AlfalfaGEDB Alfalfa Gene Editing Database

M. sativa cultivar zhongmu-4 / Msa0109900

Query id Subject id identity % alignment length mismatches gap openings q. start q. end s. start s. end e-value bit score
Msa0109900 MtrunA17_Chr1g0181141 90.806 968 48 3 1 931 1 964 0.0 1555
Msa0109900 MtrunA17_Chr1g0167361 91.925 966 34 5 1 931 1 957 0.0 1551
Query id Subject id identity % alignment length mismatches gap openings q. start q. end s. start s. end e-value bit score
Msa0109900 AT1G69070.1 49.085 929 382 14 31 923 18 891 0.0 763
Msa0109900 AT1G69070.2 48.927 932 382 14 31 923 18 894 0.0 762

Find 188 sgRNAs with CRISPR-Local

Find 584 sgRNAs with CRISPR-GE


CRISPR-Local

CRISPR-Local
sgRNA_sequence on_target_score Position Region
CCCTCCAATGACTATCTTCT+TGG 0.180101 1_3:+21978610 None:intergenic
TTCGTCCATCACTTCCTTCT+TGG 0.198459 1_3:+21980053 None:intergenic
TCTTCACTACTGACAGTTTC+AGG 0.214470 1_3:-21974078 Msa0109900:intron
CTGCCAGTTATATCATCTTA+TGG 0.216501 1_3:-21974203 Msa0109900:intron
TGAAGAAACTATGACTAAAA+AGG 0.225009 1_3:-21979002 Msa0109900:CDS
GTTGTTCTTCTTCTTCTTGC+TGG 0.262193 1_3:+21982663 None:intergenic
TGCTTTCATGGCTACCGCTT+CGG 0.266628 1_3:+21982630 None:intergenic
TTCAAAGCTTTCATCTTGTT+TGG 0.273827 1_3:+21979807 None:intergenic
GATGAAGGGCTTGATGATTT+TGG 0.273921 1_3:-21982400 Msa0109900:CDS
GGCTCATTCTGAGGCCTTGT+TGG 0.284401 1_3:-21979841 Msa0109900:CDS
GAAGAAGAAGAACAACAAAA+TGG 0.291060 1_3:-21982656 Msa0109900:CDS
GCTTTCATGGCTACCGCTTC+GGG 0.292063 1_3:+21982631 None:intergenic
TCAAGTAGTAATCTCAAAAT+TGG 0.299845 1_3:+21973679 None:intergenic
TTCGGAGCTTCAATTATATA+AGG 0.299927 1_3:+21978563 None:intergenic
AGAATACTACTTTGAAAGAT+TGG 0.304400 1_3:-21978838 Msa0109900:CDS
ATATCACGGCCAGATGTTAT+TGG 0.309858 1_3:+21976814 None:intergenic
GCACATATTGCAGCAAAGTA+TGG 0.315156 1_3:+21977140 None:intergenic
GTAAAATGTTGGCATCTAAA+AGG 0.322254 1_3:-21972820 None:intergenic
CTTTCAGCTCGCTCACGGTC+TGG 0.326015 1_3:+21973349 None:intergenic
TTTGCAGATAATTCAGATTT+GGG 0.330476 1_3:-21980394 Msa0109900:intron
TTCTTGATGCAGCTATGTTA+AGG 0.339589 1_3:-21973386 Msa0109900:intron
TTGGATGATTTCGCCATTGT+TGG 0.340307 1_3:+21982736 None:intergenic
TTCAGTAATTTGATTGGAAC+TGG 0.357854 1_3:+21973529 None:intergenic
TTTGAAGATGAGATGCTTGA+TGG 0.376740 1_3:-21980815 Msa0109900:CDS
AATCTTCGGAGTTTATTGAT+AGG 0.376829 1_3:-21982438 Msa0109900:CDS
GAAAGTGTAAAGGGAGATAA+TGG 0.377920 1_3:-21978644 Msa0109900:CDS
TTAAGAAGTAAAACACAAAA+TGG 0.382409 1_3:-21972990 Msa0109900:three_prime_UTR
TTAGGATTCAGTAATTTGAT+TGG 0.384079 1_3:+21973523 None:intergenic
GATTCTGTTGAAAGTGTAAA+GGG 0.386577 1_3:-21978653 Msa0109900:CDS
AAAATATGCCAAATGCATTA+CGG 0.387295 1_3:-21973642 Msa0109900:CDS
AAGCATGTTCTTGCTCTTGA+AGG 0.389263 1_3:+21973176 None:intergenic
TCCATTGGCGATGCTGCGTT+TGG 0.393857 1_3:+21982717 None:intergenic
GACAATGAATAATTCTGTTC+AGG 0.394333 1_3:-21979721 Msa0109900:intron
AGGTGAGGCGCGAAGCTAAA+GGG 0.397180 1_3:-21973309 Msa0109900:CDS
AGTATCACAGGAGTCATAAC+TGG 0.397195 1_3:+21976865 None:intergenic
AAAGCAAGAGCTGAGAAGTA+TGG 0.398033 1_3:-21973214 Msa0109900:CDS
AAACAAGATGAAAGCTTTGA+AGG 0.398300 1_3:-21979805 Msa0109900:CDS
ATTACTGAATCCTAAGTTTG+AGG 0.398976 1_3:-21973515 Msa0109900:CDS
GATTTCGCCATTGTTGGGTT+TGG 0.400700 1_3:+21982742 None:intergenic
TCTTGATGCAGCTATGTTAA+GGG 0.404207 1_3:-21973385 Msa0109900:intron
TGACCAACTTGTCAGACAAA+TGG 0.412014 1_3:-21979593 Msa0109900:CDS
AGTGAAGAATGGAGAGTCTT+CGG 0.413772 1_3:+21974093 None:intergenic
GAACATTTCAGTTTAGTTGT+CGG 0.414260 1_3:-21972921 Msa0109900:three_prime_UTR
AAATATGCCAAATGCATTAC+GGG 0.415102 1_3:-21973641 Msa0109900:CDS
TCCGTACTCATCTCTATCAA+TGG 0.415890 1_3:+21977167 None:intergenic
GAGATCGCAGCGTGAACGTC+AGG 0.416024 1_3:-21982365 Msa0109900:intron
GAAGATGATGATGAGTTTGA+AGG 0.419285 1_3:-21980863 Msa0109900:CDS
GAATACTACTTTGAAAGATT+GGG 0.420352 1_3:-21978837 Msa0109900:CDS
TTAATCAATTCAACGTTCAA+TGG 0.421058 1_3:+21977203 None:intergenic
TATCACGGCCAGATGTTATT+GGG 0.421115 1_3:+21976815 None:intergenic
TCATCACCAGAGAGAGATCT+TGG 0.422739 1_3:+21979049 None:intergenic
GATGAGTTTGAAGGAATTGA+TGG 0.429378 1_3:-21980854 Msa0109900:CDS
TCCTCATTAATGCGCAATAG+TGG 0.429661 1_3:+21974163 None:intergenic
ACGAGCCAACCCCATTCGTT+TGG 0.430062 1_3:+21982519 None:intergenic
CATAATTCTTCAAAGGTCTT+CGG 0.431108 1_3:+21978545 None:intergenic
AGGCATTGATATATCCTTGT+AGG 0.432380 1_3:+21973737 None:intergenic
CATAACTGGATGTCTAAAAT+CGG 0.433346 1_3:+21976879 None:intergenic
CGTAGGAAATTCGAAGTAAT+GGG 0.434226 1_3:-21982562 Msa0109900:CDS
TTTGAAGGAATTGATGGTCT+TGG 0.436407 1_3:-21980848 Msa0109900:CDS
TCGGCTACGCCAGCTTCGCC+TGG 0.440126 1_3:+21980340 None:intergenic
AATGCCAAGAAGATAGTCAT+TGG 0.441829 1_3:-21978614 Msa0109900:CDS
CCAACCCATTCGAGTCAATC+TGG 0.442365 1_3:-21982588 Msa0109900:CDS
AGATAAGGACTTCACTTCTC+TGG 0.442591 1_3:-21979862 Msa0109900:CDS
TGGTGAAGATGATGATGATT+TGG 0.442638 1_3:-21978915 Msa0109900:CDS
AAGAGAACATCTAGAGGAGT+TGG 0.446316 1_3:-21979506 Msa0109900:CDS
GTGAAGAATGGAGAGTCTTC+GGG 0.446825 1_3:+21974094 None:intergenic
TGGATGATTTCGCCATTGTT+GGG 0.447701 1_3:+21982737 None:intergenic
GAGGAAGAAGACACTTCTTA+AGG 0.451715 1_3:-21982479 Msa0109900:CDS
GATGAAAGCTTTGAAGGCTC+TGG 0.454907 1_3:-21979799 Msa0109900:CDS
ACTTCTTAAAATAATAATGC+GGG 0.457335 1_3:+21973004 None:intergenic
ACAAGTTGGTCATATTCATC+AGG 0.458842 1_3:+21979604 None:intergenic
TCTTAATCGTCAATCGGATT+CGG 0.460470 1_3:-21978487 Msa0109900:CDS
GACCAACTTGTCAGACAAAT+GGG 0.467069 1_3:-21979592 Msa0109900:CDS
CACTTCTCTGGCTCATTCTG+AGG 0.468513 1_3:-21979850 Msa0109900:CDS
AAATCTGGACAACTAGGAAA+AGG 0.473133 1_3:-21973151 Msa0109900:CDS
TTCAGATAGGCGGAAGACTC+AGG 0.473936 1_3:-21979548 Msa0109900:CDS
CGCTGTGTCTATTGCGATTG+TGG 0.475563 1_3:-21976921 Msa0109900:CDS
ATCCCATTTGTCTGACAAGT+TGG 0.477539 1_3:+21979590 None:intergenic
GAACGAACTCAAGTTATCAT+AGG 0.478056 1_3:+21973717 None:intergenic
CTACTTCTTGCTTGATGTGA+AGG 0.483308 1_3:-21973260 Msa0109900:CDS
ATGCAGAGTCCAGGCGAAGC+TGG 0.483777 1_3:-21980349 Msa0109900:CDS
ACGTAGGAAATTCGAAGTAA+TGG 0.485316 1_3:-21982563 Msa0109900:CDS
GACTCAGGAAGAGATTGATC+AGG 0.485715 1_3:-21979533 Msa0109900:CDS
AAGAAGAAGAACAACAAAAT+GGG 0.487536 1_3:-21982655 Msa0109900:CDS
GTTGTTGCTGCTAGTTCCAT+TGG 0.489893 1_3:+21982702 None:intergenic
GGCATTGATATATCCTTGTA+GGG 0.493842 1_3:+21973738 None:intergenic
AGGTCTGAAGATTCTGATGA+TGG 0.496264 1_3:-21978890 Msa0109900:CDS
CAGATAATTCAGATTTGGGT+CGG 0.497727 1_3:-21980390 Msa0109900:CDS
TGAGTCTTCCGCCTATCTGA+AGG 0.499718 1_3:+21979550 None:intergenic
TAGAAACAGACATTCGTAGT+TGG 0.500210 1_3:+21972872 None:intergenic
TGATTCTGTTGAAAGTGTAA+AGG 0.500977 1_3:-21978654 Msa0109900:CDS
AAAGGAGATACCAAACGAAT+GGG 0.501676 1_3:-21982529 Msa0109900:CDS
ATGCGTTGCCCAATAACATC+TGG 0.502843 1_3:-21976823 Msa0109900:CDS
ACACTATCTTAATCGTCAAT+CGG 0.505513 1_3:-21978493 Msa0109900:CDS
TGAACAGAGTAACAAATCTT+CGG 0.505782 1_3:-21982452 Msa0109900:CDS
GCCACTATTGCGCATTAATG+AGG 0.509019 1_3:-21974164 Msa0109900:CDS
GAGTTTATTGATAGGCGAAT+CGG 0.509318 1_3:-21982430 Msa0109900:CDS
AAGATGGCTTGTCTGCTAAA+CGG 0.510993 1_3:-21979743 Msa0109900:CDS
GAGAAACCAAGATCTCTCTC+TGG 0.511990 1_3:-21979055 Msa0109900:CDS
CGAATCGGTGAGAATGATGA+AGG 0.515160 1_3:-21982415 Msa0109900:CDS
GAATTAATGTTAAAACTCGC+GGG 0.518164 1_3:-21973101 Msa0109900:three_prime_UTR
GAGGTGAGGCGCGAAGCTAA+AGG 0.518340 1_3:-21973310 Msa0109900:CDS
AGCCGCGGAAGAAGTTGATA+AGG 0.521425 1_3:-21978720 Msa0109900:CDS
ATGTCTGTTTCTAAATAGCA+TGG 0.524450 1_3:-21972862 Msa0109900:three_prime_UTR
AAACTGTCAGTAGTGAAGAA+TGG 0.525835 1_3:+21974082 None:intergenic
AAGGAATTGATGGTCTTGGA+AGG 0.527484 1_3:-21980844 Msa0109900:CDS
TGAAGAATTATGTTCACTAG+TGG 0.527610 1_3:-21978534 Msa0109900:CDS
CACATATTGCAGCAAAGTAT+GGG 0.528243 1_3:+21977141 None:intergenic
AGAACATCTAGAGGAGTTGG+AGG 0.530134 1_3:-21979503 Msa0109900:intron
ATGTTCTTGCTCTTGAAGGA+AGG 0.536825 1_3:+21973180 None:intergenic
AGGGAAAATGTCGAAAGAGT+TGG 0.540454 1_3:-21978591 Msa0109900:CDS
AGTCATAGTTTCTTCATCGA+CGG 0.541874 1_3:+21979009 None:intergenic
GTGACCAGATTGACTCGAAT+GGG 0.542975 1_3:+21982584 None:intergenic
AGACACAGCGTCTTTGAAGA+AGG 0.543316 1_3:+21976934 None:intergenic
TGAATTAATGTTAAAACTCG+CGG 0.549861 1_3:-21973102 Msa0109900:three_prime_UTR
TCGCACATCAATAGTATCAC+AGG 0.550865 1_3:+21976853 None:intergenic
TGGATGAACATCATACTTTG+AGG 0.551930 1_3:-21973579 Msa0109900:CDS
GGCGAAGCTGGCGTAGCCGA+CGG 0.553219 1_3:-21980337 Msa0109900:CDS
CGAGAGAAGAGATGAAGAGG+AGG 0.554549 1_3:-21978960 Msa0109900:CDS
AGTTTCTTCATCGACGGAGA+AGG 0.554848 1_3:+21979015 None:intergenic
TACTTCTTAAAATAATAATG+CGG 0.557320 1_3:+21973003 None:intergenic
TCTGGCCGTGATATTGCCGT+TGG 0.558685 1_3:-21976805 Msa0109900:CDS
TCTCTCTCTGGTGATGACCT+TGG 0.559106 1_3:-21979043 Msa0109900:CDS
GATAGTCACTTACAAAGTCA+TGG 0.562694 1_3:+21972966 None:intergenic
GAAGACGATGATATCAGTGC+TGG 0.566507 1_3:-21978773 Msa0109900:CDS
TCTCGAGAGAAGAGATGAAG+AGG 0.567993 1_3:-21978963 Msa0109900:CDS
AAGCTGGCGTAGCCGACGGT+GGG 0.570154 1_3:-21980333 Msa0109900:CDS
CCTGCTGGAAGGATTAGATA+AGG 0.573153 1_3:-21979877 Msa0109900:CDS
ACCATTGATAGAGATGAGTA+CGG 0.573361 1_3:-21977168 Msa0109900:CDS
GCTCGTAGTATGCAGAGTCC+AGG 0.573666 1_3:-21980358 Msa0109900:CDS
CTCAAAACCAAACCCAACAA+TGG 0.573761 1_3:-21982749 Msa0109900:exon
TCCAAACGCAGCATCGCCAA+TGG 0.573826 1_3:-21982718 Msa0109900:CDS
TACCTTATCAACTTCTTCCG+CGG 0.574234 1_3:+21978718 None:intergenic
CGTGACCAGATTGACTCGAA+TGG 0.575204 1_3:+21982583 None:intergenic
GAAGCTGGCGTAGCCGACGG+TGG 0.575891 1_3:-21980334 Msa0109900:CDS
GTTCTCTTGCTATTGAGAAG+AGG 0.577774 1_3:-21982498 Msa0109900:CDS
GATGATGATGATATCAGTGC+AGG 0.578213 1_3:-21978806 Msa0109900:CDS
AGATACCAAACGAATGGGGT+TGG 0.579161 1_3:-21982524 Msa0109900:CDS
GGTGAGGCGCGAAGCTAAAG+GGG 0.580163 1_3:-21973308 Msa0109900:CDS
CAAGAGCTGAGAAGTATGGA+AGG 0.580782 1_3:-21973210 Msa0109900:CDS
GAAAGGAGATACCAAACGAA+TGG 0.581321 1_3:-21982530 Msa0109900:CDS
GCCAAGAAGATAGTCATTGG+AGG 0.581374 1_3:-21978611 Msa0109900:CDS
TCAGGAAGAGATTGATCAGG+AGG 0.581593 1_3:-21979530 Msa0109900:CDS
ACGGGATAAAATTAAAGATG+TGG 0.582762 1_3:-21973623 Msa0109900:CDS
TTCACTCGAATCTTCAGCAG+CGG 0.584454 1_3:+21979111 None:intergenic
TAAAACCAAGAAGGAAGTGA+TGG 0.586650 1_3:-21980058 Msa0109900:CDS
TAGTGAACATAATTCTTCAA+AGG 0.586872 1_3:+21978538 None:intergenic
CTTCTTAAAATAATAATGCG+GGG 0.594869 1_3:+21973005 None:intergenic
GAGTCTTCCGCCTATCTGAA+GGG 0.595781 1_3:+21979551 None:intergenic
CCAAGAAGATAGTCATTGGA+GGG 0.596888 1_3:-21978610 Msa0109900:CDS
CCTTATCTAATCCTTCCAGC+AGG 0.597560 1_3:+21979877 None:intergenic
ATCGGAACATGGAAATACCA+TGG 0.602060 1_3:+21976897 None:intergenic
CTATCACAGAAAGTAGCAGT+TGG 0.602687 1_3:-21976957 Msa0109900:intron
TTCTTAAAATAATAATGCGG+GGG 0.602816 1_3:+21973006 None:intergenic
TCTATTGCGATTGTGGTCCA+TGG 0.603912 1_3:-21976914 Msa0109900:CDS
AGCTGGCGTAGCCGACGGTG+GGG 0.605501 1_3:-21980332 Msa0109900:CDS
GGAGGAAAGAGAACATCTAG+AGG 0.609657 1_3:-21979512 Msa0109900:CDS
AAGAACCAACGGCAATATCA+CGG 0.614085 1_3:+21976800 None:intergenic
ACAGAGACATAAAACCAAGA+AGG 0.615445 1_3:-21980067 Msa0109900:intron
TCCTTGTAGGGTTTCAACAG+CGG 0.615747 1_3:+21973750 None:intergenic
AAAGATGAAGACCTGCTGGA+AGG 0.616144 1_3:-21979888 Msa0109900:CDS
ACCGCTGTTGAAACCCTACA+AGG 0.620068 1_3:-21973751 Msa0109900:CDS
GTGTCTGCTAAGTAAAATGT+TGG 0.625975 1_3:-21972831 Msa0109900:three_prime_UTR
AGGAATTGATGGTCTTGGAA+GGG 0.625979 1_3:-21980843 Msa0109900:CDS
TGCGTGCTCGCCCTTCAGAT+AGG 0.630079 1_3:-21979561 Msa0109900:CDS
TGGTTCAGTCAGAGCCAACA+AGG 0.630538 1_3:+21979827 None:intergenic
TCGAAGTAATGGGTCAGAAG+CGG 0.631084 1_3:-21982552 Msa0109900:CDS
TGGTTCAGAAGACGAAGATG+AGG 0.638131 1_3:-21978753 Msa0109900:CDS
GGATGTCTAAAATCGGAACA+TGG 0.639818 1_3:+21976886 None:intergenic
GAGAGAAGAGATGAAGAGGA+GGG 0.645634 1_3:-21978959 Msa0109900:CDS
TGAGCTGATTAAGTTGAAAG+TGG 0.649315 1_3:-21973599 Msa0109900:CDS
TGAGGCGACCACTTCAAATG+CGG 0.651913 1_3:-21973561 Msa0109900:CDS
GTAATGGGTCAGAAGCGGAA+AGG 0.654267 1_3:-21982547 Msa0109900:CDS
TCTTCTAGTGAAGATGATGA+TGG 0.654306 1_3:-21978935 Msa0109900:CDS
AATTAATGTTAAAACTCGCG+GGG 0.655320 1_3:-21973100 Msa0109900:three_prime_UTR
AGAACATAAGAAAGAACCAA+CGG 0.656060 1_3:+21976789 None:intergenic
TGAGGATGAAGAAAGAGCCG+CGG 0.658294 1_3:-21978735 Msa0109900:CDS
AAGATGATGATGATTTGGAA+AGG 0.659962 1_3:-21978910 Msa0109900:CDS
TCGAGTCAATCTGGTCACGT+AGG 0.664541 1_3:-21982579 Msa0109900:CDS
CCAGATTGACTCGAATGGGT+TGG 0.666324 1_3:+21982588 None:intergenic
AGATTCTGATGATGGATCAG+AGG 0.668735 1_3:-21978882 Msa0109900:CDS
GAATCGGTGAGAATGATGAA+GGG 0.669136 1_3:-21982414 Msa0109900:CDS
CAACAAAATGGGTCCCGAAG+CGG 0.671592 1_3:-21982644 Msa0109900:CDS
GAAATGTTCAGATTCTCTCG+AGG 0.678407 1_3:+21972935 None:intergenic
CGACGGAGAAGGAATCGCCA+AGG 0.679772 1_3:+21979026 None:intergenic
GTGCTCGCCCTTCAGATAGG+CGG 0.701979 1_3:-21979558 Msa0109900:CDS
AAGGAGATACCAAACGAATG+GGG 0.713699 1_3:-21982528 Msa0109900:CDS
AATGAGAAAACAATTGCACG+AGG 0.742746 1_3:+21982854 None:intergenic

CRISPR-GE

badsite warning sgRNA_sequence Strand Position Region GC_content
!! AAAAAAAAAAAAAAAAAAAA+AGG + chr1_3:21979586-21979605 None:intergenic 0.0%
!!! AAAACAATATAACTTTATTT+TGG + chr1_3:21974273-21974292 None:intergenic 10.0%
!!! AAGATTTTAGAATATTAAAT+AGG - chr1_3:21980557-21980576 Msa0109900:intron 10.0%
!!! AGATTTTAGAATATTAAATA+GGG - chr1_3:21980558-21980577 Msa0109900:intron 10.0%
!!! TTTTGTGTGTAAAATAAAAT+TGG + chr1_3:21972887-21972906 None:intergenic 15.0%
!! TGGATTTAACAATTAATTTA+AGG - chr1_3:21973591-21973610 Msa0109900:CDS 15.0%
!!! TTAATCTTTTGCTATATAAA+TGG + chr1_3:21973645-21973664 None:intergenic 15.0%
!!! ATTTACTTTTTTTTCAATTG+AGG - chr1_3:21973792-21973811 Msa0109900:intron 15.0%
!! AAAAGAAGCAAAAAAAAAAT+CGG + chr1_3:21975157-21975176 None:intergenic 15.0%
!! GATATATAAGAAAATAGTAA+CGG + chr1_3:21975444-21975463 None:intergenic 15.0%
!! TTAATATAACAGTTAAAACT+CGG + chr1_3:21977425-21977444 None:intergenic 15.0%
!!! TGTTATATTAAACTTTTATG+TGG - chr1_3:21977434-21977453 Msa0109900:intron 15.0%
!! TAGAAAAAGAAAAAAAAACA+GGG + chr1_3:21978027-21978046 None:intergenic 15.0%
!!! AACTTGTTTTAATTAGTTTT+GGG + chr1_3:21978136-21978155 None:intergenic 15.0%
!!! GTTTAATTTGAAAATGTTAA+TGG - chr1_3:21978221-21978240 Msa0109900:intron 15.0%
!!! CTTACTTTTAAAAATTTTGT+AGG - chr1_3:21978996-21979015 Msa0109900:CDS 15.0%
!! ATTTGTAACAAAAAACTTAA+TGG + chr1_3:21979071-21979090 None:intergenic 15.0%
!!! TTAAGTTTTTTGTTACAAAT+TGG - chr1_3:21979071-21979090 Msa0109900:CDS 15.0%
!!! AAGTTTTTTTTGTTACAAAT+TGG + chr1_3:21979510-21979529 None:intergenic 15.0%
!! TTGTAACAAAAAAAACTTAA+AGG - chr1_3:21979512-21979531 Msa0109900:CDS 15.0%
!!! TATAGTTTTACATAAAGAAT+TGG + chr1_3:21979694-21979713 None:intergenic 15.0%
!! AAAGTTTGAATAAATACTAT+TGG + chr1_3:21979920-21979939 None:intergenic 15.0%
!!! TTTTTATAGTATACAAGTAT+AGG + chr1_3:21980308-21980327 None:intergenic 15.0%
!!! ATATTAAATAGGGTTATTTT+TGG - chr1_3:21980568-21980587 Msa0109900:intron 15.0%
!! TGATAAATATCAAACTAATT+TGG - chr1_3:21980609-21980628 Msa0109900:intron 15.0%
!! TACACATAATATTAATGATA+CGG - chr1_3:21980637-21980656 Msa0109900:intron 15.0%
!!! ATATCTTATCTGTATTTTAA+GGG + chr1_3:21981014-21981033 None:intergenic 15.0%
!!! AATATCTTATCTGTATTTTA+AGG + chr1_3:21981015-21981034 None:intergenic 15.0%
!! AATAGTTAATAAGGATAATT+TGG + chr1_3:21981249-21981268 None:intergenic 15.0%
!! AAATTATCCTTATTAACTAT+TGG - chr1_3:21981248-21981267 Msa0109900:intron 15.0%
!!! TAGTTTTAAAAGTAATACTT+TGG - chr1_3:21981272-21981291 Msa0109900:intron 15.0%
!! AGAAAAAGTTATTATTACAT+TGG - chr1_3:21981335-21981354 Msa0109900:intron 15.0%
!!! CATTTTGAAACAATTTTTTT+TGG - chr1_3:21981375-21981394 Msa0109900:intron 15.0%
!! AATCATAATTAGAAAAGATA+TGG + chr1_3:21981916-21981935 None:intergenic 15.0%
!! AAATTGGTAAAAATATTTCT+GGG + chr1_3:21982023-21982042 None:intergenic 15.0%
!! AAAATTGGTAAAAATATTTC+TGG + chr1_3:21982024-21982043 None:intergenic 15.0%
!! TACTTCTTAAAATAATAATG+CGG + chr1_3:21982715-21982734 None:intergenic 15.0%
!! GCTATTTATCAAAATATCAA+TGG + chr1_3:21973401-21973420 None:intergenic 20.0%
!! ATTTCTGTGAAATTGATTAT+AGG - chr1_3:21973530-21973549 Msa0109900:CDS 20.0%
!! TTGACTAAAAAAAAACTGTT+TGG + chr1_3:21973922-21973941 None:intergenic 20.0%
!!! ACTGTTTTCATAATTTATCT+TGG + chr1_3:21974134-21974153 None:intergenic 20.0%
!!! AAGTCAATTTGTTTTCATAT+AGG + chr1_3:21974162-21974181 None:intergenic 20.0%
!! CATTATTCACAAAAATTTCA+AGG + chr1_3:21974760-21974779 None:intergenic 20.0%
!! TACCTAATATAACATGTTAA+TGG - chr1_3:21974971-21974990 Msa0109900:intron 20.0%
!!! TTTTTTTTTGCTTCTTTTTC+TGG - chr1_3:21975159-21975178 Msa0109900:intron 20.0%
!! TAAAATAAACAGTATGAACA+TGG + chr1_3:21975215-21975234 None:intergenic 20.0%
!! CATTTGTGAAAAGTTTAAAA+AGG + chr1_3:21975578-21975597 None:intergenic 20.0%
!! AATGAAAAAAGTGATAAAGA+TGG - chr1_3:21975956-21975975 Msa0109900:intron 20.0%
!! CTTATAAAAAGAAGATATCA+GGG + chr1_3:21976051-21976070 None:intergenic 20.0%
!! TCTTATAAAAAGAAGATATC+AGG + chr1_3:21976052-21976071 None:intergenic 20.0%
!! ATCCATAATTTCAGAAAAAA+CGG - chr1_3:21976568-21976587 Msa0109900:intron 20.0%
!! TAATATAACAGTTAAAACTC+GGG + chr1_3:21977424-21977443 None:intergenic 20.0%
!!! TATTCTATTTACAATTTTGC+TGG - chr1_3:21977597-21977616 Msa0109900:intron 20.0%
!! AGAAAAAGAAAAAAAAACAG+GGG + chr1_3:21978026-21978045 None:intergenic 20.0%
!! CTAGAAAAAGAAAAAAAAAC+AGG + chr1_3:21978028-21978047 None:intergenic 20.0%
!!! CTGTTTTTTTTTCTTTTTCT+AGG - chr1_3:21978026-21978045 Msa0109900:intron 20.0%
!!! AATGTTTTGTGGTATTTTAA+TGG + chr1_3:21978074-21978093 None:intergenic 20.0%
!!! CTTTATTACAAAATGTTTTG+TGG + chr1_3:21978085-21978104 None:intergenic 20.0%
!!! GAACTTGTTTTAATTAGTTT+TGG + chr1_3:21978137-21978156 None:intergenic 20.0%
!! TGATATAATCTAGTTAATAG+AGG - chr1_3:21978170-21978189 Msa0109900:intron 20.0%
!! AAGTTCCTCATAAAATATTT+AGG + chr1_3:21978382-21978401 None:intergenic 20.0%
!!! TTTGTTGAGAGTATAAAAAA+CGG - chr1_3:21978629-21978648 Msa0109900:CDS 20.0%
!! ATAGTTCTTGATAAAAGTTA+AGG + chr1_3:21978694-21978713 None:intergenic 20.0%
!!! TTTTATCAAGAACTATGAAT+TGG - chr1_3:21978698-21978717 Msa0109900:CDS 20.0%
!! TGTAACAGAAAAAACTTAAA+AGG + chr1_3:21979098-21979117 None:intergenic 20.0%
!! TTATGGATCATTTAACATTA+AGG - chr1_3:21979189-21979208 Msa0109900:intron 20.0%
!! GTAAGTAATCATGTTTAATA+AGG + chr1_3:21979236-21979255 None:intergenic 20.0%
!!! CAGATATTTTATGACTTAAA+AGG - chr1_3:21979483-21979502 Msa0109900:intron 20.0%
!! GTTATAAACATCTAACTTAA+AGG - chr1_3:21979543-21979562 Msa0109900:CDS 20.0%
!!! CTTTCTAAGATCTTTTTTAT+TGG - chr1_3:21979758-21979777 Msa0109900:CDS 20.0%
!!! AAAAAAGAAATTGCTGTTTA+CGG - chr1_3:21980344-21980363 Msa0109900:CDS 20.0%
!! AAAATCAATATAGAATACAC+TGG + chr1_3:21980763-21980782 None:intergenic 20.0%
!! AGTTAATTAGGTCATATATT+TGG + chr1_3:21980836-21980855 None:intergenic 20.0%
!! AATGATTAAAAGAAAGAGAA+TGG - chr1_3:21981215-21981234 Msa0109900:intron 20.0%
!! AAACTAACCAATAGTTAATA+AGG + chr1_3:21981258-21981277 None:intergenic 20.0%
!!! TAACATTTTTCTTGCAAAAA+AGG + chr1_3:21981681-21981700 None:intergenic 20.0%
!! GCTATGATAACAAATATAAA+TGG + chr1_3:21981804-21981823 None:intergenic 20.0%
!!! AATTATGATTTTTCGTTTAC+AGG - chr1_3:21981926-21981945 Msa0109900:intron 20.0%
!!! ATTATGATTTTTCGTTTACA+GGG - chr1_3:21981927-21981946 Msa0109900:intron 20.0%
!! ACTTCTTAAAATAATAATGC+GGG + chr1_3:21982714-21982733 None:intergenic 20.0%
!! TTAAGAAGTAAAACACAAAA+TGG - chr1_3:21982725-21982744 Msa0109900:CDS 20.0%
! AAGAAGAAGAACAACAAAAT+GGG - chr1_3:21973060-21973079 Msa0109900:three_prime_UTR 25.0%
! ATCAAAATATCAATGGTGAA+GGG + chr1_3:21973394-21973413 None:intergenic 25.0%
! TATCAAAATATCAATGGTGA+AGG + chr1_3:21973395-21973414 None:intergenic 25.0%
! TGTATAAGCCATATATGTAA+AGG - chr1_3:21973568-21973587 Msa0109900:CDS 25.0%
! TAAATCCACCTTTACATATA+TGG + chr1_3:21973579-21973598 None:intergenic 25.0%
! TCAAATAAGTCAATCTAAAC+AGG + chr1_3:21974007-21974026 None:intergenic 25.0%
! AATTTATCTTGGAGAACTTA+TGG + chr1_3:21974123-21974142 None:intergenic 25.0%
!! TTGTTTTCATGAGATATCTT+GGG - chr1_3:21974307-21974326 Msa0109900:intron 25.0%
!!! ATTTCACCTTATTTTCATCA+AGG + chr1_3:21974335-21974354 None:intergenic 25.0%
! CTAAAATAAGTGAATCCAAA+CGG - chr1_3:21974432-21974451 Msa0109900:intron 25.0%
! TAAAATAAGTGAATCCAAAC+GGG - chr1_3:21974433-21974452 Msa0109900:intron 25.0%
!! TCTCTAAAAGAGAATTGAAA+CGG - chr1_3:21974712-21974731 Msa0109900:intron 25.0%
!! TGTGAATAATGACTGTTTTA+TGG - chr1_3:21974769-21974788 Msa0109900:intron 25.0%
! CACCATTAACATGTTATATT+AGG + chr1_3:21974976-21974995 None:intergenic 25.0%
!! TTTGGTTATTTGTGAACTTT+TGG - chr1_3:21975083-21975102 Msa0109900:intron 25.0%
!! TTGGTTATTTGTGAACTTTT+GGG - chr1_3:21975084-21975103 Msa0109900:intron 25.0%
! AGTCACAAAAATAACACAAT+AGG + chr1_3:21975280-21975299 None:intergenic 25.0%
!! TTTTGCAGATAATTCAGATT+TGG - chr1_3:21975320-21975339 Msa0109900:intron 25.0%
! TTTGCAGATAATTCAGATTT+GGG - chr1_3:21975321-21975340 Msa0109900:intron 25.0%
! ATATTCCAACTTTCTCTTTA+TGG - chr1_3:21976079-21976098 Msa0109900:intron 25.0%
! TGAAGAAACTATGACTAAAA+AGG - chr1_3:21976713-21976732 Msa0109900:intron 25.0%
! GAAGAAACTATGACTAAAAA+GGG - chr1_3:21976714-21976733 Msa0109900:intron 25.0%
!! AGAATACTACTTTGAAAGAT+TGG - chr1_3:21976877-21976896 Msa0109900:CDS 25.0%
!! GAATACTACTTTGAAAGATT+GGG - chr1_3:21976878-21976897 Msa0109900:CDS 25.0%
! AAGGTAAAAAGATTGAATGT+TGG - chr1_3:21977014-21977033 Msa0109900:intron 25.0%
! TAGTGAACATAATTCTTCAA+AGG + chr1_3:21977180-21977199 None:intergenic 25.0%
! TAATTTGATTCAAATCTCCA+TGG - chr1_3:21977328-21977347 Msa0109900:intron 25.0%
! AACTCAACTGTGTAAATATA+GGG - chr1_3:21977511-21977530 Msa0109900:intron 25.0%
! GAAATTGAGAGAAAAAGAAT+TGG - chr1_3:21977966-21977985 Msa0109900:intron 25.0%
!!! ATTTTAATGGTTGTTAACCA+GGG + chr1_3:21978061-21978080 None:intergenic 25.0%
!!! TATTTTAATGGTTGTTAACC+AGG + chr1_3:21978062-21978081 None:intergenic 25.0%
! ATAATCTAGTTAATAGAGGT+TGG - chr1_3:21978174-21978193 Msa0109900:intron 25.0%
!! AATAGACTATTTTGCTTAGT+TGG - chr1_3:21978328-21978347 Msa0109900:intron 25.0%
!! CTGTTCCTAAATATTTTATG+AGG - chr1_3:21978374-21978393 Msa0109900:intron 25.0%
!!! TTCTCTTTTCAGGTATTTTA+TGG - chr1_3:21978449-21978468 Msa0109900:CDS 25.0%
! TTAATCAATTCAACGTTCAA+TGG + chr1_3:21978515-21978534 None:intergenic 25.0%
! TAGTTGAAAAAAATGGGTAA+CGG + chr1_3:21979152-21979171 None:intergenic 25.0%
! CGAAGTTAGTTGAAAAAAAT+GGG + chr1_3:21979158-21979177 None:intergenic 25.0%
! ACGAAGTTAGTTGAAAAAAA+TGG + chr1_3:21979159-21979178 None:intergenic 25.0%
! GTTTGATGAAAATATGACAA+TGG - chr1_3:21979458-21979477 Msa0109900:intron 25.0%
!!! CACTTTTTAATGGTAGAAAT+CGG + chr1_3:21979663-21979682 None:intergenic 25.0%
!! GTTTTACATAAAGAATTGGT+AGG + chr1_3:21979690-21979709 None:intergenic 25.0%
!!! TGAATAAATACTATTGGTTC+AGG + chr1_3:21979914-21979933 None:intergenic 25.0%
! TGATATATGTTTACTTTCAC+TGG + chr1_3:21979954-21979973 None:intergenic 25.0%
! TAAATACAAACATATGTGCA+TGG + chr1_3:21980056-21980075 None:intergenic 25.0%
! TGTTTGTATTTATTTGTGTG+TGG - chr1_3:21980064-21980083 Msa0109900:CDS 25.0%
!! CATTTTCTTGTATATTCTAC+TGG - chr1_3:21980240-21980259 Msa0109900:intron 25.0%
!!! ACAGCAATTTCTTTTTTTAC+TGG + chr1_3:21980341-21980360 None:intergenic 25.0%
! AGAAACTAATTGCTGAAAAA+GGG - chr1_3:21980499-21980518 Msa0109900:intron 25.0%
!!! ATAGGGTTATTTTTGGAATT+TGG - chr1_3:21980575-21980594 Msa0109900:intron 25.0%
! TGTTTCATAAAACCTTTCAT+TGG - chr1_3:21980925-21980944 Msa0109900:intron 25.0%
! TTCAAAACAACATTAAAGGT+AGG + chr1_3:21980967-21980986 None:intergenic 25.0%
! ACGTTTCAAAACAACATTAA+AGG + chr1_3:21980971-21980990 None:intergenic 25.0%
!!! AGAGTTTTTTGTGAACTTAA+AGG + chr1_3:21981057-21981076 None:intergenic 25.0%
!! TATTTGAGATTGATATGTGA+AGG - chr1_3:21981088-21981107 Msa0109900:intron 25.0%
! CAAAAAAGGTGGTAATAAAT+TGG + chr1_3:21981667-21981686 None:intergenic 25.0%
! GATTGACTACAAAAATATCA+TGG + chr1_3:21981707-21981726 None:intergenic 25.0%
! TGATAACAAATATAAATGGC+AGG + chr1_3:21981800-21981819 None:intergenic 25.0%
! CTATGATCTTATAACTGATA+TGG - chr1_3:21981823-21981842 Msa0109900:intron 25.0%
!!! GAAATGTTTTTCAAATACTG+TGG - chr1_3:21981888-21981907 Msa0109900:intron 25.0%
! TCAAGTAGTAATCTCAAAAT+TGG + chr1_3:21982039-21982058 None:intergenic 25.0%
! AAAATATGCCAAATGCATTA+CGG - chr1_3:21982073-21982092 Msa0109900:intron 25.0%
! TTAGGATTCAGTAATTTGAT+TGG + chr1_3:21982195-21982214 None:intergenic 25.0%
! CATATTACCAAATTGAAACA+TGG + chr1_3:21982247-21982266 None:intergenic 25.0%
! AAGAAAAAAATTGAAGAGAG+AGG - chr1_3:21982386-21982405 Msa0109900:CDS 25.0%
! TGAATTAATGTTAAAACTCG+CGG - chr1_3:21982613-21982632 Msa0109900:CDS 25.0%
! TTCTTAAAATAATAATGCGG+GGG + chr1_3:21982712-21982731 None:intergenic 25.0%
! CTTCTTAAAATAATAATGCG+GGG + chr1_3:21982713-21982732 None:intergenic 25.0%
GAGGGGAAAAATAAAGAAAA+GGG + chr1_3:21972826-21972845 None:intergenic 30.0%
AGAGGGGAAAAATAAAGAAA+AGG + chr1_3:21972827-21972846 None:intergenic 30.0%
AGGTAGAGAAGAAAAAAAGA+GGG + chr1_3:21972844-21972863 None:intergenic 30.0%
GAAGAAGAAGAACAACAAAA+TGG - chr1_3:21973059-21973078 Msa0109900:three_prime_UTR 30.0%
!! TTTTTGAGCTTTTGCTTTCA+TGG + chr1_3:21973100-21973119 None:intergenic 30.0%
TGAACAGAGTAACAAATCTT+CGG - chr1_3:21973263-21973282 Msa0109900:CDS 30.0%
AATCTTCGGAGTTTATTGAT+AGG - chr1_3:21973277-21973296 Msa0109900:CDS 30.0%
ATAAGCCATATATGTAAAGG+TGG - chr1_3:21973571-21973590 Msa0109900:CDS 30.0%
CAAAAGATTAAGACTCTGAT+TGG - chr1_3:21973654-21973673 Msa0109900:CDS 30.0%
!!! CTAATTGAATTTGTCGCTTT+TGG - chr1_3:21973705-21973724 Msa0109900:CDS 30.0%
!!! TTGTCGCTTTTGGTAAAATT+AGG - chr1_3:21973715-21973734 Msa0109900:CDS 30.0%
!!! TGTCGCTTTTGGTAAAATTA+GGG - chr1_3:21973716-21973735 Msa0109900:CDS 30.0%
!!! TTTTTTCAATTGAGGCTACA+AGG - chr1_3:21973800-21973819 Msa0109900:intron 30.0%
!! TTTTTCAATTGAGGCTACAA+GGG - chr1_3:21973801-21973820 Msa0109900:intron 30.0%
TTTAGTCAAATGAGCTTAGA+AGG - chr1_3:21973933-21973952 Msa0109900:intron 30.0%
ACTTATTTGAGCTTATCTAC+TGG - chr1_3:21974017-21974036 Msa0109900:intron 30.0%
!! GTTGTTTTCATGAGATATCT+TGG - chr1_3:21974306-21974325 Msa0109900:intron 30.0%
! TGTTTTCATGAGATATCTTG+GGG - chr1_3:21974308-21974327 Msa0109900:intron 30.0%
TACAATCAAACAAACCCATT+AGG + chr1_3:21974460-21974479 None:intergenic 30.0%
! TGTTATCGCTTTGAGTTTAA+TGG - chr1_3:21974514-21974533 Msa0109900:intron 30.0%
! GTTATCGCTTTGAGTTTAAT+GGG - chr1_3:21974515-21974534 Msa0109900:intron 30.0%
! TTATCGCTTTGAGTTTAATG+GGG - chr1_3:21974516-21974535 Msa0109900:intron 30.0%
CGAAATACTTGATTCTCATT+AGG - chr1_3:21974626-21974645 Msa0109900:intron 30.0%
GGACGAAAATTCAAAAAACA+AGG + chr1_3:21974739-21974758 None:intergenic 30.0%
TTTGAACTCTAATGAGCTAT+TGG - chr1_3:21975021-21975040 Msa0109900:intron 30.0%
AATTATGTGCATGCTGAATT+TGG - chr1_3:21975065-21975084 Msa0109900:intron 30.0%
! TGGTTATTTGTGAACTTTTG+GGG - chr1_3:21975085-21975104 Msa0109900:intron 30.0%
!!! TTTTTTGCTTCTTTTTCTGG+TGG - chr1_3:21975162-21975181 Msa0109900:intron 30.0%
AGATAGAGCAAAATAGAAGA+CGG + chr1_3:21975239-21975258 None:intergenic 30.0%
! AGATTACACAAAGCATTCAT+GGG + chr1_3:21975502-21975521 None:intergenic 30.0%
ATTTCTGTTTGAGTGACTAT+AGG - chr1_3:21975529-21975548 Msa0109900:intron 30.0%
TTTCTGTTTGAGTGACTATA+GGG - chr1_3:21975530-21975549 Msa0109900:intron 30.0%
! TGCAAAAAGCAAGTTTTACA+AGG - chr1_3:21975690-21975709 Msa0109900:intron 30.0%
! CTTTCACTCTAATATTTTCC+AGG - chr1_3:21975781-21975800 Msa0109900:intron 30.0%
TTCAAAGCTTTCATCTTGTT+TGG + chr1_3:21975911-21975930 None:intergenic 30.0%
! AAACAAGATGAAAGCTTTGA+AGG - chr1_3:21975910-21975929 Msa0109900:intron 30.0%
GACAATGAATAATTCTGTTC+AGG - chr1_3:21975994-21976013 Msa0109900:intron 30.0%
!!! TGCCGTTTTTTCTGAAATTA+TGG + chr1_3:21976573-21976592 None:intergenic 30.0%
AAACTATGACTAAAAAGGGT+TGG - chr1_3:21976718-21976737 Msa0109900:intron 30.0%
AACTATGACTAAAAAGGGTT+GGG - chr1_3:21976719-21976738 Msa0109900:intron 30.0%
! AAGATGATGATGATTTGGAA+AGG - chr1_3:21976805-21976824 Msa0109900:CDS 30.0%
! TGATTCTGTTGAAAGTGTAA+AGG - chr1_3:21977061-21977080 Msa0109900:intron 30.0%
! GATTCTGTTGAAAGTGTAAA+GGG - chr1_3:21977062-21977081 Msa0109900:intron 30.0%
TTCGGAGCTTCAATTATATA+AGG + chr1_3:21977155-21977174 None:intergenic 30.0%
CATAATTCTTCAAAGGTCTT+CGG + chr1_3:21977173-21977192 None:intergenic 30.0%
TGAAGAATTATGTTCACTAG+TGG - chr1_3:21977181-21977200 Msa0109900:CDS 30.0%
ACACTATCTTAATCGTCAAT+CGG - chr1_3:21977222-21977241 Msa0109900:CDS 30.0%
!! TATTTACACAGTTGAGTTGA+GGG + chr1_3:21977509-21977528 None:intergenic 30.0%
! ATATTTACACAGTTGAGTTG+AGG + chr1_3:21977510-21977529 None:intergenic 30.0%
CAACTCAACTGTGTAAATAT+AGG - chr1_3:21977510-21977529 Msa0109900:intron 30.0%
TTGAATGAAATCCTAGTTTG+CGG - chr1_3:21977553-21977572 Msa0109900:intron 30.0%
ACAGTAATCAGTCTCATATA+GGG + chr1_3:21977636-21977655 None:intergenic 30.0%
AACAGTAATCAGTCTCATAT+AGG + chr1_3:21977637-21977656 None:intergenic 30.0%
AGACAAACTAAGAGAAATGA+GGG - chr1_3:21977677-21977696 Msa0109900:intron 30.0%
ATGAGAAATCAGAATGAAGA+GGG + chr1_3:21977749-21977768 None:intergenic 30.0%
TATGAGAAATCAGAATGAAG+AGG + chr1_3:21977750-21977769 None:intergenic 30.0%
GTCAGTTTAGCTAATTTAGT+GGG + chr1_3:21977813-21977832 None:intergenic 30.0%
TGTCAGTTTAGCTAATTTAG+TGG + chr1_3:21977814-21977833 None:intergenic 30.0%
GGTATTGTCAATGGAATTAA+TGG + chr1_3:21977925-21977944 None:intergenic 30.0%
! TCAATTTCTACAAGTCTTGT+AGG + chr1_3:21977954-21977973 None:intergenic 30.0%
AAAGAATTGGTCAACAGATA+TGG - chr1_3:21977979-21977998 Msa0109900:intron 30.0%
! TTTTAATGGTTGTTAACCAG+GGG + chr1_3:21978060-21978079 None:intergenic 30.0%
! TAAATCTGAGTATTGCAAAC+TGG + chr1_3:21978309-21978328 None:intergenic 30.0%
AATACCTGAAAAGAGAAGTA+CGG + chr1_3:21978446-21978465 None:intergenic 30.0%
!!! ATTGCAGTATTTTGCTGTTT+TGG - chr1_3:21978478-21978497 Msa0109900:CDS 30.0%
! CATAACTGGATGTCTAAAAT+CGG + chr1_3:21978839-21978858 None:intergenic 30.0%
AGAACATAAGAAAGAACCAA+CGG + chr1_3:21978929-21978948 None:intergenic 30.0%
GTTATAAACGTCGAACTTAA+AGG + chr1_3:21979040-21979059 None:intergenic 30.0%
ACTTCGTTAAATAGTGCTTA+TGG - chr1_3:21979172-21979191 Msa0109900:intron 30.0%
TGGATCATTTAACATTAAGG+TGG - chr1_3:21979192-21979211 Msa0109900:intron 30.0%
TCATTTAACATTAAGGTGGT+AGG - chr1_3:21979196-21979215 Msa0109900:intron 30.0%
GTGGATGTTTAATCTTAAGT+TGG + chr1_3:21979419-21979438 None:intergenic 30.0%
CGATTTCTACCATTAAAAAG+TGG - chr1_3:21979661-21979680 Msa0109900:intron 30.0%
! CTACTAATGAATTTAGCCTT+TGG - chr1_3:21979728-21979747 Msa0109900:CDS 30.0%
AAAAAGATCTTAGAAAGCAG+AGG + chr1_3:21979755-21979774 None:intergenic 30.0%
ATGCCATCAATGAAAAACAT+AGG + chr1_3:21979827-21979846 None:intergenic 30.0%
TTATATTCATTGTGTGAGCA+AGG + chr1_3:21979857-21979876 None:intergenic 30.0%
ACACAATGAATATAAAACGC+AGG - chr1_3:21979862-21979881 Msa0109900:CDS 30.0%
TATATCATGCGAAAATTCTC+AGG - chr1_3:21979967-21979986 Msa0109900:intron 30.0%
ACTAACGAAAAAGAACAAAG+GGG + chr1_3:21980268-21980287 None:intergenic 30.0%
CACTAACGAAAAAGAACAAA+GGG + chr1_3:21980269-21980288 None:intergenic 30.0%
ACACTAACGAAAAAGAACAA+AGG + chr1_3:21980270-21980289 None:intergenic 30.0%
AAAATTTCCATTAGAGACGT+AGG + chr1_3:21980472-21980491 None:intergenic 30.0%
GAGAAACTAATTGCTGAAAA+AGG - chr1_3:21980498-21980517 Msa0109900:intron 30.0%
GAAACTAATTGCTGAAAAAG+GGG - chr1_3:21980500-21980519 Msa0109900:intron 30.0%
ATATTAATGATACGGACTTC+TGG - chr1_3:21980645-21980664 Msa0109900:intron 30.0%
TAATATTAAGTGCGAGATCA+TGG + chr1_3:21980802-21980821 None:intergenic 30.0%
TGTTGGGGTAAAAGTTAATT+AGG + chr1_3:21980848-21980867 None:intergenic 30.0%
TAATGAAACACAATCTGTTG+GGG + chr1_3:21980863-21980882 None:intergenic 30.0%
CTAATGAAACACAATCTGTT+GGG + chr1_3:21980864-21980883 None:intergenic 30.0%
TCTAATGAAACACAATCTGT+TGG + chr1_3:21980865-21980884 None:intergenic 30.0%
!! ACTGATTTTCATCCAATGAA+AGG + chr1_3:21980940-21980959 None:intergenic 30.0%
!! AAACGACACTCATTTTGAAA+CGG + chr1_3:21981166-21981185 None:intergenic 30.0%
!!! TTCAAAATGAGTGTCGTTTT+AGG - chr1_3:21981167-21981186 Msa0109900:intron 30.0%
! TGTGCAGAGTATTAATTAGA+GGG - chr1_3:21981301-21981320 Msa0109900:intron 30.0%
AGAGAGTAATATCATGCATA+TGG - chr1_3:21981424-21981443 Msa0109900:intron 30.0%
ATTATCCAACCATAACATTC+TGG + chr1_3:21981470-21981489 None:intergenic 30.0%
GTTCCATAAGATGATATAAC+TGG + chr1_3:21981518-21981537 None:intergenic 30.0%
! CATTTTTCTTGCAAAAAAGG+TGG + chr1_3:21981678-21981697 None:intergenic 30.0%
TGACTACAAAAATATCATGG+TGG + chr1_3:21981704-21981723 None:intergenic 30.0%
TTGAACAAAGAAAATAGCAG+CGG - chr1_3:21981740-21981759 Msa0109900:intron 30.0%
AAATATGCCAAATGCATTAC+GGG - chr1_3:21982074-21982093 Msa0109900:intron 30.0%
! ATTTTATCCCGTAATGCATT+TGG + chr1_3:21982084-21982103 None:intergenic 30.0%
ACGGGATAAAATTAAAGATG+TGG - chr1_3:21982092-21982111 Msa0109900:intron 30.0%
TTCAGTAATTTGATTGGAAC+TGG + chr1_3:21982189-21982208 None:intergenic 30.0%
ATTACTGAATCCTAAGTTTG+AGG - chr1_3:21982200-21982219 Msa0109900:intron 30.0%
!! ACTTACTTTTCCTCAAACTT+AGG + chr1_3:21982213-21982232 None:intergenic 30.0%
CCAAATTGAAACATGGAAAA+CGG + chr1_3:21982240-21982259 None:intergenic 30.0%
TTAGCCAATCAGATCATAAA+GGG - chr1_3:21982272-21982291 Msa0109900:intron 30.0%
TTGATGTGAAGGAAAAAGAA+AGG - chr1_3:21982466-21982485 Msa0109900:CDS 30.0%
GGAAAAAGAAAGGTCTTTAA+TGG - chr1_3:21982476-21982495 Msa0109900:CDS 30.0%
! CAAGAACATGCTTTTAAATC+TGG - chr1_3:21982549-21982568 Msa0109900:CDS 30.0%
GAATTAATGTTAAAACTCGC+GGG - chr1_3:21982614-21982633 Msa0109900:CDS 30.0%
AATTAATGTTAAAACTCGCG+GGG - chr1_3:21982615-21982634 Msa0109900:CDS 30.0%
! TCGTTTTCTGAATAGAACAT+AGG - chr1_3:21982676-21982695 Msa0109900:CDS 30.0%
GAACATTTCAGTTTAGTTGT+CGG - chr1_3:21982794-21982813 Msa0109900:intron 30.0%
!! ATGTCTGTTTCTAAATAGCA+TGG - chr1_3:21982853-21982872 Msa0109900:five_prime_UTR 30.0%
GGTAGAGAAGAAAAAAAGAG+GGG + chr1_3:21972843-21972862 None:intergenic 35.0%
GAGGTAGAGAAGAAAAAAAG+AGG + chr1_3:21972845-21972864 None:intergenic 35.0%
AATGAGAAAACAATTGCACG+AGG + chr1_3:21972864-21972883 None:intergenic 35.0%
ACGTAGGAAATTCGAAGTAA+TGG - chr1_3:21973152-21973171 Msa0109900:CDS 35.0%
CGTAGGAAATTCGAAGTAAT+GGG - chr1_3:21973153-21973172 Msa0109900:CDS 35.0%
AAAGGAGATACCAAACGAAT+GGG - chr1_3:21973186-21973205 Msa0109900:CDS 35.0%
GAGTTTATTGATAGGCGAAT+CGG - chr1_3:21973285-21973304 Msa0109900:CDS 35.0%
AACGTCAGGTAGTAATAGTA+TGG - chr1_3:21973364-21973383 Msa0109900:CDS 35.0%
ACCAAGCTATTTATCCAAAC+AGG - chr1_3:21974246-21974265 Msa0109900:intron 35.0%
CCAAGCTATTTATCCAAACA+GGG - chr1_3:21974247-21974266 Msa0109900:intron 35.0%
!!! AACTTTATTTTGGCCCTGTT+TGG + chr1_3:21974263-21974282 None:intergenic 35.0%
AGACTGTTTAGGAGAACATA+TGG + chr1_3:21974387-21974406 None:intergenic 35.0%
GTCGCAAGATAAATTCTCAT+TGG + chr1_3:21974561-21974580 None:intergenic 35.0%
GAATTTATCTTGCGACACAA+AGG - chr1_3:21974565-21974584 Msa0109900:intron 35.0%
TATGGTTGTTGACATTGTAG+TGG - chr1_3:21974787-21974806 Msa0109900:intron 35.0%
! GAAGATGATGATGAGTTTGA+AGG - chr1_3:21974852-21974871 Msa0109900:intron 35.0%
GATGAGTTTGAAGGAATTGA+TGG - chr1_3:21974861-21974880 Msa0109900:intron 35.0%
! TTTGAAGGAATTGATGGTCT+TGG - chr1_3:21974867-21974886 Msa0109900:intron 35.0%
TTTGAAGATGAGATGCTTGA+TGG - chr1_3:21974900-21974919 Msa0109900:intron 35.0%
TTAATGGTGTCTTTGCTGAT+TGG - chr1_3:21974987-21975006 Msa0109900:intron 35.0%
!! AACTTTTGGGGATTGAATTC+TGG - chr1_3:21975097-21975116 Msa0109900:intron 35.0%
CAGATAATTCAGATTTGGGT+CGG - chr1_3:21975325-21975344 Msa0109900:intron 35.0%
GCCTGTTATGCTTTCAATTA+TGG - chr1_3:21975416-21975435 Msa0109900:intron 35.0%
! GCCATAATTGAAAGCATAAC+AGG + chr1_3:21975420-21975439 None:intergenic 35.0%
TCTTCTATTACTGCGACTAT+AGG - chr1_3:21975462-21975481 Msa0109900:intron 35.0%
CTTCTATTACTGCGACTATA+GGG - chr1_3:21975463-21975482 Msa0109900:intron 35.0%
! GATTACACAAAGCATTCATG+GGG + chr1_3:21975501-21975520 None:intergenic 35.0%
! CAGATTACACAAAGCATTCA+TGG + chr1_3:21975503-21975522 None:intergenic 35.0%
GTCACTCAAACAGAAATAAC+TGG + chr1_3:21975526-21975545 None:intergenic 35.0%
!!! TCTTGGTTTTATGTCTCTGT+AGG + chr1_3:21975648-21975667 None:intergenic 35.0%
ACAGAGACATAAAACCAAGA+AGG - chr1_3:21975648-21975667 Msa0109900:intron 35.0%
TAAAACCAAGAAGGAAGTGA+TGG - chr1_3:21975657-21975676 Msa0109900:intron 35.0%
!!! TTTCTTTTGCTTTTTCAGCC+TGG + chr1_3:21975802-21975821 None:intergenic 35.0%
GGCTGAAAAAGCAAAAGAAA+AGG - chr1_3:21975802-21975821 Msa0109900:intron 35.0%
GAATCCTCGAGGATAAATAA+TGG + chr1_3:21976022-21976041 None:intergenic 35.0%
!! ACAAGTTGGTCATATTCATC+AGG + chr1_3:21976114-21976133 None:intergenic 35.0%
CATTAACTGATCTCCAATCT+TGG - chr1_3:21976316-21976335 Msa0109900:intron 35.0%
AACCATCTTAAAACGAAGCT+GGG + chr1_3:21976350-21976369 None:intergenic 35.0%
AAACCATCTTAAAACGAAGC+TGG + chr1_3:21976351-21976370 None:intergenic 35.0%
! GATCTTGGTTTCTCTTTTGA+TGG + chr1_3:21976654-21976673 None:intergenic 35.0%
AGTCATAGTTTCTTCATCGA+CGG + chr1_3:21976709-21976728 None:intergenic 35.0%
TCTTCTAGTGAAGATGATGA+TGG - chr1_3:21976780-21976799 Msa0109900:CDS 35.0%
! TGGTGAAGATGATGATGATT+TGG - chr1_3:21976800-21976819 Msa0109900:CDS 35.0%
! GAAAGTGTAAAGGGAGATAA+TGG - chr1_3:21977071-21977090 Msa0109900:intron 35.0%
AATGCCAAGAAGATAGTCAT+TGG - chr1_3:21977101-21977120 Msa0109900:CDS 35.0%
TCTTAATCGTCAATCGGATT+CGG - chr1_3:21977228-21977247 Msa0109900:CDS 35.0%
AAACATGAATACAAGCACCA+TGG + chr1_3:21977348-21977367 None:intergenic 35.0%
CACTTCTCATGTAAAACAGT+CGG + chr1_3:21977381-21977400 None:intergenic 35.0%
AACAAAGTAATCCGCAAACT+AGG + chr1_3:21977567-21977586 None:intergenic 35.0%
!! TTAGTTTGTCTGAGTCTAAC+AGG + chr1_3:21977668-21977687 None:intergenic 35.0%
CAGACAAACTAAGAGAAATG+AGG - chr1_3:21977676-21977695 Msa0109900:intron 35.0%
AGAGAGACTAAGAGAAATGA+GGG - chr1_3:21977711-21977730 Msa0109900:intron 35.0%
ATTCCATTGACAATACCTAC+TGG - chr1_3:21977928-21977947 Msa0109900:intron 35.0%
ATGTTGTCTGATGTATTGCA+AGG - chr1_3:21978199-21978218 Msa0109900:intron 35.0%
AAAAGAATGCAAACAACCAC+AGG + chr1_3:21978276-21978295 None:intergenic 35.0%
! TGAGTATTGCAAACTGGATT+TGG + chr1_3:21978303-21978322 None:intergenic 35.0%
! ATAACCGTACTTCTCTTTTC+AGG - chr1_3:21978439-21978458 Msa0109900:CDS 35.0%
ACCATTGATAGAGATGAGTA+CGG - chr1_3:21978547-21978566 Msa0109900:CDS 35.0%
CACATATTGCAGCAAAGTAT+GGG + chr1_3:21978577-21978596 None:intergenic 35.0%
! GTTGAGAGTATAAAAAACGG+AGG - chr1_3:21978632-21978651 Msa0109900:CDS 35.0%
GATAAAAGTTAAGGCAGAGA+CGG + chr1_3:21978685-21978704 None:intergenic 35.0%
!! AGAAATTAACTTGCCACACA+AGG + chr1_3:21978971-21978990 None:intergenic 35.0%
ATTCATCGCTCTCAAAACTA+GGG + chr1_3:21979387-21979406 None:intergenic 35.0%
AATTCATCGCTCTCAAAACT+AGG + chr1_3:21979388-21979407 None:intergenic 35.0%
!!! AGTTTTGAGAGCGATGAATT+TGG - chr1_3:21979388-21979407 Msa0109900:intron 35.0%
!! CACATGCACACTTTTTAACT+GGG - chr1_3:21979436-21979455 Msa0109900:intron 35.0%
GTTATCACCATTCACCAATA+AGG - chr1_3:21979620-21979639 Msa0109900:intron 35.0%
ATCAGATCCTTATTGGTGAA+TGG + chr1_3:21979630-21979649 None:intergenic 35.0%
TGCTTTCATCAGATCCTTAT+TGG + chr1_3:21979637-21979656 None:intergenic 35.0%
CAATGAAAAACATAGGCCAA+AGG + chr1_3:21979820-21979839 None:intergenic 35.0%
! TGGCCTATGTTTTTCATTGA+TGG - chr1_3:21979821-21979840 Msa0109900:CDS 35.0%
TTATCTCATCCAACTAAGTG+TGG + chr1_3:21980127-21980146 None:intergenic 35.0%
AGCACTAGTGTTAAGGAATT+TGG + chr1_3:21980172-21980191 None:intergenic 35.0%
AACGATTAGCACTAGTGTTA+AGG + chr1_3:21980179-21980198 None:intergenic 35.0%
GTTTACGGAAGCAAATAATG+AGG - chr1_3:21980359-21980378 Msa0109900:CDS 35.0%
GGAAGCAAATAATGAGGAAA+GGG - chr1_3:21980365-21980384 Msa0109900:CDS 35.0%
AATTCAGCAAGCAAATCAAG+AGG + chr1_3:21980415-21980434 None:intergenic 35.0%
TAAGCATAGATCAGGTAGTA+AGG + chr1_3:21980448-21980467 None:intergenic 35.0%
! CTCTAATGGAAATTTTGCCA+AGG - chr1_3:21980476-21980495 Msa0109900:intron 35.0%
! TTCAGCAATTAGTTTCTCCT+TGG + chr1_3:21980496-21980515 None:intergenic 35.0%
AATTGATGTCCGTGACAAAA+AGG - chr1_3:21980889-21980908 Msa0109900:CDS 35.0%
! TCACTTCATCCTTTTTGTCA+CGG + chr1_3:21980901-21980920 None:intergenic 35.0%
! GTGTGCAGAGTATTAATTAG+AGG - chr1_3:21981300-21981319 Msa0109900:intron 35.0%
!! AAGCGACACTCATTTTGAAA+CGG - chr1_3:21981401-21981420 Msa0109900:intron 35.0%
CTGGCAGAAAACAAACAATA+TGG + chr1_3:21981499-21981518 None:intergenic 35.0%
CTGCCAGTTATATCATCTTA+TGG - chr1_3:21981512-21981531 Msa0109900:intron 35.0%
AAACTGTCAGTAGTGAAGAA+TGG + chr1_3:21981636-21981655 None:intergenic 35.0%
TGAACAAAGAAAATAGCAGC+GGG - chr1_3:21981741-21981760 Msa0109900:intron 35.0%
!! GGCATTGATATATCCTTGTA+GGG + chr1_3:21981980-21981999 None:intergenic 35.0%
!! AGGCATTGATATATCCTTGT+AGG + chr1_3:21981981-21982000 None:intergenic 35.0%
GAACGAACTCAAGTTATCAT+AGG + chr1_3:21982001-21982020 None:intergenic 35.0%
!! TGAGCTGATTAAGTTGAAAG+TGG - chr1_3:21982116-21982135 Msa0109900:intron 35.0%
TGGATGAACATCATACTTTG+AGG - chr1_3:21982136-21982155 Msa0109900:intron 35.0%
!! TTTTGTTTCCGCATTTGAAG+TGG + chr1_3:21982165-21982184 None:intergenic 35.0%
ATTGAAACATGGAAAACGGA+AGG + chr1_3:21982236-21982255 None:intergenic 35.0%
! CCGTTTTCCATGTTTCAATT+TGG - chr1_3:21982237-21982256 Msa0109900:intron 35.0%
CTTAGCCAATCAGATCATAA+AGG - chr1_3:21982271-21982290 Msa0109900:intron 35.0%
AGTTCCCTTTATGATCTGAT+TGG + chr1_3:21982279-21982298 None:intergenic 35.0%
TTCTTGATGCAGCTATGTTA+AGG - chr1_3:21982329-21982348 Msa0109900:intron 35.0%
TCTTGATGCAGCTATGTTAA+GGG - chr1_3:21982330-21982349 Msa0109900:intron 35.0%
AAAAATTGAAGAGAGAGGTG+AGG - chr1_3:21982391-21982410 Msa0109900:CDS 35.0%
! GCTTTTAAATCTGGACAACT+AGG - chr1_3:21982558-21982577 Msa0109900:CDS 35.0%
AAATCTGGACAACTAGGAAA+AGG - chr1_3:21982564-21982583 Msa0109900:CDS 35.0%
GATAGTCACTTACAAAGTCA+TGG + chr1_3:21982752-21982771 None:intergenic 35.0%
TAGAAACAGACATTCGTAGT+TGG + chr1_3:21982846-21982865 None:intergenic 35.0%
GTGTCTGCTAAGTAAAATGT+TGG - chr1_3:21982884-21982903 Msa0109900:five_prime_UTR 35.0%
CTCAAAACCAAACCCAACAA+TGG - chr1_3:21972966-21972985 Msa0109900:three_prime_UTR 40.0%
TGGATGATTTCGCCATTGTT+GGG + chr1_3:21972981-21973000 None:intergenic 40.0%
TTGGATGATTTCGCCATTGT+TGG + chr1_3:21972982-21973001 None:intergenic 40.0%
GTTGTTCTTCTTCTTCTTGC+TGG + chr1_3:21973055-21973074 None:intergenic 40.0%
GAAAGGAGATACCAAACGAA+TGG - chr1_3:21973185-21973204 Msa0109900:CDS 40.0%
AAGGAGATACCAAACGAATG+GGG - chr1_3:21973187-21973206 Msa0109900:CDS 40.0%
!! GTTCTCTTGCTATTGAGAAG+AGG - chr1_3:21973217-21973236 Msa0109900:CDS 40.0%
GAGGAAGAAGACACTTCTTA+AGG - chr1_3:21973236-21973255 Msa0109900:CDS 40.0%
GAATCGGTGAGAATGATGAA+GGG - chr1_3:21973301-21973320 Msa0109900:CDS 40.0%
!! GATGAAGGGCTTGATGATTT+TGG - chr1_3:21973315-21973334 Msa0109900:CDS 40.0%
TCAATCTAAACAGGCTCTCT+GGG + chr1_3:21973998-21974017 None:intergenic 40.0%
CCCTGTTTGGATAAATAGCT+TGG + chr1_3:21974250-21974269 None:intergenic 40.0%
TGGGGACCTTGATGAAAATA+AGG - chr1_3:21974326-21974345 Msa0109900:intron 40.0%
! CAAGCTTTGTGAGACTGTTT+AGG + chr1_3:21974398-21974417 None:intergenic 40.0%
! AAGGAATTGATGGTCTTGGA+AGG - chr1_3:21974871-21974890 Msa0109900:intron 40.0%
! AGGAATTGATGGTCTTGGAA+GGG - chr1_3:21974872-21974891 Msa0109900:intron 40.0%
! TGTCTTTGCTGATTGGAACT+TGG - chr1_3:21974994-21975013 Msa0109900:intron 40.0%
AGAAAGCTTGAGAACTCCTT+AGG + chr1_3:21975123-21975142 None:intergenic 40.0%
TGAGTGACTATAGGGAATCT+TGG - chr1_3:21975538-21975557 Msa0109900:intron 40.0%
AGATAAGGACTTCACTTCTC+TGG - chr1_3:21975853-21975872 Msa0109900:intron 40.0%
! AAGATGGCTTGTCTGCTAAA+CGG - chr1_3:21975972-21975991 Msa0109900:intron 40.0%
GGTACCATTATTTATCCTCG+AGG - chr1_3:21976015-21976034 Msa0109900:intron 40.0%
TCCAACTTTCTCTTTATGGC+AGG - chr1_3:21976083-21976102 Msa0109900:intron 40.0%
TCCTGCCATAAAGAGAAAGT+TGG + chr1_3:21976087-21976106 None:intergenic 40.0%
TGACCAACTTGTCAGACAAA+TGG - chr1_3:21976122-21976141 Msa0109900:intron 40.0%
GACCAACTTGTCAGACAAAT+GGG - chr1_3:21976123-21976142 Msa0109900:intron 40.0%
ATCCCATTTGTCTGACAAGT+TGG + chr1_3:21976128-21976147 None:intergenic 40.0%
AAGAGAACATCTAGAGGAGT+TGG - chr1_3:21976209-21976228 Msa0109900:intron 40.0%
CTGGGATATACAACCAAGAT+TGG + chr1_3:21976332-21976351 None:intergenic 40.0%
!!! ATCCCAGCTTCGTTTTAAGA+TGG - chr1_3:21976345-21976364 Msa0109900:intron 40.0%
! TTGGTGATAGTCGTGGAAAT+GGG - chr1_3:21976478-21976497 Msa0109900:intron 40.0%
TGCACATGGGAGTAAAATTG+TGG - chr1_3:21976506-21976525 Msa0109900:intron 40.0%
TTCAGAAAAAACGGCAGAAG+AGG - chr1_3:21976577-21976596 Msa0109900:intron 40.0%
AGGTCTGAAGATTCTGATGA+TGG - chr1_3:21976825-21976844 Msa0109900:CDS 40.0%
!! AGATTCTGATGATGGATCAG+AGG - chr1_3:21976833-21976852 Msa0109900:CDS 40.0%
! GATGATGATGATATCAGTGC+AGG - chr1_3:21976909-21976928 Msa0109900:CDS 40.0%
TACCTTATCAACTTCTTCCG+CGG + chr1_3:21977000-21977019 None:intergenic 40.0%
CCAAGAAGATAGTCATTGGA+GGG - chr1_3:21977105-21977124 Msa0109900:CDS 40.0%
AGGGAAAATGTCGAAAGAGT+TGG - chr1_3:21977124-21977143 Msa0109900:CDS 40.0%
! TTTTCTGCAGCAAGTGTGAT+TGG + chr1_3:21977263-21977282 None:intergenic 40.0%
TTCTCATGTAAAACAGTCGG+TGG + chr1_3:21977378-21977397 None:intergenic 40.0%
CAGAGAGACTAAGAGAAATG+AGG - chr1_3:21977710-21977729 Msa0109900:intron 40.0%
CAGATATGGTACACAGCTAA+CGG - chr1_3:21977993-21978012 Msa0109900:intron 40.0%
AGATATGGTACACAGCTAAC+GGG - chr1_3:21977994-21978013 Msa0109900:intron 40.0%
TCCGTACTCATCTCTATCAA+TGG + chr1_3:21978551-21978570 None:intergenic 40.0%
GCACATATTGCAGCAAAGTA+TGG + chr1_3:21978578-21978597 None:intergenic 40.0%
CTATCACAGAAAGTAGCAGT+TGG - chr1_3:21978758-21978777 Msa0109900:CDS 40.0%
ATCGGAACATGGAAATACCA+TGG + chr1_3:21978821-21978840 None:intergenic 40.0%
! GGATGTCTAAAATCGGAACA+TGG + chr1_3:21978832-21978851 None:intergenic 40.0%
AGTATCACAGGAGTCATAAC+TGG + chr1_3:21978853-21978872 None:intergenic 40.0%
TCGCACATCAATAGTATCAC+AGG + chr1_3:21978865-21978884 None:intergenic 40.0%
TATCACGGCCAGATGTTATT+GGG + chr1_3:21978903-21978922 None:intergenic 40.0%
ATATCACGGCCAGATGTTAT+TGG + chr1_3:21978904-21978923 None:intergenic 40.0%
AAGAACCAACGGCAATATCA+CGG + chr1_3:21978918-21978937 None:intergenic 40.0%
CTCTCAAAACTAGGGTTCAT+AGG + chr1_3:21979379-21979398 None:intergenic 40.0%
! CCAGTTAAAAAGTGTGCATG+TGG + chr1_3:21979438-21979457 None:intergenic 40.0%
!! CCACATGCACACTTTTTAAC+TGG - chr1_3:21979435-21979454 Msa0109900:intron 40.0%
CTAACTTAAAGGACTGCAGA+TGG - chr1_3:21979554-21979573 Msa0109900:CDS 40.0%
AAAGGACTGCAGATGGTATT+TGG - chr1_3:21979561-21979580 Msa0109900:CDS 40.0%
!!! GGTAGGATGCCACTTTTTAA+TGG + chr1_3:21979673-21979692 None:intergenic 40.0%
GATGTTCGCTATATAGCCTT+TGG - chr1_3:21979801-21979820 Msa0109900:CDS 40.0%
ATCGTTGTTGTCGAACAAAC+TGG - chr1_3:21980193-21980212 Msa0109900:intron 40.0%
CGGAAGCAAATAATGAGGAA+AGG - chr1_3:21980364-21980383 Msa0109900:CDS 40.0%
! GAAAGGGCATGATCTTATGT+GGG - chr1_3:21980381-21980400 Msa0109900:CDS 40.0%
ACGTAGGTTAAGCATAGATC+AGG + chr1_3:21980456-21980475 None:intergenic 40.0%
TGCTTAACCTACGTCTCTAA+TGG - chr1_3:21980462-21980481 Msa0109900:intron 40.0%
TATCATGCAGGAACTAGCTA+AGG + chr1_3:21981133-21981152 None:intergenic 40.0%
!!! GACACTCATTTTGAAACGGA+GGG + chr1_3:21981405-21981424 None:intergenic 40.0%
ATGATGGCACCAGAATGTTA+TGG - chr1_3:21981458-21981477 Msa0109900:intron 40.0%
TCCTCATTAATGCGCAATAG+TGG + chr1_3:21981555-21981574 None:intergenic 40.0%
AGTGAAGAATGGAGAGTCTT+CGG + chr1_3:21981625-21981644 None:intergenic 40.0%
TCTTCACTACTGACAGTTTC+AGG - chr1_3:21981637-21981656 Msa0109900:intron 40.0%
GAACAAAGAAAATAGCAGCG+GGG - chr1_3:21981742-21981761 Msa0109900:intron 40.0%
TATGGATGCAGCTAATGTTG+AGG - chr1_3:21981841-21981860 Msa0109900:intron 40.0%
! TTTTTCTTTCAGCTCGCTCA+CGG + chr1_3:21982374-21982393 None:intergenic 40.0%
CTACTTCTTGCTTGATGTGA+AGG - chr1_3:21982455-21982474 Msa0109900:CDS 40.0%
AAAGCAAGAGCTGAGAAGTA+TGG - chr1_3:21982501-21982520 Msa0109900:CDS 40.0%
ATGTTCTTGCTCTTGAAGGA+AGG + chr1_3:21982538-21982557 None:intergenic 40.0%
AAGCATGTTCTTGCTCTTGA+AGG + chr1_3:21982542-21982561 None:intergenic 40.0%
GAAATGTTCAGATTCTCTCG+AGG + chr1_3:21982783-21982802 None:intergenic 40.0%
!! CAAAGGTGCTGGACAAGAAA+CGG + chr1_3:21972943-21972962 None:intergenic 45.0%
!!! GGTTTGGTTTTGAGCAGCAA+AGG + chr1_3:21972960-21972979 None:intergenic 45.0%
GATTTCGCCATTGTTGGGTT+TGG + chr1_3:21972976-21972995 None:intergenic 45.0%
GTTGTTGCTGCTAGTTCCAT+TGG + chr1_3:21973016-21973035 None:intergenic 45.0%
!! GTGACCAGATTGACTCGAAT+GGG + chr1_3:21973134-21973153 None:intergenic 45.0%
!! TCGAAGTAATGGGTCAGAAG+CGG - chr1_3:21973163-21973182 Msa0109900:CDS 45.0%
AGATACCAAACGAATGGGGT+TGG - chr1_3:21973191-21973210 Msa0109900:CDS 45.0%
CGAATCGGTGAGAATGATGA+AGG - chr1_3:21973300-21973319 Msa0109900:CDS 45.0%
GTCAATCTAAACAGGCTCTC+TGG + chr1_3:21973999-21974018 None:intergenic 45.0%
TGAATCCAAACGGGTCCTAA+TGG - chr1_3:21974442-21974461 Msa0109900:intron 45.0%
GAATCCAAACGGGTCCTAAT+GGG - chr1_3:21974443-21974462 Msa0109900:intron 45.0%
!! GCTTTGAAGCTGTTTCTGAC+CGG - chr1_3:21975614-21975633 Msa0109900:intron 45.0%
GTCTCTGTAGGATAAGTCAC+CGG + chr1_3:21975636-21975655 None:intergenic 45.0%
TTCGTCCATCACTTCCTTCT+TGG + chr1_3:21975665-21975684 None:intergenic 45.0%
GGAAAAAGATGAAGACCTGC+TGG - chr1_3:21975823-21975842 Msa0109900:intron 45.0%
AAAGATGAAGACCTGCTGGA+AGG - chr1_3:21975827-21975846 Msa0109900:intron 45.0%
CCTTATCTAATCCTTCCAGC+AGG + chr1_3:21975841-21975860 None:intergenic 45.0%
CCTGCTGGAAGGATTAGATA+AGG - chr1_3:21975838-21975857 Msa0109900:intron 45.0%
!! GATGAAAGCTTTGAAGGCTC+TGG - chr1_3:21975916-21975935 Msa0109900:intron 45.0%
GACTCAGGAAGAGATTGATC+AGG - chr1_3:21976182-21976201 Msa0109900:intron 45.0%
TCAGGAAGAGATTGATCAGG+AGG - chr1_3:21976185-21976204 Msa0109900:intron 45.0%
GGAGGAAAGAGAACATCTAG+AGG - chr1_3:21976203-21976222 Msa0109900:intron 45.0%
AGAACATCTAGAGGAGTTGG+AGG - chr1_3:21976212-21976231 Msa0109900:intron 45.0%
GCCAACAACCTTACAAGTGA+CGG + chr1_3:21976441-21976460 None:intergenic 45.0%
GACTATCACCAAGAACCACA+GGG + chr1_3:21976470-21976489 None:intergenic 45.0%
! CTTGGTGATAGTCGTGGAAA+TGG - chr1_3:21976477-21976496 Msa0109900:intron 45.0%
TTCACTCGAATCTTCAGCAG+CGG + chr1_3:21976607-21976626 None:intergenic 45.0%
GAGAAACCAAGATCTCTCTC+TGG - chr1_3:21976660-21976679 Msa0109900:intron 45.0%
TCATCACCAGAGAGAGATCT+TGG + chr1_3:21976669-21976688 None:intergenic 45.0%
AGTTTCTTCATCGACGGAGA+AGG + chr1_3:21976703-21976722 None:intergenic 45.0%
TCTCGAGAGAAGAGATGAAG+AGG - chr1_3:21976752-21976771 Msa0109900:intron 45.0%
GAGAGAAGAGATGAAGAGGA+GGG - chr1_3:21976756-21976775 Msa0109900:intron 45.0%
GAAGACGATGATATCAGTGC+TGG - chr1_3:21976942-21976961 Msa0109900:CDS 45.0%
TGGTTCAGAAGACGAAGATG+AGG - chr1_3:21976962-21976981 Msa0109900:intron 45.0%
GCCAAGAAGATAGTCATTGG+AGG - chr1_3:21977104-21977123 Msa0109900:CDS 45.0%
CCCTCCAATGACTATCTTCT+TGG + chr1_3:21977108-21977127 None:intergenic 45.0%
! ACATGAGAAGTGCGATCTCT+TGG - chr1_3:21977389-21977408 Msa0109900:intron 45.0%
GTCTGAGTCTAACAGGTATG+AGG + chr1_3:21977661-21977680 None:intergenic 45.0%
! AGGCCAGTAGGTATTGTCAA+TGG + chr1_3:21977934-21977953 None:intergenic 45.0%
! TACAAGTCTTGTAGGCCAGT+AGG + chr1_3:21977946-21977965 None:intergenic 45.0%
GATATGGTACACAGCTAACG+GGG - chr1_3:21977995-21978014 Msa0109900:intron 45.0%
! AGACACAGCGTCTTTGAAGA+AGG + chr1_3:21978784-21978803 None:intergenic 45.0%
TCTATTGCGATTGTGGTCCA+TGG - chr1_3:21978801-21978820 Msa0109900:CDS 45.0%
ATGCGTTGCCCAATAACATC+TGG - chr1_3:21978892-21978911 Msa0109900:CDS 45.0%
CTCTCTGTAAGTACCTTGTG+TGG - chr1_3:21978955-21978974 Msa0109900:CDS 45.0%
CTTAGAAAGCAGAGGACCAA+AGG + chr1_3:21979747-21979766 None:intergenic 45.0%
TAGCGTCTTCCACACTTAGT+TGG - chr1_3:21980115-21980134 Msa0109900:intron 45.0%
!! TCGAACAAACTGGTGTTGCT+TGG - chr1_3:21980203-21980222 Msa0109900:intron 45.0%
! GGAAAGGGCATGATCTTATG+TGG - chr1_3:21980380-21980399 Msa0109900:CDS 45.0%
! GGAGGGAGTATATATCATGC+AGG + chr1_3:21981145-21981164 None:intergenic 45.0%
!!! CGACACTCATTTTGAAACGG+AGG + chr1_3:21981404-21981423 None:intergenic 45.0%
!! TATGGTGCTGTACCTCATGA+TGG - chr1_3:21981442-21981461 Msa0109900:intron 45.0%
!! AACATTCTGGTGCCATCATG+AGG + chr1_3:21981457-21981476 None:intergenic 45.0%
TGGCACCAGAATGTTATGGT+TGG - chr1_3:21981462-21981481 Msa0109900:intron 45.0%
GCCACTATTGCGCATTAATG+AGG - chr1_3:21981551-21981570 Msa0109900:intron 45.0%
GTGAAGAATGGAGAGTCTTC+GGG + chr1_3:21981624-21981643 None:intergenic 45.0%
TCCTTGTAGGGTTTCAACAG+CGG + chr1_3:21981968-21981987 None:intergenic 45.0%
! CAAGAGCTGAGAAGTATGGA+AGG - chr1_3:21982505-21982524 Msa0109900:CDS 45.0%
!! AAATATTTATATGTAAAATT+TGG + chr1_3:21979292-21979311 None:intergenic 5.0%
GCGGGTGAAGAAGAAGAAGA+AGG + chr1_3:21972918-21972937 None:intergenic 50.0%
!! GTTTTGAGCAGCAAAGGTGC+TGG + chr1_3:21972954-21972973 None:intergenic 50.0%
CAACAAAATGGGTCCCGAAG+CGG - chr1_3:21973071-21973090 Msa0109900:three_prime_UTR 50.0%
TGCTTTCATGGCTACCGCTT+CGG + chr1_3:21973088-21973107 None:intergenic 50.0%
!! CCAGATTGACTCGAATGGGT+TGG + chr1_3:21973130-21973149 None:intergenic 50.0%
CCAACCCATTCGAGTCAATC+TGG - chr1_3:21973127-21973146 Msa0109900:exon 50.0%
!! CGTGACCAGATTGACTCGAA+TGG + chr1_3:21973135-21973154 None:intergenic 50.0%
TCGAGTCAATCTGGTCACGT+AGG - chr1_3:21973136-21973155 Msa0109900:CDS 50.0%
!! GTAATGGGTCAGAAGCGGAA+AGG - chr1_3:21973168-21973187 Msa0109900:CDS 50.0%
! ACAGGCTCTCTGGGTTTGTT+TGG + chr1_3:21973989-21974008 None:intergenic 50.0%
CAAACCCATTAGGACCCGTT+TGG + chr1_3:21974450-21974469 None:intergenic 50.0%
GGGGATTGAATTCTGGCCTA+AGG - chr1_3:21975104-21975123 Msa0109900:intron 50.0%
! CACTTCTCTGGCTCATTCTG+AGG - chr1_3:21975865-21975884 Msa0109900:intron 50.0%
TGGTTCAGTCAGAGCCAACA+AGG + chr1_3:21975891-21975910 None:intergenic 50.0%
GAGTCTTCCGCCTATCTGAA+GGG + chr1_3:21976167-21976186 None:intergenic 50.0%
TGAGTCTTCCGCCTATCTGA+AGG + chr1_3:21976168-21976187 None:intergenic 50.0%
TTCAGATAGGCGGAAGACTC+AGG - chr1_3:21976167-21976186 Msa0109900:intron 50.0%
TGTTGACAACGAGTGAGCCT+TGG - chr1_3:21976410-21976429 Msa0109900:intron 50.0%
TACAAGTGACGGCATTGCCA+AGG + chr1_3:21976430-21976449 None:intergenic 50.0%
TGGCAATGCCGTCACTTGTA+AGG - chr1_3:21976430-21976449 Msa0109900:intron 50.0%
GCCGTCACTTGTAAGGTTGT+TGG - chr1_3:21976437-21976456 Msa0109900:intron 50.0%
!! GTTGTTGGCTTGTAACCCTG+TGG - chr1_3:21976452-21976471 Msa0109900:intron 50.0%
GCTTGTAACCCTGTGGTTCT+TGG - chr1_3:21976459-21976478 Msa0109900:intron 50.0%
CGACTATCACCAAGAACCAC+AGG + chr1_3:21976471-21976490 None:intergenic 50.0%
! GTGGTTCTTGGTGATAGTCG+TGG - chr1_3:21976471-21976490 Msa0109900:intron 50.0%
! GAAATGGGCTCTCTGCACAT+GGG - chr1_3:21976493-21976512 Msa0109900:intron 50.0%
! TCTCTCTCTGGTGATGACCT+TGG - chr1_3:21976672-21976691 Msa0109900:intron 50.0%
CGAGAGAAGAGATGAAGAGG+AGG - chr1_3:21976755-21976774 Msa0109900:intron 50.0%
TGAGGATGAAGAAAGAGCCG+CGG - chr1_3:21976980-21976999 Msa0109900:intron 50.0%
!! AGCCGCGGAAGAAGTTGATA+AGG - chr1_3:21976995-21977014 Msa0109900:intron 50.0%
! ATGTAGAAAGCACGTGCCTG+TGG - chr1_3:21978257-21978276 Msa0109900:intron 50.0%
CGCTGTGTCTATTGCGATTG+TGG - chr1_3:21978794-21978813 Msa0109900:CDS 50.0%
TGTAGGCCAAATATCTCCCG+CGG - chr1_3:21979013-21979032 Msa0109900:CDS 50.0%
AAAGGACCGCGGGAGATATT+TGG + chr1_3:21979022-21979041 None:intergenic 50.0%
ACGTCGAACTTAAAGGACCG+CGG + chr1_3:21979033-21979052 None:intergenic 50.0%
AGACGCTAGCACACAAGATG+AGG + chr1_3:21980103-21980122 None:intergenic 50.0%
TTGCTGAAAAAGGGGAGCAG+AGG - chr1_3:21980508-21980527 Msa0109900:intron 50.0%
ACCGCTGTTGAAACCCTACA+AGG - chr1_3:21981964-21981983 Msa0109900:intron 50.0%
TGAGGCGACCACTTCAAATG+CGG - chr1_3:21982154-21982173 Msa0109900:intron 50.0%
!! AGGTGCTGGACAAGAAACGG+CGG + chr1_3:21972940-21972959 None:intergenic 55.0%
TCCAAACGCAGCATCGCCAA+TGG - chr1_3:21972997-21973016 Msa0109900:three_prime_UTR 55.0%
TCCATTGGCGATGCTGCGTT+TGG + chr1_3:21973001-21973020 None:intergenic 55.0%
GCTTTCATGGCTACCGCTTC+GGG + chr1_3:21973087-21973106 None:intergenic 55.0%
ACGAGCCAACCCCATTCGTT+TGG + chr1_3:21973199-21973218 None:intergenic 55.0%
GCTCGTAGTATGCAGAGTCC+AGG - chr1_3:21975357-21975376 Msa0109900:intron 55.0%
! CCCTACATTTTCCCCACCGT+CGG + chr1_3:21975397-21975416 None:intergenic 55.0%
CCGACGGTGGGGAAAATGTA+GGG - chr1_3:21975394-21975413 Msa0109900:intron 55.0%
!! GGCTCATTCTGAGGCCTTGT+TGG - chr1_3:21975874-21975893 Msa0109900:intron 55.0%
CAGGGCAAGAAGAATCCTCG+AGG + chr1_3:21976033-21976052 None:intergenic 55.0%
! GGAAATGGGCTCTCTGCACA+TGG - chr1_3:21976492-21976511 Msa0109900:intron 55.0%
! TTTCTAGGAGACTGCTCCCC+TGG - chr1_3:21978041-21978060 Msa0109900:intron 55.0%
TCTGGCCGTGATATTGCCGT+TGG - chr1_3:21978910-21978929 Msa0109900:CDS 55.0%
CGTCGAACTTAAAGGACCGC+GGG + chr1_3:21979032-21979051 None:intergenic 55.0%
CGCTAGCACACAAGATGAGG+AGG + chr1_3:21980100-21980119 None:intergenic 55.0%
TGAAAAAGGGGAGCAGAGGC+AGG - chr1_3:21980512-21980531 Msa0109900:intron 55.0%
AGGTGAGGCGCGAAGCTAAA+GGG - chr1_3:21982406-21982425 Msa0109900:CDS 55.0%
TGCTGGACAAGAAACGGCGG+CGG + chr1_3:21972937-21972956 None:intergenic 60.0%
GAGATCGCAGCGTGAACGTC+AGG - chr1_3:21973350-21973369 Msa0109900:CDS 60.0%
ATGCAGAGTCCAGGCGAAGC+TGG - chr1_3:21975366-21975385 Msa0109900:intron 60.0%
GCCGACGGTGGGGAAAATGT+AGG - chr1_3:21975393-21975412 Msa0109900:intron 60.0%
TGCGTGCTCGCCCTTCAGAT+AGG - chr1_3:21976154-21976173 Msa0109900:intron 60.0%
GTGCTCGCCCTTCAGATAGG+CGG - chr1_3:21976157-21976176 Msa0109900:intron 60.0%
CGACGGAGAAGGAATCGCCA+AGG + chr1_3:21976692-21976711 None:intergenic 60.0%
GAGCAGAGGCAGGTTGTGCA+AGG - chr1_3:21980522-21980541 Msa0109900:intron 60.0%
CTTTCAGCTCGCTCACGGTC+TGG + chr1_3:21982369-21982388 None:intergenic 60.0%
GAGGTGAGGCGCGAAGCTAA+AGG - chr1_3:21982405-21982424 Msa0109900:CDS 60.0%
GGTGAGGCGCGAAGCTAAAG+GGG - chr1_3:21982407-21982426 Msa0109900:CDS 60.0%
GCTGGACAAGAAACGGCGGC+GGG + chr1_3:21972936-21972955 None:intergenic 65.0%
AAGCTGGCGTAGCCGACGGT+GGG - chr1_3:21975382-21975401 Msa0109900:intron 65.0%
TCGGCTACGCCAGCTTCGCC+TGG + chr1_3:21975378-21975397 None:intergenic 70.0%
GGCGAAGCTGGCGTAGCCGA+CGG - chr1_3:21975378-21975397 Msa0109900:intron 70.0%
GAAGCTGGCGTAGCCGACGG+TGG - chr1_3:21975381-21975400 Msa0109900:intron 70.0%
AGCTGGCGTAGCCGACGGTG+GGG - chr1_3:21975383-21975402 Msa0109900:intron 70.0%
Chromosome Type Strat End Strand Name
chr1_3 gene 21972821 21982916 21972821 ID=Msa0109900;Name=Msa0109900
chr1_3 mRNA 21972821 21982916 21972821 ID=Msa0109900-mRNA-1;Parent=Msa0109900;Name=Msa0109900-mRNA-1;_AED=0.07;_eAED=0.07;_QI=134|0.91|1|1|0.91|0.84|13|311|931
chr1_3 exon 21972821 21973396 21972821 ID=Msa0109900-mRNA-1:exon:7894;Parent=Msa0109900-mRNA-1
chr1_3 exon 21973511 21973789 21973511 ID=Msa0109900-mRNA-1:exon:7893;Parent=Msa0109900-mRNA-1
chr1_3 exon 21974079 21974218 21974079 ID=Msa0109900-mRNA-1:exon:7892;Parent=Msa0109900-mRNA-1
chr1_3 exon 21976777 21976970 21976777 ID=Msa0109900-mRNA-1:exon:7891;Parent=Msa0109900-mRNA-1
chr1_3 exon 21977084 21977276 21977084 ID=Msa0109900-mRNA-1:exon:7890;Parent=Msa0109900-mRNA-1
chr1_3 exon 21978439 21979155 21978439 ID=Msa0109900-mRNA-1:exon:7889;Parent=Msa0109900-mRNA-1
chr1_3 exon 21979504 21979632 21979504 ID=Msa0109900-mRNA-1:exon:7888;Parent=Msa0109900-mRNA-1
chr1_3 exon 21979722 21979934 21979722 ID=Msa0109900-mRNA-1:exon:7887;Parent=Msa0109900-mRNA-1
chr1_3 exon 21980026 21980085 21980026 ID=Msa0109900-mRNA-1:exon:7886;Parent=Msa0109900-mRNA-1
chr1_3 exon 21980327 21980409 21980327 ID=Msa0109900-mRNA-1:exon:7885;Parent=Msa0109900-mRNA-1
chr1_3 exon 21980795 21980930 21980795 ID=Msa0109900-mRNA-1:exon:7884;Parent=Msa0109900-mRNA-1
chr1_3 exon 21982366 21982787 21982366 ID=Msa0109900-mRNA-1:exon:7883;Parent=Msa0109900-mRNA-1
chr1_3 exon 21982818 21982916 21982818 ID=Msa0109900-mRNA-1:exon:7882;Parent=Msa0109900-mRNA-1
chr1_3 five_prime_UTR 21982818 21982916 21982818 ID=Msa0109900-mRNA-1:five_prime_utr;Parent=Msa0109900-mRNA-1
chr1_3 five_prime_UTR 21982753 21982787 21982753 ID=Msa0109900-mRNA-1:five_prime_utr;Parent=Msa0109900-mRNA-1
chr1_3 CDS 21982366 21982752 21982366 ID=Msa0109900-mRNA-1:cds;Parent=Msa0109900-mRNA-1
chr1_3 CDS 21980795 21980930 21980795 ID=Msa0109900-mRNA-1:cds;Parent=Msa0109900-mRNA-1
chr1_3 CDS 21980327 21980409 21980327 ID=Msa0109900-mRNA-1:cds;Parent=Msa0109900-mRNA-1
chr1_3 CDS 21980026 21980085 21980026 ID=Msa0109900-mRNA-1:cds;Parent=Msa0109900-mRNA-1
chr1_3 CDS 21979722 21979934 21979722 ID=Msa0109900-mRNA-1:cds;Parent=Msa0109900-mRNA-1
chr1_3 CDS 21979504 21979632 21979504 ID=Msa0109900-mRNA-1:cds;Parent=Msa0109900-mRNA-1
chr1_3 CDS 21978439 21979155 21978439 ID=Msa0109900-mRNA-1:cds;Parent=Msa0109900-mRNA-1
chr1_3 CDS 21977084 21977276 21977084 ID=Msa0109900-mRNA-1:cds;Parent=Msa0109900-mRNA-1
chr1_3 CDS 21976777 21976970 21976777 ID=Msa0109900-mRNA-1:cds;Parent=Msa0109900-mRNA-1
chr1_3 CDS 21974079 21974218 21974079 ID=Msa0109900-mRNA-1:cds;Parent=Msa0109900-mRNA-1
chr1_3 CDS 21973511 21973789 21973511 ID=Msa0109900-mRNA-1:cds;Parent=Msa0109900-mRNA-1
chr1_3 CDS 21973132 21973396 21973132 ID=Msa0109900-mRNA-1:cds;Parent=Msa0109900-mRNA-1
chr1_3 three_prime_UTR 21972821 21973131 21972821 ID=Msa0109900-mRNA-1:three_prime_utr;Parent=Msa0109900-mRNA-1
Gene Sequence

>Msa0109900

ATGGCGAAATCATCCAAACGCAGCATCGCCAATGGAACTAGCAGCAACAACAACAACAACAAGAGCACCAGCAAGAAGAAGAAGAACAACAAAATGGGTCCCGAAGCGGTAGCCATGAAAGCAAAAGCTCAAAAAACGAACACCAACCCATTCGAGTCAATCTGGTCACGTAGGAAATTCGAAGTAATGGGTCAGAAGCGGAAAGGAGATACCAAACGAATGGGGTTGGCTCGTTCTCTTGCTATTGAGAAGAGGAAGAAGACACTTCTTAAGGAGTATGAACAGAGTAACAAATCTTCGGAGTTTATTGATAGGCGAATCGGTGAGAATGATGAAGGGCTTGATGATTTTGGTAAAGCTATTTTGAGATCGCAGCGTGAACGTCAGTGGAATGTGAAATCGAGTAAGAAAAGCAAGTATCACTTGTCAGAAGAAGATGATGATGAGTTTGAAGGAATTGATGGTCTTGGAAGGGATGACTTTGAAGATGAGATGCTTGATGGAGATGATGATGAAACTGATAATAATTCAGATTTGGGTCGGCGTCGTAATGCTCGTAGTATGCAGAGTCCAGGCGAAGCTGGCGTAGCCGACGGTGGGGAAAATAGACATAAAACCAAGAAGGAAGTGATGGACGAAGTTATTGCAAAAAGCAAGTTTTACAAGGCTGAAAAAGCAAAAGAAAAGGAAAAAGATGAAGACCTGCTGGAAGGATTAGATAAGGACTTCACTTCTCTGGCTCATTCTGAGGCCTTGTTGGCTCTGACTGAACCAAACAAGATGAAAGCTTTGAAGGCTCTGGTGAACAGTAGTATTTCAAATGAAAAAAGTGATAAAGATGGCTTGTCTGCTAAACGGACAATGAATAATTCTGTTCAGGAAAAGCCTGATGAATATGACCAACTTGTCAGACAAATGGGATTTGAAATGCGTGCTCGCCCTTCAGATAGGCGGAAGACTCAGGAAGAGATTGATCAGGAGGAAAGAGAACATCTAGAGGAGTTGGAGAAAAAACGGCAGAAGAGGATGACCGCTGCTGAAGATTCGAGTGAAGAAGACGATGAAGAATCAGAAAAGCCATCAAAAGAGAAACCAAGATCTCTCTCTGGTGATGACCTTGGCGATTCCTTCTCCGTCGATGAAGAAACTATGACTAAAAAGGGTTGGGTTGATGAAATTCTCGAGAGAAGAGATGAAGAGGAGGGTTCTTCTAGTGAAGATGATGATGGTGAAGATGATGATGATTTGGAAAGGTCTGAAGATTCTGATGATGGATCAGAGGATGATCTTGATGAAAACGATAAGAATACTACTTTGAAAGATTGGGAACAGAGTGATGATGATGATATCAGTGCAGGTTCAGAAGATGAAGACGATGATATCAGTGCTGGTTCAGAAGACGAAGATGAGGATGAAGAAAGAGCCGCGGAAGAAGTTGATAAGGTAAAAAGATTGAATGTTGGTATTCATAAAAAAGCAAAGAGAATTGATTCTGTTGAAAGTGTAAAGGGAGATAATGGTTCTTTAAATGCCAAGAAGATAGTCATTGGAGGGAAAATGTCGAAAGAGTTGGAGATTCCTTATATAATTGAAGCTCCGAAGACCTTTGAAGAATTATGTTCACTAGTGGATAAACGTTCAAATTCTGACACTATCTTAATCGTCAATCGGATTCGGAAAAGCAATCCAATCACACTTGCTGCAGAAAATCGAAAGAAAGTACAAGTATTTTATGGAGTATTATTGCAGTATTTTGCTGTTTTGGCAAATAAGAAACCATTGAACGTTGAATTGATTAACATGCTAGTGAAACCATTGATAGAGATGAGTACGGAAATCCCATACTTTGCTGCAATATGTGCTCGTCGCAGAATAGAAATCACTAGAAAGCAATTTGTTGAGAGTATAAAAAACGGAGAAAGTAGCAGTTGGCCTTCTTCAAAGACGCTGTGTCTATTGCGATTGTGGTCCATGGTATTTCCATGTTCCGATTTTAGACATCCAGTTATGACTCCTGTGATACTATTGATGTGCGAATATCTGATGCGTTGCCCAATAACATCTGGCCGTGATATTGCCGTTGGTTCTTTCTTATGTTCTATGCTTCTCTCTTTATATCATCTTATGGAACTGAAAGATCTCAAGCCACTATTGCGCATTAATGAGGAAGTAGACAAGATTAGCGCTTTGAATTTCTTTAAGTTAATAGACATGCCCGAAGACTCTCCATTCTTCACTACTGACAGTTTCAGGGCTAGTGTATTAGTTACCGCTGTTGAAACCCTACAAGGATATATCAATGCCTATGATAACTTGAGTTCGTTCCCAGAAATATTTTTACCAATTTTGAGATTACTACTTGAGATAGCTGAACAGAAAAATATGCCAAATGCATTACGGGATAAAATTAAAGATGTGGCTGAGCTGATTAAGTTGAAAGTGGATGAACATCATACTTTGAGGCGACCACTTCAAATGCGGAAACAAAAGCCAGTTCCAATCAAATTACTGAATCCTAAGTTTGAGGAAAACTATGTTAAGGGTAGAGATTATGATCCAGACCGTGAGCGAGCTGAAAGAAAAAAATTGAAGAGAGAGGTGAGGCGCGAAGCTAAAGGGGCTGCTCGTGAAATACGTAAAGACAACTACTTCTTGCTTGATGTGAAGGAAAAAGAAAGGTCTTTAATGGAGAAAGCAAGAGCTGAGAAGTATGGAAGGACTAAAGCCTTCCTTCAAGAGCAAGAACATGCTTTTAAATCTGGACAACTAGGAAAAGGAAAGAAGAGAAGTAGATAA
Protein sequence

>Msa0109900

MAKSSKRSIANGTSSNNNNNKSTSKKKKNNKMGPEAVAMKAKAQKTNTNPFESIWSRRKFEVMGQKRKGDTKRMGLARSLAIEKRKKTLLKEYEQSNKSSEFIDRRIGENDEGLDDFGKAILRSQRERQWNVKSSKKSKYHLSEEDDDEFEGIDGLGRDDFEDEMLDGDDDETDNNSDLGRRRNARSMQSPGEAGVADGGENRHKTKKEVMDEVIAKSKFYKAEKAKEKEKDEDLLEGLDKDFTSLAHSEALLALTEPNKMKALKALVNSSISNEKSDKDGLSAKRTMNNSVQEKPDEYDQLVRQMGFEMRARPSDRRKTQEEIDQEEREHLEELEKKRQKRMTAAEDSSEEDDEESEKPSKEKPRSLSGDDLGDSFSVDEETMTKKGWVDEILERRDEEEGSSSEDDDGEDDDDLERSEDSDDGSEDDLDENDKNTTLKDWEQSDDDDISAGSEDEDDDISAGSEDEDEDEERAAEEVDKVKRLNVGIHKKAKRIDSVESVKGDNGSLNAKKIVIGGKMSKELEIPYIIEAPKTFEELCSLVDKRSNSDTILIVNRIRKSNPITLAAENRKKVQVFYGVLLQYFAVLANKKPLNVELINMLVKPLIEMSTEIPYFAAICARRRIEITRKQFVESIKNGESSSWPSSKTLCLLRLWSMVFPCSDFRHPVMTPVILLMCEYLMRCPITSGRDIAVGSFLCSMLLSLYHLMELKDLKPLLRINEEVDKISALNFFKLIDMPEDSPFFTTDSFRASVLVTAVETLQGYINAYDNLSSFPEIFLPILRLLLEIAEQKNMPNALRDKIKDVAELIKLKVDEHHTLRRPLQMRKQKPVPIKLLNPKFEENYVKGRDYDPDRERAERKKLKREVRREAKGAAREIRKDNYFLLDVKEKERSLMEKARAEKYGRTKAFLQEQEHAFKSGQLGKGKKRSR*