:intergenic 10.0%
!!! CATAATTTTGATAAATATTA+TGG + chr2_2:69454008-69454027 None:intergenic 10.0%
!!! TTTTTTTTTCTTTCTTTTAA+TGG - chr2_2:69454165-69454184 Msa0267710:intron 10.0%
!!! ATTTAGATATATTTTGAAAA+GGG - chr2_2:69454525-69454544 Msa0267710:intron 10.0%
!! AAATTTCCAAAATATAAATT+TGG - chr2_2:69454564-69454583 Msa0267710:intron 10.0%
!!! ATATTTCCAAATTTATATTT+TGG + chr2_2:69454573-69454592 None:intergenic 10.0%
!! TAAATTTGGAAATATAAATT+TGG - chr2_2:69454578-69454597 Msa0267710:intron 10.0%
!! ATATATTAAGAAGAAAAAAA+TGG - chr2_2:69455962-69455981 Msa0267710:intron 10.0%
!!! TAATTATTTATCTTTTTTCT+TGG - chr2_2:69456576-69456595 Msa0267710:intron 10.0%
!!! GTTTTCATATAAAAGTTATT+TGG - chr2_2:69451535-69451554 Msa0267710:intron 15.0%
!!! AGCTTTTAATAAATAATTGT+TGG - chr2_2:69452375-69452394 Msa0267710:intron 15.0%
!! TCAATTTGTAATATATGTAA+GGG + chr2_2:69452466-69452485 None:intergenic 15.0%
!! TCTTAATAATCCTAATTATT+TGG + chr2_2:69453653-69453672 None:intergenic 15.0%
!! TAAATGAATGTTAAGATATT+TGG + chr2_2:69453867-69453886 None:intergenic 15.0%
!! AAAGAGATAAAAAAAAAATG+AGG + chr2_2:69453893-69453912 None:intergenic 15.0%
!!! GATTTAGATATATTTTGAAA+AGG - chr2_2:69454524-69454543 Msa0267710:intron 15.0%
!!! CAATGATTTAGTATTATTTT+TGG + chr2_2:69454818-69454837 None:intergenic 15.0%
!!! TCCTTTTATATAGATTTATT+GGG - chr2_2:69455153-69455172 Msa0267710:intron 15.0%
!! AAATAAATTACGATCAAAAT+AGG - chr2_2:69455497-69455516 Msa0267710:intron 15.0%
!! AATAAATTACGATCAAAATA+GGG - chr2_2:69455498-69455517 Msa0267710:intron 15.0%
!!! ATTTTATAGTACTAAATATG+TGG + chr2_2:69455891-69455910 None:intergenic 15.0%
!!! TACTTATTTGACATTTTTTT+AGG + chr2_2:69456538-69456557 None:intergenic 15.0%
!! AATGAGATTATAGATAGTTA+AGG - chr2_2:69451610-69451629 Msa0267710:intron 20.0%
!! ATGAGATTATAGATAGTTAA+GGG - chr2_2:69451611-69451630 Msa0267710:intron 20.0%
!! TTAAAGTAGTAACTTTGATT+TGG - chr2_2:69452325-69452344 Msa0267710:intron 20.0%
!! GTCAATTTGTAATATATGTA+AGG + chr2_2:69452467-69452486 None:intergenic 20.0%
!! TGAGTATACAAACATTATAT+CGG - chr2_2:69452490-69452509 Msa0267710:intron 20.0%
!! AATCAAAAACAACATAACAA+TGG + chr2_2:69452645-69452664 None:intergenic 20.0%
!!! ATTGTTATGTTGTTTTTGAT+TGG - chr2_2:69452644-69452663 Msa0267710:intron 20.0%
!!! TTGTTATGTTGTTTTTGATT+GGG - chr2_2:69452645-69452664 Msa0267710:intron 20.0%
!!! TTTGGGTTGTTTTTTATTTT+GGG - chr2_2:69452679-69452698 Msa0267710:intron 20.0%
!!! TATCACTAAAATGTTTTAGT+AGG + chr2_2:69452800-69452819 None:intergenic 20.0%
!!! AGTATTTTTAGAATTTGAGA+TGG + chr2_2:69452875-69452894 None:intergenic 20.0%
!!! TAAATTGTTTTAGAACCTTA+AGG - chr2_2:69452958-69452977 Msa0267710:intron 20.0%
!!! GTTTTATTAGTCAATTTTCA+AGG - chr2_2:69453498-69453517 Msa0267710:intron 20.0%
!! CATTTATTCTAATGAATAGT+TGG - chr2_2:69454390-69454409 Msa0267710:intron 20.0%
!! CAATAAATCTATATAAAAGG+AGG + chr2_2:69455154-69455173 None:intergenic 20.0%
!!! CTCCTTTTATATAGATTTAT+TGG - chr2_2:69455152-69455171 Msa0267710:intron 20.0%
!!! CCTTTTATATAGATTTATTG+GGG - chr2_2:69455154-69455173 Msa0267710:intron 20.0%
!!! ATTCTATTTAACTTGTGAAT+TGG + chr2_2:69455454-69455473 None:intergenic 20.0%
!!! TTGTGTCTTTTATTACTAAT+TGG - chr2_2:69455789-69455808 Msa0267710:intron 20.0%
!! TATTAAGAAGAAAAAAATGG+AGG - chr2_2:69455965-69455984 Msa0267710:intron 20.0%
!! ATTAAGAAGAAAAAAATGGA+GGG - chr2_2:69455966-69455985 Msa0267710:intron 20.0%
!! ATAATACTCTTGACTATTTA+TGG + chr2_2:69456418-69456437 None:intergenic 20.0%
!!! AAATGAAACTGTTTTATTCA+GGG + chr2_2:69456815-69456834 None:intergenic 20.0%
!!! AAAATGAAACTGTTTTATTC+AGG + chr2_2:69456816-69456835 None:intergenic 20.0%
!!! GATGCTTTTACATTATATTT+GGG - chr2_2:69456875-69456894 Msa0267710:CDS 20.0%
!!! TTTTACATTATATTTGGGTT+GGG - chr2_2:69456880-69456899 Msa0267710:CDS 20.0%
!!! ACTATTTAATATAGTTGGTA+TGG - chr2_2:69456905-69456924 Msa0267710:CDS 20.0%
!!! TAGATAGTTAAGGGTATTAT+AGG - chr2_2:69451620-69451639 Msa0267710:intron 25.0%
!!! AGATAGTTAAGGGTATTATA+GGG - chr2_2:69451621-69451640 Msa0267710:intron 25.0%
! TTGTTAAAATCTTCCCTTTA+TGG - chr2_2:69451672-69451691 Msa0267710:intron 25.0%
!! CTATTTGTCAATTTTCTTGA+TGG - chr2_2:69451771-69451790 Msa0267710:intron 25.0%
! TTGCTGAAAACAAACATAAA+TGG - chr2_2:69451866-69451885 Msa0267710:CDS 25.0%
! TGCTGAAAACAAACATAAAT+GGG - chr2_2:69451867-69451886 Msa0267710:CDS 25.0%
!! TTTCTTGTTTGTTTATAGTG+TGG - chr2_2:69451953-69451972 Msa0267710:CDS 25.0%
!!! AGAGAATGTTTTATTCATGA+GGG + chr2_2:69452007-69452026 None:intergenic 25.0%
!!! AAGAGAATGTTTTATTCATG+AGG + chr2_2:69452008-69452027 None:intergenic 25.0%
! AATAAAACATTCTCTTTCTG+TGG - chr2_2:69452012-69452031 Msa0267710:CDS 25.0%
! AAAACTACTTACTTCGTAAT+CGG + chr2_2:69452150-69452169 None:intergenic 25.0%
! TTATTATTATACTGTTGGTC+AGG + chr2_2:69452226-69452245 None:intergenic 25.0%
!! ACGTGTTATTATTATACTGT+TGG + chr2_2:69452231-69452250 None:intergenic 25.0%
! TATACAAACATTATATCGGT+TGG - chr2_2:69452494-69452513 Msa0267710:intron 25.0%
!!! GTTTGGGTTGTTTTTTATTT+TGG - chr2_2:69452678-69452697 Msa0267710:intron 25.0%
!!! CTAAAACATTTTAGTGATAG+TGG - chr2_2:69452801-69452820 Msa0267710:intron 25.0%
! ATCTTTATCAAGAGTAGTAA+CGG + chr2_2:69452852-69452871 None:intergenic 25.0%
!! TGAATTTTGTTAAAGATGTG+AGG - chr2_2:69452902-69452921 Msa0267710:intron 25.0%
! AAAACTACTTACGTCATAAT+CGG + chr2_2:69452937-69452956 None:intergenic 25.0%
! TATGTTTATTTACGTACTAG+AGG + chr2_2:69453095-69453114 None:intergenic 25.0%
! TCTAGTACGTAAATAAACAT+AGG - chr2_2:69453094-69453113 Msa0267710:intron 25.0%
! AACTAAGATAAGAAATAGAG+TGG - chr2_2:69453131-69453150 Msa0267710:intron 25.0%
! AACATTGTGTGAAAATTTGT+CGG - chr2_2:69453254-69453273 Msa0267710:intron 25.0%
!!! TATGTACTTATGATTTTTGG+AGG + chr2_2:69453547-69453566 None:intergenic 25.0%
!! GTGTATGTACTTATGATTTT+TGG + chr2_2:69453550-69453569 None:intergenic 25.0%
!!! ATTTTGAGTAAATTCAGCAT+AGG + chr2_2:69453747-69453766 None:intergenic 25.0%
! AAACATTAAAAAGTAGACGA+TGG - chr2_2:69454085-69454104 Msa0267710:intron 25.0%
!! TAATGGACACATATATTTGT+TGG - chr2_2:69454182-69454201 Msa0267710:intron 25.0%
! ACTCTTAAATTCTCATGAAA+AGG - chr2_2:69454286-69454305 Msa0267710:intron 25.0%
!! TAGAAATGACATGTTTGTTA+AGG + chr2_2:69454327-69454346 None:intergenic 25.0%
!!! TAGATATATTTTGAAAAGGG+TGG - chr2_2:69454528-69454547 Msa0267710:intron 25.0%
!!! AGATATATTTTGAAAAGGGT+GGG - chr2_2:69454529-69454548 Msa0267710:intron 25.0%
!! AAATCATTGATCGATACTTT+TGG - chr2_2:69454829-69454848 Msa0267710:intron 25.0%
! CCCCAATAAATCTATATAAA+AGG + chr2_2:69455157-69455176 None:intergenic 25.0%
! ACTATAAACTTGATACTTGA+GGG + chr2_2:69455233-69455252 None:intergenic 25.0%
! AACTATAAACTTGATACTTG+AGG + chr2_2:69455234-69455253 None:intergenic 25.0%
! AAGTATCAAGTTTATAGTTG+TGG - chr2_2:69455235-69455254 Msa0267710:intron 25.0%
!!! TATTTAACTTGTGAATTGGA+TGG + chr2_2:69455450-69455469 None:intergenic 25.0%
! TAATCATTTGTTTGAAAACG+AGG - chr2_2:69455663-69455682 Msa0267710:intron 25.0%
!!! GTGTTTATTTTCATACTTGT+AGG + chr2_2:69455727-69455746 None:intergenic 25.0%
! TATAGTACTAAATATGTGGT+CGG + chr2_2:69455887-69455906 None:intergenic 25.0%
! TAACTTTACTGTTTATAGTG+TGG - chr2_2:69456761-69456780 Msa0267710:CDS 25.0%
!! GGATGCTTTTACATTATATT+TGG - chr2_2:69456874-69456893 Msa0267710:CDS 25.0%
!! CTTTTACATTATATTTGGGT+TGG - chr2_2:69456879-69456898 Msa0267710:CDS 25.0%
! GGGTTACTATTTAATATAGT+TGG - chr2_2:69456900-69456919 Msa0267710:CDS 25.0%
!! CTAGTTTCTAGTTCCATAAA+GGG + chr2_2:69451688-69451707 None:intergenic 30.0%
!! TCTAGTTTCTAGTTCCATAA+AGG + chr2_2:69451689-69451708 None:intergenic 30.0%
TGCCTAAGAAAAATGTGAAA+CGG - chr2_2:69451719-69451738 Msa0267710:intron 30.0%
! TACCGTTTCACATTTTTCTT+AGG + chr2_2:69451724-69451743 None:intergenic 30.0%
AATACAACACAACTAAGTTG+TGG + chr2_2:69451928-69451947 None:intergenic 30.0%
AACAAAACCTACTCGAAAAA+GGG + chr2_2:69452721-69452740 None:intergenic 30.0%
AAACAAAACCTACTCGAAAA+AGG + chr2_2:69452722-69452741 None:intergenic 30.0%
TAATTATGCTTCATAGAGTG+TGG - chr2_2:69453197-69453216 Msa0267710:intron 30.0%
!!! GACCACACTTTATTTTTGAA+GGG - chr2_2:69453219-69453238 Msa0267710:intron 30.0%
AACCCTTCAAAAATAAAGTG+TGG + chr2_2:69453224-69453243 None:intergenic 30.0%
GACCAATGAATATATAGTGA+TGG - chr2_2:69453394-69453413 Msa0267710:intron 30.0%
TGCCATCACTATATATTCAT+TGG + chr2_2:69453399-69453418 None:intergenic 30.0%
TCTCTATACACAAAAACACA+TGG - chr2_2:69453443-69453462 Msa0267710:intron 30.0%
CAACAACGAACCAAATAATT+AGG - chr2_2:69453640-69453659 Msa0267710:intron 30.0%
! TAAAGTTTAAGGTAGAGATG+TGG + chr2_2:69453686-69453705 None:intergenic 30.0%
CATCTCTACCTTAAACTTTA+AGG - chr2_2:69453686-69453705 Msa0267710:intron 30.0%
ATTCAGCACCTTAAAGTTTA+AGG + chr2_2:69453697-69453716 None:intergenic 30.0%
AAAAGTAACGAACACAATCT+TGG + chr2_2:69454061-69454080 None:intergenic 30.0%
CCAAGTACTATTATCTCATT+GGG + chr2_2:69454117-69454136 None:intergenic 30.0%
TCCAAGTACTATTATCTCAT+TGG + chr2_2:69454118-69454137 None:intergenic 30.0%
! TCTTATCCCTTTTCTTCTTA+TGG + chr2_2:69454141-69454160 None:intergenic 30.0%
TTGTTGGAATACATACTATG+AGG - chr2_2:69454198-69454217 Msa0267710:intron 30.0%
CTACCTATATGAAAATGAAG+TGG - chr2_2:69454236-69454255 Msa0267710:intron 30.0%
!! ATGCCACTTCATTTTCATAT+AGG + chr2_2:69454242-69454261 None:intergenic 30.0%
ATAACTCACACATGAAATCT+TGG + chr2_2:69454367-69454386 None:intergenic 30.0%
TGCTTGCATACTATTCTATT+TGG - chr2_2:69454418-69454437 Msa0267710:intron 30.0%
GCTTGCATACTATTCTATTT+GGG - chr2_2:69454419-69454438 Msa0267710:intron 30.0%
CTTGCATACTATTCTATTTG+GGG - chr2_2:69454420-69454439 Msa0267710:intron 30.0%
!! GATATATTTTGAAAAGGGTG+GGG - chr2_2:69454530-69454549 Msa0267710:intron 30.0%
!! ATATATTTTGAAAAGGGTGG+GGG - chr2_2:69454531-69454550 Msa0267710:intron 30.0%
ATAAATTTGGAAAGCTGCAT+TGG - chr2_2:69454591-69454610 Msa0267710:intron 30.0%
! ATAGAGAAGCTTATGTCTTT+TGG + chr2_2:69454723-69454742 None:intergenic 30.0%
GCTTCTCTATATAACTTTAG+AGG - chr2_2:69454733-69454752 Msa0267710:intron 30.0%
GATTCAATACTATCCTTAAG+AGG - chr2_2:69454876-69454895 Msa0267710:intron 30.0%
TGTGTGACAAACTAATCTTT+AGG + chr2_2:69454958-69454977 None:intergenic 30.0%
!! AAATTTGTTAGAACCTCTGT+CGG + chr2_2:69455043-69455062 None:intergenic 30.0%
! AATTTTAGACTAGACCTAGT+AGG - chr2_2:69455058-69455077 Msa0267710:intron 30.0%
AAGGTAGAAAGTGAATGAAT+AGG - chr2_2:69455115-69455134 Msa0267710:intron 30.0%
AGGTAGAAAGTGAATGAATA+GGG - chr2_2:69455116-69455135 Msa0267710:intron 30.0%
AGAAAAGGTTGAAAAATCCT+AGG + chr2_2:69455187-69455206 None:intergenic 30.0%
!! TTCAACCTTTTCTACTGATT+TGG - chr2_2:69455194-69455213 Msa0267710:intron 30.0%
!!! TCAACCTTTTCTACTGATTT+GGG - chr2_2:69455195-69455214 Msa0267710:intron 30.0%
GTTAATCATCTAACTGACTA+GGG + chr2_2:69455298-69455317 None:intergenic 30.0%
! TGCTTATGTAGACTCTATTT+TGG + chr2_2:69455524-69455543 None:intergenic 30.0%
TGTTCCTAAGCTTTCAAAAA+AGG - chr2_2:69455635-69455654 Msa0267710:intron 30.0%
!!! TTGACCTTTTTTGAAAGCTT+AGG + chr2_2:69455642-69455661 None:intergenic 30.0%
ACATACTGCAAAAGATTAGA+TGG - chr2_2:69455696-69455715 Msa0267710:intron 30.0%
TAGTCATCCACTTAGATTAA+TGG + chr2_2:69455862-69455881 None:intergenic 30.0%
TTGCTGAAAACAAAGATAAG+AGG - chr2_2:69456678-69456697 Msa0267710:CDS 30.0%
TGCTGAAAACAAAGATAAGA+GGG - chr2_2:69456679-69456698 Msa0267710:CDS 30.0%
!!! ATCCACTAAAAAGTTTTGGA+AGG + chr2_2:69456858-69456877 None:intergenic 30.0%
! AAGCATCCACTAAAAAGTTT+TGG + chr2_2:69456862-69456881 None:intergenic 30.0%
CGAGGCAAAACAATTTCATA+AGG + chr2_2:69451169-69451188 None:intergenic 35.0%
!! ATGAAATTGTTTTGCCTCGT+TGG - chr2_2:69451170-69451189 Msa0267710:three_prime_UTR 35.0%
! ATTCATAGAGTTGAAAGTGC+AGG - chr2_2:69451215-69451234 Msa0267710:three_prime_UTR 35.0%
AGCTTAAATGCTTCCATATC+TGG + chr2_2:69451263-69451282 None:intergenic 35.0%
TGTGATCAGACTAAGAAACT+TGG - chr2_2:69451338-69451357 Msa0267710:three_prime_UTR 35.0%
AAAACTGCACAAAGACAACT+TGG + chr2_2:69451371-69451390 None:intergenic 35.0%
TCAAACGTTGCTAAAATGTC+TGG - chr2_2:69451395-69451414 Msa0267710:three_prime_UTR 35.0%
GGATAGTAACAGCAATTTGA+GGG + chr2_2:69451427-69451446 None:intergenic 35.0%
TAAGTAACTAACAAGTCCCT+CGG - chr2_2:69451496-69451515 Msa0267710:intron 35.0%
GATGCTGTTAGCTACTATTA+TGG - chr2_2:69451899-69451918 Msa0267710:CDS 35.0%
TGTGGTTTATTTGATGCTCT+TGG - chr2_2:69452030-69452049 Msa0267710:CDS 35.0%
CAAATTCCGTTAAAGATGTG+AGG - chr2_2:69452115-69452134 Msa0267710:intron 35.0%
CAAGATCCTCACATCTTTAA+CGG + chr2_2:69452124-69452143 None:intergenic 35.0%
TAAACTGTCTTCGAACCTTA+AGG - chr2_2:69452171-69452190 Msa0267710:intron 35.0%
! AAACATTATATCGGTTGGAG+TGG - chr2_2:69452499-69452518 Msa0267710:intron 35.0%
!!! TATTTTTTGCTATCTGCCTG+TGG - chr2_2:69452577-69452596 Msa0267710:intron 35.0%
TAGAGAAGATTGTGTTCGTT+GGG + chr2_2:69453013-69453032 None:intergenic 35.0%
ATAGAGAAGATTGTGTTCGT+TGG + chr2_2:69453014-69453033 None:intergenic 35.0%
TACGTACTAGAGGAATGTTA+GGG + chr2_2:69453085-69453104 None:intergenic 35.0%
TTACGTACTAGAGGAATGTT+AGG + chr2_2:69453086-69453105 None:intergenic 35.0%
AGAAACATGTACAACACAGT+TGG + chr2_2:69453174-69453193 None:intergenic 35.0%
!!! GGACCACACTTTATTTTTGA+AGG - chr2_2:69453218-69453237 Msa0267710:intron 35.0%
!! TGAAAATTTGTCGGCTTTCA+TGG - chr2_2:69453263-69453282 Msa0267710:intron 35.0%
!!! ATTTTTAGCCACACTTTCAC+GGG + chr2_2:69453374-69453393 None:intergenic 35.0%
!!! CATTTTTAGCCACACTTTCA+CGG + chr2_2:69453375-69453394 None:intergenic 35.0%
TAAAACCAGCTGAGAATCAT+TGG + chr2_2:69453484-69453503 None:intergenic 35.0%
!! TTTTTGGAGGCAACAACTTT+TGG + chr2_2:69453534-69453553 None:intergenic 35.0%
!! ACTTTAAGGTGCTGAATATG+TGG - chr2_2:69453700-69453719 Msa0267710:intron 35.0%
TATCGTTCAAAGAGTCAAAG+TGG - chr2_2:69453967-69453986 Msa0267710:intron 35.0%
CCCAATGAGATAATAGTACT+TGG - chr2_2:69454114-69454133 Msa0267710:intron 35.0%
ACTTGGACCATAAGAAGAAA+AGG - chr2_2:69454131-69454150 Msa0267710:intron 35.0%
CTTGGACCATAAGAAGAAAA+GGG - chr2_2:69454132-69454151 Msa0267710:intron 35.0%
AAGCTCATGGTTTCAGATAA+TGG + chr2_2:69454492-69454511 None:intergenic 35.0%
!! ATCTGAAACCATGAGCTTTT+TGG - chr2_2:69454494-69454513 Msa0267710:intron 35.0%
CCATTATTCCAAAAAGCTCA+TGG + chr2_2:69454505-69454524 None:intergenic 35.0%
!!! CCATGAGCTTTTTGGAATAA+TGG - chr2_2:69454502-69454521 Msa0267710:intron 35.0%
CATTACATCCTTTCACTGAA+AGG + chr2_2:69454628-69454647 None:intergenic 35.0%
TGAATGTGAAAGTCACGTTA+AGG - chr2_2:69454854-69454873 Msa0267710:intron 35.0%
AATACTGGTGTATCCTCTTA+AGG + chr2_2:69454892-69454911 None:intergenic 35.0%
! TATTCCCTTTTGCATCTGAT+TGG - chr2_2:69454908-69454927 Msa0267710:intron 35.0%
TAAGCCAATCAGATGCAAAA+GGG + chr2_2:69454915-69454934 None:intergenic 35.0%
TTAAGCCAATCAGATGCAAA+AGG + chr2_2:69454916-69454935 None:intergenic 35.0%
!! TTGCATCTGATTGGCTTAAT+TGG - chr2_2:69454917-69454936 Msa0267710:intron 35.0%
!! ATCTGATTGGCTTAATTGGT+AGG - chr2_2:69454921-69454940 Msa0267710:intron 35.0%
!! TCTGATTGGCTTAATTGGTA+GGG - chr2_2:69454922-69454941 Msa0267710:intron 35.0%
!! AATTTGTTAGAACCTCTGTC+GGG + chr2_2:69455042-69455061 None:intergenic 35.0%
CTACCTTCTAAATACTCAGA+TGG + chr2_2:69455102-69455121 None:intergenic 35.0%
GAAAGTGAATGAATAGGGTT+TGG - chr2_2:69455121-69455140 Msa0267710:intron 35.0%
! TTTATTGGGGTTTGTTTCCT+AGG - chr2_2:69455167-69455186 Msa0267710:intron 35.0%
!!! CAACCTTTTCTACTGATTTG+GGG - chr2_2:69455196-69455215 Msa0267710:intron 35.0%
GGTTAATCATCTAACTGACT+AGG + chr2_2:69455299-69455318 None:intergenic 35.0%
ATTGTAGACTGAATGTGACT+TGG + chr2_2:69455402-69455421 None:intergenic 35.0%
ATTCTCACCTAGCTTGATAT+TGG - chr2_2:69455748-69455767 Msa0267710:intron 35.0%
ATGTTGTCCAATATCAAGCT+AGG + chr2_2:69455758-69455777 None:intergenic 35.0%
ATAAAATCCCACCTAATGCA+TGG - chr2_2:69455904-69455923 Msa0267710:intron 35.0%
TAAAATCCCACCTAATGCAT+GGG - chr2_2:69455905-69455924 Msa0267710:intron 35.0%
! ATTCATAGAGTTGAAAGTGC+TGG - chr2_2:69451215-69451234 Msa0267710:three_prime_UTR 35.0%
AGCTTAAAAGCTTCATTGTC+TGG + chr2_2:69456086-69456105 None:intergenic 35.0%
ATAACAGCACAAAGACAACT+TGG + chr2_2:69456194-69456213 None:intergenic 35.0%
TCAAACGTTGCTAAAATGTC+TGG - chr2_2:69451395-69451414 Msa0267710:three_prime_UTR 35.0%
GGATAGTAACAGCAATTTGA+GGG + chr2_2:69451427-69451446 None:intergenic 35.0%
AATACAACACAACTAAGCTG+TGG + chr2_2:69456740-69456759 None:intergenic 35.0%
! TTTATTCAGGGTGTTCACAA+AGG + chr2_2:69456803-69456822 None:intergenic 35.0%
! TGCCTTCCAAAACTTTTTAG+TGG - chr2_2:69456853-69456872 Msa0267710:intron 35.0%
GGGATAGTAACAGCAATTTG+AGG + chr2_2:69451428-69451447 None:intergenic 40.0%
TAGCAAAGTTGCAGCGTTTA+GGG + chr2_2:69451448-69451467 None:intergenic 40.0%
TTAGCAAAGTTGCAGCGTTT+AGG + chr2_2:69451449-69451468 None:intergenic 40.0%
GTCCACACTTATAACCAATG+GGG + chr2_2:69451475-69451494 None:intergenic 40.0%
CGTCCACACTTATAACCAAT+GGG + chr2_2:69451476-69451495 None:intergenic 40.0%
ACGTCCACACTTATAACCAA+TGG + chr2_2:69451477-69451496 None:intergenic 40.0%
GGCAACTTAAAAGAAACCGA+GGG + chr2_2:69451515-69451534 None:intergenic 40.0%
ACTCTTCCTTGAAAGAGTTG+AGG - chr2_2:69451840-69451859 Msa0267710:CDS 40.0%
CAACAACCTCAACTCTTTCA+AGG + chr2_2:69451849-69451868 None:intergenic 40.0%
!!! TGTTGTTTTTGATTGGGTCG+TGG - chr2_2:69452651-69452670 Msa0267710:intron 40.0%
ATTGGGTCGTGGTTAAGTTT+GGG - chr2_2:69452662-69452681 Msa0267710:intron 40.0%
! ACGAAAGCTGAGTTTTCAGA+AGG - chr2_2:69453049-69453068 Msa0267710:intron 40.0%
! CGAAAGCTGAGTTTTCAGAA+GGG - chr2_2:69453050-69453069 Msa0267710:intron 40.0%
! GAAAGCTGAGTTTTCAGAAG+GGG - chr2_2:69453051-69453070 Msa0267710:intron 40.0%
! AAAGCTGAGTTTTCAGAAGG+GGG - chr2_2:69453052-69453071 Msa0267710:intron 40.0%
TTGGAAACACAAACCCATCT+TGG + chr2_2:69454042-69454061 None:intergenic 40.0%
AATGGAGACCTTTCAGTGAA+AGG - chr2_2:69454617-69454636 Msa0267710:intron 40.0%
TCAGATGCAAAAGGGAATAC+TGG + chr2_2:69454907-69454926 None:intergenic 40.0%
!! CTGATTGGCTTAATTGGTAG+GGG - chr2_2:69454923-69454942 Msa0267710:intron 40.0%
TGCACTCTTCATCATCTTCT+TGG - chr2_2:69454996-69455015 Msa0267710:intron 40.0%
! ATTTGTTAGAACCTCTGTCG+GGG + chr2_2:69455041-69455060 None:intergenic 40.0%
AGGCCATCTGAGTATTTAGA+AGG - chr2_2:69455096-69455115 Msa0267710:intron 40.0%
TCACACACACTTAGCTCAAT+GGG + chr2_2:69455584-69455603 None:intergenic 40.0%
AGCTAGTGTTATGTGGTAGT+TGG - chr2_2:69455603-69455622 Msa0267710:intron 40.0%
GCAAGCTCCATTAATCTAAG+TGG - chr2_2:69455852-69455871 Msa0267710:intron 40.0%
AACAATCCCATGCATTAGGT+GGG + chr2_2:69455914-69455933 None:intergenic 40.0%
ATGCAACAATCCCATGCATT+AGG + chr2_2:69455918-69455937 None:intergenic 40.0%
GTGAAATTGTTGTGCTTCGT+TGG - chr2_2:69455993-69456012 Msa0267710:intron 40.0%
TGTGCTCAGGTTAAGAAACT+CGG - chr2_2:69456161-69456180 Msa0267710:intron 40.0%
GGGATAGTAACAGCAATTTG+AGG + chr2_2:69451428-69451447 None:intergenic 40.0%
ACTCTTCCTTGAAAGAGTTG+AGG - chr2_2:69451840-69451859 Msa0267710:CDS 40.0%
CAACAACCTCAACTCTTTCA+AGG + chr2_2:69451849-69451868 None:intergenic 40.0%
! GTTGCTGTTAGCTGCTATTA+TGG - chr2_2:69456711-69456730 Msa0267710:CDS 40.0%
CAAGAACTGCAATACCAACG+AGG + chr2_2:69451187-69451206 None:intergenic 45.0%
GGTATTGCAGTTCTTGTTGC+AGG - chr2_2:69451191-69451210 Msa0267710:three_prime_UTR 45.0%
! GTTGAAAGTGCAGGTGAATG+TGG - chr2_2:69451224-69451243 Msa0267710:three_prime_UTR 45.0%
AAAGTGCAGGTGAATGTGGA+AGG - chr2_2:69451228-69451247 Msa0267710:three_prime_UTR 45.0%
AAGTGCAGGTGAATGTGGAA+GGG - chr2_2:69451229-69451248 Msa0267710:three_prime_UTR 45.0%
!! AAGGGGTACTACACCAGATA+TGG - chr2_2:69451247-69451266 Msa0267710:three_prime_UTR 45.0%
AACTTTGCTAATCGCCCCAT+TGG - chr2_2:69451458-69451477 Msa0267710:intron 45.0%
CGGCAACTTAAAAGAAACCG+AGG + chr2_2:69451516-69451535 None:intergenic 45.0%
AGTGACGACAGAAATGGATC+CGG + chr2_2:69452614-69452633 None:intergenic 45.0%
AGAGCTAGTGACGACAGAAA+TGG + chr2_2:69452620-69452639 None:intergenic 45.0%
GATTGGGTCGTGGTTAAGTT+TGG - chr2_2:69452661-69452680 Msa0267710:intron 45.0%
!!! TTTTGGGTTGTCTTCGAGCT+AGG - chr2_2:69452695-69452714 Msa0267710:intron 45.0%
! CGACTGCTGAGCAATTTTAG+TGG - chr2_2:69452761-69452780 Msa0267710:intron 45.0%
CTAGGCTAGAGAAAGCCTTA+AGG + chr2_2:69452976-69452995 None:intergenic 45.0%
TTGTGTTCGTTGGGTCTTGA+AGG + chr2_2:69453004-69453023 None:intergenic 45.0%
GTTCACCAATGATTCTCAGC+TGG - chr2_2:69453476-69453495 Msa0267710:intron 45.0%
ATGAAGACCGAAAGCCAAGA+TGG - chr2_2:69454025-69454044 Msa0267710:intron 45.0%
TGAAGACCGAAAGCCAAGAT+GGG - chr2_2:69454026-69454045 Msa0267710:intron 45.0%
! CACAAACCCATCTTGGCTTT+CGG + chr2_2:69454035-69454054 None:intergenic 45.0%
!! GGAAAGCTGCATTGGTTGAA+TGG - chr2_2:69454599-69454618 Msa0267710:intron 45.0%
TTTGTTAGAACCTCTGTCGG+GGG + chr2_2:69455040-69455059 None:intergenic 45.0%
GCAATGACTCTTTGCCTACT+AGG + chr2_2:69455075-69455094 None:intergenic 45.0%
GTAGGCAAAGAGTCATTGCT+AGG - chr2_2:69455076-69455095 Msa0267710:intron 45.0%
TCGCCCCAAATCAGTAGAAA+AGG + chr2_2:69455202-69455221 None:intergenic 45.0%
AACTGACTAGGGCGAAGATT+GGG + chr2_2:69455287-69455306 None:intergenic 45.0%
TAACTGACTAGGGCGAAGAT+TGG + chr2_2:69455288-69455307 None:intergenic 45.0%
TCTCTCTTCAACCAGGCATA+AGG - chr2_2:69455359-69455378 Msa0267710:intron 45.0%
CACTTGGATGACATTGTGGT+TGG + chr2_2:69455557-69455576 None:intergenic 45.0%
CACACACACTTAGCTCAATG+GGG + chr2_2:69455583-69455602 None:intergenic 45.0%
CTCACACACACTTAGCTCAA+TGG + chr2_2:69455585-69455604 None:intergenic 45.0%
GTGTGTGAGCTAGTGTTATG+TGG - chr2_2:69455596-69455615 Msa0267710:intron 45.0%
TGCACTAGTGCTAATTGGTG+AGG + chr2_2:69455835-69455854 None:intergenic 45.0%
GAGCTTGCACTAGTGCTAAT+TGG + chr2_2:69455840-69455859 None:intergenic 45.0%
CAACAATCCCATGCATTAGG+TGG + chr2_2:69455915-69455934 None:intergenic 45.0%
GGTATTGCAGTTCTTGTTGC+AGG - chr2_2:69451191-69451210 Msa0267710:three_prime_UTR 45.0%
!! GTTGAAAGTGCTGGTGAATG+TGG - chr2_2:69456047-69456066 Msa0267710:intron 45.0%
!! AAAGTGCTGGTGAATGTGGA+AGG - chr2_2:69456051-69456070 Msa0267710:intron 45.0%
!! AAGTGCTGGTGAATGTGGAA+GGG - chr2_2:69456052-69456071 Msa0267710:intron 45.0%
! TCTTTTGCTGCACTTGCACA+AGG + chr2_2:69456113-69456132 None:intergenic 45.0%
!! AATAATAATAATTTACATAT+AGG - chr2_2:69452263-69452282 Msa0267710:intron 5.0%
!! ATAATAATAATTTACATATA+GGG - chr2_2:69452264-69452283 Msa0267710:intron 5.0%
AGTGCAGGTGAATGTGGAAG+GGG - chr2_2:69451230-69451249 Msa0267710:three_prime_UTR 50.0%
TCTTGTGCTGCACTTGCACA+AGG + chr2_2:69451290-69451309 None:intergenic 50.0%
! CGCCCCATTGGTTATAAGTG+TGG - chr2_2:69451470-69451489 Msa0267710:intron 50.0%
GTGTACACAAGTGAGCTGCT+AGG + chr2_2:69451985-69452004 None:intergenic 50.0%
CCTTAAGGCTTTCTCTAGCC+CGG - chr2_2:69452186-69452205 Msa0267710:intron 50.0%
TACTGTTGGTCAGGTCCTGA+AGG + chr2_2:69452217-69452236 None:intergenic 50.0%
CAGAAATGGATCCGGATCGA+AGG + chr2_2:69452606-69452625 None:intergenic 50.0%
!!! AGCTAGGCCCTTTTTCGAGT+AGG - chr2_2:69452711-69452730 Msa0267710:intron 50.0%
TTGCTCAGCAGTCGACATGT+GGG + chr2_2:69452755-69452774 None:intergenic 50.0%
ATTGCTCAGCAGTCGACATG+TGG + chr2_2:69452756-69452775 None:intergenic 50.0%
TGGGTCTTGAAGGCTCATCT+AGG + chr2_2:69452994-69453013 None:intergenic 50.0%
GTCTACAACCCGTGAAAGTG+TGG - chr2_2:69453363-69453382 Msa0267710:intron 50.0%
TTGTTGCTCTCAACGCTCCT+CGG + chr2_2:69453626-69453645 None:intergenic 50.0%
CATCGCTTCGTCGAGTTCAA+TGG - chr2_2:69454259-69454278 Msa0267710:intron 50.0%
!! CTAGGGAGCGCTTGAATATC+TGG + chr2_2:69455261-69455280 None:intergenic 50.0%
ACTGACTAGGGCGAAGATTG+GGG + chr2_2:69455286-69455305 None:intergenic 50.0%
AATGCCTAGATCGCGTAGCT+TGG + chr2_2:69455323-69455342 None:intergenic 50.0%
AGCTACGCGATCTAGGCATT+CGG - chr2_2:69455323-69455342 Msa0267710:intron 50.0%
AACCAGGCATAAGGAGCGAT+GGG - chr2_2:69455368-69455387 Msa0267710:intron 50.0%
GTGGCACTTGGATGACATTG+TGG + chr2_2:69455561-69455580 None:intergenic 50.0%
ACACACTTAGCTCAATGGGG+TGG + chr2_2:69455580-69455599 None:intergenic 50.0%
!! AGTGCTGGTGAATGTGGAAG+GGG - chr2_2:69456053-69456072 Msa0267710:intron 50.0%
CAGCAAGGTTGCAACGCTTA+GGG + chr2_2:69456271-69456290 None:intergenic 50.0%
TCAGCAAGGTTGCAACGCTT+AGG + chr2_2:69456272-69456291 None:intergenic 50.0%
GTCCACACTTGTAACCGACA+GGG + chr2_2:69456298-69456317 None:intergenic 50.0%
! CCGGGCTAGAGAAAGCCTTA+AGG + chr2_2:69452189-69452208 None:intergenic 55.0%
TCAGGTCCTGAAGGCTCATC+CGG + chr2_2:69452208-69452227 None:intergenic 55.0%
TGCTCAGCAGTCGACATGTG+GGG + chr2_2:69452754-69452773 None:intergenic 55.0%
! CTCGGGACAAGTGGTGTCAA+AGG + chr2_2:69453608-69453627 None:intergenic 55.0%
CTTTGACACCACTTGTCCCG+AGG - chr2_2:69453606-69453625 Msa0267710:intron 55.0%
TGTTGCTCTCAACGCTCCTC+GGG + chr2_2:69453625-69453644 None:intergenic 55.0%
GGGCGAAGATTGGGGAACTA+GGG + chr2_2:69455278-69455297 None:intergenic 55.0%
AGGGCGAAGATTGGGGAACT+AGG + chr2_2:69455279-69455298 None:intergenic 55.0%
ACCTCCAAGCTACGCGATCT+AGG - chr2_2:69455316-69455335 Msa0267710:intron 55.0%
GCTACGCGATCTAGGCATTC+GGG - chr2_2:69455324-69455343 Msa0267710:intron 55.0%
CGCTTCGTCTCTCTTCAACC+AGG - chr2_2:69455352-69455371 Msa0267710:intron 55.0%
CAACCAGGCATAAGGAGCGA+TGG - chr2_2:69455367-69455386 Msa0267710:intron 55.0%
TCTACAATCCCCCAAGCACG+AGG - chr2_2:69455414-69455433 Msa0267710:intron 55.0%
CTACAATCCCCCAAGCACGA+GGG - chr2_2:69455415-69455434 Msa0267710:intron 55.0%
TAGCTCAATGGGGTGGCACT+TGG + chr2_2:69455573-69455592 None:intergenic 55.0%
AACCTTGCTGATCGCCCTGT+CGG - chr2_2:69456281-69456300 Msa0267710:intron 55.0%
CGTCCACACTTGTAACCGAC+AGG + chr2_2:69456299-69456318 None:intergenic 55.0%
TCTAGCCCGGATGAGCCTTC+AGG - chr2_2:69452199-69452218 Msa0267710:intron 60.0%
CAGGTCCTGAAGGCTCATCC+GGG + chr2_2:69452207-69452226 None:intergenic 60.0%
GCCTGTGGTGACCTTCGATC+CGG - chr2_2:69452592-69452611 Msa0267710:intron 60.0%
TCCGGATCGAAGGTCACCAC+AGG + chr2_2:69452596-69452615 None:intergenic 60.0%
TCAGCAGTCGACATGTGGGG+AGG + chr2_2:69452751-69452770 None:intergenic 60.0%
TCAACGCTCCTCGGGACAAG+TGG + chr2_2:69453617-69453636 None:intergenic 60.0%
TTGTACCAGACCCCCGACAG+AGG - chr2_2:69455027-69455046 Msa0267710:intron 60.0%
TAGAACCTCTGTCGGGGGTC+TGG + chr2_2:69455035-69455054 None:intergenic 60.0%
GCCTAGATCGCGTAGCTTGG+AGG + chr2_2:69455320-69455339 None:intergenic 60.0%
TGCCCATCGCTCCTTATGCC+TGG + chr2_2:69455373-69455392 None:intergenic 60.0%
AATCCCCCAAGCACGAGGGT+CGG - chr2_2:69455419-69455438 Msa0267710:intron 60.0%
AACCGACAGGGCGATCAGCA+AGG + chr2_2:69456286-69456305 None:intergenic 60.0%
! CGCCCTGTCGGTTACAAGTG+TGG - chr2_2:69456293-69456312 Msa0267710:intron 60.0%
ATCCCCCAAGCACGAGGGTC+GGG - chr2_2:69455420-69455439 Msa0267710:intron 65.0%
TCGCCCGACCCTCGTGCTTG+GGG + chr2_2:69455426-69455445 None:intergenic 70.0%
CTCGCCCGACCCTCGTGCTT+GGG + chr2_2:69455427-69455446 None:intergenic 70.0%
CGCCCGACCCTCGTGCTTGG+GGG + chr2_2:69455425-69455444 None:intergenic 75.0%
GCTCGCCCGACCCTCGTGCT+TGG + chr2_2:69455428-69455447 None:intergenic 75.0%
Chromosome Type Strat End Strand Name
chr2_2 gene 69451158 69456931 69451158 ID=Msa0267710;Name=Msa0267710
chr2_2 mRNA 69451158 69456931 69451158 ID=Msa0267710-mRNA-1;Parent=Msa0267710;Name=Msa0267710-mRNA-1;_AED=0.18;_eAED=0.18;_QI=0|0.2|0.16|1|0.6|0.33|6|268|212
chr2_2 exon 69451158 69451442 69451158 ID=Msa0267710-mRNA-1:exon:22147;Parent=Msa0267710-mRNA-1
chr2_2 exon 69451772 69451919 69451772 ID=Msa0267710-mRNA-1:exon:22146;Parent=Msa0267710-mRNA-1
chr2_2 exon 69451944 69452117 69451944 ID=Msa0267710-mRNA-1:exon:22145;Parent=Msa0267710-mRNA-1
chr2_2 exon 69456228 69456254 69456228 ID=Msa0267710-mRNA-1:exon:22144;Parent=Msa0267710-mRNA-1
chr2_2 exon 69456653 69456852 69456653 ID=Msa0267710-mRNA-1:exon:22143;Parent=Msa0267710-mRNA-1
chr2_2 exon 69456859 69456931 69456859 ID=Msa0267710-mRNA-1:exon:22142;Parent=Msa0267710-mRNA-1
chr2_2 CDS 69456859 69456931 69456859 ID=Msa0267710-mRNA-1:cds;Parent=Msa0267710-mRNA-1
chr2_2 CDS 69456653 69456852 69456653 ID=Msa0267710-mRNA-1:cds;Parent=Msa0267710-mRNA-1
chr2_2 CDS 69456228 69456254 69456228 ID=Msa0267710-mRNA-1:cds;Parent=Msa0267710-mRNA-1
chr2_2 CDS 69451944 69452117 69451944 ID=Msa0267710-mRNA-1:cds;Parent=Msa0267710-mRNA-1
chr2_2 CDS 69451772 69451919 69451772 ID=Msa0267710-mRNA-1:cds;Parent=Msa0267710-mRNA-1
chr2_2 CDS 69451426 69451442 69451426 ID=Msa0267710-mRNA-1:cds;Parent=Msa0267710-mRNA-1
chr2_2 three_prime_UTR 69451158 69451425 69451158 ID=Msa0267710-mRNA-1:three_prime_utr;Parent=Msa0267710-mRNA-1
Gene Sequence

>Msa0267710

ATGGAGGGCCTTATGAAATTGTTTTGCCTCGTTGGTATTGCAGTTCTTGTTGCAGGAATTCATAGAGTTGAAAGTGAATGTGGAAGGGGTACTACACCAGATATGGAAGCATTTAAGCTTGCTCCTTGTGCAAGTGCAGCACAAGATGAAAATGCTAGTGTCTCACAAAGTTGTTGTGATCAGACTAAGAAACTTGGTCAGAATCCAAGTTGTCTTTGTGCAGTTTTGCTCTCAAACGTTGCTAAAATGTCTGGTGTTAACCCTCAAATTGCTCTTACACTCTTCCTTGAAAGAGTTGAGAAGAAAAAAATGGAGGGTCTTGTGAAATTGTTGTGCTTCGTTGGTATTGCAGTTCTTGTTGCAGGAATTCATAGAGTTGAAAGTGCTGGTGAATGTGGAAGGGGTACTACACCAGACAATGAAGCTTTTAAGCTACTTCCTTGTGCAAGTGCAGCAAAAGATGAAAATGCTAGTGTTAAGAAACTCGGTCAGAATCCAAGTTGTCTTTGTGCTGTTATGCTTTCAAACGTTGCTAAAATGTCTGGTGCTAACCCTCAAATTGCTGTTACTATCCCTAAGCGTTGCAACCTTGCTGATCGCCCTGTCGGTTACAAGTGTGGACCTTACACTCTTCCTTGA

Protein sequence

>Msa0267710

MEGLMKLFCLVGIAVLVAGIHRVESECGRGTTPDMEAFKLAPCASAAQDENASVSQSCCDQTKKLGQNPSCLCAVLLSNVAKMSGVNPQIALTLFLERVEKKKMEGLVKLLCFVGIAVLVAGIHRVESAGECGRGTTPDNEAFKLLPCASAAKDENASVKKLGQNPSCLCAVMLSNVAKMSGANPQIAVTIPKRCNLADRPVGYKCGPYTLP*