Alfalfa Gene Editing Database
Alfalfa Gene Editing Database
| Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa0839480 | XP_024640453.1 | 94.964 | 417 | 18 | 2 | 1 | 414 | 1 | 417 | 0.0 | 787 |
| Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa0839480 | sp|Q9C9K5|PILS3_ARATH | 50.361 | 415 | 175 | 3 | 3 | 414 | 4 | 390 | 1.29e-154 | 445 |
| Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa0839480 | G7K2M6 | 94.964 | 417 | 18 | 2 | 1 | 414 | 1 | 417 | 0.0 | 787 |
| Gene ID | Type | Classification |
|---|
| Gene ID | Type | Classification |
|---|
Co-expression Network
| Gene1 | Gene2 | correlation coefficient | p_value | FDR |
|---|---|---|---|---|
| Msa0006700 | Msa0839480 | 0.831446 | 1.662149e-55 | -8.615850e-47 |
| Msa0012780 | Msa0839480 | -0.818002 | 2.459554e-52 | -8.615850e-47 |
| Msa0014120 | Msa0839480 | 0.805328 | 1.407846e-49 | -8.615850e-47 |
| Msa0051100 | Msa0839480 | 0.825543 | 4.427622e-54 | -8.615850e-47 |
| Msa0067580 | Msa0839480 | 0.806633 | 7.483804e-50 | -8.615850e-47 |
| Msa0077390 | Msa0839480 | 0.804096 | 2.544997e-49 | -8.615850e-47 |
| Msa0078370 | Msa0839480 | 0.850602 | 1.527536e-60 | -8.615850e-47 |
| Msa0088550 | Msa0839480 | 0.825955 | 3.534825e-54 | -8.615850e-47 |
| Msa0093440 | Msa0839480 | 0.822522 | 2.264463e-53 | -8.615850e-47 |
| Msa0101060 | Msa0839480 | 0.802383 | 5.757627e-49 | -8.615850e-47 |
| Msa0101650 | Msa0839480 | 0.865755 | 4.690695e-65 | -8.615850e-47 |
| Msa0106110 | Msa0839480 | -0.823655 | 1.232377e-53 | -8.615850e-47 |
| Msa0106120 | Msa0839480 | -0.815927 | 7.192943e-52 | -8.615850e-47 |
| Msa0620640 | Msa0839480 | 0.812293 | 4.560902e-51 | -8.615850e-47 |
| Msa0632540 | Msa0839480 | 0.813627 | 2.326429e-51 | -8.615850e-47 |
| Msa0635470 | Msa0839480 | 0.828533 | 8.525740e-55 | -8.615850e-47 |
| Msa0641020 | Msa0839480 | 0.854269 | 1.377120e-61 | -8.615850e-47 |
| Msa0641030 | Msa0839480 | 0.830054 | 3.644326e-55 | -8.615850e-47 |
| Msa0669990 | Msa0839480 | 0.807131 | 5.870189e-50 | -8.615850e-47 |
| Msa0679560 | Msa0839480 | 0.847041 | 1.486396e-59 | -8.615850e-47 |
| Msa0691190 | Msa0839480 | 0.808686 | 2.741285e-50 | -8.615850e-47 |
| Msa0716740 | Msa0839480 | -0.806381 | 8.457504e-50 | -8.615850e-47 |
| Msa0718470 | Msa0839480 | 0.913970 | 3.314965e-84 | -8.615850e-47 |
| Msa0733670 | Msa0839480 | -0.820464 | 6.765309e-53 | -8.615850e-47 |
| Msa0752580 | Msa0839480 | 0.847796 | 9.217969e-60 | -8.615850e-47 |
| Msa0754500 | Msa0839480 | 0.842854 | 2.004867e-58 | -8.615850e-47 |
| Msa0799290 | Msa0839480 | -0.800529 | 1.381149e-48 | -8.615850e-47 |
| Msa0801100 | Msa0839480 | 0.924574 | 5.871926e-90 | -8.615850e-47 |
| Msa0830900 | Msa0839480 | 0.829222 | 5.809757e-55 | -8.615850e-47 |
| Msa0837510 | Msa0839480 | -0.800690 | 1.280466e-48 | -8.615850e-47 |
| Msa0839480 | Msa0883350 | 0.817650 | 2.954564e-52 | -8.615850e-47 |
| Msa0839480 | Msa0883390 | 0.823039 | 1.716256e-53 | -8.615850e-47 |
| Msa0839480 | Msa0883410 | 0.816000 | 6.929674e-52 | -8.615850e-47 |
| Msa0839480 | Msa0883450 | 0.839023 | 2.030068e-57 | -8.615850e-47 |
| Msa0839480 | Msa0883660 | 0.814467 | 1.517726e-51 | -8.615850e-47 |
| Msa0839480 | Msa0883670 | 0.832957 | 7.027966e-56 | -8.615850e-47 |
| Msa0839480 | Msa0885320 | 0.802139 | 6.464858e-49 | -8.615850e-47 |
| Msa0839480 | Msa0902140 | 0.815991 | 6.962193e-52 | -8.615850e-47 |
| Msa0839480 | Msa0919490 | 0.801407 | 9.136593e-49 | -8.615850e-47 |
| Msa0839480 | Msa0951720 | 0.834855 | 2.354720e-56 | -8.615850e-47 |
| Msa0839480 | Msa0957800 | 0.809185 | 2.143800e-50 | -8.615850e-47 |
| Msa0839480 | Msa1008340 | 0.814378 | 1.588796e-51 | -8.615850e-47 |
| Msa0839480 | Msa1049950 | 0.800155 | 1.645345e-48 | -8.615850e-47 |
| Msa0839480 | Msa1052080 | 0.807631 | 4.599632e-50 | -8.615850e-47 |
| Msa0839480 | Msa1081530 | 0.809730 | 1.637640e-50 | -8.615850e-47 |
| Msa0839480 | Msa1085110 | 0.809616 | 1.732699e-50 | -8.615850e-47 |
| Msa0839480 | Msa1089680 | 0.830192 | 3.372109e-55 | -8.615850e-47 |
| Msa0839480 | Msa1135660 | 0.811946 | 5.427304e-51 | -8.615850e-47 |
| Msa0839480 | Msa1139240 | 0.820035 | 8.485809e-53 | -8.615850e-47 |
| Msa0839480 | Msa1195750 | 0.812215 | 4.743686e-51 | -8.615850e-47 |
| Msa0839480 | Msa1232330 | 0.817445 | 3.285913e-52 | -8.615850e-47 |
| Msa0839480 | Msa1272130 | 0.830208 | 3.341570e-55 | -8.615850e-47 |
| Msa0839480 | Msa1275340 | 0.820016 | 8.571453e-53 | -8.615850e-47 |
| Msa0839480 | Msa1279860 | 0.819125 | 1.368629e-52 | -8.615850e-47 |
| Msa0839480 | Msa1309880 | 0.817325 | 3.496085e-52 | -8.615850e-47 |
| Msa0839480 | Msa1311150 | 0.819741 | 9.906002e-53 | -8.615850e-47 |
| Msa0839480 | Msa1311550 | 0.814268 | 1.680210e-51 | -8.615850e-47 |
| Msa0839480 | Msa1317710 | 0.807820 | 4.192506e-50 | -8.615850e-47 |
| Msa0839480 | Msa1328600 | 0.815663 | 8.237879e-52 | -8.615850e-47 |
| Msa0839480 | Msa1352060 | 0.820581 | 6.359865e-53 | -8.615850e-47 |
| Msa0839480 | Msa1357720 | 0.823449 | 1.377228e-53 | -8.615850e-47 |
| Msa0839480 | Msa1375800 | 0.811121 | 8.202311e-51 | -8.615850e-47 |
| Msa0839480 | Msa1405400 | 0.811859 | 5.670839e-51 | -8.615850e-47 |
| Msa0839480 | Msa1405470 | 0.852045 | 5.971045e-61 | -8.615850e-47 |
| Msa0839480 | Msa1445250 | 0.853162 | 2.866507e-61 | -8.615850e-47 |
| Msa0839480 | Msa1457020 | 0.811679 | 6.206685e-51 | -8.615850e-47 |
| Msa0135360 | Msa0839480 | 0.828087 | 1.092601e-54 | -8.615850e-47 |
| Msa0151860 | Msa0839480 | 0.810860 | 9.344377e-51 | -8.615850e-47 |
| Msa0153440 | Msa0839480 | 0.820022 | 8.540850e-53 | -8.615850e-47 |
| Msa0169960 | Msa0839480 | 0.826789 | 2.236535e-54 | -8.615850e-47 |
| Msa0179860 | Msa0839480 | 0.805161 | 1.525603e-49 | -8.615850e-47 |
| Msa0213090 | Msa0839480 | 0.802279 | 6.049387e-49 | -8.615850e-47 |
| Msa0227800 | Msa0839480 | 0.835577 | 1.547621e-56 | -8.615850e-47 |
| Msa0232860 | Msa0839480 | 0.836129 | 1.121009e-56 | -8.615850e-47 |
| Msa0235550 | Msa0839480 | 0.803090 | 4.114961e-49 | -8.615850e-47 |
| Msa0366470 | Msa0839480 | 0.840107 | 1.060870e-57 | -8.615850e-47 |
| Msa0389050 | Msa0839480 | 0.824217 | 9.099526e-54 | -8.615850e-47 |
| Msa0409820 | Msa0839480 | 0.817049 | 4.033554e-52 | -8.615850e-47 |
| Msa0410960 | Msa0839480 | 0.812416 | 4.286459e-51 | -8.615850e-47 |
| Msa0411000 | Msa0839480 | 0.817711 | 2.862334e-52 | -8.615850e-47 |
| Msa0414450 | Msa0839480 | 0.804514 | 2.082715e-49 | -8.615850e-47 |
| Msa0439700 | Msa0839480 | 0.832315 | 1.014015e-55 | -8.615850e-47 |
| Msa0455230 | Msa0839480 | 0.823087 | 1.672957e-53 | -8.615850e-47 |
| Msa0455260 | Msa0839480 | 0.840234 | 9.830838e-58 | -8.615850e-47 |
| Msa0241580 | Msa0839480 | 0.801719 | 7.884675e-49 | -8.615850e-47 |
| Msa0253370 | Msa0839480 | 0.807092 | 5.985073e-50 | -8.615850e-47 |
| Msa0304990 | Msa0839480 | 0.839455 | 1.568134e-57 | -8.615850e-47 |
| Msa0311330 | Msa0839480 | 0.814095 | 1.833901e-51 | -8.615850e-47 |
| Msa0329550 | Msa0839480 | 0.809256 | 2.069987e-50 | -8.615850e-47 |
| Msa0334170 | Msa0839480 | 0.810998 | 8.722865e-51 | -8.615850e-47 |
| Msa0363440 | Msa0839480 | 0.857672 | 1.391099e-62 | -8.615850e-47 |
| Msa0363460 | Msa0839480 | 0.827879 | 1.225550e-54 | -8.615850e-47 |
| Msa0492740 | Msa0839480 | 0.811302 | 7.492683e-51 | -8.615850e-47 |
| Msa0501470 | Msa0839480 | 0.810360 | 1.198323e-50 | -8.615850e-47 |
| Msa0506230 | Msa0839480 | 0.821503 | 3.900107e-53 | -8.615850e-47 |
| Msa0528970 | Msa0839480 | 0.819060 | 1.416371e-52 | -8.615850e-47 |
| Msa0544930 | Msa0839480 | 0.852729 | 3.813134e-61 | -8.615850e-47 |
| Msa0563140 | Msa0839480 | 0.806254 | 8.994515e-50 | -8.615850e-47 |
| Msa0589610 | Msa0839480 | 0.802474 | 5.516083e-49 | -8.615850e-47 |
| Msa0592470 | Msa0839480 | 0.805065 | 1.598294e-49 | -8.615850e-47 |
| Msa0592540 | Msa0839480 | 0.803954 | 2.724100e-49 | -8.615850e-47 |
PPI
| Gene1 | Gene2 | Type |
|---|
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa0839480 | MtrunA17_Chr5g0407621 | 94.964 | 417 | 18 | 2 | 1 | 414 | 1 | 417 | 0.0 | 787 |
| Msa0839480 | MtrunA17_Chr8g0369961 | 65.942 | 414 | 129 | 2 | 1 | 413 | 1 | 403 | 0.0 | 564 |
| Msa0839480 | MtrunA17_Chr8g0335271 | 50.000 | 416 | 198 | 3 | 1 | 413 | 1 | 409 | 1.11e-132 | 387 |
| Msa0839480 | MtrunA17_Chr8g0335261 | 44.811 | 424 | 214 | 6 | 1 | 413 | 1 | 415 | 2.69e-129 | 379 |
| Msa0839480 | MtrunA17_Chr5g0407331 | 42.623 | 427 | 225 | 7 | 1 | 414 | 1 | 420 | 1.69e-124 | 367 |
| Msa0839480 | MtrunA17_Chr5g0407321 | 42.824 | 425 | 227 | 6 | 1 | 414 | 1 | 420 | 1.95e-123 | 364 |
| Msa0839480 | MtrunA17_Chr5g0407271 | 39.243 | 423 | 187 | 8 | 1 | 414 | 1 | 362 | 2.82e-99 | 300 |
| Msa0839480 | MtrunA17_Chr8g0370221 | 38.742 | 302 | 179 | 3 | 116 | 414 | 1 | 299 | 9.12e-74 | 232 |
| Msa0839480 | MtrunA17_Chr5g0407611 | 92.308 | 104 | 8 | 0 | 311 | 414 | 36 | 139 | 3.33e-63 | 199 |
| Msa0839480 | MtrunA17_Chr5g0422801 | 29.358 | 436 | 277 | 7 | 8 | 414 | 18 | 451 | 2.82e-61 | 205 |
| Msa0839480 | MtrunA17_Chr7g0245351 | 29.782 | 413 | 259 | 7 | 8 | 410 | 27 | 418 | 2.33e-58 | 196 |
| Msa0839480 | MtrunA17_Chr1g0208491 | 29.138 | 429 | 264 | 9 | 13 | 405 | 25 | 449 | 4.79e-55 | 188 |
| Msa0839480 | MtrunA17_Chr5g0407281 | 47.853 | 163 | 85 | 0 | 252 | 414 | 12 | 174 | 2.36e-51 | 170 |
| Msa0839480 | MtrunA17_Chr5g0407291 | 46.988 | 166 | 87 | 1 | 1 | 165 | 1 | 166 | 8.15e-51 | 169 |
| Msa0839480 | MtrunA17_Chr8g0370211 | 48.696 | 115 | 58 | 1 | 1 | 114 | 1 | 115 | 1.34e-30 | 114 |
| Msa0839480 | MtrunA17_Chr8g0335431 | 45.783 | 83 | 27 | 1 | 73 | 155 | 8 | 72 | 1.15e-21 | 88.6 |
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa0839480 | AT1G76520.1 | 50.361 | 415 | 175 | 3 | 3 | 414 | 4 | 390 | 1.31e-155 | 445 |
| Msa0839480 | AT1G76520.2 | 50.361 | 415 | 175 | 3 | 3 | 414 | 4 | 390 | 1.31e-155 | 445 |
| Msa0839480 | AT1G20925.1 | 50.725 | 414 | 174 | 2 | 1 | 414 | 89 | 472 | 9.18e-155 | 446 |
| Msa0839480 | AT1G76530.2 | 47.294 | 425 | 203 | 5 | 1 | 414 | 1 | 415 | 3.12e-126 | 371 |
| Msa0839480 | AT1G76530.1 | 47.294 | 425 | 203 | 5 | 1 | 414 | 1 | 415 | 3.12e-126 | 371 |
| Msa0839480 | AT5G65980.1 | 45.368 | 421 | 197 | 4 | 1 | 414 | 1 | 395 | 3.81e-126 | 370 |
| Msa0839480 | AT2G17500.2 | 43.780 | 418 | 207 | 4 | 1 | 413 | 1 | 395 | 5.58e-126 | 370 |
| Msa0839480 | AT2G17500.1 | 43.780 | 418 | 207 | 4 | 1 | 413 | 1 | 395 | 5.58e-126 | 370 |
| Msa0839480 | AT2G17500.3 | 43.780 | 418 | 207 | 4 | 1 | 413 | 1 | 395 | 5.58e-126 | 370 |
| Msa0839480 | AT2G17500.4 | 43.780 | 418 | 207 | 4 | 1 | 413 | 1 | 395 | 5.58e-126 | 370 |
| Msa0839480 | AT5G65980.2 | 44.474 | 380 | 178 | 4 | 1 | 373 | 1 | 354 | 3.16e-107 | 321 |
| Msa0839480 | AT1G76530.3 | 41.367 | 278 | 144 | 5 | 1 | 272 | 1 | 265 | 2.07e-64 | 210 |
| Msa0839480 | AT1G71090.1 | 29.302 | 430 | 270 | 7 | 13 | 412 | 22 | 447 | 8.30e-61 | 204 |
| Msa0839480 | AT5G01990.1 | 29.136 | 405 | 279 | 4 | 8 | 410 | 29 | 427 | 1.64e-58 | 197 |
Find 111 sgRNAs with CRISPR-Local
Find 317 sgRNAs with CRISPR-GE
CRISPR-Local
| sgRNA_sequence | on_target_score | Position | Region |
|---|---|---|---|
| GAAAATATGCCTCTGAAATT+TGG | 0.158249 | 5_4:-14518737 | None:intergenic |
| GGTACCATAGCACAATTATT+TGG | 0.217824 | 5_4:+14521135 | Msa0839480:intron |
| GGAAGAATTAATTGTGATAA+TGG | 0.233166 | 5_4:+14517157 | Msa0839480:exon |
| AGCTTCCTCATATATGTAAA+TGG | 0.235311 | 5_4:+14521388 | Msa0839480:three_prime_UTR |
| TTTGGAGTTCTAATTATTAA+AGG | 0.243214 | 5_4:+14520922 | Msa0839480:CDS |
| GAAGGTTGGCACCCATTATA+AGG | 0.252589 | 5_4:-14519115 | None:intergenic |
| GGCTTATGCTTCACTTTCTA+TGG | 0.255328 | 5_4:+14518031 | Msa0839480:CDS |
| AGGGAGCAAGTACTCCATTT+TGG | 0.255683 | 5_4:+14520854 | Msa0839480:CDS |
| CCTGATGTCTGCTATCAATA+TGG | 0.257377 | 5_4:+14518005 | Msa0839480:CDS |
| CGTCAATTGCGGTGACTCTT+TGG | 0.267495 | 5_4:+14521208 | Msa0839480:CDS |
| TCCAACAATAACCCTTATAA+TGG | 0.267827 | 5_4:+14519103 | Msa0839480:CDS |
| GAAGACTCTGCTTCCATGTT+AGG | 0.267831 | 5_4:+14518990 | Msa0839480:CDS |
| ACTGACAAAGGCATCTTCTA+AGG | 0.273026 | 5_4:-14516938 | None:intergenic |
| ATGGGTGCCAACCTTCTTAA+AGG | 0.277420 | 5_4:+14519122 | Msa0839480:CDS |
| GAGAAGTACAAACTGATATA+AGG | 0.283022 | 5_4:-14520977 | None:intergenic |
| TATTAAAGGTGCAACACATT+TGG | 0.294866 | 5_4:+14520936 | Msa0839480:CDS |
| TGGTCTGATTGGTGGTAATT+TGG | 0.295476 | 5_4:+14517419 | Msa0839480:CDS |
| ATTCCTATAATTGTCCAAAA+TGG | 0.301042 | 5_4:-14520868 | None:intergenic |
| CCCATTACCTTGGAGGCTTC+AGG | 0.307239 | 5_4:+14518428 | Msa0839480:CDS |
| ATTAAAGGTGCAACACATTT+GGG | 0.336833 | 5_4:+14520937 | Msa0839480:CDS |
| CATTAAATAGCACATAGTTT+TGG | 0.343990 | 5_4:+14517136 | Msa0839480:five_prime_UTR |
| AAAGACAAAGGTAGTCCTTT+TGG | 0.344296 | 5_4:+14517978 | Msa0839480:CDS |
| GATGTATGAACAGGAAATTT+AGG | 0.346379 | 5_4:+14517921 | Msa0839480:intron |
| CCTGAAGCCTCCAAGGTAAT+GGG | 0.352521 | 5_4:-14518428 | None:intergenic |
| AAAATATGCCTCTGAAATTT+GGG | 0.358669 | 5_4:-14518736 | None:intergenic |
| ATAGCTGGAATAATGATTAT+AGG | 0.364811 | 5_4:-14517951 | None:intergenic |
| GAAGAATTAATTGTGATAAT+GGG | 0.374940 | 5_4:+14517158 | Msa0839480:exon |
| CTTGATAACATTAATTTGTT+GGG | 0.381662 | 5_4:+14517260 | Msa0839480:CDS |
| CAGATTGTTGGATTTATTGT+TGG | 0.384088 | 5_4:+14518909 | Msa0839480:intron |
| GTATTACTAGTCACTGGAAT+TGG | 0.385060 | 5_4:+14517224 | Msa0839480:CDS |
| AATTTATGAACTTACATGAT+TGG | 0.386393 | 5_4:-14517303 | None:intergenic |
| GCTTCCTCATATATGTAAAT+GGG | 0.394615 | 5_4:+14521389 | Msa0839480:three_prime_UTR |
| CCTTTGTCTTTGCATATAGC+TGG | 0.404968 | 5_4:-14517966 | None:intergenic |
| TGAGTCTCAGCAGAAAATTC+AGG | 0.405411 | 5_4:+14518547 | Msa0839480:CDS |
| ATTATTATTATTCATTGCTA+TGG | 0.413642 | 5_4:+14521263 | Msa0839480:three_prime_UTR |
| TCCTGAAGCCTCCAAGGTAA+TGG | 0.417551 | 5_4:-14518429 | None:intergenic |
| ACTTGATAACATTAATTTGT+TGG | 0.419935 | 5_4:+14517259 | Msa0839480:CDS |
| TCAAGAAATGTTCACAAAGA+AGG | 0.421658 | 5_4:+14518389 | Msa0839480:CDS |
| GAACTAAAGTAGTATAATAT+TGG | 0.424237 | 5_4:+14516912 | Msa0839480:five_prime_UTR |
| CTTCCACCAGCTATGAATAT+AGG | 0.426663 | 5_4:+14521012 | Msa0839480:CDS |
| TTATTGTTGGTGTAGTTCCT+TGG | 0.428012 | 5_4:+14518922 | Msa0839480:CDS |
| GTGTTCAATCCTGGTCTGAT+TGG | 0.430345 | 5_4:+14517408 | Msa0839480:CDS |
| CCCATTATAAGGGTTATTGT+TGG | 0.430983 | 5_4:-14519104 | None:intergenic |
| GTTCATGCCAGTGAACATAT+TGG | 0.431360 | 5_4:+14517578 | Msa0839480:CDS |
| TATTCATTGCTATGGACCTA+TGG | 0.433962 | 5_4:+14521271 | Msa0839480:three_prime_UTR |
| GTACATTATGTGTTCAATCC+TGG | 0.435461 | 5_4:+14517399 | Msa0839480:CDS |
| AGGTGCAACACATTTGGGTT+TGG | 0.444664 | 5_4:+14520942 | Msa0839480:CDS |
| ATAGTAGGTGTCTGTTCTGC+AGG | 0.446697 | 5_4:+14517678 | Msa0839480:CDS |
| AAGACTCTGCTTCCATGTTA+GGG | 0.449266 | 5_4:+14518991 | Msa0839480:CDS |
| ATTCCCCATTTACATATATG+AGG | 0.455224 | 5_4:-14521393 | None:intergenic |
| CCAACAATAACCCTTATAAT+GGG | 0.459789 | 5_4:+14519104 | Msa0839480:CDS |
| AAATTGGGAGCATGATATAT+CGG | 0.460693 | 5_4:-14520900 | None:intergenic |
| AGAAGTACAAACTGATATAA+GGG | 0.464358 | 5_4:-14520976 | None:intergenic |
| TGGTTACGTAGGTTAATGAT+TGG | 0.470577 | 5_4:+14518942 | Msa0839480:CDS |
| TGTTAGGCTCAGCCTTAGGA+TGG | 0.473160 | 5_4:+14517610 | Msa0839480:CDS |
| CATACCGCCCCAAGAGTTGC+TGG | 0.478756 | 5_4:-14518761 | None:intergenic |
| AAGGTTGGCACCCATTATAA+GGG | 0.487760 | 5_4:-14519114 | None:intergenic |
| CCATATTGATAGCAGACATC+AGG | 0.488390 | 5_4:-14518005 | None:intergenic |
| CTGACAAAGGCATCTTCTAA+GGG | 0.490822 | 5_4:-14516937 | None:intergenic |
| AATGTAACCAATATGTTCAC+TGG | 0.491378 | 5_4:-14517585 | None:intergenic |
| GTATTACCTATATTCATAGC+TGG | 0.494163 | 5_4:-14521018 | None:intergenic |
| CACATAGAAGGTCTCATAGT+AGG | 0.498129 | 5_4:+14517663 | Msa0839480:CDS |
| TATAAGGGTTATTGTTGGAA+TGG | 0.499716 | 5_4:-14519099 | None:intergenic |
| ATCAAAGTATTACTAGTCAC+TGG | 0.505619 | 5_4:+14517218 | Msa0839480:CDS |
| GAAAATATAAGTCCAACAAA+AGG | 0.509369 | 5_4:+14518485 | Msa0839480:CDS |
| TAGTGACCCCATTACCTTGG+AGG | 0.517400 | 5_4:+14518421 | Msa0839480:CDS |
| CTGATGTCTGCTATCAATAT+GGG | 0.519197 | 5_4:+14518006 | Msa0839480:CDS |
| TTCAATCCTGGTCTGATTGG+TGG | 0.521156 | 5_4:+14517411 | Msa0839480:CDS |
| GGATGAATGAGCAGGATTGA+AGG | 0.522969 | 5_4:+14520834 | Msa0839480:intron |
| CTGGTGGAAGTGCATATTGA+AGG | 0.528229 | 5_4:-14520999 | None:intergenic |
| ACTAGTAATACTTTGATCAC+AGG | 0.528906 | 5_4:-14517212 | None:intergenic |
| TTTGATAATGATCCATCCTA+AGG | 0.531283 | 5_4:-14517622 | None:intergenic |
| GAGTCTTCAATCACATGAAG+AGG | 0.534955 | 5_4:-14518975 | None:intergenic |
| AAGCCTCCTAGACACATAGA+AGG | 0.535027 | 5_4:+14517651 | Msa0839480:CDS |
| ATAGCACAATTATTTGGAGC+TGG | 0.542960 | 5_4:+14521141 | Msa0839480:CDS |
| ATGAGACCTTCTATGTGTCT+AGG | 0.549972 | 5_4:-14517657 | None:intergenic |
| GATAAAATTAAGCATAAATG+TGG | 0.550997 | 5_4:+14518698 | Msa0839480:CDS |
| AATGTTCAGTTATGATGCTA+TGG | 0.552614 | 5_4:+14521172 | Msa0839480:CDS |
| AATATGTGTGAGTATGCAAC+AGG | 0.553978 | 5_4:+14521694 | Msa0839480:intron |
| TTTGGTCAACCTACTTCATG+TGG | 0.560433 | 5_4:+14521226 | Msa0839480:CDS |
| ATTTGTTGGGAAAAGATGCA+AGG | 0.562343 | 5_4:+14517273 | Msa0839480:CDS |
| AGCTCCAAATAATTGTGCTA+TGG | 0.562424 | 5_4:-14521139 | None:intergenic |
| CAGACATCAGGATCTCCAAA+AGG | 0.564669 | 5_4:-14517993 | None:intergenic |
| TACATCTCCTGAAGCCTCCA+AGG | 0.567379 | 5_4:-14518435 | None:intergenic |
| CTATGCATTGGCGTCAATTG+CGG | 0.577502 | 5_4:+14521197 | Msa0839480:CDS |
| AAATAACGAATAATAACCAT+AGG | 0.579768 | 5_4:-14521287 | None:intergenic |
| GATGAATGAGCAGGATTGAA+GGG | 0.581991 | 5_4:+14520835 | Msa0839480:intron |
| TAGTTGAGTTGAAACTTGAA+AGG | 0.582812 | 5_4:-14521348 | None:intergenic |
| CGCAATTGACGCCAATGCAT+AGG | 0.590257 | 5_4:-14521196 | None:intergenic |
| AGAGACAAGCCACATGAAGT+AGG | 0.597960 | 5_4:-14521235 | None:intergenic |
| TTAGGCAACCCAAATTTCAG+AGG | 0.599786 | 5_4:+14518728 | Msa0839480:CDS |
| TGTATCAGAATCACTCATAG+AGG | 0.602773 | 5_4:+14518454 | Msa0839480:CDS |
| AAGTAGTGACCCCATTACCT+TGG | 0.603131 | 5_4:+14518418 | Msa0839480:CDS |
| TTACCTATATTCATAGCTGG+TGG | 0.606293 | 5_4:-14521015 | None:intergenic |
| CTTCCTCATATATGTAAATG+GGG | 0.606433 | 5_4:+14521390 | Msa0839480:three_prime_UTR |
| ATTATCCGCATATATGCATG+CGG | 0.607494 | 5_4:+14521739 | Msa0839480:three_prime_UTR |
| GTGTAGTTCCTTGGTTACGT+AGG | 0.608969 | 5_4:+14518931 | Msa0839480:CDS |
| CTAGTAATACTTTGATCACA+GGG | 0.614093 | 5_4:-14517211 | None:intergenic |
| TTCACCAGCAACTCTTGGGG+CGG | 0.616074 | 5_4:+14518757 | Msa0839480:CDS |
| CTGAAGCCTCCAAGGTAATG+GGG | 0.618635 | 5_4:-14518427 | None:intergenic |
| TTGAGATGCATACCCTAACA+TGG | 0.620373 | 5_4:-14519003 | None:intergenic |
| AGACCTTCTATGTGTCTAGG+AGG | 0.621742 | 5_4:-14517654 | None:intergenic |
| ATCATTAACCTACGTAACCA+AGG | 0.630812 | 5_4:-14518939 | None:intergenic |
| CTTATGTGTACAACATAATG+CGG | 0.631816 | 5_4:+14518360 | Msa0839480:CDS |
| AAGTCCAACAAAAGGCAATG+TGG | 0.646470 | 5_4:+14518493 | Msa0839480:CDS |
| GATGCTATGGACCTATGCAT+TGG | 0.646844 | 5_4:+14521185 | Msa0839480:CDS |
| CCAGCTATATGCAAAGACAA+AGG | 0.657060 | 5_4:+14517966 | Msa0839480:CDS |
| TGACAAAGGCATCTTCTAAG+GGG | 0.668555 | 5_4:-14516936 | None:intergenic |
| AAATTACCACCAATCAGACC+AGG | 0.672473 | 5_4:-14517417 | None:intergenic |
| TGTCTGCTATCAATATGGGA+TGG | 0.678270 | 5_4:+14518010 | Msa0839480:CDS |
| ATAAGCCGCATGCATATATG+CGG | 0.691279 | 5_4:-14521744 | None:intergenic |
CRISPR-GE
| badsite warning | sgRNA_sequence | Strand | Position | Region | GC_content |
|---|---|---|---|---|---|
| !! | CTAGATATATATTTAAATTT+GGG | - | chr5_4:14519332-14519351 | None:intergenic | 10.0% |
| !! | ACTAGATATATATTTAAATT+TGG | - | chr5_4:14519333-14519352 | None:intergenic | 10.0% |
| !! | ACAATAATATTATATAAAGA+GGG | - | chr5_4:14519361-14519380 | None:intergenic | 10.0% |
| !! | AACAATAATATTATATAAAG+AGG | - | chr5_4:14519362-14519381 | None:intergenic | 10.0% |
| !! | ATATTATAATAATAGTTGTA+TGG | - | chr5_4:14519601-14519620 | None:intergenic | 10.0% |
| !!! | TTTAAAAAAATCAACATTTT+AGG | + | chr5_4:14519731-14519750 | Msa0839480:intron | 10.0% |
| !!! | TTAAAAAAATCAACATTTTA+GGG | + | chr5_4:14519732-14519751 | Msa0839480:intron | 10.0% |
| !!! | TTAAAAGACATTTTAAAATT+TGG | + | chr5_4:14520651-14520670 | Msa0839480:intron | 10.0% |
| !! | AATTTAAATAATAATTTCGT+TGG | + | chr5_4:14520808-14520827 | Msa0839480:intron | 10.0% |
| !!! | TTTGTATAATTTATCATTTT+TGG | + | chr5_4:14521078-14521097 | Msa0839480:intron | 10.0% |
| !!! | TTTATTTTTACTATTTTCAC+TGG | + | chr5_4:14517046-14517065 | Msa0839480:intron | 15.0% |
| !!! | TTATTTTTACTATTTTCACT+GGG | + | chr5_4:14517047-14517066 | Msa0839480:intron | 15.0% |
| !! | TTATATATATGAGAAAAACT+TGG | - | chr5_4:14517088-14517107 | None:intergenic | 15.0% |
| !! | AAATCCTCAAAATAAAAATT+AGG | - | chr5_4:14517509-14517528 | None:intergenic | 15.0% |
| !!! | ACTTTTTGATTTTCATAATT+AGG | + | chr5_4:14517553-14517572 | Msa0839480:intron | 15.0% |
| !!! | TTAATTCTTAAATCACATTT+TGG | + | chr5_4:14518084-14518103 | Msa0839480:intron | 15.0% |
| !! | CAATAATATTATATAAAGAG+GGG | - | chr5_4:14519360-14519379 | None:intergenic | 15.0% |
| !! | TAATGATAGAAATTAATTGA+GGG | - | chr5_4:14519936-14519955 | None:intergenic | 15.0% |
| !! | AAATGTTAGATATATAAGAT+AGG | - | chr5_4:14520092-14520111 | None:intergenic | 15.0% |
| !! | AAATGTTAGATATATAAGAT+AGG | - | chr5_4:14520092-14520111 | None:intergenic | 15.0% |
| !!! | ATAAGACCTAAATTTTTTAT+AGG | + | chr5_4:14520517-14520536 | Msa0839480:intron | 15.0% |
| !! | AATTTGCCTATAAAAAATTT+AGG | - | chr5_4:14520526-14520545 | None:intergenic | 15.0% |
| !!! | TATCATTTTTGGTTATAATA+TGG | + | chr5_4:14521089-14521108 | Msa0839480:intron | 15.0% |
| !! | ATTATTATTATTCATTGCTA+TGG | + | chr5_4:14521263-14521282 | Msa0839480:three_prime_UTR | 15.0% |
| !! | GAACTAAAGTAGTATAATAT+TGG | + | chr5_4:14516912-14516931 | Msa0839480:five_prime_UTR | 20.0% |
| !! | GAAGAATTAATTGTGATAAT+GGG | + | chr5_4:14517158-14517177 | Msa0839480:exon | 20.0% |
| !!! | ACTTGATAACATTAATTTGT+TGG | + | chr5_4:14517259-14517278 | Msa0839480:CDS | 20.0% |
| !!! | CTTGATAACATTAATTTGTT+GGG | + | chr5_4:14517260-14517279 | Msa0839480:CDS | 20.0% |
| !! | AATTTATGAACTTACATGAT+TGG | - | chr5_4:14517306-14517325 | None:intergenic | 20.0% |
| !!! | TTTTGATTTTCATAATTAGG+TGG | + | chr5_4:14517556-14517575 | Msa0839480:intron | 20.0% |
| !!! | ATATTGGTTACATTTTTGTT+AGG | + | chr5_4:14517594-14517613 | Msa0839480:CDS | 20.0% |
| !! | AAGATGCATTAAACAATAAA+CGG | - | chr5_4:14517876-14517895 | None:intergenic | 20.0% |
| !! | GATTTAAGAATTAATGAGAA+AGG | - | chr5_4:14518078-14518097 | None:intergenic | 20.0% |
| !!! | ATTTTTTACTATGTGAATCA+TGG | + | chr5_4:14518155-14518174 | Msa0839480:intron | 20.0% |
| !!! | TTTTTTACTATGTGAATCAT+GGG | + | chr5_4:14518156-14518175 | Msa0839480:intron | 20.0% |
| !! | CTAAGTCTAATATTATGAAA+GGG | - | chr5_4:14518586-14518605 | None:intergenic | 20.0% |
| !! | ACTAAGTCTAATATTATGAA+AGG | - | chr5_4:14518587-14518606 | None:intergenic | 20.0% |
| !! | GATAAAATTAAGCATAAATG+TGG | + | chr5_4:14518698-14518717 | Msa0839480:CDS | 20.0% |
| !! | TTATATCACTATATTTGCAT+TGG | - | chr5_4:14518831-14518850 | None:intergenic | 20.0% |
| !!! | ATCAATCATCTTTATGATTT+TGG | + | chr5_4:14519026-14519045 | Msa0839480:intron | 20.0% |
| !!! | ATTTTGGAATTACTTACATA+AGG | + | chr5_4:14519042-14519061 | Msa0839480:intron | 20.0% |
| !! | GGCGAAAAAATAATAAATTA+TGG | + | chr5_4:14519671-14519690 | Msa0839480:intron | 20.0% |
| !! | CTAATGATAGAAATTAATTG+AGG | - | chr5_4:14519937-14519956 | None:intergenic | 20.0% |
| !! | CAATTAATTTCTATCATTAG+AGG | + | chr5_4:14519937-14519956 | Msa0839480:intron | 20.0% |
| !!! | TTGTTTCTTATACATATAGT+TGG | + | chr5_4:14520755-14520774 | Msa0839480:intron | 20.0% |
| !! | TGTTTCTTATACATATAGTT+GGG | + | chr5_4:14520756-14520775 | Msa0839480:intron | 20.0% |
| !! | TAATTAGAACTCCAAAAATT+GGG | - | chr5_4:14520918-14520937 | None:intergenic | 20.0% |
| !! | ATAATTAGAACTCCAAAAAT+TGG | - | chr5_4:14520919-14520938 | None:intergenic | 20.0% |
| !!! | TTTGGAGTTCTAATTATTAA+AGG | + | chr5_4:14520922-14520941 | Msa0839480:CDS | 20.0% |
| !! | AAATAACGAATAATAACCAT+AGG | - | chr5_4:14521290-14521309 | None:intergenic | 20.0% |
| ! | ATAATGAGTTAAACTGACAA+AGG | - | chr5_4:14516953-14516972 | None:intergenic | 25.0% |
| ! | TTAAACCAAGATAGAATAGA+TGG | + | chr5_4:14517022-14517041 | Msa0839480:intron | 25.0% |
| ! | TAAAACCATCTATTCTATCT+TGG | - | chr5_4:14517030-14517049 | None:intergenic | 25.0% |
| !!! | GAAATTTTTAATTTGTGTGC+AGG | + | chr5_4:14517110-14517129 | Msa0839480:intron | 25.0% |
| !! | CATTAAATAGCACATAGTTT+TGG | + | chr5_4:14517136-14517155 | Msa0839480:five_prime_UTR | 25.0% |
| ! | GGAAGAATTAATTGTGATAA+TGG | + | chr5_4:14517157-14517176 | Msa0839480:exon | 25.0% |
| !!! | TGCTCCTAATTTTTATTTTG+AGG | + | chr5_4:14517502-14517521 | Msa0839480:intron | 25.0% |
| ! | TTTATGATTGATGTATGAAC+AGG | + | chr5_4:14517912-14517931 | Msa0839480:intron | 25.0% |
| ! | ATAGCTGGAATAATGATTAT+AGG | - | chr5_4:14517954-14517973 | None:intergenic | 25.0% |
| ! | TAGTTATGACTAAAGTCAAA+CGG | - | chr5_4:14518202-14518221 | None:intergenic | 25.0% |
| ! | TGAACTTGTACTTATTCTTT+GGG | + | chr5_4:14518305-14518324 | Msa0839480:intron | 25.0% |
| ! | GAAAATATAAGTCCAACAAA+AGG | + | chr5_4:14518485-14518504 | Msa0839480:CDS | 25.0% |
| ! | AGAAAAAAAACCAACAAGAA+AGG | + | chr5_4:14518638-14518657 | Msa0839480:intron | 25.0% |
| ! | AAATATTGATCCTTTCTTGT+TGG | - | chr5_4:14518651-14518670 | None:intergenic | 25.0% |
| !! | CATAAATGTGGAATGATTTT+AGG | + | chr5_4:14518710-14518729 | Msa0839480:CDS | 25.0% |
| !!! | AAAATATGCCTCTGAAATTT+GGG | - | chr5_4:14518739-14518758 | None:intergenic | 25.0% |
| ! | AATATGTTACTCATGAAGAA+AGG | + | chr5_4:14518858-14518877 | Msa0839480:intron | 25.0% |
| !!! | TATCTGTTTTACCTTTAAGA+AGG | - | chr5_4:14519136-14519155 | None:intergenic | 25.0% |
| ! | TTAAAAATACAATACACGTG+TGG | - | chr5_4:14519309-14519328 | None:intergenic | 25.0% |
| ! | TATTTATACCATGCTAGAAA+TGG | + | chr5_4:14519700-14519719 | Msa0839480:intron | 25.0% |
| !!! | ATCCAGAGATTTTAATAAGT+GGG | - | chr5_4:14519829-14519848 | None:intergenic | 25.0% |
| ! | TAAAAGATCAGTAAAATCTC+TGG | + | chr5_4:14519868-14519887 | Msa0839480:intron | 25.0% |
| !!! | TAATGTCTCAAAGTTTTGAA+TGG | - | chr5_4:14520056-14520075 | None:intergenic | 25.0% |
| !!! | ATTCAAAACTTTGAGACATT+AGG | + | chr5_4:14520055-14520074 | Msa0839480:intron | 25.0% |
| !! | TTTTTCATTCCTAATCGATA+TGG | + | chr5_4:14520110-14520129 | Msa0839480:intron | 25.0% |
| !! | TTTTCATTCCTAATCGATAT+GGG | + | chr5_4:14520111-14520130 | Msa0839480:intron | 25.0% |
| !! | GCTAATTTGTCTTTGAATTT+AGG | + | chr5_4:14520423-14520442 | Msa0839480:intron | 25.0% |
| !!! | TTGTTAACTTTTGTTGTTAG+AGG | - | chr5_4:14520621-14520640 | None:intergenic | 25.0% |
| ! | TTGCCAATTCAAATAATTGA+AGG | + | chr5_4:14520683-14520702 | Msa0839480:intron | 25.0% |
| ! | AGTCCTTCAATTATTTGAAT+TGG | - | chr5_4:14520689-14520708 | None:intergenic | 25.0% |
| ! | CTATATGTATAAGAAACAAG+TGG | - | chr5_4:14520754-14520773 | None:intergenic | 25.0% |
| ! | AAATAATAATTTCGTTGGTG+TGG | + | chr5_4:14520813-14520832 | Msa0839480:intron | 25.0% |
| ! | ATTCCTATAATTGTCCAAAA+TGG | - | chr5_4:14520871-14520890 | None:intergenic | 25.0% |
| !! | AGAAGTACAAACTGATATAA+GGG | - | chr5_4:14520979-14520998 | None:intergenic | 25.0% |
| ! | CAAAATTTATTTCCTATGTC+AGG | + | chr5_4:14521114-14521133 | Msa0839480:intron | 25.0% |
| ! | ACTCACACATATTTACATAT+GGG | - | chr5_4:14521687-14521706 | None:intergenic | 25.0% |
| ! | TACTCACACATATTTACATA+TGG | - | chr5_4:14521688-14521707 | None:intergenic | 25.0% |
| CTAGTAATACTTTGATCACA+GGG | - | chr5_4:14517214-14517233 | None:intergenic | 30.0% | |
| ACTAGTAATACTTTGATCAC+AGG | - | chr5_4:14517215-14517234 | None:intergenic | 30.0% | |
| ! | ATCAAAGTATTACTAGTCAC+TGG | + | chr5_4:14517218-14517237 | Msa0839480:CDS | 30.0% |
| GAATAAAATAACCACTCACA+AGG | - | chr5_4:14517475-14517494 | None:intergenic | 30.0% | |
| AATGTAACCAATATGTTCAC+TGG | - | chr5_4:14517588-14517607 | None:intergenic | 30.0% | |
| !! | TTTGATAATGATCCATCCTA+AGG | - | chr5_4:14517625-14517644 | None:intergenic | 30.0% |
| GATGTATGAACAGGAAATTT+AGG | + | chr5_4:14517921-14517940 | Msa0839480:intron | 30.0% | |
| CTGAACTTGTACTTATTCTT+TGG | + | chr5_4:14518304-14518323 | Msa0839480:intron | 30.0% | |
| GAACTTGTACTTATTCTTTG+GGG | + | chr5_4:14518306-14518325 | Msa0839480:intron | 30.0% | |
| ATAAAAACAGCTCCAATCTA+TGG | - | chr5_4:14518335-14518354 | None:intergenic | 30.0% | |
| !!! | AGATTGGAGCTGTTTTTATA+TGG | + | chr5_4:14518336-14518355 | Msa0839480:intron | 30.0% |
| CTTATGTGTACAACATAATG+CGG | + | chr5_4:14518360-14518379 | Msa0839480:CDS | 30.0% | |
| TCAAGAAATGTTCACAAAGA+AGG | + | chr5_4:14518389-14518408 | Msa0839480:CDS | 30.0% | |
| TCTAATCTTCTTATGTTTGC+AGG | + | chr5_4:14518670-14518689 | Msa0839480:intron | 30.0% | |
| !! | GAAAATATGCCTCTGAAATT+TGG | - | chr5_4:14518740-14518759 | None:intergenic | 30.0% |
| ! | ATTTTCCTTATGCAGATTGT+TGG | + | chr5_4:14518897-14518916 | Msa0839480:intron | 30.0% |
| TAAATCCAACAATCTGCATA+AGG | - | chr5_4:14518905-14518924 | None:intergenic | 30.0% | |
| CAGATTGTTGGATTTATTGT+TGG | + | chr5_4:14518909-14518928 | Msa0839480:intron | 30.0% | |
| TATAAGGGTTATTGTTGGAA+TGG | - | chr5_4:14519102-14519121 | None:intergenic | 30.0% | |
| TCCAACAATAACCCTTATAA+TGG | + | chr5_4:14519103-14519122 | Msa0839480:CDS | 30.0% | |
| CCAACAATAACCCTTATAAT+GGG | + | chr5_4:14519104-14519123 | Msa0839480:CDS | 30.0% | |
| !! | TGTTTTACCTTTAAGAAGGT+TGG | - | chr5_4:14519132-14519151 | None:intergenic | 30.0% |
| ATAAATACATCCATGAGATC+AGG | + | chr5_4:14519236-14519255 | Msa0839480:intron | 30.0% | |
| !! | ATATTTGTCCATTTCTAGCA+TGG | - | chr5_4:14519711-14519730 | None:intergenic | 30.0% |
| !! | TCCAGAGATTTTAATAAGTG+GGG | - | chr5_4:14519828-14519847 | None:intergenic | 30.0% |
| !! | GATCCAGAGATTTTAATAAG+TGG | - | chr5_4:14519830-14519849 | None:intergenic | 30.0% |
| ATGTGGTATTAAAGTCTCTT+GGG | - | chr5_4:14520031-14520050 | None:intergenic | 30.0% | |
| !! | ACTTTGAGACATTAGGTATA+TGG | + | chr5_4:14520062-14520081 | Msa0839480:intron | 30.0% |
| !!! | TAATGTCTTAAGGTTTTGAG+TGG | - | chr5_4:14520308-14520327 | None:intergenic | 30.0% |
| ACTCAAAACCTTAAGACATT+AGG | + | chr5_4:14520307-14520326 | Msa0839480:intron | 30.0% | |
| ACCTTAAGACATTAGGTATT+TGG | + | chr5_4:14520314-14520333 | Msa0839480:intron | 30.0% | |
| CCTTAAGACATTAGGTATTT+GGG | + | chr5_4:14520315-14520334 | Msa0839480:intron | 30.0% | |
| ! | CAAATTAGCCTCTATATGTT+GGG | - | chr5_4:14520412-14520431 | None:intergenic | 30.0% |
| ! | ACAAATTAGCCTCTATATGT+TGG | - | chr5_4:14520413-14520432 | None:intergenic | 30.0% |
| GACCAATATTTACAAATTCG+AGG | + | chr5_4:14520714-14520733 | Msa0839480:intron | 30.0% | |
| GTCCTCGAATTTGTAAATAT+TGG | - | chr5_4:14520719-14520738 | None:intergenic | 30.0% | |
| TGTATAAGAAACAAGTGGAT+AGG | - | chr5_4:14520749-14520768 | None:intergenic | 30.0% | |
| ! | ACTCCATTTTGGACAATTAT+AGG | + | chr5_4:14520865-14520884 | Msa0839480:CDS | 30.0% |
| ! | AAATTGGGAGCATGATATAT+CGG | - | chr5_4:14520903-14520922 | None:intergenic | 30.0% |
| ! | TATATCATGCTCCCAATTTT+TGG | + | chr5_4:14520904-14520923 | Msa0839480:CDS | 30.0% |
| ! | TATTAAAGGTGCAACACATT+TGG | + | chr5_4:14520936-14520955 | Msa0839480:CDS | 30.0% |
| ! | ATTAAAGGTGCAACACATTT+GGG | + | chr5_4:14520937-14520956 | Msa0839480:CDS | 30.0% |
| ! | GAGAAGTACAAACTGATATA+AGG | - | chr5_4:14520980-14520999 | None:intergenic | 30.0% |
| GTATTACCTATATTCATAGC+TGG | - | chr5_4:14521021-14521040 | None:intergenic | 30.0% | |
| AATGTTCAGTTATGATGCTA+TGG | + | chr5_4:14521172-14521191 | Msa0839480:CDS | 30.0% | |
| !! | TAGTTGAGTTGAAACTTGAA+AGG | - | chr5_4:14521351-14521370 | None:intergenic | 30.0% |
| AGCTTCCTCATATATGTAAA+TGG | + | chr5_4:14521388-14521407 | Msa0839480:three_prime_UTR | 30.0% | |
| GCTTCCTCATATATGTAAAT+GGG | + | chr5_4:14521389-14521408 | Msa0839480:three_prime_UTR | 30.0% | |
| CTTCCTCATATATGTAAATG+GGG | + | chr5_4:14521390-14521409 | Msa0839480:three_prime_UTR | 30.0% | |
| ATTCCCCATTTACATATATG+AGG | - | chr5_4:14521396-14521415 | None:intergenic | 30.0% | |
| TTGCAATTTATCTGCATTCA+GGG | - | chr5_4:14521463-14521482 | None:intergenic | 30.0% | |
| TTTGCAATTTATCTGCATTC+AGG | - | chr5_4:14521464-14521483 | None:intergenic | 30.0% | |
| ACTAACAAAGTCTACATTCA+GGG | - | chr5_4:14521492-14521511 | None:intergenic | 30.0% | |
| TTTGCATATTATCTGCATTC+AGG | + | chr5_4:14521612-14521631 | Msa0839480:intron | 30.0% | |
| TTGCATATTATCTGCATTCA+GGG | + | chr5_4:14521613-14521632 | Msa0839480:intron | 30.0% | |
| CTCACACATATTTACATATG+GGG | - | chr5_4:14521686-14521705 | None:intergenic | 30.0% | |
| GTATTACTAGTCACTGGAAT+TGG | + | chr5_4:14517224-14517243 | Msa0839480:CDS | 35.0% | |
| ! | ATTTGTTGGGAAAAGATGCA+AGG | + | chr5_4:14517273-14517292 | Msa0839480:CDS | 35.0% |
| GTACATTATGTGTTCAATCC+TGG | + | chr5_4:14517399-14517418 | Msa0839480:CDS | 35.0% | |
| TAATGTTGTATCCTTGTGAG+TGG | + | chr5_4:14517461-14517480 | Msa0839480:intron | 35.0% | |
| ! | AAAGACAAAGGTAGTCCTTT+TGG | + | chr5_4:14517978-14517997 | Msa0839480:CDS | 35.0% |
| CTGATGTCTGCTATCAATAT+GGG | + | chr5_4:14518006-14518025 | Msa0839480:CDS | 35.0% | |
| ! | ACTATGTGAATCATGGGTTA+TGG | + | chr5_4:14518162-14518181 | Msa0839480:intron | 35.0% |
| TGTATCAGAATCACTCATAG+AGG | + | chr5_4:14518454-14518473 | Msa0839480:CDS | 35.0% | |
| ! | ATATTTTCACCAGCAACTCT+TGG | + | chr5_4:14518752-14518771 | Msa0839480:CDS | 35.0% |
| ! | TATTTTCACCAGCAACTCTT+GGG | + | chr5_4:14518753-14518772 | Msa0839480:CDS | 35.0% |
| TTATTGTTGGTGTAGTTCCT+TGG | + | chr5_4:14518922-14518941 | Msa0839480:CDS | 35.0% | |
| ATCATTAACCTACGTAACCA+AGG | - | chr5_4:14518942-14518961 | None:intergenic | 35.0% | |
| TGGTTACGTAGGTTAATGAT+TGG | + | chr5_4:14518942-14518961 | Msa0839480:CDS | 35.0% | |
| GCATCACTGCATGTAATAAT+AGG | - | chr5_4:14519077-14519096 | None:intergenic | 35.0% | |
| CCCATTATAAGGGTTATTGT+TGG | - | chr5_4:14519107-14519126 | None:intergenic | 35.0% | |
| AAAATACAATACACGTGTGG+AGG | - | chr5_4:14519306-14519325 | None:intergenic | 35.0% | |
| !! | ACGATATGCTCTGAGATAAT+TGG | - | chr5_4:14519570-14519589 | None:intergenic | 35.0% |
| ACCCCACTTATTAAAATCTC+TGG | + | chr5_4:14519824-14519843 | Msa0839480:intron | 35.0% | |
| TTTACAATCACATGCAGTGA+CGG | - | chr5_4:14519852-14519871 | None:intergenic | 35.0% | |
| TTTACAATCTCATGCAGTGA+CGG | - | chr5_4:14519896-14519915 | None:intergenic | 35.0% | |
| TCTATCATTAGAGGTTGTGA+CGG | + | chr5_4:14519946-14519965 | Msa0839480:intron | 35.0% | |
| GATGTGGTATTAAAGTCTCT+TGG | - | chr5_4:14520032-14520051 | None:intergenic | 35.0% | |
| !!! | CAAAGTTTTGAATGGAGATG+TGG | - | chr5_4:14520048-14520067 | None:intergenic | 35.0% |
| ! | GATTAAGTCCCATATCGATT+AGG | - | chr5_4:14520122-14520141 | None:intergenic | 35.0% |
| CCCAAATACCTAATGTCTTA+AGG | - | chr5_4:14520318-14520337 | None:intergenic | 35.0% | |
| ACTTGAAACCCAACATATAG+AGG | + | chr5_4:14520401-14520420 | Msa0839480:intron | 35.0% | |
| CTTATCAATGACAGATTGGT+CGG | - | chr5_4:14520502-14520521 | None:intergenic | 35.0% | |
| ! | AGGTCTTATCAATGACAGAT+TGG | - | chr5_4:14520506-14520525 | None:intergenic | 35.0% |
| TTACCTATATTCATAGCTGG+TGG | - | chr5_4:14521018-14521037 | None:intergenic | 35.0% | |
| GGTACCATAGCACAATTATT+TGG | + | chr5_4:14521135-14521154 | Msa0839480:intron | 35.0% | |
| AGCTCCAAATAATTGTGCTA+TGG | - | chr5_4:14521142-14521161 | None:intergenic | 35.0% | |
| ! | ATAGCACAATTATTTGGAGC+TGG | + | chr5_4:14521141-14521160 | Msa0839480:CDS | 35.0% |
| TATTCATTGCTATGGACCTA+TGG | + | chr5_4:14521271-14521290 | Msa0839480:three_prime_UTR | 35.0% | |
| GACTAACAAAGTCTACATTC+AGG | - | chr5_4:14521493-14521512 | None:intergenic | 35.0% | |
| TCAGGGACTAAATTGACTAA+CGG | - | chr5_4:14521507-14521526 | None:intergenic | 35.0% | |
| AATATGTGTGAGTATGCAAC+AGG | + | chr5_4:14521694-14521713 | Msa0839480:intron | 35.0% | |
| ATTATCCGCATATATGCATG+CGG | + | chr5_4:14521739-14521758 | Msa0839480:three_prime_UTR | 35.0% | |
| !! | TGACAAAGGCATCTTCTAAG+GGG | - | chr5_4:14516939-14516958 | None:intergenic | 40.0% |
| !! | CTGACAAAGGCATCTTCTAA+GGG | - | chr5_4:14516940-14516959 | None:intergenic | 40.0% |
| !! | ACTGACAAAGGCATCTTCTA+AGG | - | chr5_4:14516941-14516960 | None:intergenic | 40.0% |
| TAACATGAAGAACACGAGGA+GGG | - | chr5_4:14517005-14517024 | None:intergenic | 40.0% | |
| TTAACATGAAGAACACGAGG+AGG | - | chr5_4:14517006-14517025 | None:intergenic | 40.0% | |
| GGTTTAACATGAAGAACACG+AGG | - | chr5_4:14517009-14517028 | None:intergenic | 40.0% | |
| AAATTACCACCAATCAGACC+AGG | - | chr5_4:14517420-14517439 | None:intergenic | 40.0% | |
| ! | TGGTCTGATTGGTGGTAATT+TGG | + | chr5_4:14517419-14517438 | Msa0839480:CDS | 40.0% |
| GTTCATGCCAGTGAACATAT+TGG | + | chr5_4:14517578-14517597 | Msa0839480:CDS | 40.0% | |
| ! | TTTTTGTTAGGCTCAGCCTT+AGG | + | chr5_4:14517606-14517625 | Msa0839480:CDS | 40.0% |
| ATGAGACCTTCTATGTGTCT+AGG | - | chr5_4:14517660-14517679 | None:intergenic | 40.0% | |
| CACATAGAAGGTCTCATAGT+AGG | + | chr5_4:14517663-14517682 | Msa0839480:CDS | 40.0% | |
| ATATCGAACCTGAGACTTTG+AGG | - | chr5_4:14517773-14517792 | None:intergenic | 40.0% | |
| CCTTTGTCTTTGCATATAGC+TGG | - | chr5_4:14517969-14517988 | None:intergenic | 40.0% | |
| CCAGCTATATGCAAAGACAA+AGG | + | chr5_4:14517966-14517985 | Msa0839480:CDS | 40.0% | |
| ! | CCATATTGATAGCAGACATC+AGG | - | chr5_4:14518008-14518027 | None:intergenic | 40.0% |
| CCTGATGTCTGCTATCAATA+TGG | + | chr5_4:14518005-14518024 | Msa0839480:CDS | 40.0% | |
| TGTCTGCTATCAATATGGGA+TGG | + | chr5_4:14518010-14518029 | Msa0839480:CDS | 40.0% | |
| GGCTTATGCTTCACTTTCTA+TGG | + | chr5_4:14518031-14518050 | Msa0839480:CDS | 40.0% | |
| ! | TCTTTGGGGAAACCATAGAT+TGG | + | chr5_4:14518320-14518339 | Msa0839480:intron | 40.0% |
| AAGTCCAACAAAAGGCAATG+TGG | + | chr5_4:14518493-14518512 | Msa0839480:CDS | 40.0% | |
| ! | TCATCCACATTGCCTTTTGT+TGG | - | chr5_4:14518500-14518519 | None:intergenic | 40.0% |
| TGAGTCTCAGCAGAAAATTC+AGG | + | chr5_4:14518547-14518566 | Msa0839480:CDS | 40.0% | |
| TTAGGCAACCCAAATTTCAG+AGG | + | chr5_4:14518728-14518747 | Msa0839480:CDS | 40.0% | |
| ! | ATTTTCACCAGCAACTCTTG+GGG | + | chr5_4:14518754-14518773 | Msa0839480:CDS | 40.0% |
| GAGTCTTCAATCACATGAAG+AGG | - | chr5_4:14518978-14518997 | None:intergenic | 40.0% | |
| AAGACTCTGCTTCCATGTTA+GGG | + | chr5_4:14518991-14519010 | Msa0839480:CDS | 40.0% | |
| TTGAGATGCATACCCTAACA+TGG | - | chr5_4:14519006-14519025 | None:intergenic | 40.0% | |
| AAGGTTGGCACCCATTATAA+GGG | - | chr5_4:14519117-14519136 | None:intergenic | 40.0% | |
| CTATCATTAGAGGTTGTGAC+GGG | + | chr5_4:14519947-14519966 | Msa0839480:intron | 40.0% | |
| TACTGTAACATCAACGTGGA+GGG | - | chr5_4:14519992-14520011 | None:intergenic | 40.0% | |
| ACACTACTGTAACATCAACG+TGG | - | chr5_4:14519996-14520015 | None:intergenic | 40.0% | |
| CGTTGATGTTACAGTAGTGT+TGG | + | chr5_4:14519996-14520015 | Msa0839480:intron | 40.0% | |
| !! | TGTTACAGTAGTGTTGGTCA+AGG | + | chr5_4:14520002-14520021 | Msa0839480:intron | 40.0% |
| !! | GTTACAGTAGTGTTGGTCAA+GGG | + | chr5_4:14520003-14520022 | Msa0839480:intron | 40.0% |
| ! | TAGGCTTTGATACCACTTGT+TGG | + | chr5_4:14520208-14520227 | Msa0839480:intron | 40.0% |
| ! | TACCACTTGTTGGAAGAATC+TGG | + | chr5_4:14520218-14520237 | Msa0839480:intron | 40.0% |
| ! | ACCACTTGTTGGAAGAATCT+GGG | + | chr5_4:14520219-14520238 | Msa0839480:intron | 40.0% |
| ATTTAGACCATTGTCGCTCT+CGG | - | chr5_4:14520250-14520269 | None:intergenic | 40.0% | |
| TCAAAGTCTCTTAGAGATCC+TGG | - | chr5_4:14520275-14520294 | None:intergenic | 40.0% | |
| !!! | TAAGGTTTTGAGTGGAGATG+TGG | - | chr5_4:14520300-14520319 | None:intergenic | 40.0% |
| ! | GATTAAGTCTCACATCGACT+AGG | - | chr5_4:14520375-14520394 | None:intergenic | 40.0% |
| GATGAATGAGCAGGATTGAA+GGG | + | chr5_4:14520835-14520854 | Msa0839480:intron | 40.0% | |
| CTTCCACCAGCTATGAATAT+AGG | + | chr5_4:14521012-14521031 | Msa0839480:CDS | 40.0% | |
| TTTGGTCAACCTACTTCATG+TGG | + | chr5_4:14521226-14521245 | Msa0839480:CDS | 40.0% | |
| ! | TAGTCACTTTAGTCCCTGAA+TGG | + | chr5_4:14521416-14521435 | Msa0839480:intron | 40.0% |
| ! | AGTCACTTTAGTCCCTGAAT+GGG | + | chr5_4:14521417-14521436 | Msa0839480:intron | 40.0% |
| GTCAATTTAGTCCCTGAATG+TGG | + | chr5_4:14521449-14521468 | Msa0839480:intron | 40.0% | |
| ACTAACGAAGTCCACATTCA+GGG | - | chr5_4:14521556-14521575 | None:intergenic | 40.0% | |
| ! | AGTCACTTTAGTCCCTGAAT+GGG | - | chr5_4:14521417-14521436 | None:intergenic | 40.0% |
| ! | TAGTCACTTTAGTCCCTGAA+TGG | - | chr5_4:14521416-14521435 | None:intergenic | 40.0% |
| GTGTTCAATCCTGGTCTGAT+TGG | + | chr5_4:14517408-14517427 | Msa0839480:CDS | 45.0% | |
| TTCAATCCTGGTCTGATTGG+TGG | + | chr5_4:14517411-14517430 | Msa0839480:CDS | 45.0% | |
| AAGCCTCCTAGACACATAGA+AGG | + | chr5_4:14517651-14517670 | Msa0839480:CDS | 45.0% | |
| AGACCTTCTATGTGTCTAGG+AGG | - | chr5_4:14517657-14517676 | None:intergenic | 45.0% | |
| ATAGTAGGTGTCTGTTCTGC+AGG | + | chr5_4:14517678-14517697 | Msa0839480:CDS | 45.0% | |
| CAGACATCAGGATCTCCAAA+AGG | - | chr5_4:14517996-14518015 | None:intergenic | 45.0% | |
| AAGTAGTGACCCCATTACCT+TGG | + | chr5_4:14518418-14518437 | Msa0839480:CDS | 45.0% | |
| GTGTAGTTCCTTGGTTACGT+AGG | + | chr5_4:14518931-14518950 | Msa0839480:CDS | 45.0% | |
| GAAGACTCTGCTTCCATGTT+AGG | + | chr5_4:14518990-14519009 | Msa0839480:CDS | 45.0% | |
| GAAGGTTGGCACCCATTATA+AGG | - | chr5_4:14519118-14519137 | None:intergenic | 45.0% | |
| ATGGGTGCCAACCTTCTTAA+AGG | + | chr5_4:14519122-14519141 | Msa0839480:CDS | 45.0% | |
| CTCCTTGAACTTGTAAGCAC+TGG | + | chr5_4:14519184-14519203 | Msa0839480:intron | 45.0% | |
| GACCAGTGCTTACAAGTTCA+AGG | - | chr5_4:14519189-14519208 | None:intergenic | 45.0% | |
| TAGATCTGTGCCTGATCTCA+TGG | - | chr5_4:14519249-14519268 | None:intergenic | 45.0% | |
| ATCAGGCACAGATCTAGTGT+GGG | + | chr5_4:14519253-14519272 | Msa0839480:intron | 45.0% | |
| GTGCTCTTAGAACACTCGTT+AGG | - | chr5_4:14519435-14519454 | None:intergenic | 45.0% | |
| ACGGGACAACGTTGAATTTG+TGG | + | chr5_4:14519965-14519984 | Msa0839480:intron | 45.0% | |
| CTACTGTAACATCAACGTGG+AGG | - | chr5_4:14519993-14520012 | None:intergenic | 45.0% | |
| AAAGCCTAGTTAAGCTCCGT+GGG | - | chr5_4:14520196-14520215 | None:intergenic | 45.0% | |
| TCCCAGATTCTTCCAACAAG+TGG | - | chr5_4:14520223-14520242 | None:intergenic | 45.0% | |
| CGACAATGGTCTAAATGTCC+AGG | + | chr5_4:14520254-14520273 | Msa0839480:intron | 45.0% | |
| ! | AGTCTCACATCGACTAGGAA+AGG | - | chr5_4:14520370-14520389 | None:intergenic | 45.0% |
| TCGGTAATTACAATCGTGCG+AGG | - | chr5_4:14520483-14520502 | None:intergenic | 45.0% | |
| GGATGAATGAGCAGGATTGA+AGG | + | chr5_4:14520834-14520853 | Msa0839480:intron | 45.0% | |
| ! | AGGGAGCAAGTACTCCATTT+TGG | + | chr5_4:14520854-14520873 | Msa0839480:CDS | 45.0% |
| ! | AGGTGCAACACATTTGGGTT+TGG | + | chr5_4:14520942-14520961 | Msa0839480:CDS | 45.0% |
| ! | CTGGTGGAAGTGCATATTGA+AGG | - | chr5_4:14521002-14521021 | None:intergenic | 45.0% |
| TGTGCTATGGTACCTGACAT+AGG | - | chr5_4:14521129-14521148 | None:intergenic | 45.0% | |
| GATGCTATGGACCTATGCAT+TGG | + | chr5_4:14521185-14521204 | Msa0839480:CDS | 45.0% | |
| ! | CTATGCATTGGCGTCAATTG+CGG | + | chr5_4:14521197-14521216 | Msa0839480:CDS | 45.0% |
| AGAGACAAGCCACATGAAGT+AGG | - | chr5_4:14521238-14521257 | None:intergenic | 45.0% | |
| ! | GTCACTTTAGTCCCTGAATG+GGG | + | chr5_4:14521418-14521437 | Msa0839480:intron | 45.0% |
| ACTAACGGAGTCTGCATTCA+GGG | - | chr5_4:14521524-14521543 | None:intergenic | 45.0% | |
| GACTAACGAAGTCCACATTC+AGG | - | chr5_4:14521557-14521576 | None:intergenic | 45.0% | |
| TCCCTGAAATTGACCATGCA+GGG | + | chr5_4:14521584-14521603 | Msa0839480:intron | 45.0% | |
| TCCCTGCATGGTCAATTTCA+GGG | - | chr5_4:14521588-14521607 | None:intergenic | 45.0% | |
| TATGCAAAACAGTCCCTGCA+TGG | - | chr5_4:14521600-14521619 | None:intergenic | 45.0% | |
| ! | GTCACTTTAGTCCCTGAATG+GGG | - | chr5_4:14521418-14521437 | None:intergenic | 45.0% |
| !! | TATTATTTAAATTAAACTAA+AGG | - | chr5_4:14520801-14520820 | None:intergenic | 5.0% |
| TGTTAGGCTCAGCCTTAGGA+TGG | + | chr5_4:14517610-14517629 | Msa0839480:CDS | 50.0% | |
| ! | TTGAGGAGGAGCATACTCTC+AGG | - | chr5_4:14517756-14517775 | None:intergenic | 50.0% |
| ATGCTCCTCCTCAAAGTCTC+AGG | + | chr5_4:14517762-14517781 | Msa0839480:intron | 50.0% | |
| ! | TCGAACCTGAGACTTTGAGG+AGG | - | chr5_4:14517770-14517789 | None:intergenic | 50.0% |
| TAGTGACCCCATTACCTTGG+AGG | + | chr5_4:14518421-14518440 | Msa0839480:CDS | 50.0% | |
| CTGAAGCCTCCAAGGTAATG+GGG | - | chr5_4:14518430-14518449 | None:intergenic | 50.0% | |
| CCTGAAGCCTCCAAGGTAAT+GGG | - | chr5_4:14518431-14518450 | None:intergenic | 50.0% | |
| TCCTGAAGCCTCCAAGGTAA+TGG | - | chr5_4:14518432-14518451 | None:intergenic | 50.0% | |
| TACATCTCCTGAAGCCTCCA+AGG | - | chr5_4:14518438-14518457 | None:intergenic | 50.0% | |
| GATCAGGCACAGATCTAGTG+TGG | + | chr5_4:14519252-14519271 | Msa0839480:intron | 50.0% | |
| TCAGGCACAGATCTAGTGTG+GGG | + | chr5_4:14519254-14519273 | Msa0839480:intron | 50.0% | |
| AGATCTAGTGTGGGGGCAAT+GGG | + | chr5_4:14519262-14519281 | Msa0839480:intron | 50.0% | |
| ATACACGTGTGGAGGCAAGT+GGG | - | chr5_4:14519298-14519317 | None:intergenic | 50.0% | |
| AATACACGTGTGGAGGCAAG+TGG | - | chr5_4:14519299-14519318 | None:intergenic | 50.0% | |
| TGTTGTGACTGACGCTACGT+TGG | + | chr5_4:14519647-14519666 | Msa0839480:intron | 50.0% | |
| TAGCCTGATCCACACTAGCT+AGG | + | chr5_4:14520153-14520172 | Msa0839480:intron | 50.0% | |
| GATCCTAGCTAGTGTGGATC+AGG | - | chr5_4:14520159-14520178 | None:intergenic | 50.0% | |
| AAGCCTAGTTAAGCTCCGTG+GGG | - | chr5_4:14520195-14520214 | None:intergenic | 50.0% | |
| CAAAGCCTAGTTAAGCTCCG+TGG | - | chr5_4:14520197-14520216 | None:intergenic | 50.0% | |
| GTTGGTGTGGATGAATGAGC+AGG | + | chr5_4:14520826-14520845 | Msa0839480:intron | 50.0% | |
| CGCAATTGACGCCAATGCAT+AGG | - | chr5_4:14521199-14521218 | None:intergenic | 50.0% | |
| CGTCAATTGCGGTGACTCTT+TGG | + | chr5_4:14521208-14521227 | Msa0839480:CDS | 50.0% | |
| GACGAATCGTTCCCCATTCA+GGG | - | chr5_4:14521644-14521663 | None:intergenic | 50.0% | |
| TGACGAATCGTTCCCCATTC+AGG | - | chr5_4:14521643-14521662 | None:intergenic | 50.0% | |
| GACTAACGGAGTCTGCATTC+AGG | - | chr5_4:14521525-14521544 | None:intergenic | 50.0% | |
| GTCCCTGAAATTGACCATGC+AGG | + | chr5_4:14521583-14521602 | Msa0839480:intron | 50.0% | |
| GTCCCTGCATGGTCAATTTC+AGG | - | chr5_4:14521589-14521608 | None:intergenic | 50.0% | |
| TGACGAATCGTTCCCCATTC+AGG | + | chr5_4:14521643-14521662 | Msa0839480:intron | 50.0% | |
| GACGAATCGTTCCCCATTCA+GGG | + | chr5_4:14521644-14521663 | Msa0839480:intron | 50.0% | |
| GGAGCATACTCTCAGGTCTC+AGG | - | chr5_4:14517749-14517768 | None:intergenic | 55.0% | |
| CCCATTACCTTGGAGGCTTC+AGG | + | chr5_4:14518428-14518447 | Msa0839480:CDS | 55.0% | |
| TTCACCAGCAACTCTTGGGG+CGG | + | chr5_4:14518757-14518776 | Msa0839480:CDS | 55.0% | |
| CAGGCACAGATCTAGTGTGG+GGG | + | chr5_4:14519255-14519274 | Msa0839480:intron | 55.0% | |
| CAGATCTAGTGTGGGGGCAA+TGG | + | chr5_4:14519261-14519280 | Msa0839480:intron | 55.0% | |
| GATCTAGTGTGGGGGCAATG+GGG | + | chr5_4:14519263-14519282 | Msa0839480:intron | 55.0% | |
| TACACGTGTGGAGGCAAGTG+GGG | - | chr5_4:14519297-14519316 | None:intergenic | 55.0% | |
| TGTGACTGACGCTACGTTGG+TGG | + | chr5_4:14519650-14519669 | Msa0839480:intron | 55.0% | |
| GAGCAGGATCCTAGCTAGTG+TGG | - | chr5_4:14520165-14520184 | None:intergenic | 55.0% | |
| AGCCTAGTTAAGCTCCGTGG+GGG | - | chr5_4:14520194-14520213 | None:intergenic | 55.0% | |
| CATACCGCCCCAAGAGTTGC+TGG | - | chr5_4:14518764-14518783 | None:intergenic | 60.0% | |
| TTAAGCTCCGTGGGGGGATC+GGG | - | chr5_4:14520187-14520206 | None:intergenic | 60.0% | |
| GTTAAGCTCCGTGGGGGGAT+CGG | - | chr5_4:14520188-14520207 | None:intergenic | 60.0% | |
| TCCCCCCACGGAGCTTAACT+AGG | + | chr5_4:14520189-14520208 | Msa0839480:intron | 60.0% | |
| GCCTAGTTAAGCTCCGTGGG+GGG | - | chr5_4:14520193-14520212 | None:intergenic | 60.0% | |
| !! | GGAAGCGCCGAGAGCGACAA+TGG | + | chr5_4:14520240-14520259 | Msa0839480:intron | 65.0% |
| TCCTGCTCCCGATCCCCCCA+CGG | + | chr5_4:14520177-14520196 | Msa0839480:intron | 70.0% | |
| TCCGTGGGGGGATCGGGAGC+AGG | - | chr5_4:14520181-14520200 | None:intergenic | 75.0% |
| Chromosome | Type | Strat | End | Strand | Name |
|---|---|---|---|---|---|
| chr5_4 | gene | 14516865 | 14521762 | 14516865 | ID=Msa0839480;Name=Msa0839480 |
| chr5_4 | mRNA | 14516865 | 14521762 | 14516865 | ID=Msa0839480-mRNA-1;Parent=Msa0839480;Name=Msa0839480-mRNA-1;_AED=0.20;_eAED=0.20;_QI=134|1|1|1|0.81|0.66|12|218|414 |
| chr5_4 | exon | 14516865 | 14516954 | 14516865 | ID=Msa0839480-mRNA-1:exon:6329;Parent=Msa0839480-mRNA-1 |
| chr5_4 | exon | 14517132 | 14517310 | 14517132 | ID=Msa0839480-mRNA-1:exon:6330;Parent=Msa0839480-mRNA-1 |
| chr5_4 | exon | 14517396 | 14517475 | 14517396 | ID=Msa0839480-mRNA-1:exon:6331;Parent=Msa0839480-mRNA-1 |
| chr5_4 | exon | 14517575 | 14517699 | 14517575 | ID=Msa0839480-mRNA-1:exon:6332;Parent=Msa0839480-mRNA-1 |
| chr5_4 | exon | 14517934 | 14518055 | 14517934 | ID=Msa0839480-mRNA-1:exon:6333;Parent=Msa0839480-mRNA-1 |
| chr5_4 | exon | 14518338 | 14518568 | 14518338 | ID=Msa0839480-mRNA-1:exon:6334;Parent=Msa0839480-mRNA-1 |
| chr5_4 | exon | 14518692 | 14518778 | 14518692 | ID=Msa0839480-mRNA-1:exon:6335;Parent=Msa0839480-mRNA-1 |
| chr5_4 | exon | 14518912 | 14519012 | 14518912 | ID=Msa0839480-mRNA-1:exon:6336;Parent=Msa0839480-mRNA-1 |
| chr5_4 | exon | 14519091 | 14519143 | 14519091 | ID=Msa0839480-mRNA-1:exon:6337;Parent=Msa0839480-mRNA-1 |
| chr5_4 | exon | 14520848 | 14521033 | 14520848 | ID=Msa0839480-mRNA-1:exon:6338;Parent=Msa0839480-mRNA-1 |
| chr5_4 | exon | 14521136 | 14521410 | 14521136 | ID=Msa0839480-mRNA-1:exon:6339;Parent=Msa0839480-mRNA-1 |
| chr5_4 | exon | 14521695 | 14521762 | 14521695 | ID=Msa0839480-mRNA-1:exon:6340;Parent=Msa0839480-mRNA-1 |
| chr5_4 | five_prime_UTR | 14516865 | 14516954 | 14516865 | ID=Msa0839480-mRNA-1:five_prime_utr;Parent=Msa0839480-mRNA-1 |
| chr5_4 | five_prime_UTR | 14517132 | 14517175 | 14517132 | ID=Msa0839480-mRNA-1:five_prime_utr;Parent=Msa0839480-mRNA-1 |
| chr5_4 | CDS | 14517176 | 14517310 | 14517176 | ID=Msa0839480-mRNA-1:cds;Parent=Msa0839480-mRNA-1 |
| chr5_4 | CDS | 14517396 | 14517475 | 14517396 | ID=Msa0839480-mRNA-1:cds;Parent=Msa0839480-mRNA-1 |
| chr5_4 | CDS | 14517575 | 14517699 | 14517575 | ID=Msa0839480-mRNA-1:cds;Parent=Msa0839480-mRNA-1 |
| chr5_4 | CDS | 14517934 | 14518055 | 14517934 | ID=Msa0839480-mRNA-1:cds;Parent=Msa0839480-mRNA-1 |
| chr5_4 | CDS | 14518338 | 14518568 | 14518338 | ID=Msa0839480-mRNA-1:cds;Parent=Msa0839480-mRNA-1 |
| chr5_4 | CDS | 14518692 | 14518778 | 14518692 | ID=Msa0839480-mRNA-1:cds;Parent=Msa0839480-mRNA-1 |
| chr5_4 | CDS | 14518912 | 14519012 | 14518912 | ID=Msa0839480-mRNA-1:cds;Parent=Msa0839480-mRNA-1 |
| chr5_4 | CDS | 14519091 | 14519143 | 14519091 | ID=Msa0839480-mRNA-1:cds;Parent=Msa0839480-mRNA-1 |
| chr5_4 | CDS | 14520848 | 14521033 | 14520848 | ID=Msa0839480-mRNA-1:cds;Parent=Msa0839480-mRNA-1 |
| chr5_4 | CDS | 14521136 | 14521260 | 14521136 | ID=Msa0839480-mRNA-1:cds;Parent=Msa0839480-mRNA-1 |
| chr5_4 | three_prime_UTR | 14521261 | 14521410 | 14521261 | ID=Msa0839480-mRNA-1:three_prime_utr;Parent=Msa0839480-mRNA-1 |
| chr5_4 | three_prime_UTR | 14521695 | 14521762 | 14521695 | ID=Msa0839480-mRNA-1:three_prime_utr;Parent=Msa0839480-mRNA-1 |
| Gene Sequence |
| Protein sequence |
