AlfalfaGEDB Alfalfa Gene Editing Database

M. sativa cultivar zhongmu-4 / Msa0229920

Query id Subject id identity % alignment length mismatches gap openings q. start q. end s. start s. end e-value bit score
Msa0229920 MtrunA17_Chr7g0254611 93.525 1359 54 4 1 1329 1 1355 0.0 2393
Msa0229920 MtrunA17_Chr3g0104201 53.247 154 57 5 360 509 231 373 5.62e-36 142
Msa0229920 MtrunA17_Chr5g0429551 46.667 150 67 6 336 480 263 404 1.48e-27 121
Query id Subject id identity % alignment length mismatches gap openings q. start q. end s. start s. end e-value bit score
Msa0229920 AT5G17910.3 41.472 815 358 24 6 752 7 770 1.01e-128 431
Msa0229920 AT5G17910.1 41.472 815 358 24 6 752 7 770 1.01e-128 431
Msa0229920 AT5G17910.2 41.472 815 358 24 6 752 7 770 1.01e-128 431
Msa0229920 AT2G29620.4 57.554 139 49 4 360 495 222 353 3.07e-33 139
Msa0229920 AT2G29620.5 57.554 139 49 4 360 495 222 353 3.36e-33 139
Msa0229920 AT2G29620.1 57.554 139 49 4 360 495 222 353 3.36e-33 139
Msa0229920 AT2G29620.3 57.554 139 49 4 360 495 222 353 3.36e-33 139
Msa0229920 AT2G29620.6 57.554 139 49 4 360 495 222 353 3.36e-33 139
Msa0229920 AT2G29620.2 57.554 139 49 4 360 495 222 353 3.36e-33 139
Msa0229920 AT1G07330.1 50.625 160 63 6 360 516 156 302 6.19e-32 134
Msa0229920 AT1G07330.2 50.625 160 63 6 360 516 224 370 1.55e-31 134
Msa0229920 AT5G58880.1 46.405 153 63 5 363 496 186 338 4.98e-20 97.4

Find 327 sgRNAs with CRISPR-Local

Find 470 sgRNAs with CRISPR-GE


CRISPR-Local

CRISPR-Local
sgRNA_sequence on_target_score Position Region
CTTGGGACCCTTCTCAGTTT+TGG 0.127452 2_2:-1708856 Msa0229920:CDS
TCCCACATATCCTTGATTTC+TGG 0.170727 2_2:-1709426 Msa0229920:intron
TTGCCATCATCCATTTCTTT+TGG 0.194807 2_2:-1708977 Msa0229920:CDS
AAGAGAAACCTGATCTTAAA+AGG 0.196585 2_2:-1707661 Msa0229920:CDS
TGGGTTGAAGTTCTCGATTC+TGG 0.198413 2_2:+1706984 None:intergenic
GACTGAATTAACATCTAATT+TGG 0.205824 2_2:-1707345 Msa0229920:CDS
ATACATCAAGTAGCCGTTTC+TGG 0.229119 2_2:-1703546 Msa0229920:three_prime_UTR
AGATCAGGTTTCTCTTCATT+TGG 0.244304 2_2:+1707668 None:intergenic
GAAAAGGGTGTAACTGATTC+AGG 0.249749 2_2:-1706483 Msa0229920:CDS
AAGCAACATCAATATCTTCT+AGG 0.250336 2_2:+1704205 None:intergenic
CAGCATGAGAACGAAGTAAA+AGG 0.253167 2_2:-1708568 Msa0229920:CDS
CCAGTGGGTGAACGGAATTC+AGG 0.255586 2_2:+1704720 None:intergenic
CAGAACTCCAGTTGGTAAAT+TGG 0.268938 2_2:-1704037 Msa0229920:CDS
TTGTGTAGTCCAAAAGAAAT+TGG 0.276177 2_2:-1703625 Msa0229920:three_prime_UTR
ACCCTTCAGTGTGAGCAATT+TGG 0.288890 2_2:-1703690 Msa0229920:three_prime_UTR
TTGATTCCTCCACTGAAGTT+TGG 0.289051 2_2:+1706964 None:intergenic
AGGCGGGTTTGATTCATTTA+AGG 0.291619 2_2:-1708368 Msa0229920:CDS
CGAGGAATTCTTGTCAGAAT+TGG 0.293326 2_2:-1704544 Msa0229920:CDS
ACCCACTGGTGAAGTGGATT+TGG 0.293409 2_2:-1704706 Msa0229920:CDS
TCTTCTGCATCTCTTTCTTC+TGG 0.295934 2_2:+1704147 None:intergenic
AGCATGGGACCTTCAGTATT+GGG 0.298527 2_2:-1707569 Msa0229920:CDS
ATGGGATCAGTGATTGAAAT+TGG 0.304328 2_2:-1709054 Msa0229920:CDS
GAAGACGACTCTGAGGATTC+AGG 0.307857 2_2:-1708286 Msa0229920:CDS
AAGAGAGGCATGATATTAAT+TGG 0.312550 2_2:-1707535 Msa0229920:CDS
CCAGATCCATAAGATTCTTT+TGG 0.313682 2_2:+1707948 None:intergenic
GTCTGCACTGCTCTTCTGCT+TGG 0.313976 2_2:-1708874 Msa0229920:CDS
GCAGAATTCTGATAACATTC+TGG 0.314438 2_2:-1704862 Msa0229920:intron
AGAAATAGGCGCAACATTAG+AGG 0.317930 2_2:+1707814 None:intergenic
ATTTCAAGCTCTCCTGTTGC+AGG 0.323313 2_2:+1707170 None:intergenic
CCAAAAGAATCTTATGGATC+TGG 0.323917 2_2:-1707948 Msa0229920:CDS
TGATTCCTCCACTGAAGTTT+GGG 0.324082 2_2:+1706965 None:intergenic
GAATCAGAAGCCACGGAATC+TGG 0.324928 2_2:+1706243 None:intergenic
GGGTTTCGTCTAACAGAAAT+AGG 0.325631 2_2:+1707800 None:intergenic
CATTAGCGGCTCTAGTAATA+AGG 0.328342 2_2:-1704004 Msa0229920:CDS
CATCCTTCCGAGTACAATTA+AGG 0.331057 2_2:-1704301 Msa0229920:CDS
GTTCATCTATGCATGCATTA+GGG 0.334306 2_2:-1706200 Msa0229920:CDS
TTCAGGTTTGTTTCATGAAC+AGG 0.334505 2_2:-1706466 Msa0229920:CDS
ACAGAAAACTCAGCCCTTGC+AGG 0.334907 2_2:+1706537 None:intergenic
AGTTCATCTATGCATGCATT+AGG 0.335962 2_2:-1706201 Msa0229920:CDS
GAGCATCTCTAGTTTCTTCA+TGG 0.340461 2_2:+1704463 None:intergenic
TTATAATTTGATTATAGAAA+TGG 0.347291 2_2:-1703590 Msa0229920:three_prime_UTR
GATCAGGTTTCTCTTCATTT+GGG 0.352237 2_2:+1707669 None:intergenic
TTGAAATTGGAATCAAAGTT+AGG 0.353627 2_2:-1709041 Msa0229920:CDS
GAACTTGCTGACTCAGTATC+TGG 0.355850 2_2:+1707416 None:intergenic
GAGCAATTTGGTATATATAT+AGG 0.360741 2_2:-1703678 Msa0229920:three_prime_UTR
CGCCCAGTTCATCTTGGAAA+CGG 0.360982 2_2:-1708327 Msa0229920:CDS
ATTATCCTCCAGTTTGTCAT+TGG 0.366057 2_2:+1706716 None:intergenic
CTTATTACTAGAGCCGCTAA+TGG 0.369063 2_2:+1704005 None:intergenic
CAGATTTACTTTCATCCTCT+TGG 0.369414 2_2:+1707993 None:intergenic
GGTATTTCGTCGTTTCAAAC+TGG 0.372815 2_2:-1708787 Msa0229920:CDS
CACCCGTTTCCAAGATGAAC+TGG 0.373927 2_2:+1708324 None:intergenic
TCTGTCAAGCTCTGATAAAT+TGG 0.373937 2_2:-1706025 Msa0229920:CDS
CTGAGGATTCAGGGTCTGAT+AGG 0.374468 2_2:-1708276 Msa0229920:CDS
AGCAATTTGGTATATATATA+GGG 0.375056 2_2:-1703677 Msa0229920:three_prime_UTR
TGGCGTTGAAGAAGCGAGTT+TGG 0.380687 2_2:-1708674 Msa0229920:CDS
ATCCAGATCTTGGTGGATAA+TGG 0.381159 2_2:+1706056 None:intergenic
GGATGACCAAAAGAATCTTA+TGG 0.382692 2_2:-1707954 Msa0229920:CDS
TCTGCACTGCTCTTCTGCTT+GGG 0.384208 2_2:-1708873 Msa0229920:CDS
AAGTCTTGTTGTCAAGTTCC+AGG 0.385072 2_2:-1706092 Msa0229920:CDS
TTGATTCCTCGACTGAAGTT+CGG 0.386253 2_2:+1706931 None:intergenic
GCCAGATGATAGTTTGAATC+TGG 0.387118 2_2:+1706384 None:intergenic
TGATTCCTCGACTGAAGTTC+GGG 0.388449 2_2:+1706932 None:intergenic
TTAGATGTTAATTCAGTCTC+TGG 0.389336 2_2:+1707350 None:intergenic
ATGGGATTACCACCCATTCC+TGG 0.392602 2_2:-1707746 Msa0229920:CDS
ATCAATATCTTCTAGGGATC+TGG 0.392909 2_2:+1704212 None:intergenic
AGAGCAGTGCAGACTAAAAC+AGG 0.394367 2_2:+1708883 None:intergenic
GCTGGATGATGTTAACTTGC+AGG 0.394645 2_2:-1708596 Msa0229920:CDS
CAATTCTCCAACTCCATCAT+TGG 0.397529 2_2:+1704812 None:intergenic
TGGTGGGTGTTAAAGATGAT+AGG 0.397636 2_2:-1708654 Msa0229920:CDS
TAAATAAGACAAAACTCTTT+CGG 0.399065 2_2:+1703893 None:intergenic
TCTTATGGATCTGGGAACTT+TGG 0.400348 2_2:-1707939 Msa0229920:CDS
TGTATCTGAAAGGATGGTTT+CGG 0.400759 2_2:-1707501 Msa0229920:CDS
GATGATTCTTATCCAGATCT+TGG 0.402368 2_2:+1706046 None:intergenic
TGTCAGAATTGGACACAGTT+GGG 0.405523 2_2:-1704533 Msa0229920:CDS
GTTTCTTCAAGAATGAGTTT+TGG 0.407616 2_2:-1703752 Msa0229920:three_prime_UTR
TTCTCTTCATTTGGGTCGTA+CGG 0.409972 2_2:+1707677 None:intergenic
ATCTAGTTTAGATACTTCAT+TGG 0.411010 2_2:+1706308 None:intergenic
GGGTTGAAGTTCTCGATTCT+GGG 0.412544 2_2:+1706985 None:intergenic
AATGGGAAAGCTCGGGGAGG+CGG 0.413424 2_2:-1708385 Msa0229920:CDS
TCTAAATGTTCTGTTTCTAC+TGG 0.415046 2_2:+1706162 None:intergenic
GTCAGCAAGTTCAGGTGATC+AGG 0.417111 2_2:-1707405 Msa0229920:CDS
CATAACGGGAGTTTCATATA+AGG 0.418793 2_2:+1704776 None:intergenic
AGGGATCTGGCTTCAATGAC+TGG 0.419793 2_2:+1704225 None:intergenic
TCCAATATCCAGAGAAAAGT+TGG 0.420593 2_2:+1706509 None:intergenic
TACCATGGGGTCTTGGCTAA+TGG 0.421052 2_2:-1703810 Msa0229920:three_prime_UTR
CGTCTAGGCTGTAGAATAGA+TGG 0.421928 2_2:+1707716 None:intergenic
GATACTGAGTCAGCAAGTTC+AGG 0.427022 2_2:-1707413 Msa0229920:CDS
TCTGGATATTGGATCAGAAA+AGG 0.427655 2_2:-1706499 Msa0229920:CDS
TGCATAGATGAACTATTAGA+AGG 0.429301 2_2:+1706210 None:intergenic
TTATCCTCCAGTTTGTCATT+GGG 0.432481 2_2:+1706717 None:intergenic
ATTGTTCGCCCAGTTCATCT+TGG 0.433549 2_2:-1708333 Msa0229920:CDS
CAATGAATTTGATTATATGA+AGG 0.434052 2_2:-1704574 Msa0229920:CDS
CACCATTATCCACCAAGATC+TGG 0.434273 2_2:-1706058 Msa0229920:CDS
AGCATGAGAACGAAGTAAAA+GGG 0.436593 2_2:-1708567 Msa0229920:CDS
GATTCATCAGGGAAATCAAA+AGG 0.437699 2_2:+1707779 None:intergenic
GCCCAGTTCATCTTGGAAAC+GGG 0.438222 2_2:-1708326 Msa0229920:CDS
TGGCTAATGGTAGTCAGGTC+AGG 0.443018 2_2:-1703797 Msa0229920:three_prime_UTR
GGGTCGTACGGAATGTCAAA+AGG 0.443320 2_2:+1707689 None:intergenic
TACATCAAGTAGCCGTTTCT+GGG 0.444045 2_2:-1703545 Msa0229920:three_prime_UTR
TTCTGATAAGTTACATATGT+TGG 0.446498 2_2:-1706361 Msa0229920:CDS
TTGGAAGTTTATAAGCATCA+TGG 0.448475 2_2:-1704687 Msa0229920:CDS
ATTGGATATGTGACCTTTGT+TGG 0.451235 2_2:+1709536 None:intergenic
TCGGAAGTACCATGGGGTCT+TGG 0.451734 2_2:-1703817 Msa0229920:three_prime_UTR
ATGCCAGCATAAGATTCATC+AGG 0.456470 2_2:+1707767 None:intergenic
TTCTTCACCGGATGCTTCCA+TGG 0.459057 2_2:-1708245 Msa0229920:CDS
TCTAGTTTAGATACTTCATT+GGG 0.459929 2_2:+1706309 None:intergenic
AACTCCATCATTGGAAGTGC+CGG 0.461901 2_2:+1704821 None:intergenic
GAATCATTTGATGTATCAAC+CGG 0.461951 2_2:-1704075 Msa0229920:CDS
GCAAATTTGCAGCATGAAGA+TGG 0.462394 2_2:-1707014 Msa0229920:CDS
AGTGATCTTACTTCAAGAAC+TGG 0.465393 2_2:+1704381 None:intergenic
TAGCATGGGACCTTCAGTAT+TGG 0.467556 2_2:-1707570 Msa0229920:CDS
ATGGGAAAGCTCGGGGAGGC+GGG 0.467780 2_2:-1708384 Msa0229920:CDS
TTACTTCACTAGATTGCCTC+TGG 0.469192 2_2:+1707462 None:intergenic
AGAAGATGCTTCAGTCAAAC+TGG 0.472046 2_2:-1704130 Msa0229920:CDS
CTGACTTTCATCGTGATCAC+TGG 0.472410 2_2:+1705987 None:intergenic
GTCACAGAAGAGATCATAAC+GGG 0.472705 2_2:+1704762 None:intergenic
TGGGAACTTTGGAGCTTGAA+AGG 0.474478 2_2:-1707928 Msa0229920:CDS
CAGTGGGTGAACGGAATTCA+GGG 0.474870 2_2:+1704721 None:intergenic
AAAAGACTCACCAGAAATCA+AGG 0.475576 2_2:+1709416 None:intergenic
TCCAGATTCAAACTATCATC+TGG 0.477250 2_2:-1706385 Msa0229920:CDS
GTTGAGGCTGGTCATGGAAG+TGG 0.477400 2_2:-1707311 Msa0229920:CDS
GGAAGAAAATAAGTCGGAAA+AGG 0.477832 2_2:+1703520 None:intergenic
GATGAAGATATTGAAAATCA+TGG 0.478743 2_2:-1708067 Msa0229920:CDS
TCTAGCCTCGGAAGTACCAT+GGG 0.481018 2_2:-1703824 Msa0229920:three_prime_UTR
AGTTATCAAAGAGAAGGAGA+TGG 0.481171 2_2:-1709073 Msa0229920:exon
CGGGACAAATGAGCAGGCTG+TGG 0.481413 2_2:+1708169 None:intergenic
AAGTAAAAGGGGATGTAGAA+AGG 0.481574 2_2:-1708555 Msa0229920:CDS
ACGCATATTTCCGATCGAAC+AGG 0.482665 2_2:-1706118 Msa0229920:CDS
TTCCCTGATGAATCTTATGC+TGG 0.483195 2_2:-1707770 Msa0229920:CDS
CACCAGAAATCAAGGATATG+TGG 0.484640 2_2:+1709424 None:intergenic
TGGAAGTTTATAAGCATCAT+GGG 0.486241 2_2:-1704686 Msa0229920:CDS
CTGCTGCTCACATCAACACT+TGG 0.487065 2_2:+1707104 None:intergenic
TGAGAGGAAATTAAGTGAAC+GGG 0.487332 2_2:-1707381 Msa0229920:CDS
AGATGGAGCGGAACCAGGAA+TGG 0.488504 2_2:+1707733 None:intergenic
GGTGGGCTACAGTCATAAAC+TGG 0.488748 2_2:+1706864 None:intergenic
GTACAAGCCCAATGACAAAC+TGG 0.488800 2_2:-1706724 Msa0229920:CDS
CAGTGATCACGATGAAAGTC+AGG 0.489889 2_2:-1705986 Msa0229920:intron
GGTCTTGGCTAATGGTAGTC+AGG 0.491515 2_2:-1703802 Msa0229920:three_prime_UTR
ATTCATCAGGGAAATCAAAA+GGG 0.491906 2_2:+1707780 None:intergenic
AAGACGACTCTGAGGATTCA+GGG 0.492259 2_2:-1708285 Msa0229920:CDS
CAAAAGAATCTTATGGATCT+GGG 0.494568 2_2:-1707947 Msa0229920:CDS
TGAAGAGGAAGAAGCAATGG+AGG 0.496393 2_2:-1708020 Msa0229920:CDS
AGAATCGCTAGAGCTCGAAC+TGG 0.496607 2_2:+1703948 None:intergenic
TGATGAATCTTATGCTGGCA+TGG 0.497383 2_2:-1707765 Msa0229920:CDS
ATCTATATCTTCAGATTCCT+CGG 0.502074 2_2:+1706623 None:intergenic
ATCGACGAGCAATTCAATGA+TGG 0.502286 2_2:-1707149 Msa0229920:CDS
CTGGATATTGGATCAGAAAA+GGG 0.503752 2_2:-1706498 Msa0229920:CDS
TTCCGCATGCAGTTCGGAAG+AGG 0.504956 2_2:+1706665 None:intergenic
TTGTCAGAATTGGACACAGT+TGG 0.510706 2_2:-1704534 Msa0229920:CDS
TTCTAGCCTCGGAAGTACCA+TGG 0.510817 2_2:-1703825 Msa0229920:three_prime_UTR
TCTGCTCGTTTCTTCAGCAC+CGG 0.510877 2_2:+1704056 None:intergenic
TGTGGAGATGATAGAAGGTG+AGG 0.514980 2_2:-1707267 Msa0229920:CDS
CCTGCTCATTTGTCCCGTGA+TGG 0.517042 2_2:-1708163 Msa0229920:CDS
AGCAACATCAATATCTTCTA+GGG 0.518689 2_2:+1704206 None:intergenic
GATGCCGGCACTTCCAATGA+TGG 0.519296 2_2:-1704825 Msa0229920:CDS
GAATCTGTGGAGATGATAGA+AGG 0.519386 2_2:-1707272 Msa0229920:CDS
AAATTGAGAATGGGAAAGCT+CGG 0.520186 2_2:-1708393 Msa0229920:CDS
CCTGAATTCCGTTCACCCAC+TGG 0.522633 2_2:-1704720 Msa0229920:CDS
TCGACGAGCAATTCAATGAT+GGG 0.523338 2_2:-1707148 Msa0229920:CDS
AGAATAGATGGAGCGGAACC+AGG 0.523428 2_2:+1707728 None:intergenic
GCTTGAAAGGAACCGACGAT+TGG 0.523486 2_2:-1707915 Msa0229920:CDS
AAATGTGCCTGAGTTTGAAA+AGG 0.524184 2_2:-1708827 Msa0229920:CDS
GATGGCGTTTCTGTTGAGGC+TGG 0.525036 2_2:-1707323 Msa0229920:CDS
AATTGAGAATGGGAAAGCTC+GGG 0.526233 2_2:-1708392 Msa0229920:CDS
AGAAGATGGTGTTGATGAAG+AGG 0.527905 2_2:-1708035 Msa0229920:CDS
AATGGTGTTACCTTGCTCCC+TGG 0.528340 2_2:+1706074 None:intergenic
GTTATCAAAGAGAAGGAGAT+GGG 0.528740 2_2:-1709072 Msa0229920:exon
AACCCAAAAGAAATGGATGA+TGG 0.528957 2_2:+1708974 None:intergenic
TTTGAGTTTCTTTCTAGCCT+CGG 0.529291 2_2:-1703836 Msa0229920:three_prime_UTR
TTTCAGAATCAGCAGATATG+TGG 0.533463 2_2:+1706433 None:intergenic
TTTGGATGGCGTTTCTGTTG+AGG 0.534740 2_2:-1707327 Msa0229920:CDS
GGGACAAATGAGCAGGCTGT+GGG 0.535064 2_2:+1708170 None:intergenic
CCACCTCACCACTTATATGC+TGG 0.535587 2_2:+1706904 None:intergenic
TTTGACTTCCGCATGCAGTT+CGG 0.535820 2_2:+1706659 None:intergenic
CCGTTCACCCACTGGTGAAG+TGG 0.537813 2_2:-1704712 Msa0229920:CDS
TTGGAAAATGTATCCATTAG+CGG 0.538060 2_2:-1704018 Msa0229920:CDS
ATGTCAGCCATGGAAGCATC+CGG 0.539039 2_2:+1708238 None:intergenic
AGTAAAAGGGGATGTAGAAA+GGG 0.541286 2_2:-1708554 Msa0229920:CDS
TGATGAAGAGGAAGAAGCAA+TGG 0.542971 2_2:-1708023 Msa0229920:CDS
TACCAAATTGCTCACACTGA+AGG 0.543035 2_2:+1703688 None:intergenic
TACACAAGAGGCAACACTGT+TGG 0.543270 2_2:+1703641 None:intergenic
AAAGTAAATCTGCTATCAAG+TGG 0.543875 2_2:-1707982 Msa0229920:CDS
AGCTGATCCTTAATTGTACT+CGG 0.544183 2_2:+1704294 None:intergenic
AACTTAGTTCCTTCAGCAGA+GGG 0.545514 2_2:-1704627 Msa0229920:CDS
GTCAGAATTGGACACAGTTG+GGG 0.546519 2_2:-1704532 Msa0229920:CDS
GGCACTTCCAATGATGGAGT+TGG 0.547385 2_2:-1704819 Msa0229920:CDS
TGAAATAGTGCTCGGTGGAG+TGG 0.547719 2_2:-1707219 Msa0229920:CDS
CATTCTGGTAGAACCTTCAC+AGG 0.548522 2_2:-1704847 Msa0229920:CDS
AGAGAAACCTGATCTTAAAA+GGG 0.548661 2_2:-1707660 Msa0229920:CDS
GATGGAGCGGAACCAGGAAT+GGG 0.549049 2_2:+1707734 None:intergenic
CTATAAGACTTTCCAATCGT+CGG 0.549342 2_2:+1707903 None:intergenic
CTCTGAAGAAAATGAATCTG+TGG 0.550869 2_2:-1707285 Msa0229920:CDS
GAATTAACATCTAATTTGGA+TGG 0.554143 2_2:-1707341 Msa0229920:CDS
TCAAACTTCCAGCATATAAG+TGG 0.554512 2_2:-1706912 Msa0229920:CDS
AAGACTTTATCCTGTTCGAT+CGG 0.556191 2_2:+1706108 None:intergenic
GGTCGTACGGAATGTCAAAA+GGG 0.557243 2_2:+1707690 None:intergenic
ACCAAATTGCTCACACTGAA+GGG 0.557629 2_2:+1703689 None:intergenic
TTTGCTTTATGACTCTGCGC+TGG 0.557798 2_2:-1708614 Msa0229920:CDS
GGGAAGAGTTATCAAAGAGA+AGG 0.557918 2_2:-1709079 Msa0229920:five_prime_UTR
CCACTTCACCAGTGGGTGAA+CGG 0.558745 2_2:+1704712 None:intergenic
CATGGTGAAGCGGAAGAAGA+TGG 0.559187 2_2:-1708049 Msa0229920:CDS
TCACTTCTGATCGGTAGGAC+TGG 0.561391 2_2:+1707072 None:intergenic
AGATATAAGCTGTTCTGCTG+AGG 0.561512 2_2:+1706842 None:intergenic
ATCTGGCTTCAATGACTGGA+AGG 0.562067 2_2:+1704229 None:intergenic
AAGTCTTATAGCTAGGAGAA+TGG 0.562545 2_2:-1707891 Msa0229920:CDS
AAAATATCTGAAGATAATCA+AGG 0.563038 2_2:-1704177 Msa0229920:CDS
GACATGTAGCCCTCTGCTGA+AGG 0.566330 2_2:+1704618 None:intergenic
GATTGGAAAGTCTTATAGCT+AGG 0.566470 2_2:-1707898 Msa0229920:CDS
TTGTCAAGTTCCAGGGAGCA+AGG 0.566942 2_2:-1706084 Msa0229920:CDS
GATGAATCTTATGCTGGCAT+GGG 0.566948 2_2:-1707764 Msa0229920:CDS
GATTCTTATCCAGATCTTGG+TGG 0.568851 2_2:+1706049 None:intergenic
GATAGGAGTGAGGATGATCA+TGG 0.570111 2_2:-1708637 Msa0229920:CDS
CGTTGAAGAAGCGAGTTTGG+TGG 0.571323 2_2:-1708671 Msa0229920:CDS
GTTTCTGTTGAGGCTGGTCA+TGG 0.571762 2_2:-1707317 Msa0229920:CDS
TGCAGCATCAGAACCATCAC+GGG 0.572842 2_2:+1708150 None:intergenic
TTGGCTGCCCAAAACTGAGA+AGG 0.572888 2_2:+1708848 None:intergenic
AGTGGAAGATCCTTCTGAGA+TGG 0.573204 2_2:-1707201 Msa0229920:CDS
ACCAGAAATCAAGGATATGT+GGG 0.574125 2_2:+1709425 None:intergenic
TGAGGATTCAGGGTCTGATA+GGG 0.574773 2_2:-1708275 Msa0229920:CDS
GCATGGGACCTTCAGTATTG+GGG 0.575345 2_2:-1707568 Msa0229920:CDS
TCGGAAAAGGAACCCAGAAA+CGG 0.578020 2_2:+1703533 None:intergenic
AGCCTCTTCCGAACTGCATG+CGG 0.578260 2_2:-1706667 Msa0229920:CDS
GATCCTTAATTGTACTCGGA+AGG 0.578783 2_2:+1704298 None:intergenic
TTCATCTATGCATGCATTAG+GGG 0.579205 2_2:-1706199 Msa0229920:CDS
CCATCACGGGACAAATGAGC+AGG 0.579312 2_2:+1708163 None:intergenic
TGTGTTTGTATCTGAAAGGA+TGG 0.579824 2_2:-1707507 Msa0229920:CDS
AACTTCAACCCAAACTTCAG+TGG 0.580356 2_2:-1706973 Msa0229920:CDS
GTCGTCACTTGAAACAACTT+CGG 0.580846 2_2:+1708474 None:intergenic
AGTCTTGTTGTCAAGTTCCA+GGG 0.580870 2_2:-1706091 Msa0229920:CDS
ATCTGAAAGGATGGTTTCGG+AGG 0.582768 2_2:-1707498 Msa0229920:CDS
AAACTGGAAGCAAATGAAGA+TGG 0.582852 2_2:-1704114 Msa0229920:CDS
GGGGCATCTACATCTAAAAG+TGG 0.584034 2_2:+1708190 None:intergenic
ATGAGAGGAAATTAAGTGAA+CGG 0.584291 2_2:-1707382 Msa0229920:CDS
ATGTCAAAAGGGTTTCGTCT+AGG 0.585205 2_2:+1707701 None:intergenic
GAAATAGGCGCAACATTAGA+GGG 0.585354 2_2:+1707815 None:intergenic
GGATAAAATTCCATCTCAGA+AGG 0.586560 2_2:+1707191 None:intergenic
GTAGAACCTTCACAGGATGC+CGG 0.587219 2_2:-1704840 Msa0229920:CDS
AAAACTGTTCTTATGCAAAG+AGG 0.590201 2_2:+1703499 None:intergenic
GGGTTTGATTCATTTAAGGA+AGG 0.590242 2_2:-1708364 Msa0229920:CDS
GAAGAGGAAGAAGCAATGGA+GGG 0.590317 2_2:-1708019 Msa0229920:CDS
CATTGGAATGATGTCAGCCA+TGG 0.593113 2_2:+1708228 None:intergenic
ATAAGCTGTTCTGCTGAGGG+TGG 0.593673 2_2:+1706846 None:intergenic
GAATGTATGTGTTATGACAT+TGG 0.593928 2_2:+1709518 None:intergenic
GATATAAGCTGTTCTGCTGA+GGG 0.595064 2_2:+1706843 None:intergenic
TGGCTGCCCAAAACTGAGAA+GGG 0.598305 2_2:+1708849 None:intergenic
AGTCACAGAAGAGATCATAA+CGG 0.600400 2_2:+1704761 None:intergenic
CAGTCATAAACTGGTACCAG+TGG 0.600828 2_2:+1706873 None:intergenic
TTCCAAATCCACTTCACCAG+TGG 0.601007 2_2:+1704704 None:intergenic
GGGTGGAGCTCATCAAGCAT+TGG 0.602110 2_2:+1708211 None:intergenic
ACCCGTTTCCAAGATGAACT+GGG 0.603293 2_2:+1708325 None:intergenic
CTCATCTCTATCAGAAACAA+TGG 0.603541 2_2:+1708747 None:intergenic
AGGGCAAGGAAGTTCATGAC+GGG 0.603681 2_2:-1708507 Msa0229920:CDS
GTCAATCACTTCTGATCGGT+AGG 0.604561 2_2:+1707067 None:intergenic
TGATCAAAATAGACCTGCAA+GGG 0.604933 2_2:-1706550 Msa0229920:CDS
TCGCTCAAAATGACTTCTCT+CGG 0.605152 2_2:+1703917 None:intergenic
TTGAAACAACTTCGGATGTG+AGG 0.605383 2_2:+1708482 None:intergenic
TCCAAATCCACTTCACCAGT+GGG 0.608186 2_2:+1704705 None:intergenic
TTGATCAAAATAGACCTGCA+AGG 0.609906 2_2:-1706551 Msa0229920:CDS
TATTGAAAATCATGGTGAAG+CGG 0.609946 2_2:-1708059 Msa0229920:CDS
AGTCGATACTACTGCTGATG+TGG 0.610438 2_2:-1706757 Msa0229920:CDS
GTAGTATCGACTGAGACAGT+AGG 0.610894 2_2:+1706768 None:intergenic
TACCATTAGCCAAGACCCCA+TGG 0.612002 2_2:+1703808 None:intergenic
AGATGAAATGCCAGATTCCG+TGG 0.613020 2_2:-1706253 Msa0229920:CDS
TAAGCTGTTCTGCTGAGGGT+GGG 0.613443 2_2:+1706847 None:intergenic
AAACTTAGTTCCTTCAGCAG+AGG 0.613845 2_2:-1704628 Msa0229920:CDS
GAAGTGCCGGCATCCTGTGA+AGG 0.614416 2_2:+1704834 None:intergenic
CAGTTCATCTTGGAAACGGG+TGG 0.614416 2_2:-1708323 Msa0229920:CDS
CCAGCATATAAGTGGTGAGG+TGG 0.614631 2_2:-1706904 Msa0229920:CDS
GAGGAAGAAGCAATGGAGGG+TGG 0.617795 2_2:-1708016 Msa0229920:CDS
CAAAGAGGAAGAAAATAAGT+CGG 0.617796 2_2:+1703514 None:intergenic
AGAAGTGATATTGAAGAGAG+TGG 0.618500 2_2:-1708694 Msa0229920:CDS
GTTGAAGAAGCGAGTTTGGT+GGG 0.618570 2_2:-1708670 Msa0229920:CDS
TTAGATATCCCCAATACTGA+AGG 0.622720 2_2:+1707560 None:intergenic
GTGATGAGAATCAGAAGCCA+CGG 0.622990 2_2:+1706236 None:intergenic
TTCAACCCGAACTTCAGTCG+AGG 0.624715 2_2:-1706937 Msa0229920:CDS
ATGCAGCATCAGAACCATCA+CGG 0.624845 2_2:+1708149 None:intergenic
CGCAACATTAGAGGGAACAT+CGG 0.628270 2_2:+1707823 None:intergenic
TCAACTTAGTTCACTGCCTG+AGG 0.630538 2_2:-1704442 Msa0229920:CDS
GGAGCGGAACCAGGAATGGG+TGG 0.630834 2_2:+1707737 None:intergenic
TTCAACCCAAACTTCAGTGG+AGG 0.630846 2_2:-1706970 Msa0229920:CDS
CGACGAGCAATTCAATGATG+GGG 0.631025 2_2:-1707147 Msa0229920:CDS
TATTGAGAAACAGTATGTCA+TGG 0.631572 2_2:-1708446 Msa0229920:CDS
AGTCATAAACTGGTACCAGT+GGG 0.632600 2_2:+1706874 None:intergenic
TCAGTACAATGTTACTGCAG+AGG 0.633692 2_2:-1706601 Msa0229920:CDS
GAAACGAGCAGAACTCCAGT+TGG 0.634788 2_2:-1704045 Msa0229920:CDS
GTTCAGGTGATCAGGATGAG+AGG 0.634982 2_2:-1707397 Msa0229920:CDS
GCATGAGAACGAAGTAAAAG+GGG 0.635965 2_2:-1708566 Msa0229920:CDS
TAGGGCGGAGAGTTCTTCAC+CGG 0.636324 2_2:-1708257 Msa0229920:CDS
GGGCATCTACATCTAAAAGT+GGG 0.637297 2_2:+1708191 None:intergenic
GATTGACGACATACCTGATG+AGG 0.638457 2_2:-1707051 Msa0229920:CDS
TGTTGCTGAATCAGAAGACA+AGG 0.639181 2_2:+1706812 None:intergenic
AGCAATGGAGGGTGGCCAAG+AGG 0.641559 2_2:-1708008 Msa0229920:CDS
CATCTACATCTAAAAGTGGG+TGG 0.644161 2_2:+1708194 None:intergenic
GCACTATTTCATCTTCATCA+CGG 0.645125 2_2:+1707231 None:intergenic
TGTCGTCAATCACTTCTGAT+CGG 0.645572 2_2:+1707063 None:intergenic
TCTGAAAGGATGGTTTCGGA+GGG 0.646637 2_2:-1707497 Msa0229920:CDS
ATCCTTTCAGATACAAACAC+AGG 0.649789 2_2:+1707509 None:intergenic
TGTTAAAGATGATAGGAGTG+AGG 0.651600 2_2:-1708647 Msa0229920:CDS
TGCCAGCATAAGATTCATCA+GGG 0.652519 2_2:+1707768 None:intergenic
AAGGAAGAGAGAGTTACTCA+TGG 0.654060 2_2:-1708808 Msa0229920:CDS
GGAAGTTTATAAGCATCATG+GGG 0.655001 2_2:-1704685 Msa0229920:CDS
CACTGATGAAGACGACTCTG+AGG 0.655307 2_2:-1708293 Msa0229920:CDS
AGCCTGTGTTTGTATCTGAA+AGG 0.656712 2_2:-1707511 Msa0229920:CDS
CTTCCAGCATATAAGTGGTG+AGG 0.659771 2_2:-1706907 Msa0229920:CDS
TGATGAATCTAGAGATCACG+TGG 0.660170 2_2:-1704265 Msa0229920:CDS
TATGTTGGATAATGAGTCTG+TGG 0.662664 2_2:-1706346 Msa0229920:CDS
AAGGGCAAGGAAGTTCATGA+CGG 0.664816 2_2:-1708508 Msa0229920:CDS
GGATTCAGGGTCTGATAGGG+CGG 0.669574 2_2:-1708272 Msa0229920:CDS
ATCTGCTATCAAGTGGACAG+AGG 0.673753 2_2:-1707975 Msa0229920:CDS
AGGCTGTAGAATAGATGGAG+CGG 0.674409 2_2:+1707721 None:intergenic
TGGGGATATCTAAGCAAGAG+AGG 0.674635 2_2:-1707550 Msa0229920:CDS
GAGAATGGGAAAGCTCGGGG+AGG 0.676413 2_2:-1708388 Msa0229920:CDS
AAGACCCCATGGTACTTCCG+AGG 0.676543 2_2:+1703819 None:intergenic
ATTGAGAATGGGAAAGCTCG+GGG 0.677593 2_2:-1708391 Msa0229920:CDS
AATGCTTCATCAAGACAATG+TGG 0.677719 2_2:-1706412 Msa0229920:CDS
GGACAAATGAGCAGGCTGTG+GGG 0.684535 2_2:+1708171 None:intergenic
TTATAGCTAGGAGAATGGCA+AGG 0.684879 2_2:-1707886 Msa0229920:CDS
TGAGGTGGAAGAGACCCCAC+TGG 0.690480 2_2:-1706889 Msa0229920:CDS
AGGGAACAAGCTATTTCCAG+AGG 0.691282 2_2:-1707478 Msa0229920:CDS
TTATATGAAGGATATTGACG+AGG 0.699799 2_2:-1704562 Msa0229920:CDS
GTTGGATAATGAGTCTGTGG+AGG 0.700744 2_2:-1706343 Msa0229920:CDS
GATGAAGATGAAATAGTGCT+CGG 0.703578 2_2:-1707227 Msa0229920:CDS
AGTGGGTGAACGGAATTCAG+GGG 0.711324 2_2:+1704722 None:intergenic
GTCATAAACTGGTACCAGTG+GGG 0.715616 2_2:+1706875 None:intergenic
CAAGCCCAATGACAAACTGG+AGG 0.720413 2_2:-1706721 Msa0229920:CDS
CTAGCCTCGGAAGTACCATG+GGG 0.726729 2_2:-1703823 Msa0229920:three_prime_UTR
GAAGATGAAATAGTGCTCGG+TGG 0.744614 2_2:-1707224 Msa0229920:CDS

CRISPR-GE

badsite warning sgRNA_sequence Strand Position Region GC_content
!! AAGAAAAAGAAAAAAAATTA+TGG - chr2_2:1707414-1707433 Msa0229920:CDS 10.0%
!! CTAATATATTTAAATCTATA+TGG - chr2_2:1707633-1707652 Msa0229920:CDS 10.0%
!! TTATAATTTGATTATAGAAA+TGG - chr2_2:1709564-1709583 Msa0229920:five_prime_UTR 10.0%
!!! TCTATGTATATTTTTTTGTT+TGG + chr2_2:1703693-1703712 None:intergenic 15.0%
!!! TCTAATTTTTATTTGATTTC+AGG - chr2_2:1703841-1703860 Msa0229920:three_prime_UTR 15.0%
!!! CTAATTTTTATTTGATTTCA+GGG - chr2_2:1703842-1703861 Msa0229920:three_prime_UTR 15.0%
!!! ATATTTTTGAAATTGAGAAT+GGG - chr2_2:1704752-1704771 Msa0229920:CDS 15.0%
!! AAACATTAATCTCTATTTAT+AGG - chr2_2:1707477-1707496 Msa0229920:CDS 15.0%
!!! TTGAAATTTTCTTCATTATT+CGG + chr2_2:1708563-1708582 None:intergenic 15.0%
!! TATACATAGAAAAAAAACAG+AGG - chr2_2:1703703-1703722 Msa0229920:three_prime_UTR 20.0%
!! ATAATCGATTATGGAATAAA+GGG + chr2_2:1703788-1703807 None:intergenic 20.0%
!!! TTAGCTTTTATTTCCTTTTA+TGG - chr2_2:1703965-1703984 Msa0229920:CDS 20.0%
!!! GATATTTTTGAAATTGAGAA+TGG - chr2_2:1704751-1704770 Msa0229920:CDS 20.0%
!!! ATCAAAAAGATGCATTTTTT+CGG - chr2_2:1705547-1705566 Msa0229920:intron 20.0%
!!! ATGATAATGATTGAGTAATA+TGG - chr2_2:1707549-1707568 Msa0229920:CDS 20.0%
!! ATTTAAATCTATATGGAATC+TGG - chr2_2:1707640-1707659 Msa0229920:CDS 20.0%
!! AATGAAAGAACAAATTATTC+CGG + chr2_2:1708153-1708172 None:intergenic 20.0%
!!! AATTTATGATCAGTTCTTTT+TGG + chr2_2:1708260-1708279 None:intergenic 20.0%
!! CAATGAATTTGATTATATGA+AGG - chr2_2:1708580-1708599 Msa0229920:CDS 20.0%
!! AAAATATCTGAAGATAATCA+AGG - chr2_2:1708977-1708996 Msa0229920:CDS 20.0%
!! TAAATAAGACAAAACTCTTT+CGG + chr2_2:1709264-1709283 None:intergenic 20.0%
!!! TTGTTTTGAGTTTTTTTCTT+CGG - chr2_2:1709286-1709305 Msa0229920:five_prime_UTR 20.0%
!!! TTTCTATAATTTTGATGGAT+TGG - chr2_2:1709380-1709399 Msa0229920:intron 20.0%
!! AGCAATTTGGTATATATATA+GGG - chr2_2:1709477-1709496 Msa0229920:five_prime_UTR 20.0%
!!! ACAAAAAATCCAATTTCTTT+TGG + chr2_2:1709541-1709560 None:intergenic 20.0%
! CATAATCGATTATGGAATAA+AGG + chr2_2:1703789-1703808 None:intergenic 25.0%
!!! TTTTATTTGATTTCAGGGAT+TGG - chr2_2:1703847-1703866 Msa0229920:three_prime_UTR 25.0%
!!! TGTCATTCATTTTGATTCAT+TGG - chr2_2:1703889-1703908 Msa0229920:three_prime_UTR 25.0%
! ATCATCAATAGTTCCATAAA+AGG + chr2_2:1703981-1704000 None:intergenic 25.0%
!! TTTTATGGAACTATTGATGA+TGG - chr2_2:1703980-1703999 Msa0229920:CDS 25.0%
! ATCAACCATAAACAAACAAA+AGG + chr2_2:1704030-1704049 None:intergenic 25.0%
!!! AAAAAACAGGTTTTAGCTAA+GGG - chr2_2:1704055-1704074 Msa0229920:CDS 25.0%
! TTGAAATTGGAATCAAAGTT+AGG - chr2_2:1704113-1704132 Msa0229920:CDS 25.0%
!!! TTTGTTTTCATTTCAATCAG+AGG - chr2_2:1704139-1704158 Msa0229920:CDS 25.0%
!! TTGTTTTCATTTCAATCAGA+GGG - chr2_2:1704140-1704159 Msa0229920:CDS 25.0%
!!! TCCTTTTTTGTTTTCTGTTT+TGG - chr2_2:1704237-1704256 Msa0229920:CDS 25.0%
! ACCAAAACAGAAAACAAAAA+AGG + chr2_2:1704241-1704260 None:intergenic 25.0%
!!! GAATTACATAGTTTTGACTT+AGG - chr2_2:1704622-1704641 Msa0229920:CDS 25.0%
! GATGAAGATATTGAAAATCA+TGG - chr2_2:1705087-1705106 Msa0229920:intron 25.0%
! GACTGAATTAACATCTAATT+TGG - chr2_2:1705809-1705828 Msa0229920:intron 25.0%
! GAATTAACATCTAATTTGGA+TGG - chr2_2:1705813-1705832 Msa0229920:intron 25.0%
!!! CTATTTTGATCAACAAAACT+TGG + chr2_2:1706596-1706615 None:intergenic 25.0%
! TTCTGATAAGTTACATATGT+TGG - chr2_2:1706793-1706812 Msa0229920:CDS 25.0%
!! TCTAGTTTAGATACTTCATT+GGG + chr2_2:1706848-1706867 None:intergenic 25.0%
!! ATCTAGTTTAGATACTTCAT+TGG + chr2_2:1706849-1706868 None:intergenic 25.0%
! CAGAACATTTAGAGAAAAAT+TGG - chr2_2:1707002-1707021 Msa0229920:CDS 25.0%
!! TTTAAGGTTCCATATGATTA+AGG - chr2_2:1707226-1707245 Msa0229920:CDS 25.0%
!! TGTGATTTTCCTTAATCATA+TGG + chr2_2:1707238-1707257 None:intergenic 25.0%
! TCAACAAGAATATTATCAGT+AGG + chr2_2:1707362-1707381 None:intergenic 25.0%
!! GAGATTAATGTTTACTCTTT+TGG + chr2_2:1707470-1707489 None:intergenic 25.0%
! AGATACATAAGATTAGAAAC+TGG - chr2_2:1707596-1707615 Msa0229920:CDS 25.0%
! CAATACAGTTGCAATATTAA+TGG + chr2_2:1707736-1707755 None:intergenic 25.0%
! CATTAATATTGCAACTGTAT+TGG - chr2_2:1707734-1707753 Msa0229920:CDS 25.0%
! CTTGAAAAATGTTCATTCAT+TGG + chr2_2:1707787-1707806 None:intergenic 25.0%
! AAAGATCAAGAAAAGACAAA+GGG + chr2_2:1707814-1707833 None:intergenic 25.0%
! AAAAGATCAAGAAAAGACAA+AGG + chr2_2:1707815-1707834 None:intergenic 25.0%
! AGATAGGTTGTTCTTTAATT+TGG - chr2_2:1707929-1707948 Msa0229920:CDS 25.0%
! TATTTGCTTGATTCATCTTT+CGG + chr2_2:1707995-1708014 None:intergenic 25.0%
!! TCAGGTTTCTATAATTTTGA+TGG - chr2_2:1709375-1709394 Msa0229920:intron 25.0%
! GAGCAATTTGGTATATATAT+AGG - chr2_2:1709476-1709495 Msa0229920:five_prime_UTR 25.0%
! TTTGAAAAAAGAGAGAGTGT+GGG + chr2_2:1703598-1703617 None:intergenic 30.0%
!!! CTCTTTTTTCAAACCAACAA+AGG - chr2_2:1703605-1703624 Msa0229920:three_prime_UTR 30.0%
GAATGTATGTGTTATGACAT+TGG + chr2_2:1703639-1703658 None:intergenic 30.0%
GATCATAGCATAATCGATTA+TGG + chr2_2:1703797-1703816 None:intergenic 30.0%
!!! ATTTTGATTCATTGGTGTTG+AGG - chr2_2:1703897-1703916 Msa0229920:three_prime_UTR 30.0%
!! GGTATCCTTTTGTTTGTTTA+TGG - chr2_2:1704022-1704041 Msa0229920:CDS 30.0%
!! TGGTTGATGAATCAAAAAAC+AGG - chr2_2:1704042-1704061 Msa0229920:CDS 30.0%
!!! CAAAAAACAGGTTTTAGCTA+AGG - chr2_2:1704054-1704073 Msa0229920:CDS 30.0%
! TGTTTTCATTTCAATCAGAG+GGG - chr2_2:1704141-1704160 Msa0229920:CDS 30.0%
CCTAAAAAACCCAAAAGAAA+TGG + chr2_2:1704190-1704209 None:intergenic 30.0%
!!! CCATTTCTTTTGGGTTTTTT+AGG - chr2_2:1704187-1704206 Msa0229920:CDS 30.0%
!!! ACATAGTTTTGACTTAGGAA+AGG - chr2_2:1704627-1704646 Msa0229920:CDS 30.0%
!!! CATAGTTTTGACTTAGGAAA+GGG - chr2_2:1704628-1704647 Msa0229920:CDS 30.0%
TATTGAGAAACAGTATGTCA+TGG - chr2_2:1704708-1704727 Msa0229920:CDS 30.0%
TATTGAAAATCATGGTGAAG+CGG - chr2_2:1705095-1705114 Msa0229920:intron 30.0%
AAAGTAAATCTGCTATCAAG+TGG - chr2_2:1705172-1705191 Msa0229920:intron 30.0%
CAAAAGAATCTTATGGATCT+GGG - chr2_2:1705207-1705226 Msa0229920:intron 30.0%
ATTCATCAGGGAAATCAAAA+GGG + chr2_2:1705377-1705396 None:intergenic 30.0%
AAGAGAAACCTGATCTTAAA+AGG - chr2_2:1705493-1705512 Msa0229920:intron 30.0%
AGAGAAACCTGATCTTAAAA+GGG - chr2_2:1705494-1705513 Msa0229920:intron 30.0%
!!! AAAAAGATGCATTTTTTCGG+AGG - chr2_2:1705550-1705569 Msa0229920:intron 30.0%
! AAGAGAGGCATGATATTAAT+TGG - chr2_2:1705619-1705638 Msa0229920:intron 30.0%
ATGAGAGGAAATTAAGTGAA+CGG - chr2_2:1705772-1705791 Msa0229920:intron 30.0%
TTAGATGTTAATTCAGTCTC+TGG + chr2_2:1705807-1705826 None:intergenic 30.0%
ATCTATATCTTCAGATTCCT+CGG + chr2_2:1706534-1706553 None:intergenic 30.0%
TGCATAGATGAACTATTAGA+AGG + chr2_2:1706947-1706966 None:intergenic 30.0%
!! TCTAAATGTTCTGTTTCTAC+TGG + chr2_2:1706995-1707014 None:intergenic 30.0%
! CTTGAACTTCTTTTGCTTTA+AGG - chr2_2:1707210-1707229 Msa0229920:CDS 30.0%
TGCTTGGGTTAAAAAAGAAT+AGG + chr2_2:1707314-1707333 None:intergenic 30.0%
!!! TCTTTTTTAACCCAAGCAAT+TGG - chr2_2:1707316-1707335 Msa0229920:CDS 30.0%
ACAAGAATATTATCAGTAGG+AGG + chr2_2:1707359-1707378 None:intergenic 30.0%
! TTCTTGTTGAAGTTGAGTTT+TGG - chr2_2:1707372-1707391 Msa0229920:CDS 30.0%
ACTCCTAATCCTAAATTAGT+AGG - chr2_2:1707508-1707527 Msa0229920:CDS 30.0%
CTCCTAATCCTAAATTAGTA+GGG - chr2_2:1707509-1707528 Msa0229920:CDS 30.0%
! TTCCCTACTAATTTAGGATT+AGG + chr2_2:1707514-1707533 None:intergenic 30.0%
TCCTAAATTAGTAGGGAAAT+CGG - chr2_2:1707516-1707535 Msa0229920:CDS 30.0%
TCATTGGAAATCAAAATCTG+AGG + chr2_2:1707771-1707790 None:intergenic 30.0%
ATAATAACAGAAAACACAGC+TGG + chr2_2:1708106-1708125 None:intergenic 30.0%
TTGGAAGTTTATAAGCATCA+TGG - chr2_2:1708467-1708486 Msa0229920:CDS 30.0%
TGGAAGTTTATAAGCATCAT+GGG - chr2_2:1708468-1708487 Msa0229920:CDS 30.0%
!!! AGTTTTGTTGTGCTTCATTT+TGG + chr2_2:1708511-1708530 None:intergenic 30.0%
TTATATGAAGGATATTGACG+AGG - chr2_2:1708592-1708611 Msa0229920:CDS 30.0%
AGCAACATCAATATCTTCTA+GGG + chr2_2:1708951-1708970 None:intergenic 30.0%
AAGCAACATCAATATCTTCT+AGG + chr2_2:1708952-1708971 None:intergenic 30.0%
GAATCATTTGATGTATCAAC+CGG - chr2_2:1709079-1709098 Msa0229920:five_prime_UTR 30.0%
! ACATTTTCCAATTTACCAAC+TGG + chr2_2:1709127-1709146 None:intergenic 30.0%
TTGGAAAATGTATCCATTAG+CGG - chr2_2:1709136-1709155 Msa0229920:intron 30.0%
ATAAGGAAAAATCTCACAGT+AGG - chr2_2:1709167-1709186 Msa0229920:intron 30.0%
!!! TGAGTTTTTTTCTTCGGAAA+TGG - chr2_2:1709292-1709311 Msa0229920:five_prime_UTR 30.0%
!!! GAGTTTTTTTCTTCGGAAAT+GGG - chr2_2:1709293-1709312 Msa0229920:five_prime_UTR 30.0%
! GTTTCTTCAAGAATGAGTTT+TGG - chr2_2:1709402-1709421 Msa0229920:intron 30.0%
TTGTGTAGTCCAAAAGAAAT+TGG - chr2_2:1709529-1709548 Msa0229920:five_prime_UTR 30.0%
CAAAGAGGAAGAAAATAAGT+CGG + chr2_2:1709643-1709662 None:intergenic 30.0%
! TTGAAAAAAGAGAGAGTGTG+GGG + chr2_2:1703597-1703616 None:intergenic 35.0%
GTTTGAAAAAAGAGAGAGTG+TGG + chr2_2:1703599-1703618 None:intergenic 35.0%
ATTGGATATGTGACCTTTGT+TGG + chr2_2:1703621-1703640 None:intergenic 35.0%
ACCAGAAATCAAGGATATGT+GGG + chr2_2:1703732-1703751 None:intergenic 35.0%
AAAAGACTCACCAGAAATCA+AGG + chr2_2:1703741-1703760 None:intergenic 35.0%
TAAAGGGTCATCAAACATGA+AGG + chr2_2:1703772-1703791 None:intergenic 35.0%
!! AACTATTGATGATGGATCAC+TGG - chr2_2:1703988-1704007 Msa0229920:CDS 35.0%
!! TGGATCACTGGATCTTATTT+TGG - chr2_2:1704000-1704019 Msa0229920:CDS 35.0%
!!! GGATCACTGGATCTTATTTT+GGG - chr2_2:1704001-1704020 Msa0229920:CDS 35.0%
AGTTATCAAAGAGAAGGAGA+TGG - chr2_2:1704081-1704100 Msa0229920:CDS 35.0%
GTTATCAAAGAGAAGGAGAT+GGG - chr2_2:1704082-1704101 Msa0229920:CDS 35.0%
ATGGGATCAGTGATTGAAAT+TGG - chr2_2:1704100-1704119 Msa0229920:CDS 35.0%
! TTGCCATCATCCATTTCTTT+TGG - chr2_2:1704177-1704196 Msa0229920:CDS 35.0%
! TGCCATCATCCATTTCTTTT+GGG - chr2_2:1704178-1704197 Msa0229920:CDS 35.0%
AACCCAAAAGAAATGGATGA+TGG + chr2_2:1704183-1704202 None:intergenic 35.0%
! TTTTCAAACTCAGGCACATT+TGG + chr2_2:1704328-1704347 None:intergenic 35.0%
AAATGTGCCTGAGTTTGAAA+AGG - chr2_2:1704327-1704346 Msa0229920:CDS 35.0%
! GTCGTTTCAAACTGGATTTT+CGG - chr2_2:1704375-1704394 Msa0229920:CDS 35.0%
! TTTCAAACTGGATTTTCGGA+GGG - chr2_2:1704379-1704398 Msa0229920:CDS 35.0%
CTCATCTCTATCAGAAACAA+TGG + chr2_2:1704410-1704429 None:intergenic 35.0%
AGAAGTGATATTGAAGAGAG+TGG - chr2_2:1704460-1704479 Msa0229920:CDS 35.0%
TGTTAAAGATGATAGGAGTG+AGG - chr2_2:1704507-1704526 Msa0229920:CDS 35.0%
AGCATGAGAACGAAGTAAAA+GGG - chr2_2:1704587-1704606 Msa0229920:CDS 35.0%
AAGTAAAAGGGGATGTAGAA+AGG - chr2_2:1704599-1704618 Msa0229920:CDS 35.0%
AGTAAAAGGGGATGTAGAAA+GGG - chr2_2:1704600-1704619 Msa0229920:CDS 35.0%
AAATTGAGAATGGGAAAGCT+CGG - chr2_2:1704761-1704780 Msa0229920:CDS 35.0%
GGGTTTGATTCATTTAAGGA+AGG - chr2_2:1704790-1704809 Msa0229920:CDS 35.0%
CAGATTTACTTTCATCCTCT+TGG + chr2_2:1705164-1705183 None:intergenic 35.0%
GGATGACCAAAAGAATCTTA+TGG - chr2_2:1705200-1705219 Msa0229920:intron 35.0%
! CCAGATCCATAAGATTCTTT+TGG + chr2_2:1705209-1705228 None:intergenic 35.0%
CCAAAAGAATCTTATGGATC+TGG - chr2_2:1705206-1705225 Msa0229920:intron 35.0%
CTATAAGACTTTCCAATCGT+CGG + chr2_2:1705254-1705273 None:intergenic 35.0%
! GATTGGAAAGTCTTATAGCT+AGG - chr2_2:1705256-1705275 Msa0229920:intron 35.0%
! AAGTCTTATAGCTAGGAGAA+TGG - chr2_2:1705263-1705282 Msa0229920:intron 35.0%
GATTCATCAGGGAAATCAAA+AGG + chr2_2:1705378-1705397 None:intergenic 35.0%
GATCAGGTTTCTCTTCATTT+GGG + chr2_2:1705488-1705507 None:intergenic 35.0%
AGATCAGGTTTCTCTTCATT+TGG + chr2_2:1705489-1705508 None:intergenic 35.0%
!!! AAACTGTCCCTTTTAAGATC+AGG + chr2_2:1705504-1705523 None:intergenic 35.0%
!! AGGCATGAAAGTTTTAGCAT+GGG - chr2_2:1705570-1705589 Msa0229920:intron 35.0%
TTAGATATCCCCAATACTGA+AGG + chr2_2:1705597-1705616 None:intergenic 35.0%
ATCCTTTCAGATACAAACAC+AGG + chr2_2:1705648-1705667 None:intergenic 35.0%
TGTGTTTGTATCTGAAAGGA+TGG - chr2_2:1705647-1705666 Msa0229920:intron 35.0%
TGTATCTGAAAGGATGGTTT+CGG - chr2_2:1705653-1705672 Msa0229920:intron 35.0%
TGAGAGGAAATTAAGTGAAC+GGG - chr2_2:1705773-1705792 Msa0229920:intron 35.0%
! CACAGATTCATTTTCTTCAG+AGG + chr2_2:1705871-1705890 None:intergenic 35.0%
! CTCTGAAGAAAATGAATCTG+TGG - chr2_2:1705869-1705888 Msa0229920:intron 35.0%
GCACTATTTCATCTTCATCA+CGG + chr2_2:1705926-1705945 None:intergenic 35.0%
GATGAAGATGAAATAGTGCT+CGG - chr2_2:1705927-1705946 Msa0229920:intron 35.0%
GGATAAAATTCCATCTCAGA+AGG + chr2_2:1705966-1705985 None:intergenic 35.0%
! ATGGAATTTTATCCTGCAAC+AGG - chr2_2:1705972-1705991 Msa0229920:intron 35.0%
!!! GTTTTTTCTGATTCCTCATC+AGG + chr2_2:1706119-1706138 None:intergenic 35.0%
TCAAACTTCCAGCATATAAG+TGG - chr2_2:1706242-1706261 Msa0229920:CDS 35.0%
TTATCCTCCAGTTTGTCATT+GGG + chr2_2:1706440-1706459 None:intergenic 35.0%
ATTATCCTCCAGTTTGTCAT+TGG + chr2_2:1706441-1706460 None:intergenic 35.0%
CGGAAGTCAAAAATGAAATG+AGG - chr2_2:1706507-1706526 Msa0229920:CDS 35.0%
TTGATCAAAATAGACCTGCA+AGG - chr2_2:1706603-1706622 Msa0229920:CDS 35.0%
TGATCAAAATAGACCTGCAA+GGG - chr2_2:1706604-1706623 Msa0229920:CDS 35.0%
! TCCAACTTTTCTCTGGATAT+TGG - chr2_2:1706644-1706663 Msa0229920:CDS 35.0%
TCCAATATCCAGAGAAAAGT+TGG + chr2_2:1706648-1706667 None:intergenic 35.0%
TCTGGATATTGGATCAGAAA+AGG - chr2_2:1706655-1706674 Msa0229920:CDS 35.0%
CTGGATATTGGATCAGAAAA+GGG - chr2_2:1706656-1706675 Msa0229920:CDS 35.0%
! TTCAGGTTTGTTTCATGAAC+AGG - chr2_2:1706688-1706707 Msa0229920:CDS 35.0%
TTTCAGAATCAGCAGATATG+TGG + chr2_2:1706724-1706743 None:intergenic 35.0%
AATGCTTCATCAAGACAATG+TGG - chr2_2:1706742-1706761 Msa0229920:CDS 35.0%
TCCAGATTCAAACTATCATC+TGG - chr2_2:1706769-1706788 Msa0229920:CDS 35.0%
TATGTTGGATAATGAGTCTG+TGG - chr2_2:1706808-1706827 Msa0229920:CDS 35.0%
AGTTCATCTATGCATGCATT+AGG - chr2_2:1706953-1706972 Msa0229920:CDS 35.0%
GTTCATCTATGCATGCATTA+GGG - chr2_2:1706954-1706973 Msa0229920:CDS 35.0%
TTCATCTATGCATGCATTAG+GGG - chr2_2:1706955-1706974 Msa0229920:CDS 35.0%
AAGACTTTATCCTGTTCGAT+CGG + chr2_2:1707049-1707068 None:intergenic 35.0%
GATGATTCTTATCCAGATCT+TGG + chr2_2:1707111-1707130 None:intergenic 35.0%
! TCTGTCAAGCTCTGATAAAT+TGG - chr2_2:1707129-1707148 Msa0229920:CDS 35.0%
! ACCGATTTCCCTACTAATTT+AGG + chr2_2:1707520-1707539 None:intergenic 35.0%
TAATATGGAAACTGATCCTG+CGG - chr2_2:1707564-1707583 Msa0229920:CDS 35.0%
! TAAGATTAGAAACTGGTCTG+AGG - chr2_2:1707603-1707622 Msa0229920:CDS 35.0%
CCTATTGAATTGGGATTTCT+GGG + chr2_2:1707901-1707920 None:intergenic 35.0%
! TGATGCTAGCCTATTGAATT+GGG + chr2_2:1707910-1707929 None:intergenic 35.0%
AGCAAATAGATGTCAAACAG+AGG - chr2_2:1708007-1708026 Msa0229920:CDS 35.0%
! CATGCACATGATTGATAATC+CGG - chr2_2:1708131-1708150 Msa0229920:CDS 35.0%
!! CATTTGTTTGGTGTAAAGTG+AGG - chr2_2:1708208-1708227 Msa0229920:CDS 35.0%
GCAGAATTCTGATAACATTC+TGG - chr2_2:1708292-1708311 Msa0229920:CDS 35.0%
! CATAACGGGAGTTTCATATA+AGG + chr2_2:1708381-1708400 None:intergenic 35.0%
AGTCACAGAAGAGATCATAA+CGG + chr2_2:1708396-1708415 None:intergenic 35.0%
GGAAGTTTATAAGCATCATG+GGG - chr2_2:1708469-1708488 Msa0229920:CDS 35.0%
AGTGATCTTACTTCAAGAAC+TGG + chr2_2:1708776-1708795 None:intergenic 35.0%
! GCTTTTAAGCAACTTCAAGA+AGG - chr2_2:1708812-1708831 Msa0229920:CDS 35.0%
AGCTGATCCTTAATTGTACT+CGG + chr2_2:1708863-1708882 None:intergenic 35.0%
! ATCAATATCTTCTAGGGATC+TGG + chr2_2:1708945-1708964 None:intergenic 35.0%
AAACTGGAAGCAAATGAAGA+TGG - chr2_2:1709040-1709059 Msa0229920:CDS 35.0%
! TTTGAGTTTCTTTCTAGCCT+CGG - chr2_2:1709318-1709337 Msa0229920:intron 35.0%
!!! TCTTGAAGCTTGCAGTTTTT+TGG - chr2_2:1709432-1709451 Msa0229920:five_prime_UTR 35.0%
! TTTCTTTTGGACTACACAAG+AGG + chr2_2:1709528-1709547 None:intergenic 35.0%
GGAAGAAAATAAGTCGGAAA+AGG + chr2_2:1709637-1709656 None:intergenic 35.0%
TCCCACATATCCTTGATTTC+TGG - chr2_2:1703728-1703747 Msa0229920:three_prime_UTR 40.0%
CACCAGAAATCAAGGATATG+TGG + chr2_2:1703733-1703752 None:intergenic 40.0%
GGGAAGAGTTATCAAAGAGA+AGG - chr2_2:1704075-1704094 Msa0229920:CDS 40.0%
! CTCTCTTCCTTTTCAAACTC+AGG + chr2_2:1704337-1704356 None:intergenic 40.0%
AAGGAAGAGAGAGTTACTCA+TGG - chr2_2:1704346-1704365 Msa0229920:CDS 40.0%
GGTATTTCGTCGTTTCAAAC+TGG - chr2_2:1704367-1704386 Msa0229920:CDS 40.0%
! GTTTCAAACTGGATTTTCGG+AGG - chr2_2:1704378-1704397 Msa0229920:CDS 40.0%
!! GATGAGAGCTATTTTGTGAG+AGG - chr2_2:1704424-1704443 Msa0229920:CDS 40.0%
! TGGTGGGTGTTAAAGATGAT+AGG - chr2_2:1704500-1704519 Msa0229920:CDS 40.0%
CAGCATGAGAACGAAGTAAA+AGG - chr2_2:1704586-1704605 Msa0229920:CDS 40.0%
GCATGAGAACGAAGTAAAAG+GGG - chr2_2:1704588-1704607 Msa0229920:CDS 40.0%
!!! TTTTGACTTAGGAAAGGGCA+AGG - chr2_2:1704633-1704652 Msa0229920:CDS 40.0%
TTGAAACAACTTCGGATGTG+AGG + chr2_2:1704675-1704694 None:intergenic 40.0%
GTCGTCACTTGAAACAACTT+CGG + chr2_2:1704683-1704702 None:intergenic 40.0%
AATTGAGAATGGGAAAGCTC+GGG - chr2_2:1704762-1704781 Msa0229920:CDS 40.0%
! AGGCGGGTTTGATTCATTTA+AGG - chr2_2:1704786-1704805 Msa0229920:CDS 40.0%
CATCTACATCTAAAAGTGGG+TGG + chr2_2:1704963-1704982 None:intergenic 40.0%
GGGCATCTACATCTAAAAGT+GGG + chr2_2:1704966-1704985 None:intergenic 40.0%
!!! GTCGCTTTTCTGAGATTTCT+CGG + chr2_2:1705031-1705050 None:intergenic 40.0%
!! AGAAGATGGTGTTGATGAAG+AGG - chr2_2:1705119-1705138 Msa0229920:intron 40.0%
TGATGAAGAGGAAGAAGCAA+TGG - chr2_2:1705131-1705150 Msa0229920:intron 40.0%
TCTTATGGATCTGGGAACTT+TGG - chr2_2:1705215-1705234 Msa0229920:intron 40.0%
TTATAGCTAGGAGAATGGCA+AGG - chr2_2:1705268-1705287 Msa0229920:intron 40.0%
GAAATAGGCGCAACATTAGA+GGG + chr2_2:1705342-1705361 None:intergenic 40.0%
AGAAATAGGCGCAACATTAG+AGG + chr2_2:1705343-1705362 None:intergenic 40.0%
GGGTTTCGTCTAACAGAAAT+AGG + chr2_2:1705357-1705376 None:intergenic 40.0%
TTCCCTGATGAATCTTATGC+TGG - chr2_2:1705384-1705403 Msa0229920:intron 40.0%
TGCCAGCATAAGATTCATCA+GGG + chr2_2:1705389-1705408 None:intergenic 40.0%
ATGCCAGCATAAGATTCATC+AGG + chr2_2:1705390-1705409 None:intergenic 40.0%
TGATGAATCTTATGCTGGCA+TGG - chr2_2:1705389-1705408 Msa0229920:intron 40.0%
GATGAATCTTATGCTGGCAT+GGG - chr2_2:1705390-1705409 Msa0229920:intron 40.0%
ATGTCAAAAGGGTTTCGTCT+AGG + chr2_2:1705456-1705475 None:intergenic 40.0%
TTCTCTTCATTTGGGTCGTA+CGG + chr2_2:1705480-1705499 None:intergenic 40.0%
!! GAGGCATGAAAGTTTTAGCA+TGG - chr2_2:1705569-1705588 Msa0229920:intron 40.0%
AGCCTGTGTTTGTATCTGAA+AGG - chr2_2:1705643-1705662 Msa0229920:intron 40.0%
TTACTTCACTAGATTGCCTC+TGG + chr2_2:1705695-1705714 None:intergenic 40.0%
GAATCTGTGGAGATGATAGA+AGG - chr2_2:1705882-1705901 Msa0229920:intron 40.0%
ATCGACGAGCAATTCAATGA+TGG - chr2_2:1706005-1706024 Msa0229920:CDS 40.0%
TCGACGAGCAATTCAATGAT+GGG - chr2_2:1706006-1706025 Msa0229920:CDS 40.0%
TGTCGTCAATCACTTCTGAT+CGG + chr2_2:1706094-1706113 None:intergenic 40.0%
GCAAATTTGCAGCATGAAGA+TGG - chr2_2:1706140-1706159 Msa0229920:CDS 40.0%
AACTTCAACCCAAACTTCAG+TGG - chr2_2:1706181-1706200 Msa0229920:CDS 40.0%
TGATTCCTCCACTGAAGTTT+GGG + chr2_2:1706192-1706211 None:intergenic 40.0%
TTGATTCCTCCACTGAAGTT+TGG + chr2_2:1706193-1706212 None:intergenic 40.0%
TTGATTCCTCGACTGAAGTT+CGG + chr2_2:1706226-1706245 None:intergenic 40.0%
AGTCATAAACTGGTACCAGT+GGG + chr2_2:1706283-1706302 None:intergenic 40.0%
GATATAAGCTGTTCTGCTGA+GGG + chr2_2:1706314-1706333 None:intergenic 40.0%
AGATATAAGCTGTTCTGCTG+AGG + chr2_2:1706315-1706334 None:intergenic 40.0%
TGTTGCTGAATCAGAAGACA+AGG + chr2_2:1706345-1706364 None:intergenic 40.0%
!! AGCAACAGAGTTTTCTGAGA+CGG - chr2_2:1706358-1706377 Msa0229920:CDS 40.0%
CAAAAATGAAATGAGGTCCG+AGG - chr2_2:1706514-1706533 Msa0229920:CDS 40.0%
TCAGTACAATGTTACTGCAG+AGG - chr2_2:1706553-1706572 Msa0229920:CDS 40.0%
! TGTGGATTCCAACTTTTCTC+TGG - chr2_2:1706637-1706656 Msa0229920:CDS 40.0%
! GAAAAGGGTGTAACTGATTC+AGG - chr2_2:1706671-1706690 Msa0229920:CDS 40.0%
GCCAGATGATAGTTTGAATC+TGG + chr2_2:1706773-1706792 None:intergenic 40.0%
!! AAGTCTTGTTGTCAAGTTCC+AGG - chr2_2:1707062-1707081 Msa0229920:CDS 40.0%
!! AGTCTTGTTGTCAAGTTCCA+GGG - chr2_2:1707063-1707082 Msa0229920:CDS 40.0%
! ATCCAGATCTTGGTGGATAA+TGG + chr2_2:1707101-1707120 None:intergenic 40.0%
GATTCTTATCCAGATCTTGG+TGG + chr2_2:1707108-1707127 None:intergenic 40.0%
ACAACGACTTCCAATTGCTT+GGG + chr2_2:1707329-1707348 None:intergenic 40.0%
TACAACGACTTCCAATTGCT+TGG + chr2_2:1707330-1707349 None:intergenic 40.0%
AATATGGAAACTGATCCTGC+GGG - chr2_2:1707565-1707584 Msa0229920:CDS 40.0%
TGTATCTTAGATTATCCCGC+AGG + chr2_2:1707583-1707602 None:intergenic 40.0%
! AAGGCTTGGTTGTTATTGCA+CGG + chr2_2:1707678-1707697 None:intergenic 40.0%
! ATCAAAATCTGAGGTACCCT+AGG + chr2_2:1707762-1707781 None:intergenic 40.0%
! TGGGATTTCTGGGTATTCAA+GGG + chr2_2:1707891-1707910 None:intergenic 40.0%
! TTGGGATTTCTGGGTATTCA+AGG + chr2_2:1707892-1707911 None:intergenic 40.0%
CCCAGAAATCCCAATTCAAT+AGG - chr2_2:1707898-1707917 Msa0229920:CDS 40.0%
GCCTATTGAATTGGGATTTC+TGG + chr2_2:1707902-1707921 None:intergenic 40.0%
! CTGATGCTAGCCTATTGAAT+TGG + chr2_2:1707911-1707930 None:intergenic 40.0%
TCAATAGGCTAGCATCAGAT+AGG - chr2_2:1707913-1707932 Msa0229920:CDS 40.0%
GATGTCAAACAGAGGATACT+TGG - chr2_2:1708015-1708034 Msa0229920:CDS 40.0%
CTGCTTGCATTGCATTTGTT+TGG - chr2_2:1708196-1708215 Msa0229920:CDS 40.0%
CAATTCTCCAACTCCATCAT+TGG + chr2_2:1708345-1708364 None:intergenic 40.0%
GTCACAGAAGAGATCATAAC+GGG + chr2_2:1708395-1708414 None:intergenic 40.0%
AAACTTAGTTCCTTCAGCAG+AGG - chr2_2:1708526-1708545 Msa0229920:CDS 40.0%
AACTTAGTTCCTTCAGCAGA+GGG - chr2_2:1708527-1708546 Msa0229920:CDS 40.0%
CGAGGAATTCTTGTCAGAAT+TGG - chr2_2:1708610-1708629 Msa0229920:CDS 40.0%
TTGTCAGAATTGGACACAGT+TGG - chr2_2:1708620-1708639 Msa0229920:CDS 40.0%
TGTCAGAATTGGACACAGTT+GGG - chr2_2:1708621-1708640 Msa0229920:CDS 40.0%
!! ACAGTTGGGGATTTTAGTGT+CGG - chr2_2:1708635-1708654 Msa0229920:CDS 40.0%
! GAGCATCTCTAGTTTCTTCA+TGG + chr2_2:1708694-1708713 None:intergenic 40.0%
!!! TCTGCTGTTTTTACATCCTC+AGG + chr2_2:1708731-1708750 None:intergenic 40.0%
TGAGGATGTAAAAACAGCAG+AGG - chr2_2:1708730-1708749 Msa0229920:CDS 40.0%
CATCCTTCCGAGTACAATTA+AGG - chr2_2:1708853-1708872 Msa0229920:CDS 40.0%
GATCCTTAATTGTACTCGGA+AGG + chr2_2:1708859-1708878 None:intergenic 40.0%
TGATGAATCTAGAGATCACG+TGG - chr2_2:1708889-1708908 Msa0229920:CDS 40.0%
TCTTCTGCATCTCTTTCTTC+TGG + chr2_2:1709010-1709029 None:intergenic 40.0%
AGAAGATGCTTCAGTCAAAC+TGG - chr2_2:1709024-1709043 Msa0229920:CDS 40.0%
!! CAGAACTCCAGTTGGTAAAT+TGG - chr2_2:1709117-1709136 Msa0229920:intron 40.0%
CTTATTACTAGAGCCGCTAA+TGG + chr2_2:1709152-1709171 None:intergenic 40.0%
! CATTAGCGGCTCTAGTAATA+AGG - chr2_2:1709150-1709169 Msa0229920:intron 40.0%
TCGCTCAAAATGACTTCTCT+CGG + chr2_2:1709240-1709259 None:intergenic 40.0%
ACCAAATTGCTCACACTGAA+GGG + chr2_2:1709468-1709487 None:intergenic 40.0%
TACCAAATTGCTCACACTGA+AGG + chr2_2:1709469-1709488 None:intergenic 40.0%
ATACATCAAGTAGCCGTTTC+TGG - chr2_2:1709608-1709627 Msa0229920:five_prime_UTR 40.0%
TACATCAAGTAGCCGTTTCT+GGG - chr2_2:1709609-1709628 Msa0229920:five_prime_UTR 40.0%
! AAAAAAGAGAGAGTGTGGGG+CGG + chr2_2:1703594-1703613 None:intergenic 45.0%
AGAGCAGTGCAGACTAAAAC+AGG + chr2_2:1704274-1704293 None:intergenic 45.0%
! TTGGGACCCTTCTCAGTTTT+GGG - chr2_2:1704299-1704318 Msa0229920:CDS 45.0%
GTTGAAGAAGCGAGTTTGGT+GGG - chr2_2:1704484-1704503 Msa0229920:CDS 45.0%
GATAGGAGTGAGGATGATCA+TGG - chr2_2:1704517-1704536 Msa0229920:CDS 45.0%
TTTGCTTTATGACTCTGCGC+TGG - chr2_2:1704540-1704559 Msa0229920:CDS 45.0%
!! GCTGGATGATGTTAACTTGC+AGG - chr2_2:1704558-1704577 Msa0229920:CDS 45.0%
AAGGGCAAGGAAGTTCATGA+CGG - chr2_2:1704646-1704665 Msa0229920:CDS 45.0%
ATTGAGAATGGGAAAGCTCG+GGG - chr2_2:1704763-1704782 Msa0229920:CDS 45.0%
ATTGTTCGCCCAGTTCATCT+TGG - chr2_2:1704821-1704840 Msa0229920:CDS 45.0%
ACCCGTTTCCAAGATGAACT+GGG + chr2_2:1704832-1704851 None:intergenic 45.0%
! AAGACGACTCTGAGGATTCA+GGG - chr2_2:1704869-1704888 Msa0229920:intron 45.0%
TGAGGATTCAGGGTCTGATA+GGG - chr2_2:1704879-1704898 Msa0229920:intron 45.0%
CATTGGAATGATGTCAGCCA+TGG + chr2_2:1704929-1704948 None:intergenic 45.0%
! GGGGCATCTACATCTAAAAG+TGG + chr2_2:1704967-1704986 None:intergenic 45.0%
ATGCAGCATCAGAACCATCA+CGG + chr2_2:1705008-1705027 None:intergenic 45.0%
TGAAGAGGAAGAAGCAATGG+AGG - chr2_2:1705134-1705153 Msa0229920:intron 45.0%
GAAGAGGAAGAAGCAATGGA+GGG - chr2_2:1705135-1705154 Msa0229920:intron 45.0%
ATCTGCTATCAAGTGGACAG+AGG - chr2_2:1705179-1705198 Msa0229920:intron 45.0%
!! TGGGAACTTTGGAGCTTGAA+AGG - chr2_2:1705226-1705245 Msa0229920:intron 45.0%
CGCAACATTAGAGGGAACAT+CGG + chr2_2:1705334-1705353 None:intergenic 45.0%
AGGCTGTAGAATAGATGGAG+CGG + chr2_2:1705436-1705455 None:intergenic 45.0%
CGTCTAGGCTGTAGAATAGA+TGG + chr2_2:1705441-1705460 None:intergenic 45.0%
GGTCGTACGGAATGTCAAAA+GGG + chr2_2:1705467-1705486 None:intergenic 45.0%
TAGCATGGGACCTTCAGTAT+TGG - chr2_2:1705584-1705603 Msa0229920:intron 45.0%
AGCATGGGACCTTCAGTATT+GGG - chr2_2:1705585-1705604 Msa0229920:intron 45.0%
TGGGGATATCTAAGCAAGAG+AGG - chr2_2:1705604-1705623 Msa0229920:intron 45.0%
ATCTGAAAGGATGGTTTCGG+AGG - chr2_2:1705656-1705675 Msa0229920:intron 45.0%
TCTGAAAGGATGGTTTCGGA+GGG - chr2_2:1705657-1705676 Msa0229920:intron 45.0%
! AGGGAACAAGCTATTTCCAG+AGG - chr2_2:1705676-1705695 Msa0229920:intron 45.0%
!! GAACTTGCTGACTCAGTATC+TGG + chr2_2:1705741-1705760 None:intergenic 45.0%
GATACTGAGTCAGCAAGTTC+AGG - chr2_2:1705741-1705760 Msa0229920:intron 45.0%
TTTGGATGGCGTTTCTGTTG+AGG - chr2_2:1705827-1705846 Msa0229920:intron 45.0%
TGTGGAGATGATAGAAGGTG+AGG - chr2_2:1705887-1705906 Msa0229920:intron 45.0%
GAAGATGAAATAGTGCTCGG+TGG - chr2_2:1705930-1705949 Msa0229920:intron 45.0%
! AGTGGAAGATCCTTCTGAGA+TGG - chr2_2:1705953-1705972 Msa0229920:intron 45.0%
ATTTCAAGCTCTCCTGTTGC+AGG + chr2_2:1705987-1706006 None:intergenic 45.0%
CGACGAGCAATTCAATGATG+GGG - chr2_2:1706007-1706026 Msa0229920:CDS 45.0%
GTCAATCACTTCTGATCGGT+AGG + chr2_2:1706090-1706109 None:intergenic 45.0%
GATTGACGACATACCTGATG+AGG - chr2_2:1706103-1706122 Msa0229920:CDS 45.0%
GGGTTGAAGTTCTCGATTCT+GGG + chr2_2:1706172-1706191 None:intergenic 45.0%
! TGGGTTGAAGTTCTCGATTC+TGG + chr2_2:1706173-1706192 None:intergenic 45.0%
TTCAACCCAAACTTCAGTGG+AGG - chr2_2:1706184-1706203 Msa0229920:CDS 45.0%
TGATTCCTCGACTGAAGTTC+GGG + chr2_2:1706225-1706244 None:intergenic 45.0%
CTTCCAGCATATAAGTGGTG+AGG - chr2_2:1706247-1706266 Msa0229920:CDS 45.0%
GTCATAAACTGGTACCAGTG+GGG + chr2_2:1706282-1706301 None:intergenic 45.0%
CAGTCATAAACTGGTACCAG+TGG + chr2_2:1706284-1706303 None:intergenic 45.0%
!! GTAGTATCGACTGAGACAGT+AGG + chr2_2:1706389-1706408 None:intergenic 45.0%
AGTCGATACTACTGCTGATG+TGG - chr2_2:1706397-1706416 Msa0229920:CDS 45.0%
GTACAAGCCCAATGACAAAC+TGG - chr2_2:1706430-1706449 Msa0229920:CDS 45.0%
! TTTGACTTCCGCATGCAGTT+CGG + chr2_2:1706498-1706517 None:intergenic 45.0%
GTTGGATAATGAGTCTGTGG+AGG - chr2_2:1706811-1706830 Msa0229920:CDS 45.0%
AGATGAAATGCCAGATTCCG+TGG - chr2_2:1706901-1706920 Msa0229920:CDS 45.0%
GTGATGAGAATCAGAAGCCA+CGG + chr2_2:1706921-1706940 None:intergenic 45.0%
ACGCATATTTCCGATCGAAC+AGG - chr2_2:1707036-1707055 Msa0229920:CDS 45.0%
CACCATTATCCACCAAGATC+TGG - chr2_2:1707096-1707115 Msa0229920:CDS 45.0%
CTGACTTTCATCGTGATCAC+TGG + chr2_2:1707170-1707189 None:intergenic 45.0%
CAGTGATCACGATGAAAGTC+AGG - chr2_2:1707168-1707187 Msa0229920:CDS 45.0%
! CAACCAAGCCTTATCTCACT+AGG - chr2_2:1707686-1707705 Msa0229920:CDS 45.0%
GCATACCACCTAGTGAGATA+AGG + chr2_2:1707697-1707716 None:intergenic 45.0%
!! TTGCAACTGTATTGGCTCCT+AGG - chr2_2:1707742-1707761 Msa0229920:CDS 45.0%
!! TGCAACTGTATTGGCTCCTA+GGG - chr2_2:1707743-1707762 Msa0229920:CDS 45.0%
TTAGCAGTCTCAGTAGGAGA+TGG + chr2_2:1707868-1707887 None:intergenic 45.0%
CATTCTGGTAGAACCTTCAC+AGG - chr2_2:1708307-1708326 Msa0229920:CDS 45.0%
! AACTCCATCATTGGAAGTGC+CGG + chr2_2:1708336-1708355 None:intergenic 45.0%
TCCAAATCCACTTCACCAGT+GGG + chr2_2:1708452-1708471 None:intergenic 45.0%
TTCCAAATCCACTTCACCAG+TGG + chr2_2:1708453-1708472 None:intergenic 45.0%
GTCAGAATTGGACACAGTTG+GGG - chr2_2:1708622-1708641 Msa0229920:CDS 45.0%
!!! GATTTTAGTGTCGGTGATGC+TGG - chr2_2:1708644-1708663 Msa0229920:CDS 45.0%
TCAACTTAGTTCACTGCCTG+AGG - chr2_2:1708712-1708731 Msa0229920:CDS 45.0%
AAAAACAGCAGAGGTTGAGC+AGG - chr2_2:1708739-1708758 Msa0229920:CDS 45.0%
! ATCTGGCTTCAATGACTGGA+AGG + chr2_2:1708928-1708947 None:intergenic 45.0%
ACCCTTCAGTGTGAGCAATT+TGG - chr2_2:1709464-1709483 Msa0229920:five_prime_UTR 45.0%
TACACAAGAGGCAACACTGT+TGG + chr2_2:1709516-1709535 None:intergenic 45.0%
TCGGAAAAGGAACCCAGAAA+CGG + chr2_2:1709624-1709643 None:intergenic 45.0%
!!! ATAAAAATTAGATTTTTTTT+AGG + chr2_2:1703833-1703852 None:intergenic 5.0%
TCTGCACTGCTCTTCTGCTT+GGG - chr2_2:1704281-1704300 Msa0229920:CDS 50.0%
! CTTGGGACCCTTCTCAGTTT+TGG - chr2_2:1704298-1704317 Msa0229920:CDS 50.0%
TGGCTGCCCAAAACTGAGAA+GGG + chr2_2:1704308-1704327 None:intergenic 50.0%
TTGGCTGCCCAAAACTGAGA+AGG + chr2_2:1704309-1704328 None:intergenic 50.0%
! TGGCGTTGAAGAAGCGAGTT+TGG - chr2_2:1704480-1704499 Msa0229920:CDS 50.0%
CGTTGAAGAAGCGAGTTTGG+TGG - chr2_2:1704483-1704502 Msa0229920:CDS 50.0%
AGGGCAAGGAAGTTCATGAC+GGG - chr2_2:1704647-1704666 Msa0229920:CDS 50.0%
CGCCCAGTTCATCTTGGAAA+CGG - chr2_2:1704827-1704846 Msa0229920:CDS 50.0%
GCCCAGTTCATCTTGGAAAC+GGG - chr2_2:1704828-1704847 Msa0229920:CDS 50.0%
CACCCGTTTCCAAGATGAAC+TGG + chr2_2:1704833-1704852 None:intergenic 50.0%
CAGTTCATCTTGGAAACGGG+TGG - chr2_2:1704831-1704850 Msa0229920:CDS 50.0%
CACTGATGAAGACGACTCTG+AGG - chr2_2:1704861-1704880 Msa0229920:CDS 50.0%
! GAAGACGACTCTGAGGATTC+AGG - chr2_2:1704868-1704887 Msa0229920:intron 50.0%
CTGAGGATTCAGGGTCTGAT+AGG - chr2_2:1704878-1704897 Msa0229920:intron 50.0%
TTCTTCACCGGATGCTTCCA+TGG - chr2_2:1704909-1704928 Msa0229920:intron 50.0%
!! ATGTCAGCCATGGAAGCATC+CGG + chr2_2:1704919-1704938 None:intergenic 50.0%
TGCAGCATCAGAACCATCAC+GGG + chr2_2:1705007-1705026 None:intergenic 50.0%
CATGGTGAAGCGGAAGAAGA+TGG - chr2_2:1705105-1705124 Msa0229920:intron 50.0%
GCTTGAAAGGAACCGACGAT+TGG - chr2_2:1705239-1705258 Msa0229920:intron 50.0%
ATGGGATTACCACCCATTCC+TGG - chr2_2:1705408-1705427 Msa0229920:intron 50.0%
AGAATAGATGGAGCGGAACC+AGG + chr2_2:1705429-1705448 None:intergenic 50.0%
GGGTCGTACGGAATGTCAAA+AGG + chr2_2:1705468-1705487 None:intergenic 50.0%
GCATGGGACCTTCAGTATTG+GGG - chr2_2:1705586-1705605 Msa0229920:intron 50.0%
GTCAGCAAGTTCAGGTGATC+AGG - chr2_2:1705749-1705768 Msa0229920:intron 50.0%
GTTCAGGTGATCAGGATGAG+AGG - chr2_2:1705757-1705776 Msa0229920:intron 50.0%
! GTTTCTGTTGAGGCTGGTCA+TGG - chr2_2:1705837-1705856 Msa0229920:intron 50.0%
! TGAAATAGTGCTCGGTGGAG+TGG - chr2_2:1705935-1705954 Msa0229920:intron 50.0%
CTGCTGCTCACATCAACACT+TGG + chr2_2:1706053-1706072 None:intergenic 50.0%
TCACTTCTGATCGGTAGGAC+TGG + chr2_2:1706085-1706104 None:intergenic 50.0%
TTCAACCCGAACTTCAGTCG+AGG - chr2_2:1706217-1706236 Msa0229920:CDS 50.0%
CCACCTCACCACTTATATGC+TGG + chr2_2:1706253-1706272 None:intergenic 50.0%
CCAGCATATAAGTGGTGAGG+TGG - chr2_2:1706250-1706269 Msa0229920:CDS 50.0%
!! GGTGGGCTACAGTCATAAAC+TGG + chr2_2:1706293-1706312 None:intergenic 50.0%
TAAGCTGTTCTGCTGAGGGT+GGG + chr2_2:1706310-1706329 None:intergenic 50.0%
ATAAGCTGTTCTGCTGAGGG+TGG + chr2_2:1706311-1706330 None:intergenic 50.0%
CAAGCCCAATGACAAACTGG+AGG - chr2_2:1706433-1706452 Msa0229920:CDS 50.0%
ACAGAAAACTCAGCCCTTGC+AGG + chr2_2:1706620-1706639 None:intergenic 50.0%
! TGCAAGGGCTGAGTTTTCTG+TGG - chr2_2:1706619-1706638 Msa0229920:CDS 50.0%
GAATCAGAAGCCACGGAATC+TGG + chr2_2:1706914-1706933 None:intergenic 50.0%
TTGTCAAGTTCCAGGGAGCA+AGG - chr2_2:1707070-1707089 Msa0229920:CDS 50.0%
!! AATGGTGTTACCTTGCTCCC+TGG + chr2_2:1707083-1707102 None:intergenic 50.0%
CCACCTAGTGAGATAAGGCT+TGG + chr2_2:1707692-1707711 None:intergenic 50.0%
! CCAAGCCTTATCTCACTAGG+TGG - chr2_2:1707689-1707708 Msa0229920:CDS 50.0%
! CAAGGGTTAGCAGTCTCAGT+AGG + chr2_2:1707874-1707893 None:intergenic 50.0%
GTAGAACCTTCACAGGATGC+CGG - chr2_2:1708314-1708333 Msa0229920:CDS 50.0%
! GGCACTTCCAATGATGGAGT+TGG - chr2_2:1708335-1708354 Msa0229920:CDS 50.0%
AGTGGGTGAACGGAATTCAG+GGG + chr2_2:1708435-1708454 None:intergenic 50.0%
CAGTGGGTGAACGGAATTCA+GGG + chr2_2:1708436-1708455 None:intergenic 50.0%
! ACCCACTGGTGAAGTGGATT+TGG - chr2_2:1708448-1708467 Msa0229920:CDS 50.0%
! AGGGATCTGGCTTCAATGAC+TGG + chr2_2:1708932-1708951 None:intergenic 50.0%
TCTGCTCGTTTCTTCAGCAC+CGG + chr2_2:1709101-1709120 None:intergenic 50.0%
GAAACGAGCAGAACTCCAGT+TGG - chr2_2:1709109-1709128 Msa0229920:intron 50.0%
AGAATCGCTAGAGCTCGAAC+TGG + chr2_2:1709209-1709228 None:intergenic 50.0%
!! TTCTAGCCTCGGAAGTACCA+TGG - chr2_2:1709329-1709348 Msa0229920:intron 50.0%
!! TCTAGCCTCGGAAGTACCAT+GGG - chr2_2:1709330-1709349 Msa0229920:intron 50.0%
TACCATGGGGTCTTGGCTAA+TGG - chr2_2:1709344-1709363 Msa0229920:intron 50.0%
TACCATTAGCCAAGACCCCA+TGG + chr2_2:1709349-1709368 None:intergenic 50.0%
GGTCTTGGCTAATGGTAGTC+AGG - chr2_2:1709352-1709371 Msa0229920:intron 50.0%
TGGCTAATGGTAGTCAGGTC+AGG - chr2_2:1709357-1709376 Msa0229920:intron 50.0%
GTCTGCACTGCTCTTCTGCT+TGG - chr2_2:1704280-1704299 Msa0229920:CDS 55.0%
GGATTCAGGGTCTGATAGGG+CGG - chr2_2:1704882-1704901 Msa0229920:intron 55.0%
TAGGGCGGAGAGTTCTTCAC+CGG - chr2_2:1704897-1704916 Msa0229920:intron 55.0%
GGGTGGAGCTCATCAAGCAT+TGG + chr2_2:1704946-1704965 None:intergenic 55.0%
GGACAAATGAGCAGGCTGTG+GGG + chr2_2:1704986-1705005 None:intergenic 55.0%
GGGACAAATGAGCAGGCTGT+GGG + chr2_2:1704987-1705006 None:intergenic 55.0%
CCATCACGGGACAAATGAGC+AGG + chr2_2:1704994-1705013 None:intergenic 55.0%
CCTGCTCATTTGTCCCGTGA+TGG - chr2_2:1704991-1705010 Msa0229920:intron 55.0%
GAGGAAGAAGCAATGGAGGG+TGG - chr2_2:1705138-1705157 Msa0229920:intron 55.0%
GATGGAGCGGAACCAGGAAT+GGG + chr2_2:1705423-1705442 None:intergenic 55.0%
AGATGGAGCGGAACCAGGAA+TGG + chr2_2:1705424-1705443 None:intergenic 55.0%
GATGGCGTTTCTGTTGAGGC+TGG - chr2_2:1705831-1705850 Msa0229920:intron 55.0%
! GTTGAGGCTGGTCATGGAAG+TGG - chr2_2:1705843-1705862 Msa0229920:intron 55.0%
AGCCTCTTCCGAACTGCATG+CGG - chr2_2:1706487-1706506 Msa0229920:CDS 55.0%
TTCCGCATGCAGTTCGGAAG+AGG + chr2_2:1706492-1706511 None:intergenic 55.0%
GATGCCGGCACTTCCAATGA+TGG - chr2_2:1708329-1708348 Msa0229920:CDS 55.0%
CCAGTGGGTGAACGGAATTC+AGG + chr2_2:1708437-1708456 None:intergenic 55.0%
CCTGAATTCCGTTCACCCAC+TGG - chr2_2:1708434-1708453 Msa0229920:CDS 55.0%
CCACTTCACCAGTGGGTGAA+CGG + chr2_2:1708445-1708464 None:intergenic 55.0%
GACATGTAGCCCTCTGCTGA+AGG + chr2_2:1708539-1708558 None:intergenic 55.0%
!! CTAGCCTCGGAAGTACCATG+GGG - chr2_2:1709331-1709350 Msa0229920:intron 55.0%
AAGACCCCATGGTACTTCCG+AGG + chr2_2:1709338-1709357 None:intergenic 55.0%
!! TCGGAAGTACCATGGGGTCT+TGG - chr2_2:1709337-1709356 Msa0229920:intron 55.0%
GAGAATGGGAAAGCTCGGGG+AGG - chr2_2:1704766-1704785 Msa0229920:CDS 60.0%
AATGGGAAAGCTCGGGGAGG+CGG - chr2_2:1704769-1704788 Msa0229920:CDS 60.0%
CGGGACAAATGAGCAGGCTG+TGG + chr2_2:1704988-1705007 None:intergenic 60.0%
AGCAATGGAGGGTGGCCAAG+AGG - chr2_2:1705146-1705165 Msa0229920:intron 60.0%
TGAGGTGGAAGAGACCCCAC+TGG - chr2_2:1706265-1706284 Msa0229920:CDS 60.0%
!! GAAGTGCCGGCATCCTGTGA+AGG + chr2_2:1708323-1708342 None:intergenic 60.0%
CCGTTCACCCACTGGTGAAG+TGG - chr2_2:1708442-1708461 Msa0229920:CDS 60.0%
ATGGGAAAGCTCGGGGAGGC+GGG - chr2_2:1704770-1704789 Msa0229920:CDS 65.0%
GGAGCGGAACCAGGAATGGG+TGG + chr2_2:1705420-1705439 None:intergenic 65.0%
Chromosome Type Strat End Strand Name
chr2_2 gene 1703503 1709673 1703503 ID=Msa0229920;Name=Msa0229920
chr2_2 mRNA 1703503 1709673 1703503 ID=Msa0229920-mRNA-1;Parent=Msa0229920;Name=Msa0229920-mRNA-1;_AED=0.00;_eAED=0.00;_QI=339|1|1|1|0.33|0.25|4|439|1342
chr2_2 exon 1703503 1704880 1703503 ID=Msa0229920-mRNA-1:exon:633;Parent=Msa0229920-mRNA-1
chr2_2 exon 1705987 1709112 1705987 ID=Msa0229920-mRNA-1:exon:632;Parent=Msa0229920-mRNA-1
chr2_2 exon 1709258 1709313 1709258 ID=Msa0229920-mRNA-1:exon:631;Parent=Msa0229920-mRNA-1
chr2_2 exon 1709427 1709673 1709427 ID=Msa0229920-mRNA-1:exon:630;Parent=Msa0229920-mRNA-1
chr2_2 five_prime_UTR 1709427 1709673 1709427 ID=Msa0229920-mRNA-1:five_prime_utr;Parent=Msa0229920-mRNA-1
chr2_2 five_prime_UTR 1709258 1709313 1709258 ID=Msa0229920-mRNA-1:five_prime_utr;Parent=Msa0229920-mRNA-1
chr2_2 five_prime_UTR 1709077 1709112 1709077 ID=Msa0229920-mRNA-1:five_prime_utr;Parent=Msa0229920-mRNA-1
chr2_2 CDS 1705987 1709076 1705987 ID=Msa0229920-mRNA-1:cds;Parent=Msa0229920-mRNA-1
chr2_2 CDS 1703942 1704880 1703942 ID=Msa0229920-mRNA-1:cds;Parent=Msa0229920-mRNA-1
chr2_2 three_prime_UTR 1703503 1703941 1703503 ID=Msa0229920-mRNA-1:three_prime_utr;Parent=Msa0229920-mRNA-1
Gene Sequence

>Msa0229920

ATGGGATCAGTGATTGAAATTGGAATCAAAGTTAGGAAATTTGTTTTCATTTCAATCAGAGGGGTTTACAGATCAGCTTGCCATCATCCATTTCTTTTGGGTTTTTTAGGATTTTTGCTGTTTTTGTACAGATATTTTCCTTTTTTGTTTTCTGTTTTGGTTTCTGCGTCTCCTGTTTTAGTCTGCACTGCTCTTCTGCTTGGGACCCTTCTCAGTTTTGGGCAGCCAAATGTGCCTGAGTTTGAAAAGGAAGAGAGAGTTACTCATGGTATTTCGTCGTTTCAAACTGGATTTTCGGAGGGTGAAACCATTGTTTCTGATAGAGATGAGAGCTATTTTGTGAGAGGATATTCAGAACATAGAAGTGATATTGAAGAGAGTGGCGTTGAAGAAGCGAGTTTGGTGGGTGTTAAAGATGATAGGAGTGAGGATGATCATGGTTTGCTTTATGACTCTGCGCTGGATGATGTTAACTTGCAGGATATTCAGCATGAGAACGAAGTAAAAGGGGATGTAGAAAGGGAATTACATAGTTTTGACTTAGGAAAGGGCAAGGAAGTTCATGACGGGAACCTCACATCCGAAGTTGTTTCAAGTGACGACGAAGCTATTGAGAAACAGTATGTCATGGTTCAAAAAGAAGATGATGATGATATTTTTGAAATTGAGAATGGGAAAGCTCGGGGAGGCGGGTTTGATTCATTTAAGGAAGGTGATGCAGATTGTTCGCCCAGTTCATCTTGGAAACGGGTGGAGAACAACACTGATGAAGACGACTCTGAGGATTCAGGGTCTGATAGGGCGGAGAGTTCTTCACCGGATGCTTCCATGGCTGACATCATTCCAATGCTTGATGAGCTCCACCCACTTTTAGATGTAGATGCCCCACAGCCTGCTCATTTGTCCCGTGATGGTTCTGATGCTGCATCCGAGAAATCTCAGAAAAGCGACAACGACGATGACGATGATGACAACAGTGTCGAATCAGATGAAGATATTGAAAATCATGGTGAAGCGGAAGAAGATGGTGTTGATGAAGAGGAAGAAGCAATGGAGGGTGGCCAAGAGGATGAAAGTAAATCTGCTATCAAGTGGACAGAGGATGACCAAAAGAATCTTATGGATCTGGGAACTTTGGAGCTTGAAAGGAACCGACGATTGGAAAGTCTTATAGCTAGGAGAATGGCAAGGAGATTGATGACTGAAAAGAATCTAATAGACTTAGATAGTGCCGATGTTCCCTCTAATGTTGCGCCTATTTCTGTTAGACGAAACCCTTTTGATTTCCCTGATGAATCTTATGCTGGCATGGGATTACCACCCATTCCTGGTTCCGCTCCATCTATTCTACAGCCTAGACGAAACCCTTTTGACATTCCGTACGACCCAAATGAAGAGAAACCTGATCTTAAAAGGGACAGTTTTCAACAAGAGTTCACACAGTTTAATCAAAAAGATGCATTTTTTCGGAGGCATGAAAGTTTTAGCATGGGACCTTCAGTATTGGGGATATCTAAGCAAGAGAGGCATGATATTAATTGGAAGCCTGTGTTTGTATCTGAAAGGATGGTTTCGGAGGGAACAAGCTATTTCCAGAGGCAATCTAGTGAAGTAAGTGATTCAAAATTGAGTTCTGTTCCAGATACTGAGTCAGCAAGTTCAGGTGATCAGGATGAGAGGAAATTAAGTGAACGGGACTTGTCTCCAGAGACTGAATTAACATCTAATTTGGATGGCGTTTCTGTTGAGGCTGGTCATGGAAGTGGATCCTCTGAAGAAAATGAATCTGTGGAGATGATAGAAGGTGAGGAGAGCAATGTTTACCGTGATGAAGATGAAATAGTGCTCGGTGGAGTGGAAGATCCTTCTGAGATGGAATTTTATCCTGCAACAGGAGAGCTTGAAATCGACGAGCAATTCAATGATGGGGAAACAGATTTGACAAGAGAACCAAGTGTTGATGTGAGCAGCAGCAGATCAAGCCAGTCCTACCGATCAGAAGTGATTGACGACATACCTGATGAGGAATCAGAAAAAACTGCAAATTTGCAGCATGAAGATGGTCACTTCCCAGAATCGAGAACTTCAACCCAAACTTCAGTGGAGGAATCAATAATTTCAACCCGAACTTCAGTCGAGGAATCAAACTTCCAGCATATAAGTGGTGAGGTGGAAGAGACCCCACTGGTACCAGTTTATGACTGTAGCCCACCCTCAGCAGAACAGCTTATATCTTTTTCTTCCTTGTCTTCTGATTCAGCAACAGAGTTTTCTGAGACGGCATTGCCTACTGTCTCAGTCGATACTACTGCTGATGTGGCTGATAAAGAGTACAAGCCCAATGACAAACTGGAGGATAATTCTTCTAATCATGAGAAAATTCAAGCAGCCTCTTCCGAACTGCATGCGGAAGTCAAAAATGAAATGAGGTCCGAGGAATCTGAAGATATAGATCAGTACAATGTTACTGCAGAGGAGTTATCTGCAGTTATACCAAGTTTTGTTGATCAAAATAGACCTGCAAGGGCTGAGTTTTCTGTGGATTCCAACTTTTCTCTGGATATTGGATCAGAAAAGGGTGTAACTGATTCAGGTTTGTTTCATGAACAGGATATAGACAACCACATATCTGCTGATTCTGAAATGCTTCATCAAGACAATGTGGAGTCTCCAGATTCAAACTATCATCTGGCTTCTGATAAGTTACATATGTTGGATAATGAGTCTGTGGAGGAAGATGCACTGCCCAATGAAGTATCTAAACTAGATAATGAAAATATGTCTGTTTCAGTACAAGATGAAGATGAAATGCCAGATTCCGTGGCTTCTGATTCTCATCACATACCTTCTAATAGTTCATCTATGCATGCATTAGGGGATTCACAGTTCTTACCAGTAGAAACAGAACATTTAGAGAAAAATTGGTCAAATGAAGAACGCATATTTCCGATCGAACAGGATAAAGTCTTGTTGTCAAGTTCCAGGGAGCAAGGTAACACCATTATCCACCAAGATCTGGATAAGAATCATCTGTCAAGCTCTGATAAATTGGTAGATGCACAATCTTCCAGTGATCACGATGAAAGTCAGAATTCTGATAACATTCTGGTAGAACCTTCACAGGATGCCGGCACTTCCAATGATGGAGTTGGAGAATTGCATGAACATGACTCCTTATATGAAACTCCCGTTATGATCTCTTCTGTGACTTCTGAAAATTCTGACACCCCTGAATTCCGTTCACCCACTGGTGAAGTGGATTTGGAAGTTTATAAGCATCATGGGGAACTTGCTAATGAAGACCAAAATGAAGCACAACAAAACTTAGTTCCTTCAGCAGAGGGCTACATGTCTCCGAATAATGAAGAAAATTTCAATGAATTTGATTATATGAAGGATATTGACGAGGAATTCTTGTCAGAATTGGACACAGTTGGGGATTTTAGTGTCGGTGATGCTGGTGTATCGCATCGTACTGACGTTGTCCATGAAGAAACTAGAGATGCTCAACTTAGTTCACTGCCTGAGGATGTAAAAACAGCAGAGGTTGAGCAGGACAATGACATACCAGTTCTTGAAGTAAGATCACTTGAAGATATTGACATAGCTTTTAAGCAACTTCAAGAAGGAGTTGATGTTAATGATGTCATCCTTCCGAGTACAATTAAGGATCAGCTTGTTAGTGATGAATCTAGAGATCACGTGGAAGTTAATTCAGACCTTCCAGTCATTGAAGCCAGATCCCTAGAAGATATTGATGTTGCTTTAGAGAAAATATCTGAAGATAATCAAGGTGAGCTGCCAGAAGAAAGAGATGCAGAAGATGCTTCAGTCAAACTGGAAGCAAATGAAGATGGCTCAGCAAAGTTGAATGAATCATTTGATGTATCAACCGGTGCTGAAGAAACGAGCAGAACTCCAGTTGGTAAATTGGAAAATGTATCCATTAGCGGCTCTAGTAATAAGGAAAAATCTCACAGTAGGAAATCTAGTTCTAGTTCCAGTTCGAGCTCTAGCGATTCTGATTGA
Protein sequence

>Msa0229920

MGSVIEIGIKVRKFVFISIRGVYRSACHHPFLLGFLGFLLFLYRYFPFLFSVLVSASPVLVCTALLLGTLLSFGQPNVPEFEKEERVTHGISSFQTGFSEGETIVSDRDESYFVRGYSEHRSDIEESGVEEASLVGVKDDRSEDDHGLLYDSALDDVNLQDIQHENEVKGDVERELHSFDLGKGKEVHDGNLTSEVVSSDDEAIEKQYVMVQKEDDDDIFEIENGKARGGGFDSFKEGDADCSPSSSWKRVENNTDEDDSEDSGSDRAESSSPDASMADIIPMLDELHPLLDVDAPQPAHLSRDGSDAASEKSQKSDNDDDDDDNSVESDEDIENHGEAEEDGVDEEEEAMEGGQEDESKSAIKWTEDDQKNLMDLGTLELERNRRLESLIARRMARRLMTEKNLIDLDSADVPSNVAPISVRRNPFDFPDESYAGMGLPPIPGSAPSILQPRRNPFDIPYDPNEEKPDLKRDSFQQEFTQFNQKDAFFRRHESFSMGPSVLGISKQERHDINWKPVFVSERMVSEGTSYFQRQSSEVSDSKLSSVPDTESASSGDQDERKLSERDLSPETELTSNLDGVSVEAGHGSGSSEENESVEMIEGEESNVYRDEDEIVLGGVEDPSEMEFYPATGELEIDEQFNDGETDLTREPSVDVSSSRSSQSYRSEVIDDIPDEESEKTANLQHEDGHFPESRTSTQTSVEESIISTRTSVEESNFQHISGEVEETPLVPVYDCSPPSAEQLISFSSLSSDSATEFSETALPTVSVDTTADVADKEYKPNDKLEDNSSNHEKIQAASSELHAEVKNEMRSEESEDIDQYNVTAEELSAVIPSFVDQNRPARAEFSVDSNFSLDIGSEKGVTDSGLFHEQDIDNHISADSEMLHQDNVESPDSNYHLASDKLHMLDNESVEEDALPNEVSKLDNENMSVSVQDEDEMPDSVASDSHHIPSNSSSMHALGDSQFLPVETEHLEKNWSNEERIFPIEQDKVLLSSSREQGNTIIHQDLDKNHLSSSDKLVDAQSSSDHDESQNSDNILVEPSQDAGTSNDGVGELHEHDSLYETPVMISSVTSENSDTPEFRSPTGEVDLEVYKHHGELANEDQNEAQQNLVPSAEGYMSPNNEENFNEFDYMKDIDEEFLSELDTVGDFSVGDAGVSHRTDVVHEETRDAQLSSLPEDVKTAEVEQDNDIPVLEVRSLEDIDIAFKQLQEGVDVNDVILPSTIKDQLVSDESRDHVEVNSDLPVIEARSLEDIDVALEKISEDNQGELPEERDAEDASVKLEANEDGSAKLNESFDVSTGAEETSRTPVGKLENVSISGSSNKEKSHSRKSSSSSSSSSSDSD*