Alfalfa Gene Editing Database
Alfalfa Gene Editing Database
| Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|
| Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|
| Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa0775190 | G7KE40 | 100.000 | 161 | 0 | 0 | 1 | 161 | 1 | 161 | 6.59e-115 | 331 |
| Gene ID | Type | Classification |
|---|
| Gene ID | Type | Classification |
|---|
Co-expression Network
| Gene1 | Gene2 | correlation coefficient | p_value | FDR |
|---|---|---|---|---|
| Msa0006070 | Msa0775190 | 0.818947 | 1.502699e-52 | -8.615850e-47 |
| Msa0006110 | Msa0775190 | 0.814109 | 1.821285e-51 | -8.615850e-47 |
| Msa0011170 | Msa0775190 | 0.816835 | 4.506574e-52 | -8.615850e-47 |
| Msa0015390 | Msa0775190 | 0.809392 | 1.935558e-50 | -8.615850e-47 |
| Msa0017510 | Msa0775190 | 0.810278 | 1.247879e-50 | -8.615850e-47 |
| Msa0020410 | Msa0775190 | 0.816508 | 5.334419e-52 | -8.615850e-47 |
| Msa0026910 | Msa0775190 | 0.810504 | 1.115557e-50 | -8.615850e-47 |
| Msa0036140 | Msa0775190 | 0.803137 | 4.024288e-49 | -8.615850e-47 |
| Msa0054480 | Msa0775190 | 0.807887 | 4.059052e-50 | -8.615850e-47 |
| Msa0075880 | Msa0775190 | 0.808710 | 2.709258e-50 | -8.615850e-47 |
| Msa0095560 | Msa0775190 | 0.804043 | 2.610900e-49 | -8.615850e-47 |
| Msa0109900 | Msa0775190 | 0.820613 | 6.252959e-53 | -8.615850e-47 |
| Msa0112750 | Msa0775190 | 0.803390 | 3.566209e-49 | -8.615850e-47 |
| Msa0117710 | Msa0775190 | 0.803423 | 3.511391e-49 | -8.615850e-47 |
| Msa0610430 | Msa0775190 | 0.851423 | 8.963560e-61 | -8.615850e-47 |
| Msa0616160 | Msa0775190 | 0.801025 | 1.093722e-48 | -8.615850e-47 |
| Msa0626090 | Msa0775190 | 0.810508 | 1.113108e-50 | -8.615850e-47 |
| Msa0633840 | Msa0775190 | 0.802322 | 5.926678e-49 | -8.615850e-47 |
| Msa0657970 | Msa0775190 | 0.817657 | 2.944031e-52 | -8.615850e-47 |
| Msa0661650 | Msa0775190 | 0.811050 | 8.497398e-51 | -8.615850e-47 |
| Msa0663240 | Msa0775190 | 0.806955 | 6.397980e-50 | -8.615850e-47 |
| Msa0663380 | Msa0775190 | 0.801877 | 7.318434e-49 | -8.615850e-47 |
| Msa0663810 | Msa0775190 | 0.831238 | 1.869321e-55 | -8.615850e-47 |
| Msa0672570 | Msa0775190 | 0.800360 | 1.494617e-48 | -8.615850e-47 |
| Msa0673460 | Msa0775190 | 0.818185 | 2.236930e-52 | -8.615850e-47 |
| Msa0692040 | Msa0775190 | -0.831581 | 1.539426e-55 | -8.615850e-47 |
| Msa0692830 | Msa0775190 | 0.818892 | 1.546371e-52 | -8.615850e-47 |
| Msa0692950 | Msa0775190 | 0.841238 | 5.362773e-58 | -8.615850e-47 |
| Msa0693380 | Msa0775190 | 0.808815 | 2.573288e-50 | -8.615850e-47 |
| Msa0703050 | Msa0775190 | 0.814474 | 1.512729e-51 | -8.615850e-47 |
| Msa0715700 | Msa0775190 | 0.808647 | 2.794791e-50 | -8.615850e-47 |
| Msa0716840 | Msa0775190 | 0.813586 | 2.374382e-51 | -8.615850e-47 |
| Msa0728440 | Msa0775190 | 0.826102 | 3.260862e-54 | -8.615850e-47 |
| Msa0731940 | Msa0775190 | 0.812917 | 3.330578e-51 | -8.615850e-47 |
| Msa0735170 | Msa0775190 | 0.831516 | 1.597133e-55 | -8.615850e-47 |
| Msa0742380 | Msa0775190 | 0.802737 | 4.867020e-49 | -8.615850e-47 |
| Msa0745790 | Msa0775190 | 0.810046 | 1.400680e-50 | -8.615850e-47 |
| Msa0766630 | Msa0775190 | 0.806210 | 9.189423e-50 | -8.615850e-47 |
| Msa0775190 | Msa0777790 | 0.802334 | 5.892522e-49 | -8.615850e-47 |
| Msa0775190 | Msa0790660 | -0.824689 | 7.043987e-54 | -8.615850e-47 |
| Msa0775190 | Msa0794510 | -0.800223 | 1.593677e-48 | -8.615850e-47 |
| Msa0775190 | Msa0802830 | 0.803454 | 3.459129e-49 | -8.615850e-47 |
| Msa0775190 | Msa0805550 | 0.828556 | 8.417519e-55 | -8.615850e-47 |
| Msa0775190 | Msa0810220 | 0.815571 | 8.634309e-52 | -8.615850e-47 |
| Msa0775190 | Msa0820770 | 0.814914 | 1.208845e-51 | -8.615850e-47 |
| Msa0775190 | Msa0820850 | 0.807479 | 4.954804e-50 | -8.615850e-47 |
| Msa0775190 | Msa0824680 | 0.807249 | 5.544281e-50 | -8.615850e-47 |
| Msa0775190 | Msa0828850 | 0.818292 | 2.115415e-52 | -8.615850e-47 |
| Msa0775190 | Msa0832340 | 0.823727 | 1.185103e-53 | -8.615850e-47 |
| Msa0775190 | Msa0849030 | 0.814516 | 1.480876e-51 | -8.615850e-47 |
| Msa0775190 | Msa0861090 | 0.805739 | 1.154413e-49 | -8.615850e-47 |
| Msa0775190 | Msa0861130 | 0.808149 | 3.568472e-50 | -8.615850e-47 |
| Msa0775190 | Msa0876580 | 0.823579 | 1.283940e-53 | -8.615850e-47 |
| Msa0775190 | Msa0880140 | 0.803870 | 2.835472e-49 | -8.615850e-47 |
| Msa0775190 | Msa0922410 | 0.806759 | 7.038566e-50 | -8.615850e-47 |
| Msa0775190 | Msa0925250 | 0.815260 | 1.012436e-51 | -8.615850e-47 |
| Msa0775190 | Msa0925290 | 0.830104 | 3.543155e-55 | -8.615850e-47 |
| Msa0775190 | Msa0927380 | 0.809485 | 1.849012e-50 | -8.615850e-47 |
| Msa0775190 | Msa0933100 | 0.840250 | 9.734231e-58 | -8.615850e-47 |
| Msa0775190 | Msa0947660 | 0.828128 | 1.067671e-54 | -8.615850e-47 |
| Msa0775190 | Msa0966400 | 0.806663 | 7.372661e-50 | -8.615850e-47 |
| Msa0775190 | Msa0969520 | 0.834198 | 3.443263e-56 | -8.615850e-47 |
| Msa0775190 | Msa0974070 | 0.809379 | 1.947984e-50 | -8.615850e-47 |
| Msa0775190 | Msa0998690 | 0.803358 | 3.622012e-49 | -8.615850e-47 |
| Msa0775190 | Msa0999100 | 0.802597 | 5.201113e-49 | -8.615850e-47 |
| Msa0775190 | Msa1014540 | 0.829547 | 4.842511e-55 | -8.615850e-47 |
| Msa0775190 | Msa1061680 | 0.801859 | 7.381389e-49 | -8.615850e-47 |
| Msa0775190 | Msa1081590 | 0.805398 | 1.360712e-49 | -8.615850e-47 |
| Msa0775190 | Msa1082500 | 0.819539 | 1.101558e-52 | -8.615850e-47 |
| Msa0775190 | Msa1085200 | 0.819035 | 1.434325e-52 | -8.615850e-47 |
| Msa0775190 | Msa1088950 | 0.828171 | 1.042529e-54 | -8.615850e-47 |
| Msa0775190 | Msa1108160 | 0.811262 | 7.644889e-51 | -8.615850e-47 |
| Msa0775190 | Msa1109680 | 0.825822 | 3.800848e-54 | -8.615850e-47 |
| Msa0775190 | Msa1137570 | 0.804117 | 2.519695e-49 | -8.615850e-47 |
| Msa0775190 | Msa1147900 | 0.826207 | 3.079672e-54 | -8.615850e-47 |
| Msa0775190 | Msa1174040 | 0.807447 | 5.032050e-50 | -8.615850e-47 |
| Msa0775190 | Msa1193290 | 0.813297 | 2.749401e-51 | -8.615850e-47 |
| Msa0775190 | Msa1199830 | -0.800283 | 1.549517e-48 | -8.615850e-47 |
| Msa0775190 | Msa1228590 | 0.818300 | 2.106526e-52 | -8.615850e-47 |
| Msa0775190 | Msa1244250 | 0.803569 | 3.274785e-49 | -8.615850e-47 |
| Msa0775190 | Msa1253020 | 0.806566 | 7.729126e-50 | -8.615850e-47 |
| Msa0775190 | Msa1261250 | 0.807674 | 4.503696e-50 | -8.615850e-47 |
| Msa0775190 | Msa1263790 | 0.802711 | 4.928607e-49 | -8.615850e-47 |
| Msa0775190 | Msa1276440 | 0.803212 | 3.882369e-49 | -8.615850e-47 |
| Msa0775190 | Msa1284680 | 0.833239 | 5.977640e-56 | -8.615850e-47 |
| Msa0775190 | Msa1306840 | 0.809098 | 2.237681e-50 | -8.615850e-47 |
| Msa0775190 | Msa1306850 | 0.809409 | 1.919258e-50 | -8.615850e-47 |
| Msa0775190 | Msa1313140 | 0.813178 | 2.919312e-51 | -8.615850e-47 |
| Msa0775190 | Msa1317970 | 0.800228 | 1.590152e-48 | -8.615850e-47 |
| Msa0775190 | Msa1327680 | 0.805823 | 1.108440e-49 | -8.615850e-47 |
| Msa0775190 | Msa1343760 | 0.820634 | 6.185092e-53 | -8.615850e-47 |
| Msa0775190 | Msa1353470 | 0.802971 | 4.354077e-49 | -8.615850e-47 |
| Msa0775190 | Msa1359040 | 0.823263 | 1.521545e-53 | -8.615850e-47 |
| Msa0775190 | Msa1362390 | 0.800009 | 1.762004e-48 | -8.615850e-47 |
| Msa0775190 | Msa1362670 | 0.807242 | 5.562743e-50 | -8.615850e-47 |
| Msa0775190 | Msa1372760 | 0.828795 | 7.370515e-55 | -8.615850e-47 |
| Msa0775190 | Msa1373030 | 0.829948 | 3.867810e-55 | -8.615850e-47 |
| Msa0775190 | Msa1389400 | 0.804663 | 1.939277e-49 | -8.615850e-47 |
| Msa0775190 | Msa1392260 | 0.802062 | 6.703221e-49 | -8.615850e-47 |
| Msa0775190 | Msa1407060 | 0.828224 | 1.012653e-54 | -8.615850e-47 |
| Msa0775190 | Msa1409870 | 0.800978 | 1.118275e-48 | -8.615850e-47 |
| Msa0775190 | Msa1411020 | 0.801655 | 8.128939e-49 | -8.615850e-47 |
| Msa0775190 | Msa1415910 | 0.803619 | 3.197224e-49 | -8.615850e-47 |
| Msa0775190 | Msa1420140 | 0.801882 | 7.302003e-49 | -8.615850e-47 |
| Msa0775190 | Msa1420290 | 0.802216 | 6.231597e-49 | -8.615850e-47 |
| Msa0775190 | Msa1423870 | 0.810150 | 1.329608e-50 | -8.615850e-47 |
| Msa0775190 | Msa1424290 | 0.800605 | 1.332715e-48 | -8.615850e-47 |
| Msa0775190 | Msa1427230 | 0.801544 | 8.565419e-49 | -8.615850e-47 |
| Msa0775190 | Msa1432420 | 0.805251 | 1.461218e-49 | -8.615850e-47 |
| Msa0775190 | Msa1434350 | 0.801204 | 1.005479e-48 | -8.615850e-47 |
| Msa0775190 | Msa1439320 | 0.801904 | 7.225161e-49 | -8.615850e-47 |
| Msa0775190 | Msa1452240 | 0.812889 | 3.377869e-51 | -8.615850e-47 |
| Msa0775190 | Msa1460830 | 0.808278 | 3.350856e-50 | -8.615850e-47 |
| Msa0775190 | Msa1466540 | 0.842059 | 3.258312e-58 | -8.615850e-47 |
| Msa0131770 | Msa0775190 | 0.819599 | 1.067257e-52 | -8.615850e-47 |
| Msa0145190 | Msa0775190 | 0.804050 | 2.601524e-49 | -8.615850e-47 |
| Msa0157290 | Msa0775190 | 0.810518 | 1.107602e-50 | -8.615850e-47 |
| Msa0166870 | Msa0775190 | 0.802720 | 4.908077e-49 | -8.615850e-47 |
| Msa0178930 | Msa0775190 | 0.806975 | 6.334754e-50 | -8.615850e-47 |
| Msa0201070 | Msa0775190 | 0.805258 | 1.456068e-49 | -8.615850e-47 |
| Msa0220740 | Msa0775190 | 0.804929 | 1.706191e-49 | -8.615850e-47 |
| Msa0222890 | Msa0775190 | 0.811057 | 8.469128e-51 | -8.615850e-47 |
| Msa0223910 | Msa0775190 | 0.825517 | 4.488863e-54 | -8.615850e-47 |
| Msa0229990 | Msa0775190 | 0.803560 | 3.288142e-49 | -8.615850e-47 |
| Msa0233300 | Msa0775190 | 0.810250 | 1.265518e-50 | -8.615850e-47 |
| Msa0369460 | Msa0775190 | 0.811995 | 5.295227e-51 | -8.615850e-47 |
| Msa0388950 | Msa0775190 | 0.816995 | 4.147358e-52 | -8.615850e-47 |
| Msa0397750 | Msa0775190 | 0.816462 | 5.460602e-52 | -8.615850e-47 |
| Msa0402290 | Msa0775190 | 0.806327 | 8.682714e-50 | -8.615850e-47 |
| Msa0410650 | Msa0775190 | 0.809014 | 2.332654e-50 | -8.615850e-47 |
| Msa0431690 | Msa0775190 | 0.810401 | 1.173901e-50 | -8.615850e-47 |
| Msa0455760 | Msa0775190 | 0.814894 | 1.221207e-51 | -8.615850e-47 |
| Msa0245940 | Msa0775190 | 0.802637 | 5.104753e-49 | -8.615850e-47 |
| Msa0253200 | Msa0775190 | 0.809891 | 1.511843e-50 | -8.615850e-47 |
| Msa0257460 | Msa0775190 | 0.801036 | 1.088015e-48 | -8.615850e-47 |
| Msa0262510 | Msa0775190 | 0.814907 | 1.212948e-51 | -8.615850e-47 |
| Msa0264150 | Msa0775190 | 0.809480 | 1.853351e-50 | -8.615850e-47 |
| Msa0280090 | Msa0775190 | 0.808666 | 2.768328e-50 | -8.615850e-47 |
| Msa0283450 | Msa0775190 | 0.803931 | 2.754713e-49 | -8.615850e-47 |
| Msa0284520 | Msa0775190 | 0.805620 | 1.222401e-49 | -8.615850e-47 |
| Msa0287410 | Msa0775190 | 0.802164 | 6.388418e-49 | -8.615850e-47 |
| Msa0292030 | Msa0775190 | 0.814370 | 1.595117e-51 | -8.615850e-47 |
| Msa0306210 | Msa0775190 | -0.803196 | 3.913284e-49 | -8.615850e-47 |
| Msa0319170 | Msa0775190 | 0.803847 | 2.867206e-49 | -8.615850e-47 |
| Msa0326110 | Msa0775190 | 0.806342 | 8.619095e-50 | -8.615850e-47 |
| Msa0339620 | Msa0775190 | 0.807827 | 4.179926e-50 | -8.615850e-47 |
| Msa0340470 | Msa0775190 | 0.836213 | 1.067549e-56 | -8.615850e-47 |
| Msa0344910 | Msa0775190 | 0.802617 | 5.153939e-49 | -8.615850e-47 |
| Msa0344980 | Msa0775190 | 0.807494 | 4.918305e-50 | -8.615850e-47 |
| Msa0484780 | Msa0775190 | 0.825324 | 4.987601e-54 | -8.615850e-47 |
| Msa0507680 | Msa0775190 | 0.811801 | 5.837371e-51 | -8.615850e-47 |
| Msa0510420 | Msa0775190 | 0.806615 | 7.549235e-50 | -8.615850e-47 |
| Msa0512900 | Msa0775190 | 0.800792 | 1.220343e-48 | -8.615850e-47 |
| Msa0529040 | Msa0775190 | 0.805719 | 1.165431e-49 | -8.615850e-47 |
| Msa0532350 | Msa0775190 | 0.814373 | 1.592834e-51 | -8.615850e-47 |
| Msa0538600 | Msa0775190 | 0.817378 | 3.401789e-52 | -8.615850e-47 |
| Msa0542520 | Msa0775190 | 0.839915 | 1.190950e-57 | -8.615850e-47 |
| Msa0547890 | Msa0775190 | 0.801613 | 8.288251e-49 | -8.615850e-47 |
| Msa0551890 | Msa0775190 | 0.800645 | 1.307530e-48 | -8.615850e-47 |
| Msa0563840 | Msa0775190 | 0.808401 | 3.153260e-50 | -8.615850e-47 |
| Msa0576880 | Msa0775190 | 0.802431 | 5.628630e-49 | -8.615850e-47 |
| Msa0577500 | Msa0775190 | 0.809210 | 2.117727e-50 | -8.615850e-47 |
| Msa0593650 | Msa0775190 | 0.807660 | 4.535674e-50 | -8.615850e-47 |
| Msa0602390 | Msa0775190 | 0.808530 | 2.959553e-50 | -8.615850e-47 |
PPI
| Gene1 | Gene2 | Type |
|---|
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa0775190 | MtrunA17_Chr5g0429501 | 100.000 | 161 | 0 | 0 | 1 | 161 | 1 | 161 | 1.27e-118 | 331 |
| Msa0775190 | MtrunA17_Chr3g0104001 | 46.012 | 163 | 70 | 5 | 4 | 160 | 4 | 154 | 2.30e-41 | 135 |
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa0775190 | AT5G58920.1 | 63.636 | 165 | 52 | 2 | 1 | 160 | 1 | 162 | 2.33e-74 | 220 |
Find 64 sgRNAs with CRISPR-Local
Find 187 sgRNAs with CRISPR-GE
CRISPR-Local
| sgRNA_sequence | on_target_score | Position | Region |
|---|---|---|---|
| GGCCGAATAACTACTATTTC+TGG | 0.172017 | 5_2:-51992784 | Msa0775190:CDS |
| TATGGAGGAGTTTATTAAAA+AGG | 0.222603 | 5_2:-51992588 | Msa0775190:CDS |
| TTTAACAAATGTACCTGTTT+TGG | 0.235557 | 5_2:+51992959 | None:intergenic |
| TTTGTGCTTTCTTGTGTATC+AGG | 0.248485 | 5_2:-51992177 | None:intergenic |
| TGAAGTTATTGGTGAGCTTC+AGG | 0.305838 | 5_2:-51992432 | Msa0775190:CDS |
| TCATTCTCCACCATCCCTTT+AGG | 0.312626 | 5_2:+51992539 | None:intergenic |
| TTCCAGAAATAGTAGTTATT+CGG | 0.317433 | 5_2:+51992782 | None:intergenic |
| GAGATTCCGATGAATGAATA+TGG | 0.334327 | 5_2:+51993036 | None:intergenic |
| ACTAATATATTTGTTGTTCT+CGG | 0.348802 | 5_2:-51992277 | Msa0775190:three_prime_UTR |
| AGGGATGGTGGAGAATGATA+TGG | 0.349759 | 5_2:-51992534 | Msa0775190:CDS |
| TACTATTTCTGGAAACAAAT+GGG | 0.354987 | 5_2:-51992773 | Msa0775190:CDS |
| TGATTATAAGAAGGAGCTTA+AGG | 0.365177 | 5_2:-51992504 | Msa0775190:CDS |
| TCCAGCTCTTTCTCTTCCTT+CGG | 0.366407 | 5_2:+51992659 | None:intergenic |
| AGCAAGAGGCTCAGAAGCTT+TGG | 0.366979 | 5_2:-51992469 | Msa0775190:CDS |
| TTTCTAAAGAAAATAGGGTT+GGG | 0.376886 | 5_2:-51992806 | Msa0775190:CDS |
| AGGCTCAGAAGCTTTGGTTT+AGG | 0.390308 | 5_2:-51992463 | Msa0775190:CDS |
| CTACTATTTCTGGAAACAAA+TGG | 0.394820 | 5_2:-51992774 | Msa0775190:CDS |
| GGGATGATTGGAACAACTAT+TGG | 0.398836 | 5_2:-51992563 | Msa0775190:CDS |
| TCTTTCTCTTCCTTCGGCAT+TGG | 0.403880 | 5_2:+51992665 | None:intergenic |
| TGTTAAGCACACCTGGGATT+GGG | 0.412458 | 5_2:+51993206 | None:intergenic |
| GCGGCGTGAGTTTCCTTATC+CGG | 0.412963 | 5_2:-51992624 | Msa0775190:CDS |
| GCTTCCTCGTCTCCCGGATA+AGG | 0.414927 | 5_2:+51992611 | None:intergenic |
| AGGATGAGGAATGAAGTTAT+TGG | 0.417045 | 5_2:-51992443 | Msa0775190:CDS |
| GAAACAAATGGGGAAGGCTT+TGG | 0.427981 | 5_2:-51992762 | Msa0775190:CDS |
| TTGAATCGAATCCTTAAAGT+TGG | 0.431687 | 5_2:-51992378 | Msa0775190:three_prime_UTR |
| TGAATCGAATCCTTAAAGTT+GGG | 0.445885 | 5_2:-51992377 | Msa0775190:three_prime_UTR |
| TTCAACGAGACGTCGCCGTT+GGG | 0.459182 | 5_2:-51992704 | Msa0775190:CDS |
| GAAACACCGCAACCCAAAAC+AGG | 0.459747 | 5_2:-51992972 | Msa0775190:intron |
| AGAAGCTTTGGTTTAGGATG+AGG | 0.464134 | 5_2:-51992457 | Msa0775190:CDS |
| GGAACAACTATTGGACCTAA+AGG | 0.464559 | 5_2:-51992554 | Msa0775190:CDS |
| TTGTTAAGCACACCTGGGAT+TGG | 0.465193 | 5_2:+51993205 | None:intergenic |
| TTTCACTCATTCCCAATCCC+AGG | 0.473777 | 5_2:-51993217 | Msa0775190:intron |
| TCCATAGCTTCCTCGTCTCC+CGG | 0.480393 | 5_2:+51992605 | None:intergenic |
| GAACAACTATTGGACCTAAA+GGG | 0.484376 | 5_2:-51992553 | Msa0775190:CDS |
| TTCTAAAGAAAATAGGGTTG+GGG | 0.488054 | 5_2:-51992805 | Msa0775190:CDS |
| GGATAAGAAGTTTGAGCAAG+AGG | 0.490071 | 5_2:-51992483 | Msa0775190:CDS |
| AGACGTCGCCGTTGGGTTGG+TGG | 0.493198 | 5_2:-51992697 | Msa0775190:CDS |
| TTAAAATACTACATTTGTGT+TGG | 0.495464 | 5_2:-51992352 | Msa0775190:three_prime_UTR |
| ATCGTTCCATATTCATTCAT+CGG | 0.498255 | 5_2:-51993042 | Msa0775190:five_prime_UTR |
| TATTGGTGAGCTTCAGGAGA+AGG | 0.502673 | 5_2:-51992426 | Msa0775190:CDS |
| TCCGGGAGACGAGGAAGCTA+TGG | 0.502931 | 5_2:-51992606 | Msa0775190:CDS |
| TTTGTTGTTCTCGGATAATG+AGG | 0.506445 | 5_2:-51992268 | Msa0775190:three_prime_UTR |
| GGCGTGCACTTATGCAGTGA+TGG | 0.519711 | 5_2:-51992741 | Msa0775190:CDS |
| ATTCAACGAGACGTCGCCGT+TGG | 0.520224 | 5_2:-51992705 | Msa0775190:CDS |
| CGGCGTGAGTTTCCTTATCC+GGG | 0.526582 | 5_2:-51992623 | Msa0775190:CDS |
| GAATCGAATCCTTAAAGTTG+GGG | 0.531721 | 5_2:-51992376 | Msa0775190:three_prime_UTR |
| GGATGAGAGTGATTATAAGA+AGG | 0.532632 | 5_2:-51992513 | Msa0775190:CDS |
| ACGAGACGTCGCCGTTGGGT+TGG | 0.548467 | 5_2:-51992700 | Msa0775190:CDS |
| ATTGGTGAGCTTCAGGAGAA+GGG | 0.553628 | 5_2:-51992425 | Msa0775190:CDS |
| GCCGAAGGAAGAGAAAGAGC+TGG | 0.556282 | 5_2:-51992660 | Msa0775190:CDS |
| GCGTGCACTTATGCAGTGAT+GGG | 0.574227 | 5_2:-51992740 | Msa0775190:CDS |
| AGCTGGAGCATTTGTATCAG+CGG | 0.590163 | 5_2:-51992643 | Msa0775190:CDS |
| GACATTGAAGCCAATGCCGA+AGG | 0.592265 | 5_2:-51992675 | Msa0775190:CDS |
| TTTCTGGAAACAAATGGGGA+AGG | 0.595864 | 5_2:-51992768 | Msa0775190:CDS |
| TTCAATGTCCACCAACCCAA+CGG | 0.601876 | 5_2:+51992689 | None:intergenic |
| GTTTCGAAGAAGCGTTTACG+AGG | 0.608927 | 5_2:+51992990 | None:intergenic |
| GAATGAATATGGAACGATGA+TGG | 0.611183 | 5_2:+51993047 | None:intergenic |
| GGGAGACGAGGAAGCTATGG+AGG | 0.612133 | 5_2:-51992603 | Msa0775190:CDS |
| AACTATTGGACCTAAAGGGA+TGG | 0.616902 | 5_2:-51992549 | Msa0775190:CDS |
| TATTGGACCTAAAGGGATGG+TGG | 0.625420 | 5_2:-51992546 | Msa0775190:CDS |
| ACTATTTCTGGAAACAAATG+GGG | 0.643504 | 5_2:-51992772 | Msa0775190:CDS |
| GTTTCCTTATCCGGGAGACG+AGG | 0.645303 | 5_2:-51992615 | Msa0775190:CDS |
| CAAAGAAGCCAAATCCGATG+AGG | 0.685781 | 5_2:+51992196 | None:intergenic |
| ATGCAGTGATGGGTGCAGCG+TGG | 0.769428 | 5_2:-51992730 | Msa0775190:CDS |
CRISPR-GE
| badsite warning | sgRNA_sequence | Strand | Position | Region | GC_content |
|---|---|---|---|---|---|
| !! | CATAAAATGTAAAAAATTAT+TGG | + | chr5_2:51992584-51992603 | None:intergenic | 10.0% |
| !!! | TATTTTCTTTAGAAAATATT+GGG | + | chr5_2:51992643-51992662 | None:intergenic | 10.0% |
| !!! | AATATTTTCTAAAGAAAATA+GGG | - | chr5_2:51992643-51992662 | Msa0775190:CDS | 10.0% |
| !! | CATAAAATGTAAAAAATTAT+TGG | + | chr5_2:51992584-51992603 | None:intergenic | 10.0% |
| !!! | TATTTTCTTTAGAAAATATT+GGG | + | chr5_2:51992643-51992662 | None:intergenic | 10.0% |
| !!! | AATATTTTCTAAAGAAAATA+GGG | - | chr5_2:51992643-51992662 | Msa0775190:CDS | 10.0% |
| !!! | CTATTTTCTTTAGAAAATAT+TGG | + | chr5_2:51992644-51992663 | None:intergenic | 15.0% |
| !!! | CAATATTTTCTAAAGAAAAT+AGG | - | chr5_2:51992642-51992661 | Msa0775190:CDS | 15.0% |
| !!! | CTATTTTCTTTAGAAAATAT+TGG | + | chr5_2:51992644-51992663 | None:intergenic | 15.0% |
| !!! | CAATATTTTCTAAAGAAAAT+AGG | - | chr5_2:51992642-51992661 | Msa0775190:CDS | 15.0% |
| !!! | TAAGATTCAATTTGAAGTTA+GGG | + | chr5_2:51992369-51992388 | None:intergenic | 20.0% |
| !!! | ATAAGATTCAATTTGAAGTT+AGG | + | chr5_2:51992370-51992389 | None:intergenic | 20.0% |
| !! | TTAAAATACTACATTTGTGT+TGG | - | chr5_2:51993102-51993121 | Msa0775190:intron | 20.0% |
| !!! | TTTTAATAAATCACAGTAGA+CGG | - | chr5_2:51993149-51993168 | Msa0775190:intron | 20.0% |
| !!! | ACTAATATATTTGTTGTTCT+CGG | - | chr5_2:51993177-51993196 | Msa0775190:intron | 20.0% |
| !!! | TAAGATTCAATTTGAAGTTA+GGG | + | chr5_2:51992369-51992388 | None:intergenic | 20.0% |
| !!! | ATAAGATTCAATTTGAAGTT+AGG | + | chr5_2:51992370-51992389 | None:intergenic | 20.0% |
| !! | TTAAAATACTACATTTGTGT+TGG | - | chr5_2:51993102-51993121 | Msa0775190:intron | 20.0% |
| !!! | TTTTAATAAATCACAGTAGA+CGG | - | chr5_2:51993149-51993168 | Msa0775190:intron | 20.0% |
| !!! | ACTAATATATTTGTTGTTCT+CGG | - | chr5_2:51993177-51993196 | Msa0775190:intron | 20.0% |
| !! | TTAACAAATGTACCTGTTTT+GGG | + | chr5_2:51992497-51992516 | None:intergenic | 25.0% |
| !! | TTTAACAAATGTACCTGTTT+TGG | + | chr5_2:51992498-51992517 | None:intergenic | 25.0% |
| ! | ACAATATAACATTGCACAAA+AGG | - | chr5_2:51992538-51992557 | Msa0775190:CDS | 25.0% |
| !!! | TTTTCTAAAGAAAATAGGGT+TGG | - | chr5_2:51992647-51992666 | Msa0775190:CDS | 25.0% |
| !! | TTTCTAAAGAAAATAGGGTT+GGG | - | chr5_2:51992648-51992667 | Msa0775190:CDS | 25.0% |
| ! | TTCCAGAAATAGTAGTTATT+CGG | + | chr5_2:51992675-51992694 | None:intergenic | 25.0% |
| !!! | TACTATTTCTGGAAACAAAT+GGG | - | chr5_2:51992681-51992700 | Msa0775190:CDS | 25.0% |
| ! | TATGGAGGAGTTTATTAAAA+AGG | - | chr5_2:51992866-51992885 | Msa0775190:intron | 25.0% |
| ! | ATGGAGGAGTTTATTAAAAA+GGG | - | chr5_2:51992867-51992886 | Msa0775190:intron | 25.0% |
| !!! | TATTTTAATCCCCAACTTTA+AGG | + | chr5_2:51993090-51993109 | None:intergenic | 25.0% |
| !! | TTAACAAATGTACCTGTTTT+GGG | + | chr5_2:51992497-51992516 | None:intergenic | 25.0% |
| !! | TTTAACAAATGTACCTGTTT+TGG | + | chr5_2:51992498-51992517 | None:intergenic | 25.0% |
| ! | ACAATATAACATTGCACAAA+AGG | - | chr5_2:51992538-51992557 | Msa0775190:CDS | 25.0% |
| !!! | TTTTCTAAAGAAAATAGGGT+TGG | - | chr5_2:51992647-51992666 | Msa0775190:CDS | 25.0% |
| !! | TTTCTAAAGAAAATAGGGTT+GGG | - | chr5_2:51992648-51992667 | Msa0775190:CDS | 25.0% |
| ! | TTCCAGAAATAGTAGTTATT+CGG | + | chr5_2:51992675-51992694 | None:intergenic | 25.0% |
| !!! | TACTATTTCTGGAAACAAAT+GGG | - | chr5_2:51992681-51992700 | Msa0775190:CDS | 25.0% |
| ! | TATGGAGGAGTTTATTAAAA+AGG | - | chr5_2:51992866-51992885 | Msa0775190:intron | 25.0% |
| ! | ATGGAGGAGTTTATTAAAAA+GGG | - | chr5_2:51992867-51992886 | Msa0775190:intron | 25.0% |
| !!! | TATTTTAATCCCCAACTTTA+AGG | + | chr5_2:51993090-51993109 | None:intergenic | 25.0% |
| TTGGGAATGAGTGAAAAAAA+AGG | + | chr5_2:51992233-51992252 | None:intergenic | 30.0% | |
| ATCGTTCCATATTCATTCAT+CGG | - | chr5_2:51992412-51992431 | Msa0775190:CDS | 30.0% | |
| TGTGTAATAGTGAGTGTTAT+TGG | + | chr5_2:51992521-51992540 | None:intergenic | 30.0% | |
| ! | AATTTTATGCATCTTAACGC+AGG | - | chr5_2:51992606-51992625 | Msa0775190:CDS | 30.0% |
| ! | TTCTAAAGAAAATAGGGTTG+GGG | - | chr5_2:51992649-51992668 | Msa0775190:CDS | 30.0% |
| !! | CTACTATTTCTGGAAACAAA+TGG | - | chr5_2:51992680-51992699 | Msa0775190:CDS | 30.0% |
| !! | ACTATTTCTGGAAACAAATG+GGG | - | chr5_2:51992682-51992701 | Msa0775190:CDS | 30.0% |
| TGGAGGAGTTTATTAAAAAG+GGG | - | chr5_2:51992868-51992887 | Msa0775190:intron | 30.0% | |
| TGATTATAAGAAGGAGCTTA+AGG | - | chr5_2:51992950-51992969 | Msa0775190:intron | 30.0% | |
| TTGAATCGAATCCTTAAAGT+TGG | - | chr5_2:51993076-51993095 | Msa0775190:intron | 30.0% | |
| TGAATCGAATCCTTAAAGTT+GGG | - | chr5_2:51993077-51993096 | Msa0775190:intron | 30.0% | |
| !!! | TGTCACATTTTTTTCCTCAT+CGG | - | chr5_2:51993244-51993263 | Msa0775190:five_prime_UTR | 30.0% |
| !!! | ATTTTTTTCCTCATCGGATT+TGG | - | chr5_2:51993250-51993269 | Msa0775190:five_prime_UTR | 30.0% |
| TTGGGAATGAGTGAAAAAAA+AGG | + | chr5_2:51992233-51992252 | None:intergenic | 30.0% | |
| ATCGTTCCATATTCATTCAT+CGG | - | chr5_2:51992412-51992431 | Msa0775190:CDS | 30.0% | |
| TGTGTAATAGTGAGTGTTAT+TGG | + | chr5_2:51992521-51992540 | None:intergenic | 30.0% | |
| ! | AATTTTATGCATCTTAACGC+AGG | - | chr5_2:51992606-51992625 | Msa0775190:CDS | 30.0% |
| ! | TTCTAAAGAAAATAGGGTTG+GGG | - | chr5_2:51992649-51992668 | Msa0775190:CDS | 30.0% |
| !! | CTACTATTTCTGGAAACAAA+TGG | - | chr5_2:51992680-51992699 | Msa0775190:CDS | 30.0% |
| !! | ACTATTTCTGGAAACAAATG+GGG | - | chr5_2:51992682-51992701 | Msa0775190:CDS | 30.0% |
| TGGAGGAGTTTATTAAAAAG+GGG | - | chr5_2:51992868-51992887 | Msa0775190:intron | 30.0% | |
| TGATTATAAGAAGGAGCTTA+AGG | - | chr5_2:51992950-51992969 | Msa0775190:intron | 30.0% | |
| TTGAATCGAATCCTTAAAGT+TGG | - | chr5_2:51993076-51993095 | Msa0775190:intron | 30.0% | |
| TGAATCGAATCCTTAAAGTT+GGG | - | chr5_2:51993077-51993096 | Msa0775190:intron | 30.0% | |
| !!! | TGTCACATTTTTTTCCTCAT+CGG | - | chr5_2:51993244-51993263 | Msa0775190:five_prime_UTR | 30.0% |
| !!! | ATTTTTTTCCTCATCGGATT+TGG | - | chr5_2:51993250-51993269 | Msa0775190:five_prime_UTR | 30.0% |
| AAAAAGGCGAGAAAGAACTT+TGG | + | chr5_2:51992217-51992236 | None:intergenic | 35.0% | |
| GAATGAATATGGAACGATGA+TGG | + | chr5_2:51992410-51992429 | None:intergenic | 35.0% | |
| GAGATTCCGATGAATGAATA+TGG | + | chr5_2:51992421-51992440 | None:intergenic | 35.0% | |
| GGAGGAGTTTATTAAAAAGG+GGG | - | chr5_2:51992869-51992888 | Msa0775190:intron | 35.0% | |
| GAGGAGTTTATTAAAAAGGG+GGG | - | chr5_2:51992870-51992889 | Msa0775190:intron | 35.0% | |
| AGGAGTTTATTAAAAAGGGG+GGG | - | chr5_2:51992871-51992890 | Msa0775190:intron | 35.0% | |
| GAACAACTATTGGACCTAAA+GGG | - | chr5_2:51992901-51992920 | Msa0775190:intron | 35.0% | |
| GGATGAGAGTGATTATAAGA+AGG | - | chr5_2:51992941-51992960 | Msa0775190:intron | 35.0% | |
| AGGATGAGGAATGAAGTTAT+TGG | - | chr5_2:51993011-51993030 | Msa0775190:exon | 35.0% | |
| GAATCGAATCCTTAAAGTTG+GGG | - | chr5_2:51993078-51993097 | Msa0775190:intron | 35.0% | |
| !! | TTTGTTGTTCTCGGATAATG+AGG | - | chr5_2:51993186-51993205 | Msa0775190:intron | 35.0% |
| AAAAAGGCGAGAAAGAACTT+TGG | + | chr5_2:51992217-51992236 | None:intergenic | 35.0% | |
| GAATGAATATGGAACGATGA+TGG | + | chr5_2:51992410-51992429 | None:intergenic | 35.0% | |
| GAGATTCCGATGAATGAATA+TGG | + | chr5_2:51992421-51992440 | None:intergenic | 35.0% | |
| GGAGGAGTTTATTAAAAAGG+GGG | - | chr5_2:51992869-51992888 | Msa0775190:intron | 35.0% | |
| GAGGAGTTTATTAAAAAGGG+GGG | - | chr5_2:51992870-51992889 | Msa0775190:intron | 35.0% | |
| AGGAGTTTATTAAAAAGGGG+GGG | - | chr5_2:51992871-51992890 | Msa0775190:intron | 35.0% | |
| GAACAACTATTGGACCTAAA+GGG | - | chr5_2:51992901-51992920 | Msa0775190:intron | 35.0% | |
| GGATGAGAGTGATTATAAGA+AGG | - | chr5_2:51992941-51992960 | Msa0775190:intron | 35.0% | |
| AGGATGAGGAATGAAGTTAT+TGG | - | chr5_2:51993011-51993030 | Msa0775190:exon | 35.0% | |
| GAATCGAATCCTTAAAGTTG+GGG | - | chr5_2:51993078-51993097 | Msa0775190:intron | 35.0% | |
| !! | TTTGTTGTTCTCGGATAATG+AGG | - | chr5_2:51993186-51993205 | Msa0775190:intron | 35.0% |
| ! | TGTGTTTGTTAAGCACACCT+GGG | + | chr5_2:51992257-51992276 | None:intergenic | 40.0% |
| ! | ATGTGTTTGTTAAGCACACC+TGG | + | chr5_2:51992258-51992277 | None:intergenic | 40.0% |
| !! | GATGATGGTGTTTTACTGCA+GGG | + | chr5_2:51992395-51992414 | None:intergenic | 40.0% |
| !!! | AATGTACCTGTTTTGGGTTG+CGG | + | chr5_2:51992491-51992510 | None:intergenic | 40.0% |
| GGCCGAATAACTACTATTTC+TGG | - | chr5_2:51992670-51992689 | Msa0775190:CDS | 40.0% | |
| ! | TTTCTGGAAACAAATGGGGA+AGG | - | chr5_2:51992686-51992705 | Msa0775190:CDS | 40.0% |
| ATTAAAAAGGGGGGGATGAT+TGG | - | chr5_2:51992879-51992898 | Msa0775190:intron | 40.0% | |
| GGGATGATTGGAACAACTAT+TGG | - | chr5_2:51992891-51992910 | Msa0775190:intron | 40.0% | |
| GGAACAACTATTGGACCTAA+AGG | - | chr5_2:51992900-51992919 | Msa0775190:intron | 40.0% | |
| AACTATTGGACCTAAAGGGA+TGG | - | chr5_2:51992905-51992924 | Msa0775190:intron | 40.0% | |
| GGATAAGAAGTTTGAGCAAG+AGG | - | chr5_2:51992971-51992990 | Msa0775190:intron | 40.0% | |
| ! | AGAAGCTTTGGTTTAGGATG+AGG | - | chr5_2:51992997-51993016 | Msa0775190:exon | 40.0% |
| TGAAGTTATTGGTGAGCTTC+AGG | - | chr5_2:51993022-51993041 | Msa0775190:five_prime_UTR | 40.0% | |
| ! | TGTGTTTGTTAAGCACACCT+GGG | + | chr5_2:51992257-51992276 | None:intergenic | 40.0% |
| ! | ATGTGTTTGTTAAGCACACC+TGG | + | chr5_2:51992258-51992277 | None:intergenic | 40.0% |
| !! | GATGATGGTGTTTTACTGCA+GGG | + | chr5_2:51992395-51992414 | None:intergenic | 40.0% |
| !!! | AATGTACCTGTTTTGGGTTG+CGG | + | chr5_2:51992491-51992510 | None:intergenic | 40.0% |
| GGCCGAATAACTACTATTTC+TGG | - | chr5_2:51992670-51992689 | Msa0775190:CDS | 40.0% | |
| ! | TTTCTGGAAACAAATGGGGA+AGG | - | chr5_2:51992686-51992705 | Msa0775190:CDS | 40.0% |
| ATTAAAAAGGGGGGGATGAT+TGG | - | chr5_2:51992879-51992898 | Msa0775190:intron | 40.0% | |
| GGGATGATTGGAACAACTAT+TGG | - | chr5_2:51992891-51992910 | Msa0775190:intron | 40.0% | |
| GGAACAACTATTGGACCTAA+AGG | - | chr5_2:51992900-51992919 | Msa0775190:intron | 40.0% | |
| AACTATTGGACCTAAAGGGA+TGG | - | chr5_2:51992905-51992924 | Msa0775190:intron | 40.0% | |
| GGATAAGAAGTTTGAGCAAG+AGG | - | chr5_2:51992971-51992990 | Msa0775190:intron | 40.0% | |
| ! | AGAAGCTTTGGTTTAGGATG+AGG | - | chr5_2:51992997-51993016 | Msa0775190:exon | 40.0% |
| TGAAGTTATTGGTGAGCTTC+AGG | - | chr5_2:51993022-51993041 | Msa0775190:five_prime_UTR | 40.0% | |
| TTTCACTCATTCCCAATCCC+AGG | - | chr5_2:51992237-51992256 | Msa0775190:three_prime_UTR | 45.0% | |
| TGTTAAGCACACCTGGGATT+GGG | + | chr5_2:51992251-51992270 | None:intergenic | 45.0% | |
| TTGTTAAGCACACCTGGGAT+TGG | + | chr5_2:51992252-51992271 | None:intergenic | 45.0% | |
| !! | CGATGATGGTGTTTTACTGC+AGG | + | chr5_2:51992396-51992415 | None:intergenic | 45.0% |
| !! | GTTTCGAAGAAGCGTTTACG+AGG | + | chr5_2:51992467-51992486 | None:intergenic | 45.0% |
| GAAACAAATGGGGAAGGCTT+TGG | - | chr5_2:51992692-51992711 | Msa0775190:CDS | 45.0% | |
| TTCAATGTCCACCAACCCAA+CGG | + | chr5_2:51992768-51992787 | None:intergenic | 45.0% | |
| TCTTTCTCTTCCTTCGGCAT+TGG | + | chr5_2:51992792-51992811 | None:intergenic | 45.0% | |
| TCCAGCTCTTTCTCTTCCTT+CGG | + | chr5_2:51992798-51992817 | None:intergenic | 45.0% | |
| ! | AGCTGGAGCATTTGTATCAG+CGG | - | chr5_2:51992811-51992830 | Msa0775190:CDS | 45.0% |
| TATTGGACCTAAAGGGATGG+TGG | - | chr5_2:51992908-51992927 | Msa0775190:intron | 45.0% | |
| TCATTCTCCACCATCCCTTT+AGG | + | chr5_2:51992918-51992937 | None:intergenic | 45.0% | |
| !! | AGGGATGGTGGAGAATGATA+TGG | - | chr5_2:51992920-51992939 | Msa0775190:intron | 45.0% |
| ! | AGGCTCAGAAGCTTTGGTTT+AGG | - | chr5_2:51992991-51993010 | Msa0775190:CDS | 45.0% |
| TATTGGTGAGCTTCAGGAGA+AGG | - | chr5_2:51993028-51993047 | Msa0775190:five_prime_UTR | 45.0% | |
| ATTGGTGAGCTTCAGGAGAA+GGG | - | chr5_2:51993029-51993048 | Msa0775190:five_prime_UTR | 45.0% | |
| CAAAGAAGCCAAATCCGATG+AGG | + | chr5_2:51993261-51993280 | None:intergenic | 45.0% | |
| !! | AGTGAGAGTGCTTCTGCAAA+CGG | + | chr5_2:51992182-51992201 | None:intergenic | 45.0% |
| TTTCACTCATTCCCAATCCC+AGG | - | chr5_2:51992237-51992256 | Msa0775190:three_prime_UTR | 45.0% | |
| TGTTAAGCACACCTGGGATT+GGG | + | chr5_2:51992251-51992270 | None:intergenic | 45.0% | |
| TTGTTAAGCACACCTGGGAT+TGG | + | chr5_2:51992252-51992271 | None:intergenic | 45.0% | |
| !! | CGATGATGGTGTTTTACTGC+AGG | + | chr5_2:51992396-51992415 | None:intergenic | 45.0% |
| !! | GTTTCGAAGAAGCGTTTACG+AGG | + | chr5_2:51992467-51992486 | None:intergenic | 45.0% |
| GAAACAAATGGGGAAGGCTT+TGG | - | chr5_2:51992692-51992711 | Msa0775190:CDS | 45.0% | |
| TTCAATGTCCACCAACCCAA+CGG | + | chr5_2:51992768-51992787 | None:intergenic | 45.0% | |
| TCTTTCTCTTCCTTCGGCAT+TGG | + | chr5_2:51992792-51992811 | None:intergenic | 45.0% | |
| TCCAGCTCTTTCTCTTCCTT+CGG | + | chr5_2:51992798-51992817 | None:intergenic | 45.0% | |
| ! | AGCTGGAGCATTTGTATCAG+CGG | - | chr5_2:51992811-51992830 | Msa0775190:CDS | 45.0% |
| TATTGGACCTAAAGGGATGG+TGG | - | chr5_2:51992908-51992927 | Msa0775190:intron | 45.0% | |
| TCATTCTCCACCATCCCTTT+AGG | + | chr5_2:51992918-51992937 | None:intergenic | 45.0% | |
| !! | AGGGATGGTGGAGAATGATA+TGG | - | chr5_2:51992920-51992939 | Msa0775190:intron | 45.0% |
| ! | AGGCTCAGAAGCTTTGGTTT+AGG | - | chr5_2:51992991-51993010 | Msa0775190:CDS | 45.0% |
| TATTGGTGAGCTTCAGGAGA+AGG | - | chr5_2:51993028-51993047 | Msa0775190:five_prime_UTR | 45.0% | |
| ATTGGTGAGCTTCAGGAGAA+GGG | - | chr5_2:51993029-51993048 | Msa0775190:five_prime_UTR | 45.0% | |
| CAAAGAAGCCAAATCCGATG+AGG | + | chr5_2:51993261-51993280 | None:intergenic | 45.0% | |
| !! | ATAAAATGTAAAAAATTATT+GGG | + | chr5_2:51992583-51992602 | None:intergenic | 5.0% |
| !! | ATAAAATGTAAAAAATTATT+GGG | + | chr5_2:51992583-51992602 | None:intergenic | 5.0% |
| GAAACACCGCAACCCAAAAC+AGG | - | chr5_2:51992482-51992501 | Msa0775190:CDS | 50.0% | |
| GCGTGCACTTATGCAGTGAT+GGG | - | chr5_2:51992714-51992733 | Msa0775190:CDS | 50.0% | |
| GACATTGAAGCCAATGCCGA+AGG | - | chr5_2:51992779-51992798 | Msa0775190:CDS | 50.0% | |
| AGCAAGAGGCTCAGAAGCTT+TGG | - | chr5_2:51992985-51993004 | Msa0775190:CDS | 50.0% | |
| GAAACACCGCAACCCAAAAC+AGG | - | chr5_2:51992482-51992501 | Msa0775190:CDS | 50.0% | |
| GCGTGCACTTATGCAGTGAT+GGG | - | chr5_2:51992714-51992733 | Msa0775190:CDS | 50.0% | |
| GACATTGAAGCCAATGCCGA+AGG | - | chr5_2:51992779-51992798 | Msa0775190:CDS | 50.0% | |
| AGCAAGAGGCTCAGAAGCTT+TGG | - | chr5_2:51992985-51993004 | Msa0775190:CDS | 50.0% | |
| GGCGTGCACTTATGCAGTGA+TGG | - | chr5_2:51992713-51992732 | Msa0775190:CDS | 55.0% | |
| ATTCAACGAGACGTCGCCGT+TGG | - | chr5_2:51992749-51992768 | Msa0775190:CDS | 55.0% | |
| TTCAACGAGACGTCGCCGTT+GGG | - | chr5_2:51992750-51992769 | Msa0775190:CDS | 55.0% | |
| GCCGAAGGAAGAGAAAGAGC+TGG | - | chr5_2:51992794-51992813 | Msa0775190:CDS | 55.0% | |
| GCGGCGTGAGTTTCCTTATC+CGG | - | chr5_2:51992830-51992849 | Msa0775190:intron | 55.0% | |
| CGGCGTGAGTTTCCTTATCC+GGG | - | chr5_2:51992831-51992850 | Msa0775190:intron | 55.0% | |
| GTTTCCTTATCCGGGAGACG+AGG | - | chr5_2:51992839-51992858 | Msa0775190:intron | 55.0% | |
| TCCATAGCTTCCTCGTCTCC+CGG | + | chr5_2:51992852-51992871 | None:intergenic | 55.0% | |
| GGCGTGCACTTATGCAGTGA+TGG | - | chr5_2:51992713-51992732 | Msa0775190:CDS | 55.0% | |
| ATTCAACGAGACGTCGCCGT+TGG | - | chr5_2:51992749-51992768 | Msa0775190:CDS | 55.0% | |
| TTCAACGAGACGTCGCCGTT+GGG | - | chr5_2:51992750-51992769 | Msa0775190:CDS | 55.0% | |
| GCCGAAGGAAGAGAAAGAGC+TGG | - | chr5_2:51992794-51992813 | Msa0775190:CDS | 55.0% | |
| GCGGCGTGAGTTTCCTTATC+CGG | - | chr5_2:51992830-51992849 | Msa0775190:intron | 55.0% | |
| CGGCGTGAGTTTCCTTATCC+GGG | - | chr5_2:51992831-51992850 | Msa0775190:intron | 55.0% | |
| GTTTCCTTATCCGGGAGACG+AGG | - | chr5_2:51992839-51992858 | Msa0775190:intron | 55.0% | |
| TCCATAGCTTCCTCGTCTCC+CGG | + | chr5_2:51992852-51992871 | None:intergenic | 55.0% | |
| !! | ATGCAGTGATGGGTGCAGCG+TGG | - | chr5_2:51992724-51992743 | Msa0775190:CDS | 60.0% |
| GCTTCCTCGTCTCCCGGATA+AGG | + | chr5_2:51992846-51992865 | None:intergenic | 60.0% | |
| TCCGGGAGACGAGGAAGCTA+TGG | - | chr5_2:51992848-51992867 | Msa0775190:intron | 60.0% | |
| GGGAGACGAGGAAGCTATGG+AGG | - | chr5_2:51992851-51992870 | Msa0775190:intron | 60.0% | |
| !! | ATGCAGTGATGGGTGCAGCG+TGG | - | chr5_2:51992724-51992743 | Msa0775190:CDS | 60.0% |
| GCTTCCTCGTCTCCCGGATA+AGG | + | chr5_2:51992846-51992865 | None:intergenic | 60.0% | |
| TCCGGGAGACGAGGAAGCTA+TGG | - | chr5_2:51992848-51992867 | Msa0775190:intron | 60.0% | |
| GGGAGACGAGGAAGCTATGG+AGG | - | chr5_2:51992851-51992870 | Msa0775190:intron | 60.0% | |
| ACGAGACGTCGCCGTTGGGT+TGG | - | chr5_2:51992754-51992773 | Msa0775190:CDS | 65.0% | |
| !! | AGACGTCGCCGTTGGGTTGG+TGG | - | chr5_2:51992757-51992776 | Msa0775190:CDS | 65.0% |
| ACGAGACGTCGCCGTTGGGT+TGG | - | chr5_2:51992754-51992773 | Msa0775190:CDS | 65.0% | |
| !! | AGACGTCGCCGTTGGGTTGG+TGG | - | chr5_2:51992757-51992776 | Msa0775190:CDS | 65.0% |
| Chromosome | Type | Strat | End | Strand | Name |
|---|---|---|---|---|---|
| chr5_2 | gene | 51992180 | 51993296 | 51992180 | ID=Msa0775190;Name=Msa0775190 |
| chr5_2 | mRNA | 51992180 | 51993296 | 51992180 | ID=Msa0775190-mRNA-1;Parent=Msa0775190;Name=Msa0775190-mRNA-1;_AED=0.00;_eAED=0.00;_QI=140|1|1|1|0.5|0.66|3|226|161 |
| chr5_2 | exon | 51992180 | 51992848 | 51992180 | ID=Msa0775190-mRNA-1:exon:15514;Parent=Msa0775190-mRNA-1 |
| chr5_2 | exon | 51992973 | 51993076 | 51992973 | ID=Msa0775190-mRNA-1:exon:15513;Parent=Msa0775190-mRNA-1 |
| chr5_2 | exon | 51993218 | 51993296 | 51993218 | ID=Msa0775190-mRNA-1:exon:15512;Parent=Msa0775190-mRNA-1 |
| chr5_2 | five_prime_UTR | 51993218 | 51993296 | 51993218 | ID=Msa0775190-mRNA-1:five_prime_utr;Parent=Msa0775190-mRNA-1 |
| chr5_2 | five_prime_UTR | 51993016 | 51993076 | 51993016 | ID=Msa0775190-mRNA-1:five_prime_utr;Parent=Msa0775190-mRNA-1 |
| chr5_2 | CDS | 51992973 | 51993015 | 51992973 | ID=Msa0775190-mRNA-1:cds;Parent=Msa0775190-mRNA-1 |
| chr5_2 | CDS | 51992406 | 51992848 | 51992406 | ID=Msa0775190-mRNA-1:cds;Parent=Msa0775190-mRNA-1 |
| chr5_2 | three_prime_UTR | 51992180 | 51992405 | 51992180 | ID=Msa0775190-mRNA-1:three_prime_utr;Parent=Msa0775190-mRNA-1 |
| Gene Sequence |
| Protein sequence |
