Alfalfa Gene Editing Database
Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
---|---|---|---|---|---|---|---|---|---|---|---|
Msa1375800 | XP_013458324.1 | 94.692 | 471 | 23 | 1 | 57 | 525 | 8 | 478 | 0.0 | 934 |
Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
---|---|---|---|---|---|---|---|---|---|---|---|
Msa1375800 | sp|Q9LSM9|SCP33_ARATH | 66.667 | 453 | 145 | 4 | 75 | 525 | 28 | 476 | 0.0 | 625 |
Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
---|---|---|---|---|---|---|---|---|---|---|---|
Msa1375800 | A0A072V2P9 | 94.692 | 471 | 23 | 1 | 57 | 525 | 8 | 478 | 0.0 | 934 |
Gene ID | Type | Classification |
---|
Gene ID | Type | Classification |
---|
Co-expression Network
Gene1 | Gene2 | correlation coefficient | p_value | FDR |
---|---|---|---|---|
Msa0014120 | Msa1375800 | 0.801660 | 8.106924e-49 | -8.615850e-47 |
Msa0015100 | Msa1375800 | 0.809864 | 1.532492e-50 | -8.615850e-47 |
Msa0049770 | Msa1375800 | 0.812716 | 3.685269e-51 | -8.615850e-47 |
Msa0063000 | Msa1375800 | 0.810805 | 9.600935e-51 | -8.615850e-47 |
Msa0078370 | Msa1375800 | 0.837355 | 5.459837e-57 | -8.615850e-47 |
Msa0093440 | Msa1375800 | 0.802104 | 6.571169e-49 | -8.615850e-47 |
Msa1375800 | Msa1376890 | 0.822317 | 2.526684e-53 | -8.615850e-47 |
Msa1375800 | Msa1438820 | 0.805865 | 1.086126e-49 | -8.615850e-47 |
Msa1375800 | Msa1445250 | 0.847506 | 1.108053e-59 | -8.615850e-47 |
Msa1375800 | Msa1457020 | 0.813806 | 2.123936e-51 | -8.615850e-47 |
Msa0635470 | Msa1375800 | 0.810426 | 1.159453e-50 | -8.615850e-47 |
Msa0641020 | Msa1375800 | 0.844800 | 6.038744e-59 | -8.615850e-47 |
Msa0641030 | Msa1375800 | 0.819747 | 9.872548e-53 | -8.615850e-47 |
Msa0658570 | Msa1375800 | 0.819055 | 1.419944e-52 | -8.615850e-47 |
Msa0679560 | Msa1375800 | 0.818273 | 2.136723e-52 | -8.615850e-47 |
Msa0703490 | Msa1375800 | 0.822548 | 2.233616e-53 | -8.615850e-47 |
Msa0718470 | Msa1375800 | 0.805176 | 1.514706e-49 | -8.615850e-47 |
Msa0724550 | Msa1375800 | 0.800842 | 1.191948e-48 | -8.615850e-47 |
Msa0801100 | Msa1375800 | 0.809087 | 2.249706e-50 | -8.615850e-47 |
Msa0839480 | Msa1375800 | 0.811121 | 8.202311e-51 | -8.615850e-47 |
Msa0140910 | Msa1375800 | 0.813040 | 3.130336e-51 | -8.615850e-47 |
Msa0213090 | Msa1375800 | 0.830168 | 3.419054e-55 | -8.615850e-47 |
Msa1246040 | Msa1375800 | 0.843343 | 1.485743e-58 | -8.615850e-47 |
Msa1254470 | Msa1375800 | 0.822419 | 2.393336e-53 | -8.615850e-47 |
Msa1298910 | Msa1375800 | 0.828230 | 1.008857e-54 | -8.615850e-47 |
Msa1330530 | Msa1375800 | 0.821335 | 4.265142e-53 | -8.615850e-47 |
Msa1064390 | Msa1375800 | 0.802891 | 4.523960e-49 | -8.615850e-47 |
Msa0253370 | Msa1375800 | 0.831407 | 1.699046e-55 | -8.615850e-47 |
Msa0261260 | Msa1375800 | 0.810629 | 1.048343e-50 | -8.615850e-47 |
Msa0290650 | Msa1375800 | 0.813543 | 2.426661e-51 | -8.615850e-47 |
Msa0299200 | Msa1375800 | 0.854411 | 1.253218e-61 | -8.615850e-47 |
Msa0330400 | Msa1375800 | 0.825776 | 3.898111e-54 | -8.615850e-47 |
Msa0336870 | Msa1375800 | 0.802285 | 6.033301e-49 | -8.615850e-47 |
Msa1208340 | Msa1375800 | 0.811017 | 8.638806e-51 | -8.615850e-47 |
Msa1209560 | Msa1375800 | 0.829077 | 6.297120e-55 | -8.615850e-47 |
Msa1219040 | Msa1375800 | 0.978971 | 5.914336e-147 | -8.615850e-47 |
Msa0544930 | Msa1375800 | 0.831747 | 1.400833e-55 | -8.615850e-47 |
Msa0567020 | Msa1375800 | 0.820903 | 5.363304e-53 | -8.615850e-47 |
Msa0883450 | Msa1375800 | 0.814351 | 1.610515e-51 | -8.615850e-47 |
PPI
Gene1 | Gene2 | Type |
---|
Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
---|---|---|---|---|---|---|---|---|---|---|---|
Msa1375800 | MtrunA17_Chr4g0068841 | 94.692 | 471 | 23 | 1 | 57 | 525 | 8 | 478 | 0.0 | 934 |
Msa1375800 | MtrunA17_Chr4g0068861 | 83.036 | 448 | 69 | 5 | 36 | 480 | 33 | 476 | 0.0 | 757 |
Msa1375800 | MtrunA17_Chr4g0047861 | 52.318 | 453 | 201 | 8 | 79 | 527 | 47 | 488 | 1.11e-167 | 483 |
Msa1375800 | MtrunA17_Chr2g0281621 | 51.121 | 446 | 205 | 6 | 84 | 527 | 34 | 468 | 3.26e-163 | 471 |
Msa1375800 | MtrunA17_Chr4g0038311 | 50.993 | 453 | 204 | 8 | 76 | 524 | 25 | 463 | 3.65e-159 | 461 |
Msa1375800 | MtrunA17_Chr7g0219051 | 46.639 | 476 | 231 | 7 | 58 | 526 | 7 | 466 | 6.66e-148 | 432 |
Msa1375800 | MtrunA17_Chr2g0309521 | 47.333 | 450 | 216 | 8 | 82 | 528 | 35 | 466 | 2.58e-142 | 418 |
Msa1375800 | MtrunA17_Chr2g0309541 | 44.118 | 476 | 237 | 7 | 57 | 528 | 17 | 467 | 3.68e-140 | 413 |
Msa1375800 | MtrunA17_Chr1g0199991 | 45.053 | 475 | 237 | 7 | 54 | 525 | 4 | 457 | 7.66e-140 | 411 |
Msa1375800 | MtrunA17_Chr2g0309511 | 45.556 | 450 | 224 | 7 | 82 | 528 | 35 | 466 | 1.68e-138 | 409 |
Msa1375800 | MtrunA17_Chr1g0199971 | 44.444 | 477 | 241 | 6 | 52 | 525 | 2 | 457 | 2.26e-138 | 407 |
Msa1375800 | MtrunA17_Chr3g0118881 | 46.785 | 451 | 204 | 7 | 84 | 525 | 76 | 499 | 1.28e-137 | 407 |
Msa1375800 | MtrunA17_Chr3g0118851 | 47.865 | 445 | 205 | 6 | 84 | 528 | 76 | 493 | 1.48e-137 | 407 |
Msa1375800 | MtrunA17_Chr2g0281641 | 50.000 | 396 | 180 | 5 | 138 | 527 | 7 | 390 | 3.26e-137 | 402 |
Msa1375800 | MtrunA17_Chr2g0318911 | 45.111 | 450 | 226 | 7 | 82 | 528 | 36 | 467 | 2.11e-136 | 403 |
Msa1375800 | MtrunA17_Chr1g0153881 | 44.494 | 445 | 216 | 4 | 82 | 526 | 86 | 499 | 3.70e-135 | 401 |
Msa1375800 | MtrunA17_Chr3g0118841 | 46.966 | 445 | 208 | 7 | 84 | 528 | 77 | 493 | 5.33e-134 | 398 |
Msa1375800 | MtrunA17_Chr3g0090331 | 45.011 | 451 | 221 | 8 | 79 | 527 | 68 | 493 | 3.54e-133 | 396 |
Msa1375800 | MtrunA17_Chr4g0020241 | 45.556 | 450 | 218 | 7 | 79 | 527 | 67 | 490 | 2.24e-132 | 394 |
Msa1375800 | MtrunA17_Chr1g0153941 | 42.050 | 478 | 223 | 5 | 75 | 527 | 67 | 515 | 2.35e-131 | 392 |
Msa1375800 | MtrunA17_Chr3g0118831 | 44.196 | 448 | 191 | 7 | 79 | 525 | 71 | 460 | 2.80e-124 | 372 |
Msa1375800 | MtrunA17_Chr3g0118891 | 44.719 | 445 | 187 | 8 | 84 | 528 | 76 | 461 | 4.37e-121 | 363 |
Msa1375800 | MtrunA17_Chr3g0118861 | 43.290 | 462 | 192 | 8 | 79 | 528 | 69 | 472 | 1.67e-119 | 360 |
Msa1375800 | MtrunA17_Chr5g0431301 | 38.571 | 490 | 255 | 13 | 56 | 528 | 6 | 466 | 8.11e-106 | 325 |
Msa1375800 | MtrunA17_Chr3g0126031 | 38.144 | 485 | 258 | 13 | 59 | 528 | 4 | 461 | 5.16e-105 | 322 |
Msa1375800 | MtrunA17_Chr3g0126051 | 38.509 | 483 | 262 | 11 | 60 | 528 | 7 | 468 | 5.65e-105 | 323 |
Msa1375800 | MtrunA17_Chr3g0131731 | 39.046 | 461 | 243 | 12 | 81 | 526 | 26 | 463 | 9.73e-103 | 317 |
Msa1375800 | MtrunA17_Chr3g0094811 | 39.565 | 460 | 233 | 15 | 82 | 526 | 27 | 456 | 3.61e-100 | 310 |
Msa1375800 | MtrunA17_Chr8g0385871 | 40.215 | 465 | 238 | 13 | 75 | 524 | 23 | 462 | 7.32e-99 | 306 |
Msa1375800 | MtrunA17_Chr7g0221551 | 37.526 | 485 | 257 | 13 | 56 | 524 | 3 | 457 | 5.34e-98 | 304 |
Msa1375800 | MtrunA17_Chr2g0304931 | 36.947 | 452 | 254 | 8 | 82 | 525 | 35 | 463 | 1.23e-97 | 303 |
Msa1375800 | MtrunA17_Chr8g0338461 | 31.992 | 497 | 292 | 14 | 58 | 520 | 8 | 492 | 2.87e-79 | 256 |
Msa1375800 | MtrunA17_Chr7g0234051 | 32.766 | 470 | 274 | 13 | 86 | 520 | 30 | 492 | 3.97e-78 | 253 |
Msa1375800 | MtrunA17_Chr7g0249431 | 33.006 | 509 | 278 | 16 | 58 | 523 | 10 | 498 | 6.49e-78 | 253 |
Msa1375800 | MtrunA17_Chr1g0153931 | 54.922 | 193 | 87 | 0 | 75 | 267 | 65 | 257 | 5.24e-71 | 228 |
Msa1375800 | MtrunA17_Chr1g0165811 | 45.714 | 245 | 116 | 5 | 80 | 317 | 25 | 259 | 3.79e-67 | 218 |
Msa1375800 | MtrunA17_Chr1g0204191 | 30.020 | 503 | 277 | 14 | 44 | 524 | 41 | 490 | 2.48e-61 | 209 |
Msa1375800 | MtrunA17_Chr7g0234041 | 31.603 | 443 | 241 | 14 | 86 | 487 | 27 | 448 | 6.01e-61 | 207 |
Msa1375800 | MtrunA17_Chr4g0009661 | 29.844 | 449 | 280 | 15 | 85 | 519 | 39 | 466 | 2.80e-54 | 190 |
Msa1375800 | MtrunA17_Chr2g0285351 | 29.399 | 449 | 288 | 14 | 89 | 523 | 36 | 469 | 5.81e-54 | 189 |
Msa1375800 | MtrunA17_Chr3g0133011 | 28.862 | 492 | 302 | 15 | 56 | 523 | 29 | 496 | 1.75e-53 | 188 |
Msa1375800 | MtrunA17_Chr2g0285371 | 28.348 | 448 | 285 | 14 | 89 | 519 | 37 | 465 | 1.81e-53 | 187 |
Msa1375800 | MtrunA17_Chr4g0009651 | 28.475 | 446 | 290 | 14 | 85 | 519 | 39 | 466 | 3.12e-53 | 187 |
Msa1375800 | MtrunA17_Chr4g0009701 | 28.764 | 445 | 290 | 12 | 85 | 519 | 39 | 466 | 4.30e-52 | 184 |
Msa1375800 | MtrunA17_Chr4g0009681 | 28.992 | 476 | 293 | 15 | 53 | 513 | 12 | 457 | 3.42e-51 | 181 |
Msa1375800 | MtrunA17_Chr2g0285381 | 28.959 | 442 | 283 | 13 | 89 | 519 | 40 | 461 | 4.11e-51 | 181 |
Msa1375800 | MtrunA17_Chr4g0009711 | 29.493 | 434 | 277 | 15 | 85 | 507 | 39 | 454 | 2.91e-50 | 179 |
Msa1375800 | MtrunA17_Chr3g0093971 | 27.571 | 457 | 285 | 12 | 81 | 519 | 22 | 450 | 1.56e-49 | 177 |
Msa1375800 | MtrunA17_Chr1g0153921 | 36.290 | 248 | 128 | 5 | 281 | 527 | 1 | 219 | 4.24e-48 | 166 |
Msa1375800 | MtrunA17_Chr4g0028271 | 27.500 | 440 | 273 | 13 | 93 | 521 | 90 | 494 | 3.87e-47 | 171 |
Msa1375800 | MtrunA17_Chr1g0199171 | 27.419 | 434 | 269 | 12 | 98 | 520 | 88 | 486 | 1.14e-44 | 164 |
Msa1375800 | MtrunA17_Chr4g0009671 | 27.356 | 435 | 285 | 15 | 97 | 519 | 16 | 431 | 1.75e-44 | 162 |
Msa1375800 | MtrunA17_Chr2g0327381 | 26.078 | 464 | 291 | 14 | 94 | 520 | 88 | 536 | 2.77e-44 | 164 |
Msa1375800 | MtrunA17_Chr4g0028261 | 27.130 | 446 | 272 | 15 | 91 | 521 | 109 | 516 | 1.40e-43 | 162 |
Msa1375800 | MtrunA17_Chr4g0028241 | 26.282 | 468 | 273 | 13 | 79 | 520 | 68 | 489 | 1.48e-43 | 161 |
Msa1375800 | MtrunA17_Chr2g0327401 | 26.444 | 450 | 272 | 13 | 94 | 525 | 94 | 502 | 1.79e-43 | 161 |
Msa1375800 | MtrunA17_Chr1g0171411 | 27.517 | 447 | 251 | 14 | 99 | 520 | 82 | 480 | 7.57e-42 | 156 |
Msa1375800 | MtrunA17_Chr4g0009641 | 27.273 | 484 | 288 | 18 | 48 | 519 | 11 | 442 | 7.33e-41 | 153 |
Msa1375800 | MtrunA17_Chr4g0028281 | 25.576 | 434 | 277 | 14 | 98 | 520 | 93 | 491 | 1.25e-40 | 153 |
Msa1375800 | MtrunA17_Chr5g0447441 | 26.498 | 434 | 258 | 11 | 102 | 518 | 43 | 432 | 2.33e-40 | 151 |
Msa1375800 | MtrunA17_Chr4g0009721 | 27.253 | 466 | 255 | 19 | 53 | 507 | 11 | 403 | 1.44e-38 | 146 |
Msa1375800 | MtrunA17_Chr4g0044051 | 27.230 | 426 | 265 | 13 | 102 | 518 | 47 | 436 | 9.34e-37 | 141 |
Msa1375800 | MtrunA17_Chr2g0327371 | 24.832 | 447 | 287 | 12 | 103 | 520 | 86 | 512 | 1.09e-35 | 139 |
Msa1375800 | MtrunA17_Chr4g0068851 | 100.000 | 47 | 0 | 0 | 479 | 525 | 15 | 61 | 4.58e-27 | 103 |
Msa1375800 | MtrunA17_Chr2g0279371 | 34.146 | 205 | 99 | 9 | 52 | 251 | 8 | 181 | 1.76e-23 | 97.8 |
Msa1375800 | MtrunA17_Chr7g0229631 | 46.939 | 98 | 48 | 3 | 76 | 173 | 24 | 117 | 3.18e-21 | 90.1 |
Msa1375800 | MtrunA17_Chr1g0165821 | 28.824 | 170 | 111 | 3 | 360 | 524 | 14 | 178 | 3.83e-21 | 90.9 |
Msa1375800 | MtrunA17_Chr4g0027731 | 25.113 | 442 | 281 | 18 | 103 | 518 | 36 | 453 | 5.51e-19 | 89.7 |
Msa1375800 | MtrunA17_Chr7g0229621 | 45.349 | 86 | 45 | 2 | 76 | 161 | 16 | 99 | 6.63e-18 | 79.3 |
Msa1375800 | MtrunA17_Chr2g0281631 | 44.156 | 77 | 41 | 2 | 62 | 138 | 23 | 97 | 1.08e-17 | 79.3 |
Msa1375800 | MtrunA17_Chr7g0229611 | 43.023 | 86 | 47 | 2 | 76 | 161 | 16 | 99 | 8.08e-17 | 76.3 |
Msa1375800 | MtrunA17_Chr2g0320571 | 26.374 | 455 | 266 | 21 | 103 | 516 | 36 | 462 | 8.00e-15 | 77.0 |
Msa1375800 | MtrunA17_Chr8g0358501 | 46.667 | 60 | 30 | 2 | 281 | 338 | 1 | 60 | 1.60e-11 | 60.8 |
Msa1375800 | MtrunA17_Chr5g0405141 | 46.667 | 60 | 30 | 2 | 281 | 338 | 1 | 60 | 1.60e-11 | 60.8 |
Msa1375800 | MtrunA17_Chr5g0447851 | 46.667 | 60 | 30 | 2 | 281 | 338 | 1 | 60 | 1.60e-11 | 60.8 |
Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
---|---|---|---|---|---|---|---|---|---|---|---|
Msa1375800 | AT3G17180.1 | 66.667 | 453 | 145 | 4 | 75 | 525 | 28 | 476 | 0.0 | 625 |
Msa1375800 | AT3G17180.2 | 65.602 | 407 | 135 | 3 | 75 | 480 | 28 | 430 | 0.0 | 557 |
Msa1375800 | AT1G11080.1 | 50.728 | 481 | 223 | 7 | 54 | 527 | 19 | 492 | 5.77e-168 | 485 |
Msa1375800 | AT1G11080.2 | 50.728 | 481 | 223 | 7 | 54 | 527 | 19 | 492 | 8.85e-168 | 484 |
Msa1375800 | AT4G15100.1 | 50.993 | 453 | 206 | 8 | 82 | 527 | 41 | 484 | 1.65e-167 | 483 |
Msa1375800 | AT5G23210.1 | 52.402 | 458 | 205 | 7 | 78 | 526 | 44 | 497 | 7.43e-167 | 482 |
Msa1375800 | AT1G61130.1 | 51.225 | 449 | 199 | 7 | 84 | 527 | 30 | 463 | 1.10e-163 | 473 |
Msa1375800 | AT4G30610.1 | 49.469 | 471 | 220 | 8 | 56 | 524 | 8 | 462 | 1.48e-155 | 452 |
Msa1375800 | AT2G24000.1 | 50.562 | 445 | 206 | 8 | 82 | 523 | 27 | 460 | 9.36e-149 | 435 |
Msa1375800 | AT2G24010.1 | 47.748 | 444 | 212 | 4 | 82 | 524 | 27 | 451 | 2.37e-146 | 428 |
Msa1375800 | AT5G08260.1 | 45.303 | 479 | 249 | 8 | 56 | 527 | 7 | 479 | 4.05e-146 | 429 |
Msa1375800 | AT5G23210.3 | 50.971 | 412 | 189 | 7 | 78 | 480 | 44 | 451 | 7.76e-145 | 424 |
Msa1375800 | AT3G02110.1 | 46.269 | 469 | 242 | 7 | 57 | 524 | 12 | 471 | 1.67e-144 | 424 |
Msa1375800 | AT2G35780.1 | 47.758 | 446 | 210 | 6 | 82 | 524 | 26 | 451 | 7.47e-142 | 417 |
Msa1375800 | AT2G24010.2 | 45.969 | 459 | 213 | 5 | 82 | 524 | 27 | 466 | 4.71e-141 | 415 |
Msa1375800 | AT3G07990.1 | 48.198 | 444 | 209 | 8 | 84 | 524 | 32 | 457 | 1.30e-139 | 411 |
Msa1375800 | AT5G23210.5 | 51.500 | 400 | 182 | 6 | 135 | 525 | 5 | 401 | 2.71e-138 | 406 |
Msa1375800 | AT5G23210.2 | 51.515 | 396 | 180 | 6 | 139 | 525 | 8 | 400 | 2.86e-137 | 403 |
Msa1375800 | AT4G30810.1 | 44.469 | 452 | 235 | 4 | 75 | 525 | 27 | 463 | 1.04e-136 | 404 |
Msa1375800 | AT2G24010.3 | 43.542 | 480 | 211 | 6 | 86 | 524 | 2 | 462 | 5.24e-134 | 397 |
Msa1375800 | AT2G35770.1 | 44.375 | 480 | 234 | 10 | 50 | 525 | 9 | 459 | 1.35e-131 | 391 |
Msa1375800 | AT3G63470.1 | 43.043 | 460 | 227 | 8 | 71 | 524 | 67 | 497 | 4.02e-126 | 378 |
Msa1375800 | AT5G23210.4 | 49.573 | 351 | 165 | 6 | 139 | 480 | 8 | 355 | 3.66e-115 | 345 |
Msa1375800 | AT2G05850.1 | 40.851 | 470 | 245 | 9 | 63 | 524 | 40 | 484 | 7.08e-115 | 349 |
Msa1375800 | AT3G52020.1 | 40.940 | 447 | 236 | 9 | 82 | 524 | 76 | 498 | 1.58e-112 | 343 |
Msa1375800 | AT1G43780.1 | 39.479 | 461 | 241 | 10 | 84 | 528 | 36 | 474 | 2.00e-107 | 329 |
Msa1375800 | AT3G52000.1 | 39.374 | 447 | 240 | 9 | 82 | 524 | 60 | 479 | 7.16e-106 | 325 |
Msa1375800 | AT2G24010.4 | 44.385 | 374 | 173 | 5 | 86 | 443 | 2 | 356 | 2.81e-105 | 320 |
Msa1375800 | AT3G52010.1 | 38.753 | 449 | 244 | 7 | 82 | 524 | 61 | 484 | 1.13e-104 | 323 |
Msa1375800 | AT5G42240.1 | 39.783 | 460 | 242 | 11 | 79 | 524 | 26 | 464 | 1.28e-101 | 314 |
Msa1375800 | AT2G33530.1 | 39.130 | 460 | 236 | 11 | 82 | 524 | 30 | 462 | 1.91e-101 | 313 |
Msa1375800 | AT2G12480.3 | 38.430 | 484 | 260 | 13 | 51 | 524 | 2 | 457 | 2.81e-100 | 310 |
Msa1375800 | AT1G28110.1 | 39.168 | 457 | 236 | 10 | 83 | 524 | 29 | 458 | 3.86e-98 | 305 |
Msa1375800 | AT1G28110.2 | 39.168 | 457 | 236 | 10 | 83 | 524 | 29 | 458 | 3.86e-98 | 305 |
Msa1375800 | AT2G12480.4 | 37.552 | 482 | 243 | 13 | 51 | 524 | 2 | 433 | 5.33e-96 | 299 |
Msa1375800 | AT5G42230.1 | 38.147 | 464 | 244 | 13 | 79 | 524 | 22 | 460 | 3.01e-95 | 298 |
Msa1375800 | AT5G42230.2 | 38.147 | 464 | 244 | 13 | 79 | 524 | 22 | 460 | 3.01e-95 | 298 |
Msa1375800 | AT2G12480.1 | 37.137 | 482 | 243 | 13 | 51 | 524 | 2 | 431 | 4.00e-94 | 294 |
Msa1375800 | AT2G12480.2 | 37.060 | 483 | 243 | 14 | 51 | 524 | 2 | 432 | 2.72e-92 | 289 |
Msa1375800 | AT4G12910.1 | 34.791 | 503 | 280 | 17 | 56 | 523 | 8 | 497 | 9.78e-87 | 276 |
Msa1375800 | AT3G25420.1 | 34.884 | 473 | 265 | 13 | 86 | 523 | 30 | 494 | 2.80e-84 | 270 |
Msa1375800 | AT4G12910.2 | 34.056 | 461 | 257 | 16 | 56 | 482 | 8 | 455 | 6.37e-76 | 247 |
Msa1375800 | AT2G24000.2 | 44.637 | 289 | 148 | 6 | 237 | 523 | 119 | 397 | 1.08e-73 | 239 |
Msa1375800 | AT2G24000.2 | 58.000 | 100 | 40 | 2 | 74 | 172 | 19 | 117 | 2.38e-28 | 117 |
Msa1375800 | AT2G22990.1 | 29.730 | 444 | 267 | 12 | 89 | 523 | 26 | 433 | 2.18e-58 | 200 |
Msa1375800 | AT3G56540.1 | 57.233 | 159 | 66 | 2 | 82 | 240 | 76 | 232 | 2.45e-57 | 192 |
Msa1375800 | AT3G45010.1 | 27.947 | 526 | 332 | 14 | 19 | 527 | 11 | 506 | 3.21e-55 | 194 |
Msa1375800 | AT1G73280.1 | 29.474 | 475 | 285 | 14 | 61 | 523 | 5 | 441 | 4.31e-55 | 191 |
Msa1375800 | AT1G73270.2 | 30.290 | 449 | 262 | 14 | 86 | 523 | 33 | 441 | 8.37e-55 | 191 |
Msa1375800 | AT1G73270.1 | 30.290 | 449 | 262 | 14 | 86 | 523 | 33 | 441 | 1.13e-54 | 191 |
Msa1375800 | AT2G22990.3 | 29.833 | 419 | 250 | 11 | 89 | 498 | 26 | 409 | 1.37e-54 | 191 |
Msa1375800 | AT2G22990.4 | 29.904 | 418 | 249 | 11 | 89 | 497 | 26 | 408 | 2.71e-54 | 189 |
Msa1375800 | AT2G22920.2 | 29.663 | 445 | 266 | 11 | 89 | 523 | 28 | 435 | 4.61e-54 | 189 |
Msa1375800 | AT2G22970.1 | 29.438 | 445 | 265 | 13 | 89 | 523 | 28 | 433 | 3.49e-53 | 186 |
Msa1375800 | AT3G10450.1 | 30.958 | 449 | 259 | 13 | 86 | 523 | 29 | 437 | 7.56e-53 | 186 |
Msa1375800 | AT3G12203.1 | 29.400 | 483 | 283 | 14 | 50 | 523 | 4 | 437 | 2.75e-52 | 184 |
Msa1375800 | AT2G22990.5 | 28.829 | 444 | 262 | 13 | 89 | 523 | 26 | 424 | 4.94e-52 | 183 |
Msa1375800 | AT3G12203.3 | 30.180 | 444 | 262 | 13 | 89 | 523 | 12 | 416 | 5.11e-52 | 182 |
Msa1375800 | AT1G33540.1 | 29.605 | 456 | 283 | 13 | 86 | 523 | 29 | 464 | 6.63e-52 | 184 |
Msa1375800 | AT1G73290.1 | 30.769 | 442 | 261 | 15 | 89 | 523 | 35 | 438 | 7.03e-52 | 183 |
Msa1375800 | AT1G73300.1 | 29.399 | 449 | 260 | 14 | 89 | 523 | 36 | 441 | 1.07e-51 | 182 |
Msa1375800 | AT1G73300.2 | 29.399 | 449 | 260 | 14 | 89 | 523 | 36 | 441 | 1.07e-51 | 182 |
Msa1375800 | AT2G23000.1 | 28.508 | 449 | 274 | 12 | 86 | 523 | 25 | 437 | 1.42e-51 | 182 |
Msa1375800 | AT2G23000.2 | 28.508 | 449 | 274 | 12 | 86 | 523 | 25 | 437 | 1.42e-51 | 182 |
Msa1375800 | AT2G22980.1 | 28.153 | 444 | 268 | 12 | 89 | 523 | 29 | 430 | 6.31e-51 | 180 |
Msa1375800 | AT3G10450.2 | 31.090 | 431 | 246 | 13 | 104 | 523 | 4 | 394 | 1.22e-50 | 178 |
Msa1375800 | AT5G36180.1 | 29.425 | 452 | 262 | 14 | 86 | 523 | 33 | 441 | 3.25e-50 | 178 |
Msa1375800 | AT1G33540.2 | 29.224 | 438 | 272 | 13 | 104 | 523 | 4 | 421 | 1.75e-49 | 176 |
Msa1375800 | AT2G22920.1 | 29.803 | 406 | 240 | 9 | 89 | 485 | 28 | 397 | 5.64e-49 | 174 |
Msa1375800 | AT2G22970.3 | 29.216 | 421 | 250 | 12 | 89 | 499 | 28 | 410 | 1.01e-48 | 174 |
Msa1375800 | AT2G22970.4 | 29.048 | 420 | 250 | 12 | 89 | 498 | 28 | 409 | 2.86e-48 | 172 |
Msa1375800 | AT3G12203.2 | 30.144 | 418 | 244 | 13 | 115 | 523 | 1 | 379 | 3.00e-48 | 172 |
Msa1375800 | AT1G73310.1 | 28.508 | 449 | 264 | 14 | 89 | 523 | 36 | 441 | 3.52e-48 | 173 |
Msa1375800 | AT2G22980.2 | 28.162 | 419 | 251 | 11 | 89 | 498 | 29 | 406 | 6.34e-48 | 171 |
Msa1375800 | AT3G10450.4 | 30.660 | 424 | 244 | 12 | 86 | 498 | 29 | 413 | 6.99e-48 | 171 |
Msa1375800 | AT2G22980.4 | 27.869 | 427 | 258 | 11 | 89 | 506 | 29 | 414 | 8.19e-48 | 172 |
Msa1375800 | AT3G10410.1 | 27.664 | 441 | 268 | 13 | 91 | 518 | 90 | 492 | 9.38e-48 | 174 |
Msa1375800 | AT2G23010.1 | 26.971 | 482 | 290 | 14 | 57 | 523 | 3 | 437 | 1.07e-47 | 172 |
Msa1375800 | AT2G23010.2 | 26.763 | 482 | 291 | 14 | 57 | 523 | 3 | 437 | 4.38e-47 | 170 |
Msa1375800 | AT5G09640.1 | 28.211 | 436 | 273 | 13 | 86 | 500 | 27 | 443 | 2.41e-46 | 169 |
Msa1375800 | AT3G12220.1 | 29.018 | 448 | 269 | 11 | 86 | 523 | 27 | 435 | 2.78e-46 | 167 |
Msa1375800 | AT1G73290.3 | 30.521 | 403 | 237 | 13 | 89 | 485 | 35 | 400 | 3.10e-46 | 167 |
Msa1375800 | AT3G10450.3 | 30.788 | 406 | 231 | 12 | 104 | 498 | 4 | 370 | 1.54e-45 | 164 |
Msa1375800 | AT5G22980.1 | 27.790 | 439 | 270 | 15 | 93 | 520 | 91 | 493 | 1.98e-45 | 167 |
Msa1375800 | AT3G12230.1 | 29.241 | 448 | 268 | 13 | 86 | 523 | 27 | 435 | 1.11e-44 | 163 |
Msa1375800 | AT3G12220.2 | 28.837 | 430 | 257 | 11 | 104 | 523 | 15 | 405 | 2.29e-44 | 162 |
Msa1375800 | AT3G12240.1 | 28.667 | 450 | 268 | 13 | 86 | 523 | 28 | 436 | 6.70e-44 | 161 |
Msa1375800 | AT1G73310.2 | 28.851 | 409 | 236 | 12 | 89 | 484 | 36 | 402 | 1.15e-43 | 160 |
Msa1375800 | AT2G22920.4 | 35.115 | 262 | 159 | 5 | 89 | 342 | 28 | 286 | 6.58e-42 | 152 |
Msa1375800 | AT1G73280.2 | 32.765 | 293 | 183 | 7 | 61 | 342 | 5 | 294 | 3.68e-41 | 152 |
Msa1375800 | AT1G73290.2 | 37.273 | 220 | 130 | 4 | 89 | 303 | 35 | 251 | 2.92e-39 | 145 |
Msa1375800 | AT2G22970.2 | 33.588 | 262 | 162 | 6 | 89 | 342 | 28 | 285 | 3.12e-39 | 145 |
Msa1375800 | AT2G22980.3 | 32.955 | 264 | 159 | 6 | 89 | 342 | 29 | 284 | 9.36e-38 | 142 |
Msa1375800 | AT2G22990.6 | 27.479 | 353 | 217 | 10 | 175 | 523 | 2 | 319 | 1.25e-36 | 138 |
Msa1375800 | AT1G15000.1 | 27.315 | 432 | 262 | 14 | 102 | 523 | 37 | 426 | 4.37e-36 | 140 |
Msa1375800 | AT2G22990.2 | 27.195 | 353 | 218 | 10 | 175 | 523 | 2 | 319 | 4.57e-36 | 137 |
Msa1375800 | AT1G73280.4 | 27.855 | 359 | 218 | 11 | 169 | 523 | 18 | 339 | 5.38e-35 | 134 |
Msa1375800 | AT3G12220.3 | 35.268 | 224 | 135 | 5 | 86 | 303 | 27 | 246 | 7.28e-33 | 129 |
Msa1375800 | AT1G73280.3 | 27.635 | 351 | 213 | 11 | 177 | 523 | 1 | 314 | 3.20e-32 | 126 |
Msa1375800 | AT5G36180.5 | 27.473 | 364 | 213 | 12 | 169 | 523 | 18 | 339 | 1.04e-31 | 125 |
Msa1375800 | AT5G36180.3 | 27.473 | 364 | 213 | 12 | 169 | 523 | 18 | 339 | 1.04e-31 | 125 |
Msa1375800 | AT5G22960.1 | 35.196 | 179 | 93 | 4 | 85 | 263 | 19 | 174 | 1.43e-27 | 109 |
Msa1375800 | AT2G22980.5 | 25.305 | 328 | 201 | 9 | 175 | 498 | 2 | 289 | 3.15e-27 | 111 |
Msa1375800 | AT5G36180.2 | 26.844 | 339 | 198 | 11 | 169 | 498 | 18 | 315 | 3.31e-27 | 112 |
Msa1375800 | AT5G36180.4 | 26.536 | 358 | 207 | 11 | 169 | 513 | 18 | 332 | 1.82e-26 | 110 |
Msa1375800 | AT1G73310.3 | 26.140 | 329 | 194 | 10 | 164 | 484 | 13 | 300 | 9.12e-26 | 108 |
Msa1375800 | AT2G27920.1 | 23.356 | 441 | 284 | 16 | 103 | 514 | 37 | 452 | 1.08e-18 | 89.4 |
Msa1375800 | AT2G22960.1 | 30.469 | 128 | 85 | 3 | 397 | 523 | 60 | 184 | 3.39e-13 | 68.6 |
Find 117 sgRNAs with CRISPR-Local
Find 482 sgRNAs with CRISPR-GE
CRISPR-Local
sgRNA_sequence | on_target_score | Position | Region |
---|---|---|---|
AACACCTTTATTAATCTTAA+AGG | 0.112312 | tig0019745:+100557 | Msa1375800:CDS |
TCATAGTAATCTTCAGTTTC+TGG | 0.116767 | tig0019745:-100958 | None:intergenic |
TTGCTCGCAGTTGCGAGTTC+TGG | 0.169028 | tig0019745:+94460 | Msa1375800:CDS |
CCAGAGAAGGAGAGGTTTAT+TGG | 0.191451 | tig0019745:-99369 | None:intergenic |
AAACCTTGATTCCAAGAGTA+TGG | 0.242904 | tig0019745:-99784 | None:intergenic |
ATGTTAGTCCTTCACCATTT+TGG | 0.253170 | tig0019745:-99756 | None:intergenic |
TCTACCTTGGAAAATGATTC+AGG | 0.260931 | tig0019745:-101207 | None:intergenic |
CTTATTCATTCTTTCCTAAC+TGG | 0.264101 | tig0019745:+102789 | Msa1375800:CDS |
CCTACAATTTCTTGGTGAAT+TGG | 0.271062 | tig0019745:+100175 | Msa1375800:CDS |
GCCTTAAGATATGGATTTAC+AGG | 0.283869 | tig0019745:+101740 | Msa1375800:CDS |
TGCTCGCAGTTGCGAGTTCT+GGG | 0.294848 | tig0019745:+94461 | Msa1375800:CDS |
TTTGATGAGTTTGGTGTAGA+TGG | 0.323218 | tig0019745:-101713 | None:intergenic |
TAACCTGAAAAGTGTGAAAT+TGG | 0.324453 | tig0019745:-99278 | None:intergenic |
GTGTATCAATATAATCAAAA+AGG | 0.326786 | tig0019745:+102937 | Msa1375800:three_prime_UTR |
GGCGAGCAAAGTGTGCATTC+TGG | 0.330016 | tig0019745:+94356 | Msa1375800:CDS |
AAAACCTTTAAGATTAATAA+AGG | 0.334038 | tig0019745:-100561 | None:intergenic |
TGTGACTTAATTTAATAGAT+TGG | 0.335938 | tig0019745:-102880 | None:intergenic |
AAGGCCACCTTTGATGAGTT+TGG | 0.339294 | tig0019745:-101722 | None:intergenic |
TGAGGATGCCTACAATTTCT+TGG | 0.340044 | tig0019745:+100167 | Msa1375800:CDS |
AAACAAACATGTAGATTTCA+TGG | 0.345312 | tig0019745:-103000 | None:intergenic |
CGATATTGTGTTGAGGCATT+AGG | 0.346404 | tig0019745:+102201 | Msa1375800:CDS |
GATCTCCAAGTAGACTTTAG+AGG | 0.351455 | tig0019745:-102228 | None:intergenic |
CCAATAAACCTCTCCTTCTC+TGG | 0.363351 | tig0019745:+99369 | Msa1375800:CDS |
AATAGAGGACCTGATTATTA+TGG | 0.363598 | tig0019745:-102257 | None:intergenic |
GGATGCTCCTCAATTGGATA+TGG | 0.380521 | tig0019745:+99700 | Msa1375800:CDS |
TCAAAGGTGGCCTTAAGATA+TGG | 0.384822 | tig0019745:+101731 | Msa1375800:CDS |
AGAAGCAAATTTGTTATTTG+TGG | 0.388540 | tig0019745:+99970 | Msa1375800:intron |
GATGATCATGGACGTATAGT+AGG | 0.395363 | tig0019745:-102822 | None:intergenic |
AACCCATACTCTTGGAATCA+AGG | 0.399186 | tig0019745:+99781 | Msa1375800:CDS |
GAAGTTGTAAGTCCTCAATA+TGG | 0.403385 | tig0019745:-101671 | None:intergenic |
TTAAAACAAAGAAACATATT+AGG | 0.406269 | tig0019745:-99157 | None:intergenic |
CCAATTCACCAAGAAATTGT+AGG | 0.412556 | tig0019745:-100175 | None:intergenic |
GCAGGTTGGAGGAAGGATAG+TGG | 0.413209 | tig0019745:+102686 | Msa1375800:intron |
TAAAGTCTACTTGGAGATCT+TGG | 0.417999 | tig0019745:+102232 | Msa1375800:CDS |
ACCTGTAAATCCATATCTTA+AGG | 0.420489 | tig0019745:-101741 | None:intergenic |
GGACCTGGATGCTCCTCAAT+TGG | 0.424061 | tig0019745:+99694 | Msa1375800:intron |
CCTCTCCTTCTCTGGCTCAA+TGG | 0.426524 | tig0019745:+99377 | Msa1375800:CDS |
GATGGCAGACTACCTGTGAT+AGG | 0.427462 | tig0019745:+102174 | Msa1375800:CDS |
GCGAGCAAAGTGTGCATTCT+GGG | 0.432053 | tig0019745:+94357 | Msa1375800:CDS |
TTGCGAGTGTTCTTGCTCGC+AGG | 0.432674 | tig0019745:+94497 | Msa1375800:CDS |
GACTCCATGCATATTCTAGA+AGG | 0.432732 | tig0019745:-100990 | None:intergenic |
AGTGAGATCAGAAGAGGTAT+TGG | 0.440147 | tig0019745:-100023 | None:intergenic |
TATCAATTTCTGAGTAATCA+TGG | 0.448420 | tig0019745:-101116 | None:intergenic |
CTTCAAAGAACCAATAGAAA+AGG | 0.464372 | tig0019745:-99331 | None:intergenic |
ATCTTGGTACCATAATAATC+AGG | 0.468032 | tig0019745:+102248 | Msa1375800:CDS |
GACTACCTCTAAAGTCTACT+TGG | 0.468519 | tig0019745:+102223 | Msa1375800:CDS |
GAATTCATTCATGATGATCA+TGG | 0.474075 | tig0019745:-102834 | None:intergenic |
TAACATTCAACCCATACTCT+TGG | 0.474372 | tig0019745:+99773 | Msa1375800:CDS |
TATGGTGCTGTTGTTGAGAT+AGG | 0.477166 | tig0019745:+99718 | Msa1375800:CDS |
ATCACTGTCAATGAAGATCA+TGG | 0.479403 | tig0019745:+99302 | Msa1375800:CDS |
GTGGAGTCACCCATTGGAGT+TGG | 0.482769 | tig0019745:+99989 | Msa1375800:CDS |
ATGGTCTAATGAGTGCAATC+AGG | 0.483081 | tig0019745:+101077 | Msa1375800:CDS |
TAGGGAGATGATCTCCAGTT+AGG | 0.484012 | tig0019745:-102803 | None:intergenic |
TATTGATACACCAGCAAATG+AGG | 0.486105 | tig0019745:-102925 | None:intergenic |
TTATTTGTGGAGTCACCCAT+TGG | 0.489508 | tig0019745:+99983 | Msa1375800:CDS |
GGAAGGATAGTGGAGTATGA+AGG | 0.491007 | tig0019745:+102696 | Msa1375800:CDS |
GATTTCCACAGTTTAAATCC+AGG | 0.503025 | tig0019745:+100205 | Msa1375800:CDS |
TATCCAATTGAGGAGCATCC+AGG | 0.510961 | tig0019745:-99697 | None:intergenic |
ATAATGTAACCCTCATTTGC+TGG | 0.512291 | tig0019745:+102915 | Msa1375800:three_prime_UTR |
GCCTCAGTTGGTTTGTTGAG+AGG | 0.512490 | tig0019745:-102759 | None:intergenic |
CTGCAAGCTGAGGGATATAG+TGG | 0.516994 | tig0019745:-100499 | None:intergenic |
GTGAGCTCGCAACTGCGAGC+AGG | 0.518933 | tig0019745:-94412 | None:intergenic |
TTCAAAGAACCAATAGAAAA+GGG | 0.520725 | tig0019745:-99330 | None:intergenic |
CTACCTTGGAAAATGATTCA+GGG | 0.521127 | tig0019745:-101206 | None:intergenic |
ATAGCAGGAGAAAGCTATGC+TGG | 0.522630 | tig0019745:+100237 | Msa1375800:CDS |
AAAGCATCTGAAATAAATGT+TGG | 0.522670 | tig0019745:+99203 | Msa1375800:CDS |
AGAAGGAGAGGTTTATTGGA+GGG | 0.531052 | tig0019745:-99365 | None:intergenic |
AACCTTGATTCCAAGAGTAT+GGG | 0.534967 | tig0019745:-99783 | None:intergenic |
ATGAATGGAATGCAGGTTGG+AGG | 0.537003 | tig0019745:+102675 | Msa1375800:intron |
AATCTATTAAATTAAGTCAC+AGG | 0.540629 | tig0019745:+102882 | Msa1375800:three_prime_UTR |
AAGAAAACAATAACATAGCA+TGG | 0.541066 | tig0019745:+101532 | Msa1375800:CDS |
ATTTCCACAGTTTAAATCCA+GGG | 0.543200 | tig0019745:+100206 | Msa1375800:CDS |
AAACAATAACATAGCATGGA+AGG | 0.547773 | tig0019745:+101536 | Msa1375800:CDS |
CTCCTTCTCTGGCTCAATGG+AGG | 0.548120 | tig0019745:+99380 | Msa1375800:CDS |
ATGGAATGCAGGTTGGAGGA+AGG | 0.549335 | tig0019745:+102679 | Msa1375800:intron |
GCTCGCAGTTGCGAGCTCAC+AGG | 0.549443 | tig0019745:+94415 | Msa1375800:CDS |
TATGTGACAGTGAGAGGAGC+TGG | 0.554988 | tig0019745:+102726 | Msa1375800:CDS |
TGAGTTTGGTGTAGATGGGC+AGG | 0.558897 | tig0019745:-101708 | None:intergenic |
ATGATCATGGACGTATAGTA+GGG | 0.561185 | tig0019745:-102821 | None:intergenic |
TTAGTCAACCAAAATGGTGA+AGG | 0.569534 | tig0019745:+99748 | Msa1375800:CDS |
AAGATTAACTCTGCAAGCTG+AGG | 0.573791 | tig0019745:-100509 | None:intergenic |
AAGGCCTTCTAGAATATGCA+TGG | 0.576001 | tig0019745:+100986 | Msa1375800:CDS |
GGTGGTGTCGAAGGTTGTCC+TGG | 0.577699 | tig0019745:-99257 | None:intergenic |
CCTGAAAAGTGTGAAATTGG+TGG | 0.577902 | tig0019745:-99275 | None:intergenic |
TTGATGAGTTTGGTGTAGAT+GGG | 0.579382 | tig0019745:-101712 | None:intergenic |
GAGAAGGAGAGGTTTATTGG+AGG | 0.580591 | tig0019745:-99366 | None:intergenic |
CCATTGAGCCAGAGAAGGAG+AGG | 0.585851 | tig0019745:-99377 | None:intergenic |
TTGACATATGTGACAGTGAG+AGG | 0.587941 | tig0019745:+102720 | Msa1375800:CDS |
TGTGAAATTGGTGGTGTCGA+AGG | 0.589267 | tig0019745:-99266 | None:intergenic |
TAAAATAGTGAGATCAGAAG+AGG | 0.589307 | tig0019745:-100029 | None:intergenic |
AACAGCACCATATCCAATTG+AGG | 0.590506 | tig0019745:-99707 | None:intergenic |
AGATTAACTCTGCAAGCTGA+GGG | 0.592878 | tig0019745:-100508 | None:intergenic |
CAATATCGTGTCCCTATCAC+AGG | 0.593552 | tig0019745:-102186 | None:intergenic |
TCACTGTCAATGAAGATCAT+GGG | 0.594629 | tig0019745:+99303 | Msa1375800:CDS |
CACCTCCATTGAGCCAGAGA+AGG | 0.598697 | tig0019745:-99382 | None:intergenic |
TGCTTTAATGAACAATGAAG+TGG | 0.601083 | tig0019745:-99186 | None:intergenic |
ATGGCAGACTACCTGTGATA+GGG | 0.603092 | tig0019745:+102175 | Msa1375800:CDS |
AGTGAGAGGAGCTGGTCACT+TGG | 0.603748 | tig0019745:+102734 | Msa1375800:CDS |
GTACTGTTTGAATGACATGC+TGG | 0.606307 | tig0019745:-101156 | None:intergenic |
ATTGATACACCAGCAAATGA+GGG | 0.607673 | tig0019745:-102924 | None:intergenic |
AAGTCCCTGGATTTAAACTG+TGG | 0.613586 | tig0019745:-100210 | None:intergenic |
ATAAGAGAGAGAGCCTCAGT+TGG | 0.632043 | tig0019745:-102771 | None:intergenic |
GAAGATTACTATGACAACAA+AGG | 0.634842 | tig0019745:+100967 | Msa1375800:CDS |
CTGTCAATGAAGATCATGGG+AGG | 0.639911 | tig0019745:+99306 | Msa1375800:CDS |
AAAATGATTATAGAATGAAG+AGG | 0.640286 | tig0019745:+101409 | Msa1375800:CDS |
ATTAATAGTGGAGATGCAGA+TGG | 0.641384 | tig0019745:+102156 | Msa1375800:intron |
GCCTCTCAACAAACCAACTG+AGG | 0.642126 | tig0019745:+102758 | Msa1375800:CDS |
ATCTACACCAAACTCATCAA+AGG | 0.646779 | tig0019745:+101715 | Msa1375800:CDS |
TCTGCATATGTGGAATAACA+AGG | 0.650025 | tig0019745:-101456 | None:intergenic |
TGTCAATGAAGATCATGGGA+GGG | 0.660889 | tig0019745:+99307 | Msa1375800:CDS |
TACACCAAACTCATCAAAGG+TGG | 0.666201 | tig0019745:+101718 | Msa1375800:CDS |
ATTATTTGTTACTGTCACTG+AGG | 0.669384 | tig0019745:-101181 | None:intergenic |
ATTATGCTACTCACACACAC+CGG | 0.674418 | tig0019745:+103036 | Msa1375800:three_prime_UTR |
TCCTACGTATTTACTCGCAG+TGG | 0.675072 | tig0019745:+94381 | Msa1375800:CDS |
AGGGACACGATATTGTGTTG+AGG | 0.690396 | tig0019745:+102194 | Msa1375800:CDS |
GATAGAATAAGTGATCTACC+AGG | 0.720379 | tig0019745:+99239 | Msa1375800:CDS |
GCCACTGCGAGTAAATACGT+AGG | 0.799510 | tig0019745:-94382 | None:intergenic |
CRISPR-GE
badsite warning | sgRNA_sequence | Strand | Position | Region | GC_content |
---|---|---|---|---|---|
!!! | TTAATAATTAATTTTTTTAA+AGG | + | tig0019745:102522-102541 | Msa1375800:intron | 0.0% |
!!! | AAGACAAAATATTATATTTT+AGG | + | tig0019745:96185-96204 | Msa1375800:intron | 10.0% |
!!! | AATTCGATTTTTTAAATTTT+TGG | - | tig0019745:96662-96681 | None:intergenic | 10.0% |
!!! | TTTTCGATTTTTAAATTTTT+TGG | - | tig0019745:96755-96774 | None:intergenic | 10.0% |
!!! | AAAAAGATTTTAAAAAATTC+TGG | + | tig0019745:96832-96851 | Msa1375800:intron | 10.0% |
!!! | GATTTTTTTTTTCAAAAAAT+CGG | - | tig0019745:96887-96906 | None:intergenic | 10.0% |
!!! | CACAATTTTAATAAAATATT+GGG | + | tig0019745:96975-96994 | Msa1375800:intron | 10.0% |
!! | TTAAAAAATTAGAGAAAAAT+CGG | - | tig0019745:97364-97383 | None:intergenic | 10.0% |
!!! | TTTTTCTGTTTTTTAATTTT+TGG | + | tig0019745:97469-97488 | Msa1375800:intron | 10.0% |
!!! | TGAATATTTTTATGATTTTT+TGG | + | tig0019745:97563-97582 | Msa1375800:intron | 10.0% |
!! | TGATACAAAAATAAATATTA+CGG | - | tig0019745:97837-97856 | None:intergenic | 10.0% |
!!! | TAGTTTGTAATTAAATATTA+CGG | - | tig0019745:100136-100155 | None:intergenic | 10.0% |
!! | AAAAAATAAAAATCATTTAG+GGG | - | tig0019745:100926-100945 | None:intergenic | 10.0% |
!! | GAAAAAATAAAAATCATTTA+GGG | - | tig0019745:100927-100946 | None:intergenic | 10.0% |
!! | TGAAAAAATAAAAATCATTT+AGG | - | tig0019745:100928-100947 | None:intergenic | 10.0% |
!!! | TAAATGATTTTTATTTTTTC+AGG | + | tig0019745:100927-100946 | Msa1375800:intron | 10.0% |
!!! | TTAAATTCTAAAATTAATAG+AGG | + | tig0019745:102006-102025 | Msa1375800:intron | 10.0% |
!! | TTAATTAAGAATTTATACAA+TGG | - | tig0019745:102294-102313 | None:intergenic | 10.0% |
!! | AAATAATCGAATAATTAAGA+CGG | + | tig0019745:95377-95396 | Msa1375800:intron | 15.0% |
!! | TCTATTCTAATCTTAAAAAT+TGG | - | tig0019745:96134-96153 | None:intergenic | 15.0% |
!! | TTTAAAAATAAAATCTGATG+TGG | - | tig0019745:96589-96608 | None:intergenic | 15.0% |
!!! | CCAATATTTTATTAAAATTG+TGG | - | tig0019745:96977-96996 | None:intergenic | 15.0% |
!!! | CCACAATTTTAATAAAATAT+TGG | + | tig0019745:96974-96993 | Msa1375800:intron | 15.0% |
!! | TTATTCTCAAATAATATCAT+AGG | + | tig0019745:97079-97098 | Msa1375800:intron | 15.0% |
!! | TATTCTCAAATAATATCATA+GGG | + | tig0019745:97080-97099 | Msa1375800:intron | 15.0% |
!! | AAAAAAAATGTCATAAATTC+TGG | - | tig0019745:97273-97292 | None:intergenic | 15.0% |
!!! | TTTAAAATTAAAATCTGATG+TGG | + | tig0019745:97620-97639 | Msa1375800:intron | 15.0% |
!!! | TTCTTTTAAGAATAAGATTT+AGG | + | tig0019745:98760-98779 | Msa1375800:intron | 15.0% |
!!! | ATGAATTGTTTTTGTAAATA+TGG | - | tig0019745:98870-98889 | None:intergenic | 15.0% |
!!! | ACTAAAACATGATTATTTTT+TGG | - | tig0019745:98916-98935 | None:intergenic | 15.0% |
!! | TTAAAACAAAGAAACATATT+AGG | - | tig0019745:99160-99179 | None:intergenic | 15.0% |
!! | TTATTATTAGTAAATGTTAG+TGG | + | tig0019745:99440-99459 | Msa1375800:intron | 15.0% |
!! | TAAAAATAAGTATTAAGTCT+CGG | - | tig0019745:99573-99592 | None:intergenic | 15.0% |
!!! | AACATATAGTTTTTTATGTA+TGG | + | tig0019745:99594-99613 | Msa1375800:intron | 15.0% |
!! | ATACTTCATAGTAAAAAATT+GGG | - | tig0019745:99820-99839 | None:intergenic | 15.0% |
!! | TATACTTCATAGTAAAAAAT+TGG | - | tig0019745:99821-99840 | None:intergenic | 15.0% |
!!! | AAAACCTTTAAGATTAATAA+AGG | - | tig0019745:100564-100583 | None:intergenic | 15.0% |
!!! | TAATTTTCCATTCTTTATTT+TGG | - | tig0019745:100609-100628 | None:intergenic | 15.0% |
!! | AAATAAAGAATGGAAAATTA+AGG | + | tig0019745:100609-100628 | Msa1375800:intron | 15.0% |
!!! | TAGAATAAAGTATCAATTAA+GGG | - | tig0019745:101596-101615 | None:intergenic | 15.0% |
!!! | ATAGAATAAAGTATCAATTA+AGG | - | tig0019745:101597-101616 | None:intergenic | 15.0% |
!!! | ACTATCTTTTTTTTTTTTTG+AGG | + | tig0019745:101883-101902 | Msa1375800:intron | 15.0% |
!!! | CTATCTTTTTTTTTTTTTGA+GGG | + | tig0019745:101884-101903 | Msa1375800:intron | 15.0% |
!! | AACATCTAATTATCATCTTA+TGG | + | tig0019745:94600-94619 | Msa1375800:intron | 20.0% |
!!! | TATTAAGAGTATGATTCTAT+AGG | - | tig0019745:94752-94771 | None:intergenic | 20.0% |
!! | AATAATCGAATAATTAAGAC+GGG | + | tig0019745:95378-95397 | Msa1375800:intron | 20.0% |
!! | TTAGTAGTGTTTATATAGTA+GGG | - | tig0019745:95454-95473 | None:intergenic | 20.0% |
!! | ATTAGTAGTGTTTATATAGT+AGG | - | tig0019745:95455-95474 | None:intergenic | 20.0% |
!!! | TTTTAATTATGGACAAATGT+TGG | - | tig0019745:95590-95609 | None:intergenic | 20.0% |
!!! | ATGTAGTGTACTTTTAATTA+TGG | - | tig0019745:95601-95620 | None:intergenic | 20.0% |
!!! | TTATCGGTTTAGTATATAAA+AGG | - | tig0019745:95710-95729 | None:intergenic | 20.0% |
!!! | TCAAAACAAATATGTTGTTT+CGG | - | tig0019745:96036-96055 | None:intergenic | 20.0% |
!! | GATAAATTAATCGTGTTTAA+AGG | + | tig0019745:96088-96107 | Msa1375800:intron | 20.0% |
!!! | ATAATATTTTGTCTTGTGTT+CGG | - | tig0019745:96180-96199 | None:intergenic | 20.0% |
!! | TTTAGGAATCATAAATCTTA+AGG | + | tig0019745:96234-96253 | Msa1375800:intron | 20.0% |
!! | TGTTATAATATGTATCCTTA+GGG | + | tig0019745:96283-96302 | Msa1375800:intron | 20.0% |
!!! | TAAAAGCTGGTTTAATATTT+AGG | + | tig0019745:96372-96391 | Msa1375800:intron | 20.0% |
!!! | AAAAGCTGGTTTAATATTTA+GGG | + | tig0019745:96373-96392 | Msa1375800:intron | 20.0% |
!!! | TGGAAAAAAAAAGTTTTACA+AGG | - | tig0019745:96476-96495 | None:intergenic | 20.0% |
!!! | GATTTGGCATTTTTTTTAAA+TGG | + | tig0019745:96545-96564 | Msa1375800:intron | 20.0% |
!!! | ATTAGGCAAAAAAAATTTTG+TGG | - | tig0019745:97018-97037 | None:intergenic | 20.0% |
!!! | ATTCTAACAAAAATCCATTT+TGG | + | tig0019745:97039-97058 | Msa1375800:intron | 20.0% |
!!! | TTCTAACAAAAATCCATTTT+GGG | + | tig0019745:97040-97059 | Msa1375800:intron | 20.0% |
!!! | GGAAAAAAAAAAGTTTTACA+AGG | + | tig0019745:97734-97753 | Msa1375800:intron | 20.0% |
!!! | AATCAAATCGAAAATTTTAC+AGG | + | tig0019745:97762-97781 | Msa1375800:intron | 20.0% |
!!! | ATCAAATCGAAAATTTTACA+GGG | + | tig0019745:97763-97782 | Msa1375800:intron | 20.0% |
!!! | TAATTTGTTCCTTTTCTTAT+TGG | + | tig0019745:98064-98083 | Msa1375800:intron | 20.0% |
!!! | GGTTAGTGTATTTTTTTTAA+CGG | + | tig0019745:98085-98104 | Msa1375800:intron | 20.0% |
!!! | TTTTTTTAACGGTTTCTTAT+TGG | + | tig0019745:98096-98115 | Msa1375800:intron | 20.0% |
!!! | TTTTTATAGACAAATGTTAG+TGG | - | tig0019745:98833-98852 | None:intergenic | 20.0% |
!! | CTAGCTAAAATGAATAAAAT+TGG | - | tig0019745:99104-99123 | None:intergenic | 20.0% |
!!! | TTGAAAAAGTATTATGAAAG+AGG | - | tig0019745:99518-99537 | None:intergenic | 20.0% |
!! | TAAATAAATATGACTAGAGT+TGG | - | tig0019745:99630-99649 | None:intergenic | 20.0% |
!! | AAATAGTTGCAATAAAAATG+TGG | - | tig0019745:100473-100492 | None:intergenic | 20.0% |
!!! | TTTTATTGCAACTATTTTTC+AGG | + | tig0019745:100476-100495 | Msa1375800:intron | 20.0% |
!! | AACACCTTTATTAATCTTAA+AGG | + | tig0019745:100557-100576 | Msa1375800:CDS | 20.0% |
!!! | AGCTTTCTTAAATAGTTTTT+AGG | - | tig0019745:100720-100739 | None:intergenic | 20.0% |
!!! | TGATTTTTATTTTTTCAGGT+AGG | + | tig0019745:100931-100950 | Msa1375800:intron | 20.0% |
!!! | GATTTTTATTTTTTCAGGTA+GGG | + | tig0019745:100932-100951 | Msa1375800:intron | 20.0% |
!!! | ACAATATTTGTTTAAGTTAG+AGG | + | tig0019745:101363-101382 | Msa1375800:intron | 20.0% |
!!! | CAATATTTGTTTAAGTTAGA+GGG | + | tig0019745:101364-101383 | Msa1375800:intron | 20.0% |
!! | AAAATGATTATAGAATGAAG+AGG | + | tig0019745:101409-101428 | Msa1375800:CDS | 20.0% |
!! | TACTCTAAATTAATGTTGTT+AGG | + | tig0019745:101780-101799 | Msa1375800:intron | 20.0% |
!! | TATATATCTATTCAGTCTTA+AGG | - | tig0019745:101810-101829 | None:intergenic | 20.0% |
!! | GTAAAAATACACAATCTATA+TGG | - | tig0019745:101865-101884 | None:intergenic | 20.0% |
!!! | TTAAGGATCCATTTAATTTA+TGG | + | tig0019745:101934-101953 | Msa1375800:intron | 20.0% |
!! | AAAATGCATTTATGACTTTA+TGG | + | tig0019745:101973-101992 | Msa1375800:intron | 20.0% |
!! | TAATTTCAACTAAGACTTAA+TGG | + | tig0019745:102555-102574 | Msa1375800:intron | 20.0% |
!! | TGTGACTTAATTTAATAGAT+TGG | - | tig0019745:102883-102902 | None:intergenic | 20.0% |
!! | AATCTATTAAATTAAGTCAC+AGG | + | tig0019745:102882-102901 | Msa1375800:three_prime_UTR | 20.0% |
!! | GTGTATCAATATAATCAAAA+AGG | + | tig0019745:102937-102956 | Msa1375800:three_prime_UTR | 20.0% |
!! | AGTGAAAAGTTGGAATTTTT+AGG | - | tig0019745:94554-94573 | None:intergenic | 25.0% |
! | GATAATTAGATGTTGAATTG+AGG | - | tig0019745:94594-94613 | None:intergenic | 25.0% |
! | ATCAATTTAACATCTGTTCA+TGG | + | tig0019745:94652-94671 | Msa1375800:intron | 25.0% |
! | TAAATAGACAGACATAAGTT+AGG | - | tig0019745:94890-94909 | None:intergenic | 25.0% |
! | TGATTTATAACTGCATAATG+TGG | - | tig0019745:95060-95079 | None:intergenic | 25.0% |
! | TGATTTATAACTGCATAATG+TGG | - | tig0019745:95060-95079 | None:intergenic | 25.0% |
! | TAGTAGTGTTTATATAGTAG+GGG | - | tig0019745:95453-95472 | None:intergenic | 25.0% |
!! | TACTAAACCGATAATTGTTT+TGG | + | tig0019745:95716-95735 | Msa1375800:intron | 25.0% |
!!! | GTATTTTGGAACAAAAGATT+AGG | - | tig0019745:95838-95857 | None:intergenic | 25.0% |
! | TTTGTTCCAAAATACATGTT+TGG | + | tig0019745:95843-95862 | Msa1375800:intron | 25.0% |
! | TCTTAAAAATTGGTGTATGT+AGG | - | tig0019745:96124-96143 | None:intergenic | 25.0% |
!! | TAATATTTTGTCTTGTGTTC+GGG | - | tig0019745:96179-96198 | None:intergenic | 25.0% |
! | GTGTTATAATATGTATCCTT+AGG | + | tig0019745:96282-96301 | Msa1375800:intron | 25.0% |
!! | ATTCTTTTCTTCATAAAAGC+TGG | + | tig0019745:96359-96378 | Msa1375800:intron | 25.0% |
! | GAAAATAACCTATATTACAG+GGG | - | tig0019745:96415-96434 | None:intergenic | 25.0% |
! | CGAAAATAACCTATATTACA+GGG | - | tig0019745:96416-96435 | None:intergenic | 25.0% |
!!! | CCTGTAATATAGGTTATTTT+CGG | + | tig0019745:96414-96433 | Msa1375800:intron | 25.0% |
!! | AATCAAACCGAAAATTTTAC+CGG | - | tig0019745:96448-96467 | None:intergenic | 25.0% |
!! | GGATTTTTGTTAGAATCATT+AGG | - | tig0019745:97035-97054 | None:intergenic | 25.0% |
!! | TCTAACAAAAATCCATTTTG+GGG | + | tig0019745:97041-97060 | Msa1375800:intron | 25.0% |
! | AATCTGGATACAAATTTAGA+GGG | - | tig0019745:97210-97229 | None:intergenic | 25.0% |
! | AAATCTGGATACAAATTTAG+AGG | - | tig0019745:97211-97230 | None:intergenic | 25.0% |
!! | TCAAATCGAAAATTTTACAG+GGG | + | tig0019745:97764-97783 | Msa1375800:intron | 25.0% |
!! | AATATAAAAACGGACTTACT+TGG | + | tig0019745:97954-97973 | Msa1375800:intron | 25.0% |
! | AAGAAAAGGAACAAATTACA+AGG | - | tig0019745:98062-98081 | None:intergenic | 25.0% |
! | ATACACTAACCAATAAGAAA+AGG | - | tig0019745:98076-98095 | None:intergenic | 25.0% |
!! | AAGGACAAAATTTTCTATCA+TGG | - | tig0019745:98168-98187 | None:intergenic | 25.0% |
!! | ATAGAAAATTTTGTCCTTTG+TGG | + | tig0019745:98170-98189 | Msa1375800:intron | 25.0% |
! | ACAAATGAATAATTCCAAAG+AGG | + | tig0019745:98212-98231 | Msa1375800:intron | 25.0% |
! | CAATGAACATTTGAATTTGT+TGG | - | tig0019745:98456-98475 | None:intergenic | 25.0% |
! | ATCTCCAATATTCTCAAAAT+TGG | + | tig0019745:98578-98597 | Msa1375800:intron | 25.0% |
!!! | GTGATTTTTAAGAAACATCA+AGG | + | tig0019745:98724-98743 | Msa1375800:intron | 25.0% |
!!! | ATTTTTAAGAAACATCAAGG+AGG | + | tig0019745:98727-98746 | Msa1375800:intron | 25.0% |
!!! | AAACACTTTTTGTGATCTTT+GGG | - | tig0019745:98952-98971 | None:intergenic | 25.0% |
!!! | AAAACACTTTTTGTGATCTT+TGG | - | tig0019745:98953-98972 | None:intergenic | 25.0% |
!! | AAAGCATCTGAAATAAATGT+TGG | + | tig0019745:99203-99222 | Msa1375800:CDS | 25.0% |
! | TTCAAAGAACCAATAGAAAA+GGG | - | tig0019745:99333-99352 | None:intergenic | 25.0% |
!! | ATTCTTTTTGCAGCATTTAT+TGG | - | tig0019745:99908-99927 | None:intergenic | 25.0% |
!!! | AGAAGCAAATTTGTTATTTG+TGG | + | tig0019745:99970-99989 | Msa1375800:intron | 25.0% |
!!! | ATTTTAGAGGATCATTTTGT+AGG | + | tig0019745:100046-100065 | Msa1375800:CDS | 25.0% |
! | TCCTTAACCAAAATAAAGAA+TGG | + | tig0019745:100599-100618 | Msa1375800:intron | 25.0% |
!!! | TCCATTCTTTATTTTGGTTA+AGG | - | tig0019745:100603-100622 | None:intergenic | 25.0% |
! | ATGGAAAATTAAGGAGATTA+AGG | + | tig0019745:100618-100637 | Msa1375800:intron | 25.0% |
! | GTGTTATAAAAAAGTGATTC+TGG | - | tig0019745:100881-100900 | None:intergenic | 25.0% |
!! | GTGATTTTAAACAATCTCAA+TGG | + | tig0019745:101058-101077 | Msa1375800:CDS | 25.0% |
! | TATCAATTTCTGAGTAATCA+TGG | - | tig0019745:101119-101138 | None:intergenic | 25.0% |
!! | TTTAAGTTAGAGGGAAAATT+TGG | + | tig0019745:101373-101392 | Msa1375800:intron | 25.0% |
! | AAGAAAACAATAACATAGCA+TGG | + | tig0019745:101532-101551 | Msa1375800:CDS | 25.0% |
! | ACTGAAAAATTAGACATAGA+TGG | - | tig0019745:101647-101666 | None:intergenic | 25.0% |
! | AATACACAATCTATATGGTT+AGG | - | tig0019745:101860-101879 | None:intergenic | 25.0% |
! | CTATCTCATCTTTATAGTTA+AGG | + | tig0019745:101917-101936 | Msa1375800:intron | 25.0% |
! | ATAGAATTGTTAGTAGCTTT+CGG | + | tig0019745:102040-102059 | Msa1375800:intron | 25.0% |
! | ATCAAAAATTGAATCACATG+AGG | - | tig0019745:102080-102099 | None:intergenic | 25.0% |
! | ATGGCAAAAAAGATAAATAG+AGG | - | tig0019745:102275-102294 | None:intergenic | 25.0% |
!!! | AGAAAATTTTGAGTTTACAG+CGG | - | tig0019745:102634-102653 | None:intergenic | 25.0% |
!! | TAAGACTTAATGGATATGAA+TGG | + | tig0019745:102660-102679 | Msa1375800:intron | 25.0% |
! | AAACAAACATGTAGATTTCA+TGG | - | tig0019745:103003-103022 | None:intergenic | 25.0% |
!!! | AGTTGGAATTTTTAGGTTTC+TGG | - | tig0019745:94547-94566 | None:intergenic | 30.0% |
TAGGAGATTAAGTGAAAAGT+TGG | - | tig0019745:94564-94583 | None:intergenic | 30.0% | |
GTTGAATTGAGGTTAGAATT+AGG | - | tig0019745:94583-94602 | None:intergenic | 30.0% | |
TTTGGTGAGAATTGAGAATT+AGG | - | tig0019745:94703-94722 | None:intergenic | 30.0% | |
ATTCTGCTATTATCAGGTAA+GGG | - | tig0019745:94794-94813 | None:intergenic | 30.0% | |
! | AAAAGTAGTACGTACGTTTT+TGG | - | tig0019745:94867-94886 | None:intergenic | 30.0% |
TAGTAGTGAGAAGAGTAAAA+AGG | - | tig0019745:94918-94937 | None:intergenic | 30.0% | |
!! | TAATGTGGAGTATTTTGTTG+TGG | - | tig0019745:95045-95064 | None:intergenic | 30.0% |
TATGATTCATGAAGTTGAGT+GGG | - | tig0019745:95275-95294 | None:intergenic | 30.0% | |
TTATGATTCATGAAGTTGAG+TGG | - | tig0019745:95276-95295 | None:intergenic | 30.0% | |
TAATTATGTACCCCTATTAG+AGG | + | tig0019745:95423-95442 | Msa1375800:intron | 30.0% | |
GTTGTGTGAATTGAAAAAAG+TGG | - | tig0019745:95505-95524 | None:intergenic | 30.0% | |
TAAACACAAATTCCCATGTT+GGG | - | tig0019745:95538-95557 | None:intergenic | 30.0% | |
TTAAACACAAATTCCCATGT+TGG | - | tig0019745:95539-95558 | None:intergenic | 30.0% | |
!!! | AAACCGATAATTGTTTTGGA+AGG | + | tig0019745:95720-95739 | Msa1375800:intron | 30.0% |
!!! | AACCGATAATTGTTTTGGAA+GGG | + | tig0019745:95721-95740 | Msa1375800:intron | 30.0% |
TCCAAAATACATGTTTGGAT+TGG | + | tig0019745:95848-95867 | Msa1375800:intron | 30.0% | |
! | ACCAATCCAAACATGTATTT+TGG | - | tig0019745:95852-95871 | None:intergenic | 30.0% |
! | AAAATACATGTTTGGATTGG+TGG | + | tig0019745:95851-95870 | Msa1375800:intron | 30.0% |
! | CAAAGCAATTCTGAACTTTT+AGG | + | tig0019745:96217-96236 | Msa1375800:intron | 30.0% |
CTAGTTTATCTCAAAGTTGA+TGG | - | tig0019745:96338-96357 | None:intergenic | 30.0% | |
CCGAAAATAACCTATATTAC+AGG | - | tig0019745:96417-96436 | None:intergenic | 30.0% | |
! | ATCAAACCGAAAATTTTACC+GGG | - | tig0019745:96447-96466 | None:intergenic | 30.0% |
!!! | TGTGGAATTTTTTTTACACC+TGG | - | tig0019745:96571-96590 | None:intergenic | 30.0% |
ATCTTATTATAGCCCCAAAA+TGG | - | tig0019745:97056-97075 | None:intergenic | 30.0% | |
! | GAGCTTAATTCTAGGAAAAA+TGG | + | tig0019745:97162-97181 | Msa1375800:intron | 30.0% |
CCTATAATATAGGTCATTTC+CGG | - | tig0019745:97796-97815 | None:intergenic | 30.0% | |
CGGAAATGACCTATATTATA+GGG | + | tig0019745:97794-97813 | Msa1375800:intron | 30.0% | |
GGAAATGACCTATATTATAG+GGG | + | tig0019745:97795-97814 | Msa1375800:intron | 30.0% | |
! | GTTTTTCACCCCTATAATAT+AGG | - | tig0019745:97806-97825 | None:intergenic | 30.0% |
TTACAAGGTGACATAAAAGT+TGG | - | tig0019745:98047-98066 | None:intergenic | 30.0% | |
!! | TTCTATCATGGTGTCATTAT+TGG | - | tig0019745:98156-98175 | None:intergenic | 30.0% |
!! | TAAGGTTTTTGTGTGTTGAT+TGG | + | tig0019745:98418-98437 | Msa1375800:intron | 30.0% |
!!! | AAGGTTTTTGTGTGTTGATT+GGG | + | tig0019745:98419-98438 | Msa1375800:intron | 30.0% |
!! | ACATTTGAATTTGTTGGAGT+GGG | - | tig0019745:98450-98469 | None:intergenic | 30.0% |
!! | AACATTTGAATTTGTTGGAG+TGG | - | tig0019745:98451-98470 | None:intergenic | 30.0% |
CAATATTCTCAAAATTGGTC+CGG | + | tig0019745:98583-98602 | Msa1375800:intron | 30.0% | |
!!! | GTTTTTTTTCTGTGTCTAGA+TGG | - | tig0019745:98667-98686 | None:intergenic | 30.0% |
ATGTGTTTCTTAATCGAAGT+TGG | + | tig0019745:98688-98707 | Msa1375800:intron | 30.0% | |
!! | ATCGAAGTTGGTAAATTTGA+AGG | + | tig0019745:98700-98719 | Msa1375800:intron | 30.0% |
!! | TCGAAGTTGGTAAATTTGAA+GGG | + | tig0019745:98701-98720 | Msa1375800:intron | 30.0% |
GAAAGAAAAATTGTTAGCTG+TGG | - | tig0019745:98795-98814 | None:intergenic | 30.0% | |
! | AGTAGTCAATGCTTTTACAT+TGG | + | tig0019745:99055-99074 | Msa1375800:intron | 30.0% |
!!! | AATGCTTTTACATTGGCTTT+GGG | + | tig0019745:99062-99081 | Msa1375800:intron | 30.0% |
CAAAGAAACATATTAGGAAC+TGG | - | tig0019745:99154-99173 | None:intergenic | 30.0% | |
TGCTTTAATGAACAATGAAG+TGG | - | tig0019745:99189-99208 | None:intergenic | 30.0% | |
! | TAACCTGAAAAGTGTGAAAT+TGG | - | tig0019745:99281-99300 | None:intergenic | 30.0% |
CTTCAAAGAACCAATAGAAA+AGG | - | tig0019745:99334-99353 | None:intergenic | 30.0% | |
!! | ATGTTAGTGGTTAATTTGCT+AGG | + | tig0019745:99453-99472 | Msa1375800:intron | 30.0% |
!! | TGTTAGTGGTTAATTTGCTA+GGG | + | tig0019745:99454-99473 | Msa1375800:intron | 30.0% |
GTATGAATTTATTCGCAACA+TGG | + | tig0019745:99479-99498 | Msa1375800:intron | 30.0% | |
AGTATTATGAAAGAGGTTCA+AGG | - | tig0019745:99511-99530 | None:intergenic | 30.0% | |
ATAAGTATTAAGTCTCGGAA+AGG | - | tig0019745:99568-99587 | None:intergenic | 30.0% | |
TGTAATGTTGCCTTTGAATT+AGG | + | tig0019745:99673-99692 | Msa1375800:intron | 30.0% | |
TTTATTGGCACAGCAATAAT+TGG | - | tig0019745:99893-99912 | None:intergenic | 30.0% | |
TAAGAAAAACCAACTCCAAT+GGG | - | tig0019745:100001-100020 | None:intergenic | 30.0% | |
TAAAATAGTGAGATCAGAAG+AGG | - | tig0019745:100032-100051 | None:intergenic | 30.0% | |
!! | TTCTGATCTCACTATTTTAG+AGG | + | tig0019745:100033-100052 | Msa1375800:CDS | 30.0% |
ATTTCCACAGTTTAAATCCA+GGG | + | tig0019745:100206-100225 | Msa1375800:CDS | 30.0% | |
!! | CAAAATAGCTTCTGCTATTT+TGG | + | tig0019745:100818-100837 | Msa1375800:intron | 30.0% |
TCATAGTAATCTTCAGTTTC+TGG | - | tig0019745:100961-100980 | None:intergenic | 30.0% | |
GAAGATTACTATGACAACAA+AGG | + | tig0019745:100967-100986 | Msa1375800:CDS | 30.0% | |
! | ATTATTTGTTACTGTCACTG+AGG | - | tig0019745:101184-101203 | None:intergenic | 30.0% |
! | ATGAAGAGGATGAGAATTTT+TGG | + | tig0019745:101423-101442 | Msa1375800:CDS | 30.0% |
! | TGAAGAGGATGAGAATTTTT+GGG | + | tig0019745:101424-101443 | Msa1375800:CDS | 30.0% |
GAAAAATTCTTCTGCATATG+TGG | - | tig0019745:101469-101488 | None:intergenic | 30.0% | |
!! | ATGCAGAAGAATTTTTCAAC+AGG | + | tig0019745:101472-101491 | Msa1375800:CDS | 30.0% |
!! | TGCAGAAGAATTTTTCAACA+GGG | + | tig0019745:101473-101492 | Msa1375800:CDS | 30.0% |
AAACAATAACATAGCATGGA+AGG | + | tig0019745:101536-101555 | Msa1375800:CDS | 30.0% | |
! | TTTTCAGTGATTCCATATTG+AGG | + | tig0019745:101659-101678 | Msa1375800:intron | 30.0% |
ACCTGTAAATCCATATCTTA+AGG | - | tig0019745:101744-101763 | None:intergenic | 30.0% | |
CACTTGGTCCATAAATTAAA+TGG | - | tig0019745:101945-101964 | None:intergenic | 30.0% | |
CACTATTAATTCATTCCACA+AGG | - | tig0019745:102146-102165 | None:intergenic | 30.0% | |
CTTGTGGAATGAATTAATAG+TGG | + | tig0019745:102144-102163 | Msa1375800:intron | 30.0% | |
ATCTTGGTACCATAATAATC+AGG | + | tig0019745:102248-102267 | Msa1375800:CDS | 30.0% | |
AATAGAGGACCTGATTATTA+TGG | - | tig0019745:102260-102279 | None:intergenic | 30.0% | |
GAGAATGAGGAAAATTATAG+TGG | + | tig0019745:102402-102421 | Msa1375800:intron | 30.0% | |
TCATATCCATTAAGTCTTAG+AGG | - | tig0019745:102659-102678 | None:intergenic | 30.0% | |
CTTATTCATTCTTTCCTAAC+TGG | + | tig0019745:102789-102808 | Msa1375800:CDS | 30.0% | |
GAATTCATTCATGATGATCA+TGG | - | tig0019745:102837-102856 | None:intergenic | 30.0% | |
! | AGCATGATCAGGTTAAGTTT+TGG | - | tig0019745:94721-94740 | None:intergenic | 35.0% |
AGGATGAATTTAGCATGATC+AGG | - | tig0019745:94732-94751 | None:intergenic | 35.0% | |
GATTCTGCTATTATCAGGTA+AGG | - | tig0019745:94795-94814 | None:intergenic | 35.0% | |
!! | CGTACGTTTTTGGAGAAAAA+GGG | - | tig0019745:94857-94876 | None:intergenic | 35.0% |
!! | ACGTACGTTTTTGGAGAAAA+AGG | - | tig0019745:94858-94877 | None:intergenic | 35.0% |
!! | TTGTGTGGAGTATTTTGTTG+TGG | - | tig0019745:95215-95234 | None:intergenic | 35.0% |
!! | ATGTGGAGTATTTTGTTGTG+TGG | - | tig0019745:95043-95062 | None:intergenic | 35.0% |
!! | AACATTAGTTCTACCCAACA+TGG | + | tig0019745:95522-95541 | Msa1375800:intron | 35.0% |
!! | ACATTAGTTCTACCCAACAT+GGG | + | tig0019745:95523-95542 | Msa1375800:intron | 35.0% |
CTCCCTTCCAAAACAATTAT+CGG | - | tig0019745:95726-95745 | None:intergenic | 35.0% | |
!!! | GATAATTGTTTTGGAAGGGA+GGG | + | tig0019745:95725-95744 | Msa1375800:intron | 35.0% |
AACCAGATACATAGACTTTG+AGG | + | tig0019745:95812-95831 | Msa1375800:intron | 35.0% | |
!! | ACAAATATGTTGTTTCGGCT+CGG | - | tig0019745:96031-96050 | None:intergenic | 35.0% |
! | TCGGGTCGTCTTAAATATTT+TGG | - | tig0019745:96161-96180 | None:intergenic | 35.0% |
! | GTTTTTCACCCCTGTAATAT+AGG | + | tig0019745:96404-96423 | Msa1375800:intron | 35.0% |
! | TCAAACCGAAAATTTTACCG+GGG | - | tig0019745:96446-96465 | None:intergenic | 35.0% |
!!! | GGCATTTTTTTTAAATGGCC+AGG | + | tig0019745:96550-96569 | Msa1375800:intron | 35.0% |
TATGATTTCTACCTCCTCTA+AGG | + | tig0019745:97137-97156 | Msa1375800:intron | 35.0% | |
AGAATTAAGCTCTTCCTTAG+AGG | - | tig0019745:97154-97173 | None:intergenic | 35.0% | |
CTAAGGAAGAGCTTAATTCT+AGG | + | tig0019745:97154-97173 | Msa1375800:intron | 35.0% | |
CCGGAAATGACCTATATTAT+AGG | + | tig0019745:97793-97812 | Msa1375800:intron | 35.0% | |
!! | ATGGTGTCATTATTGGAGTT+GGG | - | tig0019745:98149-98168 | None:intergenic | 35.0% |
TCTTACTGAATTGTCCACAA+AGG | - | tig0019745:98187-98206 | None:intergenic | 35.0% | |
TAATTCCAAAGAGGTTCAAG+TGG | + | tig0019745:98221-98240 | Msa1375800:intron | 35.0% | |
AAAATCCACTTGAACCTCTT+TGG | - | tig0019745:98229-98248 | None:intergenic | 35.0% | |
ATACCACTAAGCTACACATT+CGG | - | tig0019745:98511-98530 | None:intergenic | 35.0% | |
!! | CGGACCAATTTTGAGAATAT+TGG | - | tig0019745:98585-98604 | None:intergenic | 35.0% |
!! | CGAAGTTGGTAAATTTGAAG+GGG | + | tig0019745:98702-98721 | Msa1375800:intron | 35.0% |
TATAGTGCCAATATGTGAGT+GGG | - | tig0019745:99033-99052 | None:intergenic | 35.0% | |
TTATAGTGCCAATATGTGAG+TGG | - | tig0019745:99034-99053 | None:intergenic | 35.0% | |
!!! | CAATGCTTTTACATTGGCTT+TGG | + | tig0019745:99061-99080 | Msa1375800:intron | 35.0% |
GATAGAATAAGTGATCTACC+AGG | + | tig0019745:99239-99258 | Msa1375800:CDS | 35.0% | |
ATCACTGTCAATGAAGATCA+TGG | + | tig0019745:99302-99321 | Msa1375800:CDS | 35.0% | |
TCACTGTCAATGAAGATCAT+GGG | + | tig0019745:99303-99322 | Msa1375800:CDS | 35.0% | |
!! | GTTAGTGGTTAATTTGCTAG+GGG | + | tig0019745:99455-99474 | Msa1375800:intron | 35.0% |
AACTTCTCAATCTATGCCAA+TGG | + | tig0019745:99536-99555 | Msa1375800:intron | 35.0% | |
!!! | CCATTTTGGTTGACTAAAAG+AGG | - | tig0019745:99745-99764 | None:intergenic | 35.0% |
! | CCTCTTTTAGTCAACCAAAA+TGG | + | tig0019745:99742-99761 | Msa1375800:CDS | 35.0% |
TTAGTCAACCAAAATGGTGA+AGG | + | tig0019745:99748-99767 | Msa1375800:CDS | 35.0% | |
! | ATGTTAGTCCTTCACCATTT+TGG | - | tig0019745:99759-99778 | None:intergenic | 35.0% |
TAACATTCAACCCATACTCT+TGG | + | tig0019745:99773-99792 | Msa1375800:CDS | 35.0% | |
! | AACCTTGATTCCAAGAGTAT+GGG | - | tig0019745:99786-99805 | None:intergenic | 35.0% |
AAACCTTGATTCCAAGAGTA+TGG | - | tig0019745:99787-99806 | None:intergenic | 35.0% | |
GTAAGAAAAACCAACTCCAA+TGG | - | tig0019745:100002-100021 | None:intergenic | 35.0% | |
CCAATTCACCAAGAAATTGT+AGG | - | tig0019745:100178-100197 | None:intergenic | 35.0% | |
CCTACAATTTCTTGGTGAAT+TGG | + | tig0019745:100175-100194 | Msa1375800:CDS | 35.0% | |
GATTTCCACAGTTTAAATCC+AGG | + | tig0019745:100205-100224 | Msa1375800:CDS | 35.0% | |
TAGATACACATTGCACATAC+AGG | - | tig0019745:100339-100358 | None:intergenic | 35.0% | |
! | ATGAAGCACTAAGACATACA+CGG | - | tig0019745:100417-100436 | None:intergenic | 35.0% |
! | CATTTAGGGGTGCATATTTA+GGG | - | tig0019745:100913-100932 | None:intergenic | 35.0% |
! | TCATTTAGGGGTGCATATTT+AGG | - | tig0019745:100914-100933 | None:intergenic | 35.0% |
! | GTTTTGCTTTCTCATATTGC+TGG | - | tig0019745:101032-101051 | None:intergenic | 35.0% |
CTACCTTGGAAAATGATTCA+GGG | - | tig0019745:101209-101228 | None:intergenic | 35.0% | |
TCTACCTTGGAAAATGATTC+AGG | - | tig0019745:101210-101229 | None:intergenic | 35.0% | |
GTGACATTAGTTATCTACCT+TGG | - | tig0019745:101223-101242 | None:intergenic | 35.0% | |
AGGGAAAATTTGGTTATTGC+AGG | + | tig0019745:101383-101402 | Msa1375800:intron | 35.0% | |
! | GAAGAGGATGAGAATTTTTG+GGG | + | tig0019745:101425-101444 | Msa1375800:CDS | 35.0% |
!! | AAGAGGATGAGAATTTTTGG+GGG | + | tig0019745:101426-101445 | Msa1375800:CDS | 35.0% |
TCTGCATATGTGGAATAACA+AGG | - | tig0019745:101459-101478 | None:intergenic | 35.0% | |
GAAGTTGTAAGTCCTCAATA+TGG | - | tig0019745:101674-101693 | None:intergenic | 35.0% | |
!! | TTGATGAGTTTGGTGTAGAT+GGG | - | tig0019745:101715-101734 | None:intergenic | 35.0% |
!! | TTTGATGAGTTTGGTGTAGA+TGG | - | tig0019745:101716-101735 | None:intergenic | 35.0% |
ATCTACACCAAACTCATCAA+AGG | + | tig0019745:101715-101734 | Msa1375800:CDS | 35.0% | |
GCCTTAAGATATGGATTTAC+AGG | + | tig0019745:101740-101759 | Msa1375800:CDS | 35.0% | |
! | TGCATTTTTCACTTTGCACT+TGG | - | tig0019745:101961-101980 | None:intergenic | 35.0% |
GTATGTTTGTTTGTACCTTG+TGG | + | tig0019745:102128-102147 | Msa1375800:intron | 35.0% | |
! | ATTAATAGTGGAGATGCAGA+TGG | + | tig0019745:102156-102175 | Msa1375800:intron | 35.0% |
TAAAGTCTACTTGGAGATCT+TGG | + | tig0019745:102232-102251 | Msa1375800:CDS | 35.0% | |
!!! | CGCATTTTGATTAGAGAATG+AGG | + | tig0019745:102389-102408 | Msa1375800:intron | 35.0% |
GAGTTACTTGATTGAGTTTG+TGG | + | tig0019745:102434-102453 | Msa1375800:intron | 35.0% | |
!! | TTCTCTCCTCTAAGACTTAA+TGG | + | tig0019745:102650-102669 | Msa1375800:intron | 35.0% |
AATGGATATGAATGGAATGC+AGG | + | tig0019745:102668-102687 | Msa1375800:intron | 35.0% | |
ATGATCATGGACGTATAGTA+GGG | - | tig0019745:102824-102843 | None:intergenic | 35.0% | |
ATAATGTAACCCTCATTTGC+TGG | + | tig0019745:102915-102934 | Msa1375800:three_prime_UTR | 35.0% | |
ATTGATACACCAGCAAATGA+GGG | - | tig0019745:102927-102946 | None:intergenic | 35.0% | |
TATTGATACACCAGCAAATG+AGG | - | tig0019745:102928-102947 | None:intergenic | 35.0% | |
AAGAGAGAAGAACCAAAGGA+GGG | - | tig0019745:94822-94841 | None:intergenic | 40.0% | |
AAAGAGAGAAGAACCAAAGG+AGG | - | tig0019745:94823-94842 | None:intergenic | 40.0% | |
CAGAAAGAGAGAAGAACCAA+AGG | - | tig0019745:94826-94845 | None:intergenic | 40.0% | |
ATATTAAAGATTGGGCTGCG+TGG | - | tig0019745:94954-94973 | None:intergenic | 40.0% | |
TAGTAGTGAGGAAGTTGAGT+GGG | - | tig0019745:95088-95107 | None:intergenic | 40.0% | |
TTAGTAGTGAGGAAGTTGAG+TGG | - | tig0019745:95089-95108 | None:intergenic | 40.0% | |
GAGATGAGCAATTAGTAGTG+AGG | - | tig0019745:94930-94949 | None:intergenic | 40.0% | |
ATATTAAAGATTGGGCTGCG+TGG | - | tig0019745:94954-94973 | None:intergenic | 40.0% | |
AAAAAGTGGAAGTCCCACAT+CGG | - | tig0019745:95491-95510 | None:intergenic | 40.0% | |
GACAAATGTTGGAACATGTG+TGG | - | tig0019745:95579-95598 | None:intergenic | 40.0% | |
!!! | CGATAATTGTTTTGGAAGGG+AGG | + | tig0019745:95724-95743 | Msa1375800:intron | 40.0% |
TATCTGGTTGCACTTGCTTA+GGG | - | tig0019745:95801-95820 | None:intergenic | 40.0% | |
! | TTTTAGTGCAACCCTTGCAA+AGG | + | tig0019745:95986-96005 | Msa1375800:intron | 40.0% |
TTTAGTGCAACCCTTGCAAA+GGG | + | tig0019745:95987-96006 | Msa1375800:intron | 40.0% | |
! | CTTTTACCATCCCTTTGCAA+GGG | - | tig0019745:96000-96019 | None:intergenic | 40.0% |
! | TCTTTTACCATCCCTTTGCA+AGG | - | tig0019745:96001-96020 | None:intergenic | 40.0% |
! | TTTCGCCCCGGTAAAATTTT+CGG | + | tig0019745:96438-96457 | Msa1375800:intron | 40.0% |
ATTAAGCTCTTCCTTAGAGG+AGG | - | tig0019745:97151-97170 | None:intergenic | 40.0% | |
!! | AGAGGGTTTTGTAAAAGTCG+TGG | - | tig0019745:97193-97212 | None:intergenic | 40.0% |
! | AATTTTACAGGGGCGAAAAC+CGG | + | tig0019745:97774-97793 | Msa1375800:intron | 40.0% |
!! | CATGGTGTCATTATTGGAGT+TGG | - | tig0019745:98150-98169 | None:intergenic | 40.0% |
GATTACCTCAATCCAATGAG+TGG | + | tig0019745:98277-98296 | Msa1375800:intron | 40.0% | |
! | ATTAGGCCACACAACTTGTT+TGG | - | tig0019745:98394-98413 | None:intergenic | 40.0% |
AAACAAGTTGTGTGGCCTAA+TGG | + | tig0019745:98393-98412 | Msa1375800:intron | 40.0% | |
AACAAGTTGTGTGGCCTAAT+GGG | + | tig0019745:98394-98413 | Msa1375800:intron | 40.0% | |
CACAAAAACCTTAGCCCATT+AGG | - | tig0019745:98411-98430 | None:intergenic | 40.0% | |
AAGCTACACATTCGGAGAAT+GGG | - | tig0019745:98503-98522 | None:intergenic | 40.0% | |
TAAGCTACACATTCGGAGAA+TGG | - | tig0019745:98504-98523 | None:intergenic | 40.0% | |
! | GGTATGAGTTGAGATGTTGA+AGG | + | tig0019745:98526-98545 | Msa1375800:intron | 40.0% |
!!! | ATGTTTTTTCTCGCCTGCAT+GGG | - | tig0019745:98619-98638 | None:intergenic | 40.0% |
!!! | AATGTTTTTTCTCGCCTGCA+TGG | - | tig0019745:98620-98639 | None:intergenic | 40.0% |
CATGTCTGAAAATGACAGTG+AGG | - | tig0019745:98991-99010 | None:intergenic | 40.0% | |
! | CCTGAAAAGTGTGAAATTGG+TGG | - | tig0019745:99278-99297 | None:intergenic | 40.0% |
! | CCACCAATTTCACACTTTTC+AGG | + | tig0019745:99275-99294 | Msa1375800:CDS | 40.0% |
TGTCAATGAAGATCATGGGA+GGG | + | tig0019745:99307-99326 | Msa1375800:CDS | 40.0% | |
AGAAGGAGAGGTTTATTGGA+GGG | - | tig0019745:99368-99387 | None:intergenic | 40.0% | |
AACAGCACCATATCCAATTG+AGG | - | tig0019745:99710-99729 | None:intergenic | 40.0% | |
!! | TATGGTGCTGTTGTTGAGAT+AGG | + | tig0019745:99718-99737 | Msa1375800:CDS | 40.0% |
AACCCATACTCTTGGAATCA+AGG | + | tig0019745:99781-99800 | Msa1375800:CDS | 40.0% | |
TTATTTGTGGAGTCACCCAT+TGG | + | tig0019745:99983-100002 | Msa1375800:CDS | 40.0% | |
! | AGTGAGATCAGAAGAGGTAT+TGG | - | tig0019745:100026-100045 | None:intergenic | 40.0% |
CAAACTACTTGAATCAGCTG+AGG | + | tig0019745:100149-100168 | Msa1375800:intron | 40.0% | |
TGAGGATGCCTACAATTTCT+TGG | + | tig0019745:100167-100186 | Msa1375800:CDS | 40.0% | |
AAGTCCCTGGATTTAAACTG+TGG | - | tig0019745:100213-100232 | None:intergenic | 40.0% | |
!! | AGCACCGATACTTCAAATTG+AGG | + | tig0019745:100308-100327 | Msa1375800:intron | 40.0% |
! | CACGCCTCAATTTGAAGTAT+CGG | - | tig0019745:100315-100334 | None:intergenic | 40.0% |
AGATTAACTCTGCAAGCTGA+GGG | - | tig0019745:100511-100530 | None:intergenic | 40.0% | |
AAGATTAACTCTGCAAGCTG+AGG | - | tig0019745:100512-100531 | None:intergenic | 40.0% | |
!! | AAGGCCTTCTAGAATATGCA+TGG | + | tig0019745:100986-101005 | Msa1375800:CDS | 40.0% |
GACTCCATGCATATTCTAGA+AGG | - | tig0019745:100993-101012 | None:intergenic | 40.0% | |
ATGGTCTAATGAGTGCAATC+AGG | + | tig0019745:101077-101096 | Msa1375800:CDS | 40.0% | |
GTACTGTTTGAATGACATGC+TGG | - | tig0019745:101159-101178 | None:intergenic | 40.0% | |
! | TGTCCCTGAATCATTTTCCA+AGG | + | tig0019745:101203-101222 | Msa1375800:CDS | 40.0% |
TACACCAAACTCATCAAAGG+TGG | + | tig0019745:101718-101737 | Msa1375800:CDS | 40.0% | |
! | TCAAAGGTGGCCTTAAGATA+TGG | + | tig0019745:101731-101750 | Msa1375800:CDS | 40.0% |
TGTTAGTAGCTTTCGGTGAA+AGG | + | tig0019745:102047-102066 | Msa1375800:intron | 40.0% | |
GTTAGTAGCTTTCGGTGAAA+GGG | + | tig0019745:102048-102067 | Msa1375800:intron | 40.0% | |
! | CGATATTGTGTTGAGGCATT+AGG | + | tig0019745:102201-102220 | Msa1375800:CDS | 40.0% |
!! | GACTACCTCTAAAGTCTACT+TGG | + | tig0019745:102223-102242 | Msa1375800:CDS | 40.0% |
GATCTCCAAGTAGACTTTAG+AGG | - | tig0019745:102231-102250 | None:intergenic | 40.0% | |
GATATGAATGGAATGCAGGT+TGG | + | tig0019745:102672-102691 | Msa1375800:intron | 40.0% | |
TTGACATATGTGACAGTGAG+AGG | + | tig0019745:102720-102739 | Msa1375800:CDS | 40.0% | |
GATGATCATGGACGTATAGT+AGG | - | tig0019745:102825-102844 | None:intergenic | 40.0% | |
TCCTACGTATTTACTCGCAG+TGG | + | tig0019745:94381-94400 | Msa1375800:CDS | 45.0% | |
GCTGCGATTCTGCTATTATC+AGG | - | tig0019745:94800-94819 | None:intergenic | 45.0% | |
! | TAGGGGTGTACCTCTAATAG+GGG | - | tig0019745:95436-95455 | None:intergenic | 45.0% |
! | GTAGGGGTGTACCTCTAATA+GGG | - | tig0019745:95437-95456 | None:intergenic | 45.0% |
! | AGTAGGGGTGTACCTCTAAT+AGG | - | tig0019745:95438-95457 | None:intergenic | 45.0% |
AAAACCCGTACAATACGAGC+AGG | + | tig0019745:95770-95789 | Msa1375800:intron | 45.0% | |
AAACCCGTACAATACGAGCA+GGG | + | tig0019745:95771-95790 | Msa1375800:intron | 45.0% | |
GTATCTGGTTGCACTTGCTT+AGG | - | tig0019745:95802-95821 | None:intergenic | 45.0% | |
GGCCTCAAAGTCTATGTATC+TGG | - | tig0019745:95817-95836 | None:intergenic | 45.0% | |
!! | TCATGTTAACTTGCGCCCTA+AGG | - | tig0019745:96301-96320 | None:intergenic | 45.0% |
!! | GTTATTTTCGGTTTTCGCCC+CGG | + | tig0019745:96426-96445 | Msa1375800:intron | 45.0% |
!! | AGCGAATTTGCTGAGTTGGA+CGG | - | tig0019745:97695-97714 | None:intergenic | 45.0% |
!! | CGTAAGCGAATTTGCTGAGT+TGG | - | tig0019745:97691-97710 | None:intergenic | 45.0% |
ACTCAGCAAATTCGCTTACG+TGG | + | tig0019745:96518-96537 | Msa1375800:intron | 45.0% | |
!! | ATAGGGTTTTGTCATCGTCG+TGG | + | tig0019745:97097-97116 | Msa1375800:intron | 45.0% |
ACTCAGCAAATTCGCTTACG+TGG | - | tig0019745:96518-96537 | None:intergenic | 45.0% | |
!! | CGTAAGCGAATTTGCTGAGT+TGG | + | tig0019745:97691-97710 | Msa1375800:intron | 45.0% |
!! | AGCGAATTTGCTGAGTTGGA+CGG | + | tig0019745:97695-97714 | Msa1375800:intron | 45.0% |
TTCTGCCACTCATTGGATTG+AGG | - | tig0019745:98285-98304 | None:intergenic | 45.0% | |
TCAATCCAATGAGTGGCAGA+AGG | + | tig0019745:98284-98303 | Msa1375800:intron | 45.0% | |
TTAGTCCTTCTGCCACTCAT+TGG | - | tig0019745:98292-98311 | None:intergenic | 45.0% | |
ATAGTGACCACTACCCTAGA+TGG | - | tig0019745:98366-98385 | None:intergenic | 45.0% | |
! | TAGGGTAGTGGTCACTATTG+TGG | + | tig0019745:98368-98387 | Msa1375800:intron | 45.0% |
TTGTGGCCAAACAAGTTGTG+TGG | + | tig0019745:98385-98404 | Msa1375800:intron | 45.0% | |
AGCTACACATTCGGAGAATG+GGG | - | tig0019745:98502-98521 | None:intergenic | 45.0% | |
TCTCCGAATGTGTAGCTTAG+TGG | + | tig0019745:98505-98524 | Msa1375800:intron | 45.0% | |
GCAATCACCCACTCACATAT+TGG | + | tig0019745:99023-99042 | Msa1375800:intron | 45.0% | |
!! | TGTGAAATTGGTGGTGTCGA+AGG | - | tig0019745:99269-99288 | None:intergenic | 45.0% |
CTGTCAATGAAGATCATGGG+AGG | + | tig0019745:99306-99325 | Msa1375800:CDS | 45.0% | |
GAGAAGGAGAGGTTTATTGG+AGG | - | tig0019745:99369-99388 | None:intergenic | 45.0% | |
CCAGAGAAGGAGAGGTTTAT+TGG | - | tig0019745:99372-99391 | None:intergenic | 45.0% | |
CCAATAAACCTCTCCTTCTC+TGG | + | tig0019745:99369-99388 | Msa1375800:CDS | 45.0% | |
! | CTCGGAAAGGTATAGTCCAT+TGG | - | tig0019745:99555-99574 | None:intergenic | 45.0% |
GTTGCCTTTGAATTAGGACC+TGG | + | tig0019745:99679-99698 | Msa1375800:intron | 45.0% | |
GCATCCAGGTCCTAATTCAA+AGG | - | tig0019745:99686-99705 | None:intergenic | 45.0% | |
!! | TATCCAATTGAGGAGCATCC+AGG | - | tig0019745:99700-99719 | None:intergenic | 45.0% |
GGATGCTCCTCAATTGGATA+TGG | + | tig0019745:99700-99719 | Msa1375800:CDS | 45.0% | |
!!! | TCCAGGGACTTTTTCATAGC+AGG | + | tig0019745:100222-100241 | Msa1375800:CDS | 45.0% |
TCCTGCTATGAAAAAGTCCC+TGG | - | tig0019745:100226-100245 | None:intergenic | 45.0% | |
ATAGCAGGAGAAAGCTATGC+TGG | + | tig0019745:100237-100256 | Msa1375800:CDS | 45.0% | |
AAGGCCACCTTTGATGAGTT+TGG | - | tig0019745:101725-101744 | None:intergenic | 45.0% | |
ATGGCAGACTACCTGTGATA+GGG | + | tig0019745:102175-102194 | Msa1375800:CDS | 45.0% | |
CAATATCGTGTCCCTATCAC+AGG | - | tig0019745:102189-102208 | None:intergenic | 45.0% | |
AGGGACACGATATTGTGTTG+AGG | + | tig0019745:102194-102213 | Msa1375800:CDS | 45.0% | |
! | ATGAATGGAATGCAGGTTGG+AGG | + | tig0019745:102675-102694 | Msa1375800:intron | 45.0% |
!! | GGAAGGATAGTGGAGTATGA+AGG | + | tig0019745:102696-102715 | Msa1375800:CDS | 45.0% |
ATAAGAGAGAGAGCCTCAGT+TGG | - | tig0019745:102774-102793 | None:intergenic | 45.0% | |
TAGGGAGATGATCTCCAGTT+AGG | - | tig0019745:102806-102825 | None:intergenic | 45.0% | |
!! | AAATAAAAATATTAAAGATT+GGG | - | tig0019745:94962-94981 | None:intergenic | 5.0% |
!! | AAAATAAAAATATTAAAGAT+TGG | - | tig0019745:94963-94982 | None:intergenic | 5.0% |
!! | AAATAAAAATATTAAAGATT+GGG | - | tig0019745:94962-94981 | None:intergenic | 5.0% |
!! | AAAATAAAAATATTAAAGAT+TGG | - | tig0019745:94963-94982 | None:intergenic | 5.0% |
!!! | AAATTTAATTTTTAAAAATC+TGG | - | tig0019745:97226-97245 | None:intergenic | 5.0% |
!!! | TTTTCTATTTTTTAAATTTT+TGG | + | tig0019745:97532-97551 | Msa1375800:intron | 5.0% |
!! | TTATTTACTTAATATAAAAA+CGG | + | tig0019745:97944-97963 | Msa1375800:intron | 5.0% |
GCGAGCAAAGTGTGCATTCT+GGG | + | tig0019745:94357-94376 | Msa1375800:CDS | 50.0% | |
GCCACTGCGAGTAAATACGT+AGG | - | tig0019745:94385-94404 | None:intergenic | 50.0% | |
GCGAGCGATGAATGTCAGTA+CGG | + | tig0019745:94521-94540 | Msa1375800:intron | 50.0% | |
TGTGTGTGTTCCATCCGATG+TGG | + | tig0019745:95474-95493 | Msa1375800:intron | 50.0% | |
GTGTGTGTTCCATCCGATGT+GGG | + | tig0019745:95475-95494 | Msa1375800:intron | 50.0% | |
CAACCCTGCTCGTATTGTAC+GGG | - | tig0019745:95777-95796 | None:intergenic | 50.0% | |
CCAACCCTGCTCGTATTGTA+CGG | - | tig0019745:95778-95797 | None:intergenic | 50.0% | |
!! | GAATTTGCTGAGTTGGACGG+GGG | - | tig0019745:97698-97717 | None:intergenic | 50.0% |
!! | CGAATTTGCTGAGTTGGACG+GGG | - | tig0019745:97697-97716 | None:intergenic | 50.0% |
!! | GCGAATTTGCTGAGTTGGAC+GGG | - | tig0019745:97696-97715 | None:intergenic | 50.0% |
!! | GCGAATTTGCTGAGTTGGAC+GGG | + | tig0019745:97696-97715 | Msa1375800:intron | 50.0% |
!! | CGAATTTGCTGAGTTGGACG+GGG | + | tig0019745:97697-97716 | Msa1375800:intron | 50.0% |
!! | GAATTTGCTGAGTTGGACGG+GGG | + | tig0019745:97698-97717 | Msa1375800:intron | 50.0% |
CTAGTGCACTGCACCATCTA+GGG | + | tig0019745:98350-98369 | Msa1375800:intron | 50.0% | |
!! | TTGTGTGGCCTAATGGGCTA+AGG | + | tig0019745:98400-98419 | Msa1375800:intron | 50.0% |
ACACATTCGGAGAATGGGGT+GGG | - | tig0019745:98498-98517 | None:intergenic | 50.0% | |
TACACATTCGGAGAATGGGG+TGG | - | tig0019745:98499-98518 | None:intergenic | 50.0% | |
GTGAGTGGGTGATTGCACTT+GGG | - | tig0019745:99019-99038 | None:intergenic | 50.0% | |
TGTGAGTGGGTGATTGCACT+TGG | - | tig0019745:99020-99039 | None:intergenic | 50.0% | |
! | ATGGGAGGGCCCTTTTCTAT+TGG | + | tig0019745:99321-99340 | Msa1375800:CDS | 50.0% |
CTGCAAGCTGAGGGATATAG+TGG | - | tig0019745:100502-100521 | None:intergenic | 50.0% | |
!! | TGAGTTTGGTGTAGATGGGC+AGG | - | tig0019745:101711-101730 | None:intergenic | 50.0% |
GATGGCAGACTACCTGTGAT+AGG | + | tig0019745:102174-102193 | Msa1375800:CDS | 50.0% | |
! | ATGGAATGCAGGTTGGAGGA+AGG | + | tig0019745:102679-102698 | Msa1375800:intron | 50.0% |
TATGTGACAGTGAGAGGAGC+TGG | + | tig0019745:102726-102745 | Msa1375800:CDS | 50.0% | |
GCCTCTCAACAAACCAACTG+AGG | + | tig0019745:102758-102777 | Msa1375800:CDS | 50.0% | |
!! | GCCTCAGTTGGTTTGTTGAG+AGG | - | tig0019745:102762-102781 | None:intergenic | 50.0% |
GGCGAGCAAAGTGTGCATTC+TGG | + | tig0019745:94356-94375 | Msa1375800:CDS | 55.0% | |
TTGCTCGCAGTTGCGAGTTC+TGG | + | tig0019745:94460-94479 | Msa1375800:CDS | 55.0% | |
TGCTCGCAGTTGCGAGTTCT+GGG | + | tig0019745:94461-94480 | Msa1375800:CDS | 55.0% | |
TTGCGAGTGTTCTTGCTCGC+AGG | + | tig0019745:94497-94516 | Msa1375800:CDS | 55.0% | |
AGTGGAAGTCCCACATCGGA+TGG | - | tig0019745:95487-95506 | None:intergenic | 55.0% | |
CCGTACAATACGAGCAGGGT+TGG | + | tig0019745:95775-95794 | Msa1375800:intron | 55.0% | |
GTGCAACCCTTGCAAAGGGA+TGG | + | tig0019745:95991-96010 | Msa1375800:intron | 55.0% | |
!! | TCGCTTACGTGGCGCTGATT+TGG | + | tig0019745:96529-96548 | Msa1375800:intron | 55.0% |
GCTAGTGCACTGCACCATCT+AGG | + | tig0019745:98349-98368 | Msa1375800:intron | 55.0% | |
! | CACTGCACCATCTAGGGTAG+TGG | + | tig0019745:98356-98375 | Msa1375800:intron | 55.0% |
CTGCATGGGCAAATTCGGAC+CGG | - | tig0019745:98605-98624 | None:intergenic | 55.0% | |
CTCGCCTGCATGGGCAAATT+CGG | - | tig0019745:98610-98629 | None:intergenic | 55.0% | |
CCATTGAGCCAGAGAAGGAG+AGG | - | tig0019745:99380-99399 | None:intergenic | 55.0% | |
! | CCTCTCCTTCTCTGGCTCAA+TGG | + | tig0019745:99377-99396 | Msa1375800:CDS | 55.0% |
! | CTCCTTCTCTGGCTCAATGG+AGG | + | tig0019745:99380-99399 | Msa1375800:CDS | 55.0% |
CACCTCCATTGAGCCAGAGA+AGG | - | tig0019745:99385-99404 | None:intergenic | 55.0% | |
GGACCTGGATGCTCCTCAAT+TGG | + | tig0019745:99694-99713 | Msa1375800:intron | 55.0% | |
GTGGAGTCACCCATTGGAGT+TGG | + | tig0019745:99989-100008 | Msa1375800:CDS | 55.0% | |
! | GCAGGTTGGAGGAAGGATAG+TGG | + | tig0019745:102686-102705 | Msa1375800:intron | 55.0% |
AGTGAGAGGAGCTGGTCACT+TGG | + | tig0019745:102734-102753 | Msa1375800:CDS | 55.0% | |
GCAGAATCGCAGCCCTCCTT+TGG | + | tig0019745:94807-94826 | Msa1375800:intron | 60.0% | |
! | TTGCTGAGTTGGACGGGGGA+GGG | - | tig0019745:97702-97721 | None:intergenic | 60.0% |
! | TTTGCTGAGTTGGACGGGGG+AGG | - | tig0019745:97701-97720 | None:intergenic | 60.0% |
! | TTTGCTGAGTTGGACGGGGG+AGG | + | tig0019745:97701-97720 | Msa1375800:intron | 60.0% |
! | TTGCTGAGTTGGACGGGGGA+GGG | + | tig0019745:97702-97721 | Msa1375800:intron | 60.0% |
CGGTCCGAATTTGCCCATGC+AGG | + | tig0019745:98603-98622 | Msa1375800:intron | 60.0% | |
! | GGTGGTGTCGAAGGTTGTCC+TGG | - | tig0019745:99260-99279 | None:intergenic | 60.0% |
GTGAGCTCGCAACTGCGAGC+AGG | - | tig0019745:94415-94434 | None:intergenic | 65.0% | |
GCTCGCAGTTGCGAGCTCAC+AGG | + | tig0019745:94415-94434 | Msa1375800:CDS | 65.0% | |
!!! | GACGGGGGAGGGGTGTTTTC+TGG | - | tig0019745:97713-97732 | None:intergenic | 65.0% |
! | TGCTGAGTTGGACGGGGGAG+GGG | - | tig0019745:97703-97722 | None:intergenic | 65.0% |
! | TGCTGAGTTGGACGGGGGAG+GGG | + | tig0019745:97703-97722 | Msa1375800:intron | 65.0% |
!!! | GACGGGGGAGGGGTGTTTTC+TGG | + | tig0019745:97713-97732 | Msa1375800:intron | 65.0% |
Chromosome | Type | Strat | End | Strand | Name |
---|---|---|---|---|---|
tig0019745 | gene | 94354 | 103056 | 94354 | ID=Msa1375800;Name=Msa1375800 |
tig0019745 | mRNA | 94354 | 103056 | 94354 | ID=Msa1375800-mRNA-1;Parent=Msa1375800;Name=Msa1375800-mRNA-1;_AED=0.25;_eAED=0.25;_QI=0|0.9|0.81|0.90|1|1|11|217|528 |
tig0019745 | exon | 94354 | 94518 | 94354 | ID=Msa1375800-mRNA-1:exon:4719;Parent=Msa1375800-mRNA-1 |
tig0019745 | exon | 99155 | 99401 | 99155 | ID=Msa1375800-mRNA-1:exon:4720;Parent=Msa1375800-mRNA-1 |
tig0019745 | exon | 99695 | 99802 | 99695 | ID=Msa1375800-mRNA-1:exon:4721;Parent=Msa1375800-mRNA-1 |
tig0019745 | exon | 99972 | 100067 | 99972 | ID=Msa1375800-mRNA-1:exon:4722;Parent=Msa1375800-mRNA-1 |
tig0019745 | exon | 100166 | 100258 | 100166 | ID=Msa1375800-mRNA-1:exon:4723;Parent=Msa1375800-mRNA-1 |
tig0019745 | exon | 100498 | 100586 | 100498 | ID=Msa1375800-mRNA-1:exon:4724;Parent=Msa1375800-mRNA-1 |
tig0019745 | exon | 100949 | 101224 | 100949 | ID=Msa1375800-mRNA-1:exon:4725;Parent=Msa1375800-mRNA-1 |
tig0019745 | exon | 101405 | 101565 | 101405 | ID=Msa1375800-mRNA-1:exon:4726;Parent=Msa1375800-mRNA-1 |
tig0019745 | exon | 101666 | 101761 | 101666 | ID=Msa1375800-mRNA-1:exon:4727;Parent=Msa1375800-mRNA-1 |
tig0019745 | exon | 102164 | 102269 | 102164 | ID=Msa1375800-mRNA-1:exon:4728;Parent=Msa1375800-mRNA-1 |
tig0019745 | exon | 102690 | 103056 | 102690 | ID=Msa1375800-mRNA-1:exon:4729;Parent=Msa1375800-mRNA-1 |
tig0019745 | CDS | 94354 | 94518 | 94354 | ID=Msa1375800-mRNA-1:cds;Parent=Msa1375800-mRNA-1 |
tig0019745 | CDS | 99155 | 99401 | 99155 | ID=Msa1375800-mRNA-1:cds;Parent=Msa1375800-mRNA-1 |
tig0019745 | CDS | 99695 | 99802 | 99695 | ID=Msa1375800-mRNA-1:cds;Parent=Msa1375800-mRNA-1 |
tig0019745 | CDS | 99972 | 100067 | 99972 | ID=Msa1375800-mRNA-1:cds;Parent=Msa1375800-mRNA-1 |
tig0019745 | CDS | 100166 | 100258 | 100166 | ID=Msa1375800-mRNA-1:cds;Parent=Msa1375800-mRNA-1 |
tig0019745 | CDS | 100498 | 100586 | 100498 | ID=Msa1375800-mRNA-1:cds;Parent=Msa1375800-mRNA-1 |
tig0019745 | CDS | 100949 | 101224 | 100949 | ID=Msa1375800-mRNA-1:cds;Parent=Msa1375800-mRNA-1 |
tig0019745 | CDS | 101405 | 101565 | 101405 | ID=Msa1375800-mRNA-1:cds;Parent=Msa1375800-mRNA-1 |
tig0019745 | CDS | 101666 | 101761 | 101666 | ID=Msa1375800-mRNA-1:cds;Parent=Msa1375800-mRNA-1 |
tig0019745 | CDS | 102164 | 102269 | 102164 | ID=Msa1375800-mRNA-1:cds;Parent=Msa1375800-mRNA-1 |
tig0019745 | CDS | 102690 | 102839 | 102690 | ID=Msa1375800-mRNA-1:cds;Parent=Msa1375800-mRNA-1 |
tig0019745 | three_prime_UTR | 102840 | 103056 | 102840 | ID=Msa1375800-mRNA-1:three_prime_utr;Parent=Msa1375800-mRNA-1 |
Gene Sequence |
Protein sequence |