AlfalfaGEDB Alfalfa Gene Editing Database

M. sativa cultivar zhongmu-4 / Msa1088410

Query id Subject id identity % alignment length mismatches gap openings q. start q. end s. start s. end e-value bit score
Msa1088410 MtrunA17_Chr8g0381601 89.891 366 32 2 1 366 1 361 0.0 672
Msa1088410 MtrunA17_Chr8g0381601 56.897 348 66 4 366 629 44 391 2.02e-123 371
Msa1088410 MtrunA17_Chr3g0123571 71.467 368 97 3 1 366 1 362 0.0 555
Msa1088410 MtrunA17_Chr3g0123571 57.465 355 66 5 366 635 45 399 9.58e-126 377
Msa1088410 MtrunA17_Chr8g0381611 76.638 351 2 3 366 636 40 390 0.0 518
Msa1088410 MtrunA17_Chr8g0381611 64.595 370 103 5 7 366 2 353 6.56e-162 469
Msa1088410 MtrunA17_Chr7g0227041 59.845 386 118 7 1 366 1 369 2.15e-159 463
Msa1088410 MtrunA17_Chr7g0227041 48.718 351 89 6 366 625 45 395 2.43e-103 319
Msa1088410 MtrunA17_Chr2g0326801 60.372 376 121 8 1 366 1 358 1.91e-156 455
Msa1088410 MtrunA17_Chr2g0326801 59.848 264 61 2 401 619 115 378 3.11e-105 324
Msa1088410 MtrunA17_Chr4g0028891 54.522 387 112 6 25 359 1 375 2.31e-141 417
Msa1088410 MtrunA17_Chr4g0028891 62.313 268 56 2 401 623 139 406 6.55e-109 334
Msa1088410 MtrunA17_Chr1g0189401 45.318 267 138 5 97 355 75 341 3.62e-73 240
Msa1088410 MtrunA17_Chr1g0189401 42.727 220 86 4 417 596 118 337 2.10e-48 174
Msa1088410 MtrunA17_Chr4g0047961 44.928 276 125 8 103 362 62 326 8.38e-73 238
Msa1088410 MtrunA17_Chr4g0047961 41.631 233 97 4 403 596 80 312 2.96e-50 178
Msa1088410 MtrunA17_Chr2g0281421 42.525 301 149 8 103 389 80 370 1.82e-72 239
Msa1088410 MtrunA17_Chr2g0281421 42.241 232 95 4 404 596 101 332 8.07e-51 181
Msa1088410 MtrunA17_Chr2g0276851 42.294 279 134 7 97 358 76 344 9.71e-67 223
Msa1088410 MtrunA17_Chr2g0276851 42.373 236 94 6 400 596 101 333 7.70e-50 178
Query id Subject id identity % alignment length mismatches gap openings q. start q. end s. start s. end e-value bit score
Msa1088410 AT2G28310.2 64.800 375 93 6 1 366 1 345 3.28e-173 498
Msa1088410 AT2G28310.2 60.526 266 60 2 401 621 102 367 3.35e-107 328
Msa1088410 AT2G28310.1 64.800 375 93 6 1 366 1 345 3.28e-173 498
Msa1088410 AT2G28310.1 60.526 266 60 2 401 621 102 367 3.35e-107 328
Msa1088410 AT2G28310.3 64.800 375 93 6 1 366 1 345 3.28e-173 498
Msa1088410 AT2G28310.3 60.526 266 60 2 401 621 102 367 3.35e-107 328
Msa1088410 AT1G67850.6 64.829 381 103 5 1 366 1 365 8.23e-171 493
Msa1088410 AT1G67850.6 60.364 275 64 2 401 630 122 396 1.71e-109 336
Msa1088410 AT1G67850.7 64.829 381 103 5 1 366 1 365 8.23e-171 493
Msa1088410 AT1G67850.7 60.364 275 64 2 401 630 122 396 1.71e-109 336
Msa1088410 AT1G67850.1 64.829 381 103 5 1 366 1 365 8.23e-171 493
Msa1088410 AT1G67850.1 60.364 275 64 2 401 630 122 396 1.71e-109 336
Msa1088410 AT1G67850.3 64.829 381 103 5 1 366 1 365 8.23e-171 493
Msa1088410 AT1G67850.3 60.364 275 64 2 401 630 122 396 1.71e-109 336
Msa1088410 AT1G67850.2 64.829 381 103 5 1 366 1 365 8.23e-171 493
Msa1088410 AT1G67850.2 60.364 275 64 2 401 630 122 396 1.71e-109 336
Msa1088410 AT1G67850.5 64.829 381 103 5 1 366 1 365 8.23e-171 493
Msa1088410 AT1G67850.5 60.364 275 64 2 401 630 122 396 1.71e-109 336
Msa1088410 AT1G67850.4 65.479 365 95 5 17 366 1 349 7.65e-170 489
Msa1088410 AT1G67850.4 60.364 275 64 2 401 630 106 380 8.16e-110 336
Msa1088410 AT3G27470.2 62.568 366 121 5 11 366 2 361 1.23e-165 479
Msa1088410 AT3G27470.2 49.858 353 85 6 366 626 36 388 1.42e-107 330
Msa1088410 AT3G27470.1 62.568 366 121 5 11 366 2 361 1.23e-165 479
Msa1088410 AT3G27470.1 49.858 353 85 6 366 626 36 388 1.42e-107 330
Msa1088410 AT3G27470.4 62.568 366 121 5 11 366 2 361 1.23e-165 479
Msa1088410 AT3G27470.4 49.858 353 85 6 366 626 36 388 1.42e-107 330
Msa1088410 AT3G27470.3 62.568 366 121 5 11 366 2 361 1.23e-165 479
Msa1088410 AT3G27470.3 49.858 353 85 6 366 626 36 388 1.42e-107 330
Msa1088410 AT3G27470.5 62.568 366 121 5 11 366 2 361 1.80e-165 479
Msa1088410 AT3G27470.5 49.858 353 85 6 366 626 36 388 2.01e-107 330
Msa1088410 AT1G13000.2 61.702 376 117 5 4 366 8 369 5.20e-165 478
Msa1088410 AT1G13000.2 48.986 345 89 4 366 623 49 393 3.57e-104 322
Msa1088410 AT1G13000.5 61.702 376 117 5 4 366 8 369 5.20e-165 478
Msa1088410 AT1G13000.5 48.986 345 89 4 366 623 49 393 3.57e-104 322
Msa1088410 AT1G13000.4 61.702 376 117 5 4 366 8 369 5.20e-165 478
Msa1088410 AT1G13000.4 48.986 345 89 4 366 623 49 393 3.57e-104 322
Msa1088410 AT1G13000.1 61.702 376 117 5 4 366 8 369 5.20e-165 478
Msa1088410 AT1G13000.1 48.986 345 89 4 366 623 49 393 3.57e-104 322
Msa1088410 AT1G08040.2 63.198 394 114 7 1 392 1 365 5.72e-164 474
Msa1088410 AT1G08040.2 59.559 272 65 2 401 627 109 380 5.11e-108 331
Msa1088410 AT1G08040.4 63.198 394 114 7 1 392 1 365 5.72e-164 474
Msa1088410 AT1G08040.4 59.559 272 65 2 401 627 109 380 5.11e-108 331
Msa1088410 AT1G08040.1 63.198 394 114 7 1 392 1 365 5.72e-164 474
Msa1088410 AT1G08040.1 59.559 272 65 2 401 627 109 380 5.11e-108 331
Msa1088410 AT3G26440.5 60.533 375 116 5 3 366 30 383 3.80e-162 471
Msa1088410 AT3G26440.5 60.938 256 55 2 413 623 152 407 1.06e-102 318
Msa1088410 AT3G26440.1 60.695 374 115 5 4 366 8 360 5.33e-162 470
Msa1088410 AT3G26440.1 60.938 256 55 2 413 623 129 384 1.24e-102 318
Msa1088410 AT3G26440.2 60.695 374 115 5 4 366 8 360 5.33e-162 470
Msa1088410 AT3G26440.2 60.938 256 55 2 413 623 129 384 1.24e-102 318
Msa1088410 AT3G26440.6 60.533 375 116 5 3 366 30 383 5.75e-162 471
Msa1088410 AT3G26440.6 60.938 256 55 2 413 623 152 407 1.58e-102 318
Msa1088410 AT3G26440.3 60.533 375 116 5 3 366 7 360 6.82e-162 469
Msa1088410 AT3G26440.3 61.570 242 57 3 413 621 129 367 8.86e-95 296
Msa1088410 AT1G08040.3 62.944 394 111 8 1 392 1 361 1.42e-161 468
Msa1088410 AT1G08040.3 59.559 272 65 2 401 627 105 376 4.44e-108 331
Msa1088410 AT3G26440.4 58.556 374 101 6 3 366 7 336 3.72e-152 444
Msa1088410 AT3G26440.4 60.938 256 55 2 413 623 105 360 2.03e-102 316
Msa1088410 AT1G24570.2 60.278 360 105 8 17 366 19 350 1.71e-144 425
Msa1088410 AT1G24570.2 55.273 275 76 3 401 628 105 379 1.32e-97 304
Msa1088410 AT1G13000.3 60.355 338 107 5 4 328 8 331 1.57e-141 416
Msa1088410 AT1G13000.3 54.800 250 71 2 366 573 49 298 4.31e-86 273
Msa1088410 AT1G24570.1 58.056 360 106 9 17 366 19 343 6.00e-135 400
Msa1088410 AT1G24570.1 55.273 275 76 3 401 628 98 372 7.04e-98 305
Msa1088410 AT4G12840.2 44.816 299 139 9 97 382 76 361 8.31e-78 253
Msa1088410 AT4G12840.2 42.857 224 88 5 413 596 106 329 3.18e-52 185
Msa1088410 AT4G12840.1 44.816 299 139 9 97 382 76 361 1.21e-77 253
Msa1088410 AT4G12840.1 42.857 224 88 5 413 596 106 329 2.93e-52 185
Msa1088410 AT4G12840.3 50.655 229 107 5 160 382 39 267 8.44e-74 239
Msa1088410 AT4G12840.3 42.857 224 88 5 413 596 12 235 1.58e-52 183
Msa1088410 AT1G61240.8 42.123 292 163 5 103 389 15 305 4.35e-70 231
Msa1088410 AT1G61240.8 42.986 221 87 4 415 596 47 267 1.25e-52 185
Msa1088410 AT4G18530.1 45.283 265 132 6 95 351 69 328 6.35e-70 232
Msa1088410 AT4G18530.1 42.466 219 87 5 417 596 110 328 9.73e-51 181
Msa1088410 AT1G11170.3 44.485 272 129 8 103 361 85 347 7.77e-70 231
Msa1088410 AT1G11170.3 42.553 235 96 5 407 602 109 343 1.37e-50 180
Msa1088410 AT4G18530.3 45.283 265 132 6 95 351 64 323 7.96e-70 231
Msa1088410 AT4G18530.3 42.466 219 87 5 417 596 105 323 9.55e-51 181
Msa1088410 AT1G61240.7 43.310 284 154 6 103 381 82 363 2.34e-69 230
Msa1088410 AT1G61240.7 43.379 219 85 4 417 596 116 334 5.09e-52 183
Msa1088410 AT1G61240.4 42.123 292 163 5 103 389 82 372 3.64e-69 231
Msa1088410 AT1G61240.4 42.986 221 87 4 415 596 114 334 9.36e-52 184
Msa1088410 AT1G61240.5 42.123 292 163 5 103 389 82 372 3.64e-69 231
Msa1088410 AT1G61240.5 42.986 221 87 4 415 596 114 334 9.36e-52 184
Msa1088410 AT1G61240.6 42.123 292 163 5 103 389 82 372 3.64e-69 231
Msa1088410 AT1G61240.6 42.986 221 87 4 415 596 114 334 9.36e-52 184
Msa1088410 AT1G61240.2 42.123 292 163 5 103 389 82 372 3.64e-69 231
Msa1088410 AT1G61240.2 42.986 221 87 4 415 596 114 334 9.36e-52 184
Msa1088410 AT1G61240.1 42.123 292 163 5 103 389 82 372 3.64e-69 231
Msa1088410 AT1G61240.1 42.986 221 87 4 415 596 114 334 9.36e-52 184
Msa1088410 AT1G61240.3 42.123 292 163 5 103 389 82 372 3.64e-69 231
Msa1088410 AT1G61240.3 42.986 221 87 4 415 596 114 334 9.36e-52 184
Msa1088410 AT1G11170.1 44.485 272 129 8 103 361 85 347 3.76e-69 231
Msa1088410 AT1G11170.1 42.553 235 96 5 407 602 109 343 6.06e-50 180
Msa1088410 AT1G11170.6 44.485 272 129 8 103 361 85 347 3.76e-69 231
Msa1088410 AT1G11170.6 42.553 235 96 5 407 602 109 343 6.06e-50 180
Msa1088410 AT1G11170.5 44.485 272 129 8 103 361 85 347 3.76e-69 231
Msa1088410 AT1G11170.5 42.553 235 96 5 407 602 109 343 6.06e-50 180
Msa1088410 AT1G11170.7 44.485 272 129 8 103 361 85 347 3.76e-69 231
Msa1088410 AT1G11170.7 42.553 235 96 5 407 602 109 343 6.06e-50 180
Msa1088410 AT1G11170.4 45.038 262 122 8 103 351 85 337 5.89e-69 228
Msa1088410 AT1G11170.4 42.553 235 96 5 407 602 109 343 1.24e-50 179
Msa1088410 AT1G11170.8 45.038 262 122 8 103 351 85 337 5.89e-69 228
Msa1088410 AT1G11170.8 42.553 235 96 5 407 602 109 343 1.24e-50 179
Msa1088410 AT4G18530.2 44.672 244 123 5 95 331 69 307 2.19e-63 212
Msa1088410 AT4G18530.2 50.617 162 75 4 417 573 110 271 6.54e-48 171
Msa1088410 AT1G11170.2 44.813 241 112 7 103 331 85 316 4.80e-62 209
Msa1088410 AT1G11170.2 51.163 172 79 4 407 573 109 280 1.16e-46 168
Msa1088410 AT2G25905.1 72.727 121 32 1 409 528 107 227 8.33e-57 192
Msa1088410 AT2G25905.1 43.460 237 103 6 17 250 19 227 6.69e-49 171
Msa1088410 AT1G11170.9 59.836 122 48 1 407 527 109 230 4.78e-43 155
Msa1088410 AT1G11170.9 42.857 175 84 4 103 269 85 251 1.64e-39 146

Find 183 sgRNAs with CRISPR-Local

Find 741 sgRNAs with CRISPR-GE


CRISPR-Local

CRISPR-Local
sgRNA_sequence on_target_score Position Region
AACGGTTATATACTAAATTT+TGG 0.113972 7_3:-1579671 None:intergenic
AGATCTTGCGGCGTGTTATT+AGG 0.171962 7_3:+1579865 Msa1088410:five_prime_UTR
TGTTGTTCTACTTGTGAAAT+AGG 0.219573 7_3:-1579632 None:intergenic
CTGCGTGTGGCATATGATTC+AGG 0.255286 7_3:+1585919 Msa1088410:CDS
AATTGTAAATGAAGGAATTT+AGG 0.263427 7_3:-1579504 None:intergenic
TCAGAAAAGTTTGGACATAA+TGG 0.271305 7_3:+1582360 Msa1088410:exon
CCAGCTTTAGAACCTCAAAA+AGG 0.272560 7_3:+1590324 Msa1088410:CDS
CATGCTTTCTCACCAGTCTT+AGG 0.278572 7_3:-1585538 None:intergenic
TCTGCACCTCTTGGATTTGA+TGG 0.289728 7_3:-1584204 None:intergenic
CACAAGGTACTTTGGCTTAG+AGG 0.297454 7_3:-1589584 None:intergenic
ATGCAGGTTTGTTGAGATTA+TGG 0.308035 7_3:+1585868 Msa1088410:intron
TGCCATGTCAGCCCATTATT+AGG 0.313286 7_3:-1585590 None:intergenic
TAGCCTGCCCATGAGAAAAT+TGG 0.314625 7_3:+1590944 Msa1088410:intron
TGTAAGATGCAAACCTTAGA+TGG 0.315869 7_3:-1588720 None:intergenic
TAGATGCAGTGAAAGAATTT+AGG 0.320891 7_3:-1579471 None:intergenic
GATCTTGCGGCGTGTTATTA+GGG 0.321600 7_3:+1579866 Msa1088410:five_prime_UTR
TGCAGCATTTGTCGAGATTA+TGG 0.326039 7_3:+1590551 Msa1088410:CDS
CCTGGTCTGGAACCTAATAA+TGG 0.328501 7_3:+1585578 Msa1088410:CDS
TATTGATGCAGCTGTGAAAA+AGG 0.334878 7_3:+1589639 Msa1088410:CDS
CACTTTCATATTCATCTTCA+AGG 0.335016 7_3:-1582769 None:intergenic
TAGATGGATTATTCAGTAAC+TGG 0.338176 7_3:-1588704 None:intergenic
GTTACTGAATAATCCATCTA+AGG 0.344146 7_3:+1588707 Msa1088410:CDS
CAGAAAAGTTTGGACATAAT+GGG 0.346921 7_3:+1582361 Msa1088410:exon
TATTCCCTCGCTAGGGAATC+AGG 0.352487 7_3:+1586264 Msa1088410:CDS
AATATACATCCTACCAAAAC+TGG 0.357195 7_3:+1591529 Msa1088410:three_prime_UTR
ATCATACAATCAGAAAAGTT+TGG 0.375153 7_3:+1582351 Msa1088410:five_prime_UTR
TGGTAGGGAGAATCAAAATC+TGG 0.387875 7_3:+1586380 Msa1088410:intron
GGAGATTTCACAGCCTGGTC+TGG 0.389644 7_3:+1585565 Msa1088410:CDS
ATACTTCTGTTTCATTATGA+TGG 0.394345 7_3:+1584847 Msa1088410:CDS
ACAAGCCTCATACCTTCATT+TGG 0.398393 7_3:-1582515 None:intergenic
TCATGTGGGATGAAGACCTT+GGG 0.405546 7_3:+1590043 Msa1088410:CDS
ACTCATCCCATTCGGTTGTT+CGG 0.405576 7_3:-1589789 None:intergenic
GGTAATCTTTCTGCACCTCT+TGG 0.424385 7_3:-1584213 None:intergenic
GTGTTCGCAAACAGACAAAA+TGG 0.424521 7_3:+1584923 Msa1088410:CDS
TCATATGATGCAACAATGTC+TGG 0.425811 7_3:-1590012 None:intergenic
GATTTGCTCGCTCATAACTA+AGG 0.427980 7_3:+1591401 Msa1088410:CDS
ACCTTGTGACCTTCACTGTT+GGG 0.430384 7_3:+1589599 Msa1088410:CDS
TAATAACACGCCGCAAGATC+TGG 0.430394 7_3:-1579863 None:intergenic
TGCACCTTTGTAGTTAATGA+TGG 0.432825 7_3:-1582590 None:intergenic
GTTGTTCTACTTGTGAAATA+GGG 0.433491 7_3:-1579631 None:intergenic
AAGGATTCTGCTGCTTTGCT+CGG 0.437840 7_3:-1591559 None:intergenic
TATTCCATCACTAGGGGATC+AGG 0.441095 7_3:+1591000 Msa1088410:CDS
CAACTGCAGATACATAAAAC+TGG 0.444624 7_3:+1590272 Msa1088410:intron
TCGTAAGGTGCCACAATGTC+AGG 0.450369 7_3:-1585117 None:intergenic
ATATATATAATGCTCTATCT+AGG 0.450454 7_3:-1591451 None:intergenic
ACTCATCCCATTCAGTTGTT+CGG 0.452555 7_3:-1584870 None:intergenic
CACAAGGTACCTCGGCTTTG+AGG 0.456123 7_3:-1584679 None:intergenic
CTGCATTTGTCAATCTACCT+TGG 0.458934 7_3:-1591340 None:intergenic
CTGGTCTGGAACCTAATAAT+GGG 0.459997 7_3:+1585579 Msa1088410:CDS
GTCTGGATGCAGAAACCTCT+TGG 0.469618 7_3:-1589995 None:intergenic
TTTCACTGAATTTAAACATA+GGG 0.471709 7_3:-1591631 None:intergenic
GTTATTAAATGACACGTTGA+AGG 0.477318 7_3:+1582844 Msa1088410:CDS
TTGGAGTTGTTGATGCTCAA+TGG 0.477545 7_3:+1590963 Msa1088410:CDS
GAAAACCAAATGAAGGTATG+AGG 0.478992 7_3:+1582510 Msa1088410:CDS
TTTATATGGGATGAAGATCT+GGG 0.479328 7_3:+1585147 Msa1088410:CDS
GTGAAGGTCACAAGGTACTT+TGG 0.484389 7_3:-1589592 None:intergenic
GCCGTCCGTGAGACACTGAT+TGG 0.484485 7_3:+1579429 None:intergenic
CCATTATTAGGTTCCAGACC+AGG 0.484663 7_3:-1585578 None:intergenic
AGAGGGTATTTACACTTCCC+TGG 0.486266 7_3:-1590516 None:intergenic
TAAATATTACCTGCGAGTAT+TGG 0.487278 7_3:-1582386 None:intergenic
ATTTCACTGAATTTAAACAT+AGG 0.488847 7_3:-1591632 None:intergenic
AGGAGAGGTGTGGCATGGAA+TGG 0.490387 7_3:+1591309 Msa1088410:CDS
AGAAAATAAAATGAGAATGC+AGG 0.492331 7_3:-1579605 None:intergenic
TAGATTGACAAATGCAGAAA+GGG 0.492604 7_3:+1591346 Msa1088410:CDS
TAGCCGGCCTATGAGAAGAT+AGG 0.493600 7_3:+1586208 Msa1088410:intron
CATCAAAGTATTCCCTCGCT+AGG 0.494743 7_3:+1586256 Msa1088410:CDS
ATGGAAGGAAGCAAGCTAGA+TGG 0.497446 7_3:-1588609 None:intergenic
CTGGGACAGCGCCATGGCAA+GGG 0.497580 7_3:+1586399 Msa1088410:CDS
GAACGACTTGGTCCATGGAT+GGG 0.499192 7_3:+1586063 Msa1088410:intron
AACAACTCCTATCTTCTCAT+AGG 0.500854 7_3:-1586215 None:intergenic
TCTGGGACAGCGCCATGGCA+AGG 0.502429 7_3:+1586398 Msa1088410:CDS
CTTGAAGATGAATATGAAAG+TGG 0.503997 7_3:+1582770 Msa1088410:CDS
AACGACTTGGTCCATGGATG+GGG 0.508505 7_3:+1586064 Msa1088410:CDS
GCATTCGCGGTAGGGATACA+TGG 0.508817 7_3:+1588643 Msa1088410:CDS
GGCCATCGTAATGAAATAGA+AGG 0.512084 7_3:-1589768 None:intergenic
CTAAGACTGGTGAGAAAGCA+TGG 0.512584 7_3:+1585539 Msa1088410:CDS
CGATGGCCGAACAACCGAAT+GGG 0.514342 7_3:+1589783 Msa1088410:CDS
CCACTCAAACTCATCCCATT+CGG 0.515447 7_3:-1589797 None:intergenic
ATTTATCATGCATTCGCGGT+AGG 0.517019 7_3:+1588634 Msa1088410:CDS
GCGAATGCATGATAAATCAA+TGG 0.518814 7_3:-1588628 None:intergenic
AGAACGACTTGGTCCATGGA+TGG 0.519691 7_3:+1586062 Msa1088410:intron
TTCATGTGGGATGAAGACCT+TGG 0.520316 7_3:+1590042 Msa1088410:CDS
ATCAATCGAGGGACGCAGGC+GGG 0.520675 7_3:-1582738 None:intergenic
CACCAAGGTATTCCATCACT+AGG 0.521315 7_3:+1590992 Msa1088410:CDS
ATGATGGCCGAACAACTGAA+TGG 0.523748 7_3:+1584863 Msa1088410:CDS
TACCTTGTGACCTTCACTGT+TGG 0.524452 7_3:+1589598 Msa1088410:CDS
TGAGTTTGAATGGTCGAAGC+AGG 0.524504 7_3:+1584888 Msa1088410:CDS
CTTCAGAACGACTTGGTCCA+TGG 0.525770 7_3:+1586058 Msa1088410:intron
ACCAATAGAAAACCAAATGA+AGG 0.526569 7_3:+1582503 Msa1088410:CDS
TGCGATAATTGAAGCCGAGT+CGG 0.530587 7_3:+1584239 Msa1088410:CDS
TGAGGGTCACTGCACCATCC+TGG 0.532680 7_3:-1585757 None:intergenic
TTGATTAAGTTACCACTCAC+AGG 0.533883 7_3:+1584650 Msa1088410:CDS
TTTATCATGCATTCGCGGTA+GGG 0.536516 7_3:+1588635 Msa1088410:CDS
ATCCTTCTATTTCATTACGA+TGG 0.542035 7_3:+1589766 Msa1088410:CDS
ACCAAGGTATTCCATCACTA+GGG 0.546593 7_3:+1590993 Msa1088410:CDS
ACTGGTGAAGAAGCATGGCT+TGG 0.547308 7_3:+1590290 Msa1088410:CDS
ACTCCTATCTTCTCATAGGC+CGG 0.549614 7_3:-1586211 None:intergenic
GGGTTGGAGATTTCACAGCC+TGG 0.555160 7_3:+1585560 Msa1088410:CDS
ACGATGGCCGAACAACCGAA+TGG 0.557763 7_3:+1589782 Msa1088410:CDS
CTGCACAAGGAGGCAGATGA+GGG 0.560255 7_3:-1585774 None:intergenic
AACCTAATAATGGGCTGACA+TGG 0.561229 7_3:+1585588 Msa1088410:CDS
ATTACCTGATCCCCTAGTGA+TGG 0.561561 7_3:-1591004 None:intergenic
TTGAAACTCTTGGATTGGAG+AGG 0.562409 7_3:+1584600 Msa1088410:CDS
CAAAGTCGAGACCCCATCCA+TGG 0.563627 7_3:-1586075 None:intergenic
GGTAGGGAGAATCAAAATCT+GGG 0.565368 7_3:+1586381 Msa1088410:intron
GCTGCACAAGGAGGCAGATG+AGG 0.566140 7_3:-1585775 None:intergenic
GACTCGGCTTCAATTATCGC+AGG 0.566654 7_3:-1584237 None:intergenic
ACTTTCATATTCATCTTCAA+GGG 0.567401 7_3:-1582768 None:intergenic
GTGAAGCATGGCGCTGCGTG+TGG 0.567420 7_3:+1585906 Msa1088410:CDS
GTTTCTGCATCCTGACATTG+TGG 0.577410 7_3:+1585107 Msa1088410:CDS
CTGAATGGGATGAGTTTGAA+TGG 0.577703 7_3:+1584878 Msa1088410:CDS
TGATGGCCGAACAACTGAAT+GGG 0.581819 7_3:+1584864 Msa1088410:CDS
AAAATGAAATCTGATGATAG+TGG 0.582537 7_3:-1579812 None:intergenic
ATGCATGATAAATCAATGGA+AGG 0.582675 7_3:-1588624 None:intergenic
TTTAGGATAGATACCTCGCT+GGG 0.583143 7_3:-1584291 None:intergenic
CTCTTAGGTGGTATGCTAAG+CGG 0.583946 7_3:+1585085 Msa1088410:intron
ATAAAACTGGTGAAGAAGCA+TGG 0.584590 7_3:+1590285 Msa1088410:CDS
TGCTCTTAGAAAATGTGTTG+AGG 0.587535 7_3:+1586096 Msa1088410:CDS
CAAAATCTGGGACAGCGCCA+TGG 0.589604 7_3:+1586393 Msa1088410:CDS
ATCAAAGTATTCCCTCGCTA+GGG 0.591890 7_3:+1586257 Msa1088410:CDS
AGAGAAACAGAGGAGAAACC+AGG 0.592226 7_3:+1585739 Msa1088410:intron
GGTTAAGGAGAGGTGTGGCA+TGG 0.592433 7_3:+1591304 Msa1088410:intron
ACTGGTGAGAAAGCATGGGT+TGG 0.594876 7_3:+1585544 Msa1088410:CDS
GTAGATTGACAAATGCAGAA+AGG 0.597153 7_3:+1591345 Msa1088410:CDS
GTGGGTGCTTCAGAACGACT+TGG 0.598325 7_3:+1586051 Msa1088410:intron
TGGGACAGCGCCATGGCAAG+GGG 0.601573 7_3:+1586400 Msa1088410:CDS
CAAGTGCAGATACCTAAGAC+TGG 0.601936 7_3:+1585526 Msa1088410:intron
ACCCAACAGTGAAGGTCACA+AGG 0.602730 7_3:-1589600 None:intergenic
ATTGATTTATCATGCATTCG+CGG 0.603280 7_3:+1588630 Msa1088410:CDS
TATTTCTATTAGAGAAACAG+AGG 0.603482 7_3:+1585729 Msa1088410:intron
ACACATCAATCGAGGGACGC+AGG 0.603819 7_3:-1582742 None:intergenic
CTCTTAGGTGGTATGCCAAG+AGG 0.604637 7_3:+1589980 Msa1088410:intron
CATGCTTCACGTGAAAACAC+TGG 0.604813 7_3:-1585893 None:intergenic
CTGTTGATACCCAACAGTGA+AGG 0.608284 7_3:-1589608 None:intergenic
ATTGGTTGCAGGTTAAGGAG+AGG 0.608721 7_3:+1591294 Msa1088410:intron
ATCTCGACAAATGCTGCACA+AGG 0.610292 7_3:-1590546 None:intergenic
ATTTGCTCGCTCATAACTAA+GGG 0.612893 7_3:+1591402 Msa1088410:CDS
GCTGCACAAGGAGGAAGAAG+AGG 0.613830 7_3:-1590534 None:intergenic
ATTCTTCACTATGTGCAAGC+GGG 0.615506 7_3:-1582307 None:intergenic
CTGCACAAGGAGGAAGAAGA+GGG 0.618002 7_3:-1590533 None:intergenic
TTTGTTTGTGAACACTCACA+TGG 0.620605 7_3:-1589834 None:intergenic
TAGGAGTTGTTGATACTCAG+TGG 0.621096 7_3:+1586227 Msa1088410:CDS
AGAAAAGTTTGGACATAATG+GGG 0.621618 7_3:+1582362 Msa1088410:exon
GCGTAACATACCCCTTGCCA+TGG 0.623581 7_3:-1586410 None:intergenic
CGTTAAAATTCTCAACCCCA+AGG 0.623590 7_3:-1590059 None:intergenic
GATGAATATGAAAGTGGCAA+TGG 0.627903 7_3:+1582776 Msa1088410:CDS
AGACATGCACAAGAGAAACC+AGG 0.629863 7_3:+1590498 Msa1088410:intron
TATTCTTCACTATGTGCAAG+CGG 0.630432 7_3:-1582308 None:intergenic
ATTACCTGATTCCCTAGCGA+GGG 0.631510 7_3:-1586268 None:intergenic
CCGAATGGGATGAGTTTGAG+TGG 0.631816 7_3:+1589797 Msa1088410:CDS
ATATCCATCATTAACTACAA+AGG 0.635815 7_3:+1582586 Msa1088410:CDS
TAATGGGGACCAATACTCGC+AGG 0.637799 7_3:+1582377 Msa1088410:exon
CATCAATCGAGGGACGCAGG+CGG 0.640705 7_3:-1582739 None:intergenic
ACTGAGACTTACGCTGCACA+AGG 0.642091 7_3:-1585787 None:intergenic
TTGAGGTTAAATCCTGTGAG+TGG 0.642638 7_3:-1584662 None:intergenic
TTGCAGGTTAAGGAGAGGTG+TGG 0.643279 7_3:+1591299 Msa1088410:intron
TGGCAAATGACAAAGAGAAG+AGG 0.644389 7_3:+1585608 Msa1088410:CDS
GATGAGATAATTGTAAATGA+AGG 0.644781 7_3:-1579512 None:intergenic
TAAGACTGGTGAGAAAGCAT+GGG 0.646168 7_3:+1585540 Msa1088410:CDS
AATATGAAAGTGGCAATGGT+CGG 0.649085 7_3:+1582780 Msa1088410:CDS
AGATTGACAAATGCAGAAAG+GGG 0.653672 7_3:+1591347 Msa1088410:CDS
AAAGAGAAGAGGTGATCGCG+AGG 0.653851 7_3:+1585619 Msa1088410:CDS
GACATGCACAAGAGAAACCA+GGG 0.655147 7_3:+1590499 Msa1088410:intron
CATGTGGGATGAAGACCTTG+GGG 0.658086 7_3:+1590044 Msa1088410:CDS
AAGGGAAGACACATCAATCG+AGG 0.659006 7_3:-1582750 None:intergenic
AATTACCTGATTCCCTAGCG+AGG 0.661301 7_3:-1586269 None:intergenic
AGGGAAGACACATCAATCGA+GGG 0.661938 7_3:-1582749 None:intergenic
AAACAGAGGAGAAACCAGGA+TGG 0.664062 7_3:+1585743 Msa1088410:CDS
ATGGAATGGAGAATGTTCCA+AGG 0.665287 7_3:+1591323 Msa1088410:CDS
TCGGCTTCAATTATCGCAGG+AGG 0.672460 7_3:-1584234 None:intergenic
CCCCTAGTGATGGAATACCT+TGG 0.673648 7_3:-1590994 None:intergenic
CCAAGGTATTCCATCACTAG+GGG 0.674279 7_3:+1590994 Msa1088410:CDS
ACGAATAAGCGATTATGATG+CGG 0.677160 7_3:-1579734 None:intergenic
TTTATGAAGAATAATAGCAG+CGG 0.679676 7_3:+1582806 Msa1088410:CDS
ACGCAAATAAAAGTCCGACT+CGG 0.684493 7_3:-1584253 None:intergenic
AGGATTTAACCTCAAAGCCG+AGG 0.686167 7_3:+1584670 Msa1088410:CDS
GTGTTCACAAACAAACCAAG+TGG 0.686230 7_3:+1589842 Msa1088410:CDS
TGGGTTCCATCAAATCCAAG+AGG 0.698276 7_3:+1584198 Msa1088410:CDS
GATTGACAAATGCAGAAAGG+GGG 0.700784 7_3:+1591348 Msa1088410:CDS
TCGACAAATGCTGCACAAGG+AGG 0.701908 7_3:-1590543 None:intergenic
GAGACTTACGCTGCACAAGG+AGG 0.725042 7_3:-1585784 None:intergenic
GCTCAATGGATTGTTCACCA+AGG 0.733364 7_3:+1590977 Msa1088410:CDS
ATTGTGGGGTGAGCCCAGCG+AGG 0.759305 7_3:+1584278 Msa1088410:CDS

CRISPR-GE

badsite warning sgRNA_sequence Strand Position Region GC_content
!! TATGTTCTAATTAATATATT+TGG + chr7_3:1582113-1582132 Msa1088410:intron 10.0%
!! ATGTTCTAATTAATATATTT+GGG + chr7_3:1582114-1582133 Msa1088410:intron 10.0%
!! ATAGTATGAAAAAAAAATAT+TGG - chr7_3:1582159-1582178 None:intergenic 10.0%
!!! AATATTTTTTTTTCATACTA+TGG + chr7_3:1582158-1582177 Msa1088410:intron 10.0%
!! GTATATTAAAAAAGAAAAAA+GGG - chr7_3:1585956-1585975 None:intergenic 10.0%
!! AGTATATTAAAAAAGAAAAA+AGG - chr7_3:1585957-1585976 None:intergenic 10.0%
!! TATTAAAATAAATATTGCTA+TGG + chr7_3:1587286-1587305 Msa1088410:intron 10.0%
!!! TTTTTAAAAAAACAATATAG+TGG + chr7_3:1587475-1587494 Msa1088410:intron 10.0%
!!! TTTTAAAAAAACAATATAGT+GGG + chr7_3:1587476-1587495 Msa1088410:intron 10.0%
!! AAAAATCTTGAAATATAATA+TGG + chr7_3:1587624-1587643 Msa1088410:intron 10.0%
!! TAAAAAAAAAAAAATTAGCA+AGG - chr7_3:1588579-1588598 None:intergenic 10.0%
!!! TTAGTTTGTAATATTTGAAT+CGG + chr7_3:1579951-1579970 Msa1088410:intron 15.0%
!!! TTTTTATTTATATGGATGTT+TGG - chr7_3:1581584-1581603 None:intergenic 15.0%
!!! GCATTGAATTTTTATTTATA+TGG - chr7_3:1581592-1581611 None:intergenic 15.0%
!! TGTTCTAATTAATATATTTG+GGG + chr7_3:1582115-1582134 Msa1088410:intron 15.0%
!! GAAAAAAAAATATTGGATTT+GGG - chr7_3:1582152-1582171 None:intergenic 15.0%
!! TGAAAAAAAAATATTGGATT+TGG - chr7_3:1582153-1582172 None:intergenic 15.0%
!! AAAATGGTTTAAATAACAAA+AGG - chr7_3:1582194-1582213 None:intergenic 15.0%
!!! ATTCTGTATTTTATAAAACT+GGG + chr7_3:1584114-1584133 Msa1088410:intron 15.0%
!! TATCAAGTATATTTAACAAA+AGG - chr7_3:1584456-1584475 None:intergenic 15.0%
!!! AGCAAAATATTTTTTAAGTT+AGG - chr7_3:1585016-1585035 None:intergenic 15.0%
!!! TTACGACTATATTTTTATAT+GGG + chr7_3:1585134-1585153 Msa1088410:CDS 15.0%
!! GCAAAAAATTAACATATAAT+TGG - chr7_3:1585278-1585297 None:intergenic 15.0%
!!! TGTTGTCTTATAATTTTTTA+TGG + chr7_3:1586018-1586037 Msa1088410:intron 15.0%
!!! CGTATTTTATTTTATCAAAA+GGG + chr7_3:1587913-1587932 Msa1088410:intron 15.0%
!! AGGATACAATAAAAAAAAAT+TGG + chr7_3:1588227-1588246 Msa1088410:intron 15.0%
!!! CATAGTAATTATTTAGTTTA+AGG - chr7_3:1589716-1589735 None:intergenic 15.0%
!! ATTAATCTATTTATTCTCTT+AGG + chr7_3:1589965-1589984 Msa1088410:intron 15.0%
!!! AATGGATGATAATATTTTTA+AGG - chr7_3:1590727-1590746 None:intergenic 15.0%
!! AATTGTAAATGAAGGAATTT+AGG - chr7_3:1579507-1579526 None:intergenic 20.0%
!!! ATTATCTCATCACATTTTTT+AGG + chr7_3:1579524-1579543 Msa1088410:five_prime_UTR 20.0%
!!! TGGAATTAAGTTTTGTTATA+AGG - chr7_3:1579557-1579576 None:intergenic 20.0%
!!! AACGGTTATATACTAAATTT+TGG - chr7_3:1579674-1579693 None:intergenic 20.0%
!!! ATTTAGTATATAACCGTTTT+TGG + chr7_3:1579676-1579695 Msa1088410:five_prime_UTR 20.0%
!!! TTTGGAAACTTCTATTTTAA+CGG - chr7_3:1580307-1580326 None:intergenic 20.0%
!!! AGTCATAAAAAGTAGTTTTT+GGG - chr7_3:1580729-1580748 None:intergenic 20.0%
!!! AAGTCATAAAAAGTAGTTTT+TGG - chr7_3:1580730-1580749 None:intergenic 20.0%
!! TTATGAAGTAAATAGAGATA+TGG + chr7_3:1581933-1581952 Msa1088410:intron 20.0%
!!! CATACTTAATTAGCTAATTT+TGG - chr7_3:1582016-1582035 None:intergenic 20.0%
!! CAAAATTAGCTAATTAAGTA+TGG + chr7_3:1582014-1582033 Msa1088410:intron 20.0%
!!! TTGTTATTTAAACCATTTTC+TGG + chr7_3:1582195-1582214 Msa1088410:intron 20.0%
!!! CAAGATTTTTTATGTAACAT+TGG + chr7_3:1582436-1582455 Msa1088410:intron 20.0%
!! TAATGATTCTTTAATGTTGT+TGG + chr7_3:1582662-1582681 Msa1088410:intron 20.0%
!!! TTTGAAGAATTAGCTTTAAA+TGG + chr7_3:1583108-1583127 Msa1088410:intron 20.0%
!!! AATTAGCTTTAAATGGTTAT+AGG + chr7_3:1583115-1583134 Msa1088410:intron 20.0%
!! GAGAAGAAAAATAAGAATAT+AGG + chr7_3:1583728-1583747 Msa1088410:intron 20.0%
!! AATCATACTCAAAAGTTTAT+AGG - chr7_3:1584097-1584116 None:intergenic 20.0%
!!! GATTCTGTATTTTATAAAAC+TGG + chr7_3:1584113-1584132 Msa1088410:intron 20.0%
!!! ATTTTATAAAACTGGGAAAA+TGG + chr7_3:1584121-1584140 Msa1088410:intron 20.0%
!! CATATAAAAATATAGTCGTA+AGG - chr7_3:1585135-1585154 None:intergenic 20.0%
!!! CTTACGACTATATTTTTATA+TGG + chr7_3:1585133-1585152 Msa1088410:CDS 20.0%
!! TGTTAATCCTTCAAAAAAAA+AGG + chr7_3:1585346-1585365 Msa1088410:intron 20.0%
!! GTCAAAGTTGTTAAATTATT+TGG + chr7_3:1585368-1585387 Msa1088410:intron 20.0%
!! TTCTCTAATAGAAATAAAGA+AGG - chr7_3:1585725-1585744 None:intergenic 20.0%
!! CTAGATAAATTAAAGTAATG+AGG - chr7_3:1586132-1586151 None:intergenic 20.0%
!! GAAAAAACAAATAAGAATCT+TGG - chr7_3:1586354-1586373 None:intergenic 20.0%
!! TACAAATATATATATGCTGA+TGG + chr7_3:1586611-1586630 Msa1088410:intron 20.0%
!! TTTAATTCAACTAATCCTTA+GGG + chr7_3:1586749-1586768 Msa1088410:intron 20.0%
!!! TTTGATTGTAATGTTCTTTT+AGG + chr7_3:1586951-1586970 Msa1088410:intron 20.0%
!!! TTGTGATTTTTTAAATGGTT+TGG - chr7_3:1587083-1587102 None:intergenic 20.0%
!!! TGAACTTGTGATTTTTTAAA+TGG - chr7_3:1587088-1587107 None:intergenic 20.0%
!! TTAAAAAATCACAAGTTCAA+AGG + chr7_3:1587089-1587108 Msa1088410:intron 20.0%
!!! GCGTATTTTATTTTATCAAA+AGG + chr7_3:1587912-1587931 Msa1088410:intron 20.0%
!! AAAAAAAATTGGACATAATG+AGG + chr7_3:1588238-1588257 Msa1088410:intron 20.0%
!! AAAAAAATTGGACATAATGA+GGG + chr7_3:1588239-1588258 Msa1088410:intron 20.0%
!! AGAAGCAAATATTTACTTAA+AGG - chr7_3:1588347-1588366 None:intergenic 20.0%
!! AGTAAATATTTGCTTCTTTA+TGG + chr7_3:1588350-1588369 Msa1088410:intron 20.0%
!! ATATGAATAAAAATTCACTG+AGG - chr7_3:1588522-1588541 None:intergenic 20.0%
!! TCTTACAATATCATTCTTAA+AGG + chr7_3:1588736-1588755 Msa1088410:intron 20.0%
!! AGAATTATATAATTGCAATG+AGG + chr7_3:1588775-1588794 Msa1088410:intron 20.0%
!!! ATCTTAATTTGATGAGTTTA+TGG - chr7_3:1588802-1588821 None:intergenic 20.0%
!!! TATTTTAAAATGACTTGAAC+TGG + chr7_3:1589006-1589025 Msa1088410:intron 20.0%
!!! ATTTTAAAATGACTTGAACT+GGG + chr7_3:1589007-1589026 Msa1088410:intron 20.0%
!! GTAAATAATACTAGTACTAA+TGG - chr7_3:1589927-1589946 None:intergenic 20.0%
!!! ATATGAGTATATTTTCATGT+GGG + chr7_3:1590029-1590048 Msa1088410:CDS 20.0%
!! AAATTTAAAAACCTTCAACA+TGG - chr7_3:1590167-1590186 None:intergenic 20.0%
!! AAAAGAACAATGTTGTTAAA+AGG + chr7_3:1590189-1590208 Msa1088410:intron 20.0%
!!! CTATATTTTCTTCGAATTTA+AGG + chr7_3:1590222-1590241 Msa1088410:intron 20.0%
!!! CAAATGTTTTAATAATGCAA+TGG + chr7_3:1590663-1590682 Msa1088410:intron 20.0%
!! AAAATAGTTTATGTTACGAA+AGG - chr7_3:1591165-1591184 None:intergenic 20.0%
!! TACTAATTAACTATAATCGT+CGG - chr7_3:1591194-1591213 None:intergenic 20.0%
!! TATTTATGTGTATATTTGCA+TGG + chr7_3:1591270-1591289 Msa1088410:intron 20.0%
!! ATATATATAATGCTCTATCT+AGG - chr7_3:1591454-1591473 None:intergenic 20.0%
!! TTTCACTGAATTTAAACATA+GGG - chr7_3:1591634-1591653 None:intergenic 20.0%
!! ATTTCACTGAATTTAAACAT+AGG - chr7_3:1591635-1591654 None:intergenic 20.0%
! GATGAGATAATTGTAAATGA+AGG - chr7_3:1579515-1579534 None:intergenic 25.0%
! AGAAAATAAAATGAGAATGC+AGG - chr7_3:1579608-1579627 None:intergenic 25.0%
! TTTAGAAACAATGCCAAAAA+CGG - chr7_3:1579692-1579711 None:intergenic 25.0%
! AAAATGAAATCTGATGATAG+TGG - chr7_3:1579815-1579834 None:intergenic 25.0%
! TTAGAGCTATTAGTGATTTA+AGG - chr7_3:1581144-1581163 None:intergenic 25.0%
! CTTAAATGCTGAATAATAGA+TGG + chr7_3:1581272-1581291 Msa1088410:intron 25.0%
! AATAATACATGAAAGTGACT+AGG + chr7_3:1581296-1581315 Msa1088410:intron 25.0%
! ATCAACAAAACAAGATGAAT+AGG + chr7_3:1581454-1581473 Msa1088410:intron 25.0%
!! AATATACTGAACAGTTTTTC+AGG - chr7_3:1581491-1581510 None:intergenic 25.0%
! AAGAACTGAACATGTTAAAA+TGG - chr7_3:1582223-1582242 None:intergenic 25.0%
! ATCATACAATCAGAAAAGTT+TGG + chr7_3:1582351-1582370 Msa1088410:five_prime_UTR 25.0%
!! ACTTTTGTTGGAATAGTTTT+TGG + chr7_3:1582545-1582564 Msa1088410:CDS 25.0%
!!! ATAGTTTTTGGCTTCTTAAT+AGG + chr7_3:1582557-1582576 Msa1088410:CDS 25.0%
!!! TAGTTTTTGGCTTCTTAATA+GGG + chr7_3:1582558-1582577 Msa1088410:CDS 25.0%
! ATATCCATCATTAACTACAA+AGG + chr7_3:1582586-1582605 Msa1088410:CDS 25.0%
! AATGTTGTTGGACTTATAAA+TGG + chr7_3:1582674-1582693 Msa1088410:intron 25.0%
! ACTTTCATATTCATCTTCAA+GGG - chr7_3:1582771-1582790 None:intergenic 25.0%
! TTTATGAAGAATAATAGCAG+CGG + chr7_3:1582806-1582825 Msa1088410:CDS 25.0%
! AGCTAATTCTTCAAATCTTA+AGG - chr7_3:1583103-1583122 None:intergenic 25.0%
!!! TCATTTTGCTTTTCTACTTT+TGG - chr7_3:1583636-1583655 None:intergenic 25.0%
! TAAGAAAAAGAAAGGGAAAA+GGG - chr7_3:1583979-1583998 None:intergenic 25.0%
! ATAAGAAAAAGAAAGGGAAA+AGG - chr7_3:1583980-1583999 None:intergenic 25.0%
! ATGAGCATAAGAAAAAGAAA+GGG - chr7_3:1583986-1584005 None:intergenic 25.0%
! TATGAGCATAAGAAAAAGAA+AGG - chr7_3:1583987-1584006 None:intergenic 25.0%
!!! TTCTTTTTTGTAAGCACTAT+TGG + chr7_3:1584067-1584086 Msa1088410:intron 25.0%
! AATATGCAGCAATCATTATT+TGG - chr7_3:1584158-1584177 None:intergenic 25.0%
!!! TTCATTTTTATCTGCAGATT+TGG + chr7_3:1584178-1584197 Msa1088410:intron 25.0%
!!! TCATTTTTATCTGCAGATTT+GGG + chr7_3:1584179-1584198 Msa1088410:intron 25.0%
! ATGCAGTTAAGTACATATTA+AGG + chr7_3:1584362-1584381 Msa1088410:intron 25.0%
!!! AGCTACTAAAACTTGTTAAA+GGG + chr7_3:1584397-1584416 Msa1088410:intron 25.0%
! TTGATTCAATCTTGGATTTA+TGG - chr7_3:1584491-1584510 None:intergenic 25.0%
!!! TGTTATTTTGAACAGTTTTC+AGG + chr7_3:1584814-1584833 Msa1088410:intron 25.0%
!!! GTTATTTTGAACAGTTTTCA+GGG + chr7_3:1584815-1584834 Msa1088410:intron 25.0%
!!! TTATTTTGAACAGTTTTCAG+GGG + chr7_3:1584816-1584835 Msa1088410:intron 25.0%
! ATACTTCTGTTTCATTATGA+TGG + chr7_3:1584847-1584866 Msa1088410:CDS 25.0%
!! TTAAGTTAGGCAAACAATTT+TGG - chr7_3:1585003-1585022 None:intergenic 25.0%
!!! TTTTAATTTAATTGCTGCCA+TGG + chr7_3:1585316-1585335 Msa1088410:intron 25.0%
!!! ACTTTGACCTTTTTTTTTGA+AGG - chr7_3:1585356-1585375 None:intergenic 25.0%
!! TATTTCTATTAGAGAAACAG+AGG + chr7_3:1585729-1585748 Msa1088410:intron 25.0%
! CACAATTATTATATACAGCA+TGG - chr7_3:1585842-1585861 None:intergenic 25.0%
! TCCATGATTATTATTCTTGT+TGG + chr7_3:1586297-1586316 Msa1088410:intron 25.0%
! ACCAACAAGAATAATAATCA+TGG - chr7_3:1586301-1586320 None:intergenic 25.0%
! TGATTATTATTCTTGTTGGT+CGG + chr7_3:1586301-1586320 Msa1088410:intron 25.0%
!!! TTATTTGTTTTTTCGTGCTT+TGG + chr7_3:1586360-1586379 Msa1088410:intron 25.0%
!! TTACGCATTTTCATATAGTT+CGG + chr7_3:1586427-1586446 Msa1088410:intron 25.0%
! ATTAATAAACCAAAGAGACT+AGG - chr7_3:1586461-1586480 None:intergenic 25.0%
! ATTAAACAAATCAATTCCCA+CGG - chr7_3:1586735-1586754 None:intergenic 25.0%
! GTTTAATTCAACTAATCCTT+AGG + chr7_3:1586748-1586767 Msa1088410:intron 25.0%
! TTAATTCAACTAATCCTTAG+GGG + chr7_3:1586750-1586769 Msa1088410:intron 25.0%
!! ACATATTTTTCGTGTGTAAA+TGG - chr7_3:1586815-1586834 None:intergenic 25.0%
! CTGAAAGTAGAATTAAATGT+AGG + chr7_3:1586918-1586937 Msa1088410:intron 25.0%
! TTAATAGTCGTATCCAATTT+GGG - chr7_3:1587002-1587021 None:intergenic 25.0%
! AATCAACTACATACAGTAAA+GGG - chr7_3:1587029-1587048 None:intergenic 25.0%
! AAATCAACTACATACAGTAA+AGG - chr7_3:1587030-1587049 None:intergenic 25.0%
! TTTACTGTATGTAGTTGATT+TGG + chr7_3:1587029-1587048 Msa1088410:intron 25.0%
! TAAATCTCTCGATTGTAAAA+GGG - chr7_3:1587532-1587551 None:intergenic 25.0%
! TTAAATCTCTCGATTGTAAA+AGG - chr7_3:1587533-1587552 None:intergenic 25.0%
! ATCAACGTTCATTATGTTAT+GGG - chr7_3:1587796-1587815 None:intergenic 25.0%
! TATCAACGTTCATTATGTTA+TGG - chr7_3:1587797-1587816 None:intergenic 25.0%
! ATAACATAATGAACGTTGAT+AGG + chr7_3:1587796-1587815 Msa1088410:intron 25.0%
! TCTTTGTGATACAAGAAATA+CGG - chr7_3:1587852-1587871 None:intergenic 25.0%
! GGCACATATTTATTTAATAG+TGG + chr7_3:1587876-1587895 Msa1088410:intron 25.0%
! CAAGAAGAAATATTAAAGCA+TGG - chr7_3:1588096-1588115 None:intergenic 25.0%
!! TGTTCATTTTACAAACATCT+TGG + chr7_3:1588191-1588210 Msa1088410:intron 25.0%
!!! AACATCTTGGTTTTCTTATA+TGG + chr7_3:1588204-1588223 Msa1088410:intron 25.0%
! TAGCATATGCAAAAATTCTT+AGG - chr7_3:1588316-1588335 None:intergenic 25.0%
!! GAAAAACAAATGAAAGTATG+AGG + chr7_3:1588390-1588409 Msa1088410:intron 25.0%
!!! CTTGTTGTGATATTTTTCTT+TGG + chr7_3:1588413-1588432 Msa1088410:intron 25.0%
! ATTATACTAAGCTCCAAAAT+GGG - chr7_3:1588956-1588975 None:intergenic 25.0%
! TATTATACTAAGCTCCAAAA+TGG - chr7_3:1588957-1588976 None:intergenic 25.0%
! ACGGAGAACTTATAAAAATA+AGG + chr7_3:1589352-1589371 Msa1088410:intron 25.0%
! TCAAATAAGTTAATCCAAAC+AGG + chr7_3:1589466-1589485 Msa1088410:intron 25.0%
!! TATGTGCATTTTCAATCTAT+AGG + chr7_3:1589505-1589524 Msa1088410:intron 25.0%
!! TTTATTAAGTTGCTACTTGT+AGG + chr7_3:1589555-1589574 Msa1088410:intron 25.0%
! TAATAACAGAAAACTGAGTT+TGG - chr7_3:1589949-1589968 None:intergenic 25.0%
! AATCTATTTATTCTCTTAGG+TGG + chr7_3:1589968-1589987 Msa1088410:intron 25.0%
!! CATATGAGTATATTTTCATG+TGG + chr7_3:1590028-1590047 Msa1088410:CDS 25.0%
! TGTTTGACTGTTTATTTGTT+TGG + chr7_3:1590465-1590484 Msa1088410:intron 25.0%
! GTGTTACAGTCATAATTTAT+TGG - chr7_3:1590768-1590787 None:intergenic 25.0%
! TTATGACTGTAACACAATAA+TGG + chr7_3:1590773-1590792 Msa1088410:intron 25.0%
TAGATGCAGTGAAAGAATTT+AGG - chr7_3:1579474-1579493 None:intergenic 30.0%
GTTGTTCTACTTGTGAAATA+GGG - chr7_3:1579634-1579653 None:intergenic 30.0%
TGTTGTTCTACTTGTGAAAT+AGG - chr7_3:1579635-1579654 None:intergenic 30.0%
!!! GAATCTTCTCTTTTTGGTTT+GGG - chr7_3:1579715-1579734 None:intergenic 30.0%
TGTGATGTTTACTATGTGAT+TGG + chr7_3:1579976-1579995 Msa1088410:intron 30.0%
TTTGTCAACACAAATTCAAC+TGG - chr7_3:1580217-1580236 None:intergenic 30.0%
TATCAATAACATCAACATGC+AGG + chr7_3:1580278-1580297 Msa1088410:intron 30.0%
TCTTCTCGAAATTGACTATT+TGG - chr7_3:1580325-1580344 None:intergenic 30.0%
AAATGCACTAAGTGTATGTT+TGG + chr7_3:1580409-1580428 Msa1088410:intron 30.0%
AATCACGACAAAACCAAAAT+TGG + chr7_3:1580517-1580536 Msa1088410:intron 30.0%
GTATACACTTAGTATCTGTT+TGG - chr7_3:1580571-1580590 None:intergenic 30.0%
GAAGTGAAGTGATTTATGTT+TGG + chr7_3:1580650-1580669 Msa1088410:intron 30.0%
! TACCCAAATCATGTTTTTCT+GGG + chr7_3:1580804-1580823 Msa1088410:intron 30.0%
! ACTCTTAAACTAGTAGCTTT+TGG - chr7_3:1580935-1580954 None:intergenic 30.0%
TATCTAAACATGCTCTTAGA+CGG + chr7_3:1580989-1581008 Msa1088410:intron 30.0%
GTAGTATAAATATGTGTTGG+TGG - chr7_3:1581051-1581070 None:intergenic 30.0%
CTGGTAGTATAAATATGTGT+TGG - chr7_3:1581054-1581073 None:intergenic 30.0%
CATATTTATACTACCAGTGT+AGG + chr7_3:1581057-1581076 Msa1088410:intron 30.0%
ACAAAACAAGATGAATAGGA+TGG + chr7_3:1581458-1581477 Msa1088410:intron 30.0%
AACTGTTCAGTATATTAGAC+AGG + chr7_3:1581495-1581514 Msa1088410:intron 30.0%
GCAAAAGATCATTCTATTGA+GGG + chr7_3:1581558-1581577 Msa1088410:intron 30.0%
ATTAGTAACTACAGAGCTTT+GGG - chr7_3:1581744-1581763 None:intergenic 30.0%
AAAGCTCTGTAGTTACTAAT+GGG + chr7_3:1581744-1581763 Msa1088410:intron 30.0%
! CTTAGTAACTACAGAGTTTT+GGG - chr7_3:1581777-1581796 None:intergenic 30.0%
! ACTTAGTAACTACAGAGTTT+TGG - chr7_3:1581778-1581797 None:intergenic 30.0%
GTTAAAATGGAACCAGAAAA+TGG - chr7_3:1582210-1582229 None:intergenic 30.0%
! CAGTTCTTTGTATTTTCAAC+AGG + chr7_3:1582235-1582254 Msa1088410:intron 30.0%
TCAGAAAAGTTTGGACATAA+TGG + chr7_3:1582360-1582379 Msa1088410:exon 30.0%
CAGAAAAGTTTGGACATAAT+GGG + chr7_3:1582361-1582380 Msa1088410:exon 30.0%
AGAAAAGTTTGGACATAATG+GGG + chr7_3:1582362-1582381 Msa1088410:exon 30.0%
TAAATATTACCTGCGAGTAT+TGG - chr7_3:1582389-1582408 None:intergenic 30.0%
ACCAATAGAAAACCAAATGA+AGG + chr7_3:1582503-1582522 Msa1088410:CDS 30.0%
!!! ACCTTCATTTGGTTTTCTAT+TGG - chr7_3:1582507-1582526 None:intergenic 30.0%
TAAGTTCACTCAAATGCATA+AGG - chr7_3:1582644-1582663 None:intergenic 30.0%
TGAGATATTCAACTGCAAAT+TGG - chr7_3:1582717-1582736 None:intergenic 30.0%
CACTTTCATATTCATCTTCA+AGG - chr7_3:1582772-1582791 None:intergenic 30.0%
CTTGAAGATGAATATGAAAG+TGG + chr7_3:1582770-1582789 Msa1088410:CDS 30.0%
GTTATTAAATGACACGTTGA+AGG + chr7_3:1582844-1582863 Msa1088410:CDS 30.0%
AATGTTCACAAGAGTAAACA+TGG + chr7_3:1583343-1583362 Msa1088410:intron 30.0%
AGAGATAAATTACTAGGTTG+TGG - chr7_3:1583377-1583396 None:intergenic 30.0%
CATGACAGAGATAAATTACT+AGG - chr7_3:1583383-1583402 None:intergenic 30.0%
TAAGTAAGAATATACTGTCG+TGG + chr7_3:1583603-1583622 Msa1088410:intron 30.0%
! AAGACCTTTTGCTTCTTTTT+GGG + chr7_3:1583686-1583705 Msa1088410:intron 30.0%
ACAAACATGACATACGAATT+CGG - chr7_3:1583884-1583903 None:intergenic 30.0%
AAGAAAAAGAAAGGGAAAAG+GGG - chr7_3:1583978-1583997 None:intergenic 30.0%
!!! ACAGAAGAGAATGTTTTAGT+GGG - chr7_3:1584042-1584061 None:intergenic 30.0%
AGTGCTTACAAAAAAGAACT+GGG - chr7_3:1584065-1584084 None:intergenic 30.0%
TAGTGCTTACAAAAAAGAAC+TGG - chr7_3:1584066-1584085 None:intergenic 30.0%
!! ACTTTTATTTGCGTAGATTG+TGG + chr7_3:1584262-1584281 Msa1088410:CDS 30.0%
!! CTTTTATTTGCGTAGATTGT+GGG + chr7_3:1584263-1584282 Msa1088410:CDS 30.0%
!! TTTTATTTGCGTAGATTGTG+GGG + chr7_3:1584264-1584283 Msa1088410:CDS 30.0%
!! ATAAGCATGTAAGCCATTTT+AGG - chr7_3:1584311-1584330 None:intergenic 30.0%
!! TTAACAAGTTTTAGTAGCTG+TGG - chr7_3:1584396-1584415 None:intergenic 30.0%
!! CAGCTACTAAAACTTGTTAA+AGG + chr7_3:1584396-1584415 Msa1088410:intron 30.0%
!! GCTACTAAAACTTGTTAAAG+GGG + chr7_3:1584398-1584417 Msa1088410:intron 30.0%
AATCCAAGATTGAATCAAGT+TGG + chr7_3:1584493-1584512 Msa1088410:intron 30.0%
!! GAGTTTATGTTTCTGGTATT+AGG + chr7_3:1584571-1584590 Msa1088410:intron 30.0%
!!! TAGGTCAATTTTGAAACTCT+TGG + chr7_3:1584590-1584609 Msa1088410:intron 30.0%
!!! CAATTTTGAAACTCTTGGAT+TGG + chr7_3:1584595-1584614 Msa1088410:CDS 30.0%
! TTTTATATGGGATGAAGATC+TGG + chr7_3:1585146-1585165 Msa1088410:CDS 30.0%
TTTATATGGGATGAAGATCT+GGG + chr7_3:1585147-1585166 Msa1088410:CDS 30.0%
AGGATTAACAAATTTGACCA+TGG - chr7_3:1585336-1585355 None:intergenic 30.0%
AATGAGTAGTTATATGCCTA+AGG + chr7_3:1585453-1585472 Msa1088410:intron 30.0%
GCAGAAGAAAAAAAATCCTT+AGG - chr7_3:1585472-1585491 None:intergenic 30.0%
!!! TTTTTATGGTTTTGACGTTG+TGG + chr7_3:1586032-1586051 Msa1088410:intron 30.0%
!!! TTTTATGGTTTTGACGTTGT+GGG + chr7_3:1586033-1586052 Msa1088410:intron 30.0%
ATCAAGAAGTTGTGTCATAA+TGG + chr7_3:1586554-1586573 Msa1088410:intron 30.0%
! ATTTTTCGTGTGTAAATGGA+AGG - chr7_3:1586811-1586830 None:intergenic 30.0%
AAAAAACAATCCTCTGTGAA+TGG - chr7_3:1586849-1586868 None:intergenic 30.0%
!!! ATTCACAGAGGATTGTTTTT+TGG + chr7_3:1586848-1586867 Msa1088410:intron 30.0%
!!! TTCACAGAGGATTGTTTTTT+GGG + chr7_3:1586849-1586868 Msa1088410:intron 30.0%
CTTAATAGTCGTATCCAATT+TGG - chr7_3:1587003-1587022 None:intergenic 30.0%
!! TGTATGTAGTTGATTTGGAA+CGG + chr7_3:1587034-1587053 Msa1088410:intron 30.0%
AGTTCAAAGGATCCAAAATT+TGG + chr7_3:1587102-1587121 Msa1088410:intron 30.0%
AACTTTAGTGCCAAATGTAT+AGG - chr7_3:1587670-1587689 None:intergenic 30.0%
TCAACGTTCATTATGTTATG+GGG - chr7_3:1587795-1587814 None:intergenic 30.0%
TTCTTGTATCACAAAGAAAG+TGG + chr7_3:1587855-1587874 Msa1088410:intron 30.0%
AATTCCGCAAGTTACTTATA+TGG - chr7_3:1587939-1587958 None:intergenic 30.0%
TACTTCCATTGTTTCAACAT+TGG + chr7_3:1587993-1588012 Msa1088410:intron 30.0%
TATAAGTGTAACACAAGGAA+AGG - chr7_3:1588059-1588078 None:intergenic 30.0%
TCTATCTTCTTTGCACTTTA+AGG + chr7_3:1588160-1588179 Msa1088410:intron 30.0%
!! ATCTTGGTTTTCTTATATGG+AGG + chr7_3:1588207-1588226 Msa1088410:intron 30.0%
! GTTGTGATATTTTTCTTTGG+AGG + chr7_3:1588416-1588435 Msa1088410:intron 30.0%
!! TTTTTCTTTGGAGGATTTCT+TGG + chr7_3:1588425-1588444 Msa1088410:intron 30.0%
GGATTTCTTGGCTTATTTAT+AGG + chr7_3:1588437-1588456 Msa1088410:intron 30.0%
ATGCATGATAAATCAATGGA+AGG - chr7_3:1588627-1588646 None:intergenic 30.0%
! ATTGATTTATCATGCATTCG+CGG + chr7_3:1588630-1588649 Msa1088410:CDS 30.0%
!! TAGATGGATTATTCAGTAAC+TGG - chr7_3:1588707-1588726 None:intergenic 30.0%
GTTACTGAATAATCCATCTA+AGG + chr7_3:1588707-1588726 Msa1088410:CDS 30.0%
!!! AACCTTGTTTTATCCCATTT+TGG + chr7_3:1588940-1588959 Msa1088410:intron 30.0%
!! CAGAAAATTGCCACTTATTT+TGG + chr7_3:1589085-1589104 Msa1088410:intron 30.0%
CAATCAATCACCAAAATAAG+TGG - chr7_3:1589098-1589117 None:intergenic 30.0%
TTGTTTATACTGACCTCATT+GGG - chr7_3:1589220-1589239 None:intergenic 30.0%
!! GTTGTTTTCATAAGCTATCA+CGG + chr7_3:1589333-1589352 Msa1088410:intron 30.0%
AGATTGAAAATGCACATATG+TGG - chr7_3:1589503-1589522 None:intergenic 30.0%
! GACACTTTAACAGTTTTCAA+AGG + chr7_3:1589735-1589754 Msa1088410:intron 30.0%
ATCCTTCTATTTCATTACGA+TGG + chr7_3:1589766-1589785 Msa1088410:CDS 30.0%
CAAATTCAAATAGAAAGCAG+AGG - chr7_3:1589877-1589896 None:intergenic 30.0%
CTCTGCTTTCTATTTGAATT+TGG + chr7_3:1589875-1589894 Msa1088410:intron 30.0%
GATTTCAATATCCATGTTGA+AGG + chr7_3:1590153-1590172 Msa1088410:intron 30.0%
TTCCATGCTTACTCTTTAAA+AGG + chr7_3:1590625-1590644 Msa1088410:intron 30.0%
!! TTCCTTTTAAAGAGTAAGCA+TGG - chr7_3:1590630-1590649 None:intergenic 30.0%
! TTGCAGAATGAATTTGTTCA+TGG + chr7_3:1590799-1590818 Msa1088410:intron 30.0%
! AGAATGAATTTGTTCATGGA+TGG + chr7_3:1590803-1590822 Msa1088410:intron 30.0%
! GAATGAATTTGTTCATGGAT+GGG + chr7_3:1590804-1590823 Msa1088410:intron 30.0%
! AATGAATTTGTTCATGGATG+GGG + chr7_3:1590805-1590824 Msa1088410:intron 30.0%
! AACAACTCCAATTTTCTCAT+GGG - chr7_3:1590954-1590973 None:intergenic 30.0%
TGTGTATATTTGCATGGTAT+TGG + chr7_3:1591276-1591295 Msa1088410:intron 30.0%
TAGATTGACAAATGCAGAAA+GGG + chr7_3:1591346-1591365 Msa1088410:CDS 30.0%
AATATACATCCTACCAAAAC+TGG + chr7_3:1591529-1591548 Msa1088410:three_prime_UTR 30.0%
!!! GGAATCTTCTCTTTTTGGTT+TGG - chr7_3:1579716-1579735 None:intergenic 35.0%
ACGAATAAGCGATTATGATG+CGG - chr7_3:1579737-1579756 None:intergenic 35.0%
! GTTTACTATGTGATTGGTTG+TGG + chr7_3:1579982-1580001 Msa1088410:intron 35.0%
ATTGGTTGTGGAGTGTATTT+GGG + chr7_3:1579994-1580013 Msa1088410:intron 35.0%
CAAGCTTAAAGACACGAATT+CGG - chr7_3:1580243-1580262 None:intergenic 35.0%
CACTTAGTATCTGTTTGGTT+TGG - chr7_3:1580566-1580585 None:intergenic 35.0%
TATGACTTCTAGTCAAAACG+AGG + chr7_3:1580742-1580761 Msa1088410:intron 35.0%
! CAGAAAAACATGATTTGGGT+AGG - chr7_3:1580805-1580824 None:intergenic 35.0%
! CTACCCAAATCATGTTTTTC+TGG + chr7_3:1580803-1580822 Msa1088410:intron 35.0%
! ACCCAAATCATGTTTTTCTG+GGG + chr7_3:1580805-1580824 Msa1088410:intron 35.0%
TCCCCAGAAAAACATGATTT+GGG - chr7_3:1580809-1580828 None:intergenic 35.0%
TTCCCCAGAAAAACATGATT+TGG - chr7_3:1580810-1580829 None:intergenic 35.0%
ATTTGAACACACTGCATGTT+TGG - chr7_3:1580862-1580881 None:intergenic 35.0%
ATGCAGTGTGTTCAAATTCT+GGG + chr7_3:1580865-1580884 Msa1088410:intron 35.0%
GTTGAAATTGGGTGAAATCA+TGG + chr7_3:1580904-1580923 Msa1088410:intron 35.0%
CAATAGTATTTGACCTACAC+TGG - chr7_3:1581073-1581092 None:intergenic 35.0%
TATTAGCAATCCTATTGAGC+TGG - chr7_3:1581115-1581134 None:intergenic 35.0%
! CTTCAGCACTACATACTTTT+TGG - chr7_3:1581374-1581393 None:intergenic 35.0%
AGACATTAGTAGGAATACAG+AGG + chr7_3:1581394-1581413 Msa1088410:intron 35.0%
CCAGAAGTTATTCAGTGTTT+AGG - chr7_3:1581431-1581450 None:intergenic 35.0%
CCTAAACACTGAATAACTTC+TGG + chr7_3:1581428-1581447 Msa1088410:intron 35.0%
!!! ATACTGAACAGTTTTTCAGG+TGG - chr7_3:1581488-1581507 None:intergenic 35.0%
TTAGAAAAGCAGATGTATCC+TGG + chr7_3:1581536-1581555 Msa1088410:intron 35.0%
! CAATAGAATGATCTTTTGCC+AGG - chr7_3:1581557-1581576 None:intergenic 35.0%
GGCAAAAGATCATTCTATTG+AGG + chr7_3:1581557-1581576 Msa1088410:intron 35.0%
!! AACTTCGTAAACTAGTCTTG+TGG - chr7_3:1581677-1581696 None:intergenic 35.0%
ACGAAGTTAATGTCATCTTG+AGG + chr7_3:1581689-1581708 Msa1088410:intron 35.0%
AGTTAATGTCATCTTGAGGT+TGG + chr7_3:1581693-1581712 Msa1088410:intron 35.0%
TGGGATAAATTCCCAGTAAT+TGG - chr7_3:1581725-1581744 None:intergenic 35.0%
CATTAGTAACTACAGAGCTT+TGG - chr7_3:1581745-1581764 None:intergenic 35.0%
CAAAGCTCTGTAGTTACTAA+TGG + chr7_3:1581743-1581762 Msa1088410:intron 35.0%
TGTTCTGTAGATAATCTTCC+AGG - chr7_3:1581895-1581914 None:intergenic 35.0%
ACTTCATAACTTCGTGCATA+GGG - chr7_3:1581922-1581941 None:intergenic 35.0%
TACTTCATAACTTCGTGCAT+AGG - chr7_3:1581923-1581942 None:intergenic 35.0%
TTAAGTATGGAGTACAGTAC+AGG + chr7_3:1582027-1582046 Msa1088410:intron 35.0%
TATTCTTCACTATGTGCAAG+CGG - chr7_3:1582311-1582330 None:intergenic 35.0%
! GAAAACCAAATGAAGGTATG+AGG + chr7_3:1582510-1582529 Msa1088410:CDS 35.0%
! CTTGTTCTGACAACTTTTGT+TGG + chr7_3:1582533-1582552 Msa1088410:CDS 35.0%
TGCACCTTTGTAGTTAATGA+TGG - chr7_3:1582593-1582612 None:intergenic 35.0%
GATGAATATGAAAGTGGCAA+TGG + chr7_3:1582776-1582795 Msa1088410:CDS 35.0%
AATATGAAAGTGGCAATGGT+CGG + chr7_3:1582780-1582799 Msa1088410:CDS 35.0%
TCCATGCACTTATTGAACAA+AGG + chr7_3:1582995-1583014 Msa1088410:intron 35.0%
TCCTTTGTTCAATAAGTGCA+TGG - chr7_3:1582999-1583018 None:intergenic 35.0%
ATGCACTTATTGAACAAAGG+AGG + chr7_3:1582998-1583017 Msa1088410:intron 35.0%
TGCACTTATTGAACAAAGGA+GGG + chr7_3:1582999-1583018 Msa1088410:intron 35.0%
!! AGCTTTAAATGGTTATAGGC+TGG + chr7_3:1583119-1583138 Msa1088410:intron 35.0%
AGCGAAAATTGAACTTCTCA+GGG + chr7_3:1583170-1583189 Msa1088410:intron 35.0%
! GAAGACCTTTTGCTTCTTTT+TGG + chr7_3:1583685-1583704 Msa1088410:intron 35.0%
! AGACCTTTTGCTTCTTTTTG+GGG + chr7_3:1583687-1583706 Msa1088410:intron 35.0%
AGTTAGAATTTGGGGAAGAT+AGG - chr7_3:1583924-1583943 None:intergenic 35.0%
TGACAGTCAGTTAGAATTTG+GGG - chr7_3:1583932-1583951 None:intergenic 35.0%
CTGACAGTCAGTTAGAATTT+GGG - chr7_3:1583933-1583952 None:intergenic 35.0%
TGCTCATAGACTCCAAATTA+TGG + chr7_3:1583999-1584018 Msa1088410:intron 35.0%
GCTCATAGACTCCAAATTAT+GGG + chr7_3:1584000-1584019 Msa1088410:intron 35.0%
AGCATGATAAGCCCATAATT+TGG - chr7_3:1584014-1584033 None:intergenic 35.0%
!! GACAGAAGAGAATGTTTTAG+TGG - chr7_3:1584043-1584062 None:intergenic 35.0%
! TTTTAGTAGCTGTGGAAACA+AGG - chr7_3:1584388-1584407 None:intergenic 35.0%
CTTCCAACTTGATTCAATCT+TGG - chr7_3:1584499-1584518 None:intergenic 35.0%
! ACAGAAGAGCACATATTGTA+GGG - chr7_3:1584543-1584562 None:intergenic 35.0%
! AACAGAAGAGCACATATTGT+AGG - chr7_3:1584544-1584563 None:intergenic 35.0%
CTAGCTTGAGTTTATGTTTC+TGG + chr7_3:1584564-1584583 Msa1088410:intron 35.0%
TTGATTAAGTTACCACTCAC+AGG + chr7_3:1584650-1584669 Msa1088410:CDS 35.0%
TATTGATGCAGCTGTGAAAA+AGG + chr7_3:1584734-1584753 Msa1088410:intron 35.0%
CCATATTCATGTTCAAGCAA+TGG - chr7_3:1584956-1584975 None:intergenic 35.0%
CCATTGCTTGAACATGAATA+TGG + chr7_3:1584953-1584972 Msa1088410:intron 35.0%
! AGTTAGGCAAACAATTTTGG+TGG - chr7_3:1585000-1585019 None:intergenic 35.0%
! AGTTGATTGTTTTCCCTCTT+AGG + chr7_3:1585070-1585089 Msa1088410:intron 35.0%
!! TGTTGAGCATTTTAATGCAG+AGG + chr7_3:1585170-1585189 Msa1088410:CDS 35.0%
!!! TCTTCTGCTTTTTCTCACAA+AGG + chr7_3:1585484-1585503 Msa1088410:intron 35.0%
AGGTATCTGCACTTGAAATT+AGG - chr7_3:1585521-1585540 None:intergenic 35.0%
AATAATTGTGCTATGCATGC+AGG + chr7_3:1585852-1585871 Msa1088410:intron 35.0%
!! ATGCAGGTTTGTTGAGATTA+TGG + chr7_3:1585868-1585887 Msa1088410:intron 35.0%
TGCTCTTAGAAAATGTGTTG+AGG + chr7_3:1586096-1586115 Msa1088410:CDS 35.0%
AACAACTCCTATCTTCTCAT+AGG - chr7_3:1586218-1586237 None:intergenic 35.0%
!!! TTGTTTTTTCGTGCTTTGGT+AGG + chr7_3:1586364-1586383 Msa1088410:intron 35.0%
!!! TGTTTTTTCGTGCTTTGGTA+GGG + chr7_3:1586365-1586384 Msa1088410:intron 35.0%
CAAGCAAAATATCAGATGGA+GGG - chr7_3:1586498-1586517 None:intergenic 35.0%
CAAGCAAGCAAAATATCAGA+TGG - chr7_3:1586502-1586521 None:intergenic 35.0%
AAATGCATATTACAAAGCCG+TGG + chr7_3:1586715-1586734 Msa1088410:intron 35.0%
AATGCATATTACAAAGCCGT+GGG + chr7_3:1586716-1586735 Msa1088410:intron 35.0%
TTTGGGTCATATAGTAGCTA+AGG + chr7_3:1586866-1586885 Msa1088410:intron 35.0%
AGGACAAAATAACACCATGT+AGG + chr7_3:1586886-1586905 Msa1088410:intron 35.0%
TATCCAATTTGGGTATTACC+AGG - chr7_3:1586992-1587011 None:intergenic 35.0%
!! AGTTGATTTGGAACGGTATA+TGG + chr7_3:1587041-1587060 Msa1088410:intron 35.0%
! TATATGGAGCATTACCAACT+TGG + chr7_3:1587057-1587076 Msa1088410:intron 35.0%
! TTTAAATGGTTTGGCCAAGT+TGG - chr7_3:1587074-1587093 None:intergenic 35.0%
!! ATCCAAAATTTGGTGTCGAA+TGG + chr7_3:1587112-1587131 Msa1088410:intron 35.0%
! AACCATTCGACACCAAATTT+TGG - chr7_3:1587117-1587136 None:intergenic 35.0%
!! AAAATTTGGTGTCGAATGGT+TGG + chr7_3:1587116-1587135 Msa1088410:intron 35.0%
! GTCACTAGACACAATCTTTT+GGG + chr7_3:1587147-1587166 Msa1088410:intron 35.0%
! TAATATGGCATCTAAGACTG+TGG + chr7_3:1587639-1587658 Msa1088410:intron 35.0%
TGTGGTCAAACCTATACATT+TGG + chr7_3:1587657-1587676 Msa1088410:intron 35.0%
!! ATTTAATAGTGGATACCACG+CGG + chr7_3:1587887-1587906 Msa1088410:intron 35.0%
! AAGTAACTTGCGGAATTGTT+AGG + chr7_3:1587942-1587961 Msa1088410:intron 35.0%
! AGTAACTTGCGGAATTGTTA+GGG + chr7_3:1587943-1587962 Msa1088410:intron 35.0%
AGCAACCAATGTTGAAACAA+TGG - chr7_3:1588001-1588020 None:intergenic 35.0%
GAGGTTATAAGTGTAACACA+AGG - chr7_3:1588064-1588083 None:intergenic 35.0%
TAAAGCATGGTAGAAAGAAG+AGG - chr7_3:1588083-1588102 None:intergenic 35.0%
! ATCTTCTTTGCACTTTAAGG+AGG + chr7_3:1588163-1588182 Msa1088410:intron 35.0%
!! CCTTTGTTGTTGAGAATGTT+GGG - chr7_3:1588472-1588491 None:intergenic 35.0%
!! ACCTTTGTTGTTGAGAATGT+TGG - chr7_3:1588473-1588492 None:intergenic 35.0%
GCGAATGCATGATAAATCAA+TGG - chr7_3:1588631-1588650 None:intergenic 35.0%
TGTAAGATGCAAACCTTAGA+TGG - chr7_3:1588723-1588742 None:intergenic 35.0%
! TGGGATAAAACAAGGTTTTG+AGG - chr7_3:1588937-1588956 None:intergenic 35.0%
CTCCAAAATGGGATAAAACA+AGG - chr7_3:1588945-1588964 None:intergenic 35.0%
! TTGGTGATTGATTGCAGATT+TGG + chr7_3:1589104-1589123 Msa1088410:intron 35.0%
TGGTGATTGATTGCAGATTT+GGG + chr7_3:1589105-1589124 Msa1088410:intron 35.0%
CTTGTTTATACTGACCTCAT+TGG - chr7_3:1589221-1589240 None:intergenic 35.0%
ATAAGGTCAAAGAAGCTTAC+AGG + chr7_3:1589369-1589388 Msa1088410:intron 35.0%
AGTCTGTTTGAGAGAGTTTA+TGG - chr7_3:1589420-1589439 None:intergenic 35.0%
TATTGATGCAGCTGTGAAAA+AGG + chr7_3:1584734-1584753 Msa1088410:intron 35.0%
TTTGTTTGTGAACACTCACA+TGG - chr7_3:1589837-1589856 None:intergenic 35.0%
CAGAGGATTTATTTACCACT+TGG - chr7_3:1589860-1589879 None:intergenic 35.0%
TCATATGATGCAACAATGTC+TGG - chr7_3:1590015-1590034 None:intergenic 35.0%
!! CAGTTTTATGTATCTGCAGT+TGG - chr7_3:1590274-1590293 None:intergenic 35.0%
CAACTGCAGATACATAAAAC+TGG + chr7_3:1590272-1590291 Msa1088410:intron 35.0%
ATAAAACTGGTGAAGAAGCA+TGG + chr7_3:1590285-1590304 Msa1088410:CDS 35.0%
!! CAGCTTTAGAACCTCAAAAA+GGG + chr7_3:1590325-1590344 Msa1088410:CDS 35.0%
! AACCTCAAAAAGGGTTGATT+TGG + chr7_3:1590334-1590353 Msa1088410:CDS 35.0%
! TTCCAAATCAACCCTTTTTG+AGG - chr7_3:1590339-1590358 None:intergenic 35.0%
CATCCATTAGCTGTTTATGA+TGG + chr7_3:1590739-1590758 Msa1088410:intron 35.0%
AAGCCATCATAAACAGCTAA+TGG - chr7_3:1590745-1590764 None:intergenic 35.0%
! CAACAACTCCAATTTTCTCA+TGG - chr7_3:1590955-1590974 None:intergenic 35.0%
GTAGATTGACAAATGCAGAA+AGG + chr7_3:1591345-1591364 Msa1088410:CDS 35.0%
AGATTGACAAATGCAGAAAG+GGG + chr7_3:1591347-1591366 Msa1088410:CDS 35.0%
ATTTGCTCGCTCATAACTAA+GGG + chr7_3:1591402-1591421 Msa1088410:CDS 35.0%
! GATGCGGAATCTTCTCTTTT+TGG - chr7_3:1579721-1579740 None:intergenic 40.0%
!! CGTGTTATTAGGGCTTTTTC+AGG + chr7_3:1579876-1579895 Msa1088410:five_prime_UTR 40.0%
! GATTGGTTGTGGAGTGTATT+TGG + chr7_3:1579993-1580012 Msa1088410:intron 40.0%
!!! ATGTTTGGTTTTGCGTTGAC+TGG + chr7_3:1580424-1580443 Msa1088410:intron 40.0%
! AGCTTCGTTTTGTAGCTTCT+AGG + chr7_3:1580493-1580512 Msa1088410:intron 40.0%
! CTCAAACGCACATCCAATTT+TGG - chr7_3:1580533-1580552 None:intergenic 40.0%
!! TATCTGTTTGGTTTGGCGTT+CGG - chr7_3:1580559-1580578 None:intergenic 40.0%
CTTCTAGTCAAAACGAGGTT+TGG + chr7_3:1580747-1580766 Msa1088410:intron 40.0%
CATGCAGTGTGTTCAAATTC+TGG + chr7_3:1580864-1580883 Msa1088410:intron 40.0%
TGCAGTGTGTTCAAATTCTG+GGG + chr7_3:1580866-1580885 Msa1088410:intron 40.0%
ACTTAGCACGCGTTGAAATT+GGG + chr7_3:1580893-1580912 Msa1088410:intron 40.0%
AGTAATGTGTTCCTTTCACC+AGG - chr7_3:1580969-1580988 None:intergenic 40.0%
ACATGCTCTTAGACGGAAAA+AGG + chr7_3:1580996-1581015 Msa1088410:intron 40.0%
! GAATAGTGCTGAATAGATGC+TGG + chr7_3:1581172-1581191 Msa1088410:intron 40.0%
AGCACTTTGAACTGCTCTTT+AGG - chr7_3:1581330-1581349 None:intergenic 40.0%
! AGTGCTGAAGAGACATTAGT+AGG + chr7_3:1581384-1581403 Msa1088410:intron 40.0%
GTTGGACATAGCCAATTACT+GGG + chr7_3:1581711-1581730 Msa1088410:intron 40.0%
CTAAGTTAGCAGTAGCACAA+TGG + chr7_3:1581792-1581811 Msa1088410:intron 40.0%
! GTCAGTTGTCGCTTATTGTT+TGG - chr7_3:1581870-1581889 None:intergenic 40.0%
AACATAGTGCCTATCTCAAG+GGG - chr7_3:1581975-1581994 None:intergenic 40.0%
CAACATAGTGCCTATCTCAA+GGG - chr7_3:1581976-1581995 None:intergenic 40.0%
TCAACATAGTGCCTATCTCA+AGG - chr7_3:1581977-1581996 None:intergenic 40.0%
TGAGATAGGCACTATGTTGA+AGG + chr7_3:1581977-1581996 Msa1088410:intron 40.0%
ACTATTAGTAGTAGCCCCTT+GGG - chr7_3:1582067-1582086 None:intergenic 40.0%
AACTATTAGTAGTAGCCCCT+TGG - chr7_3:1582068-1582087 None:intergenic 40.0%
! CATCTTTTGCTCTTCTACAG+AGG + chr7_3:1582278-1582297 Msa1088410:five_prime_UTR 40.0%
ATTCTTCACTATGTGCAAGC+GGG - chr7_3:1582310-1582329 None:intergenic 40.0%
ACAAGCCTCATACCTTCATT+TGG - chr7_3:1582518-1582537 None:intergenic 40.0%
! TAACTACAAAGGTGCAGACT+TGG + chr7_3:1582597-1582616 Msa1088410:intron 40.0%
TGAACGACATGAAAGGTTAC+TGG + chr7_3:1582892-1582911 Msa1088410:intron 40.0%
GAACGACATGAAAGGTTACT+GGG + chr7_3:1582893-1582912 Msa1088410:intron 40.0%
AACGCGTTCTTTCATTGAGA+AGG + chr7_3:1582928-1582947 Msa1088410:intron 40.0%
ACGCGTTCTTTCATTGAGAA+GGG + chr7_3:1582929-1582948 Msa1088410:intron 40.0%
GAGCGAAAATTGAACTTCTC+AGG + chr7_3:1583169-1583188 Msa1088410:intron 40.0%
TTCACAAGAGTAAACATGGC+AGG + chr7_3:1583347-1583366 Msa1088410:intron 40.0%
CATCCCCAAAAAGAAGCAAA+AGG - chr7_3:1583693-1583712 None:intergenic 40.0%
!! CTTTTGCTTCTTTTTGGGGA+TGG + chr7_3:1583691-1583710 Msa1088410:intron 40.0%
GGCTCAGGTTATCTATTGTA+GGG - chr7_3:1583807-1583826 None:intergenic 40.0%
TGGCTCAGGTTATCTATTGT+AGG - chr7_3:1583808-1583827 None:intergenic 40.0%
TATTTCTTCTCCGAGGAGAA+TGG - chr7_3:1583828-1583847 None:intergenic 40.0%
!! GAAAGAGTATTTCTTCTCCG+AGG - chr7_3:1583835-1583854 None:intergenic 40.0%
GCTGACAGTCAGTTAGAATT+TGG - chr7_3:1583934-1583953 None:intergenic 40.0%
ATTCTAACTGACTGTCAGCT+AGG + chr7_3:1583935-1583954 Msa1088410:intron 40.0%
ACGCAAATAAAAGTCCGACT+CGG - chr7_3:1584256-1584275 None:intergenic 40.0%
! TTTAGGATAGATACCTCGCT+GGG - chr7_3:1584294-1584313 None:intergenic 40.0%
!!! TTTTAGGATAGATACCTCGC+TGG - chr7_3:1584295-1584314 None:intergenic 40.0%
! GCGAGGTATCTATCCTAAAA+TGG + chr7_3:1584295-1584314 Msa1088410:intron 40.0%
!! AATCAAGTTGGAAGAGACTG+TGG + chr7_3:1584505-1584524 Msa1088410:intron 40.0%
! TTGAAACTCTTGGATTGGAG+AGG + chr7_3:1584600-1584619 Msa1088410:CDS 40.0%
TTGAGGTTAAATCCTGTGAG+TGG - chr7_3:1584665-1584684 None:intergenic 40.0%
ACTCATCCCATTCAGTTGTT+CGG - chr7_3:1584873-1584892 None:intergenic 40.0%
CTGAATGGGATGAGTTTGAA+TGG + chr7_3:1584878-1584897 Msa1088410:CDS 40.0%
GTGTTCGCAAACAGACAAAA+TGG + chr7_3:1584923-1584942 Msa1088410:CDS 40.0%
! TGATTGTTTTCCCTCTTAGG+TGG + chr7_3:1585073-1585092 Msa1088410:intron 40.0%
! TAAGACTGGTGAGAAAGCAT+GGG + chr7_3:1585540-1585559 Msa1088410:CDS 40.0%
! CTGGTCTGGAACCTAATAAT+GGG + chr7_3:1585579-1585598 Msa1088410:CDS 40.0%
!! AACCTAATAATGGGCTGACA+TGG + chr7_3:1585588-1585607 Msa1088410:CDS 40.0%
TGGCAAATGACAAAGAGAAG+AGG + chr7_3:1585608-1585627 Msa1088410:CDS 40.0%
ATTCAATCCCCACTTTCTTC+TGG + chr7_3:1585664-1585683 Msa1088410:intron 40.0%
AACAAGCACCAGAAGAAAGT+GGG - chr7_3:1585675-1585694 None:intergenic 40.0%
TAACAAGCACCAGAAGAAAG+TGG - chr7_3:1585676-1585695 None:intergenic 40.0%
! TGGCATATGATTCAGGTTTG+AGG + chr7_3:1585926-1585945 Msa1088410:intron 40.0%
TAGGAGTTGTTGATACTCAG+TGG + chr7_3:1586227-1586246 Msa1088410:CDS 40.0%
! ATCAAAGTATTCCCTCGCTA+GGG + chr7_3:1586257-1586276 Msa1088410:CDS 40.0%
TGGTAGGGAGAATCAAAATC+TGG + chr7_3:1586380-1586399 Msa1088410:intron 40.0%
GGTAGGGAGAATCAAAATCT+GGG + chr7_3:1586381-1586400 Msa1088410:intron 40.0%
GCAAGCAAAATATCAGATGG+AGG - chr7_3:1586499-1586518 None:intergenic 40.0%
! TTTAAACGCTGTTGATTGCC+AGG + chr7_3:1586634-1586653 Msa1088410:intron 40.0%
TGTGTAAATGGAAGGCAATG+TGG - chr7_3:1586803-1586822 None:intergenic 40.0%
TTCATACACTCCATTCACAG+AGG + chr7_3:1586836-1586855 Msa1088410:intron 40.0%
!! TTCAGCTCTGAAATCCTACA+TGG - chr7_3:1586903-1586922 None:intergenic 40.0%
ATGCCTGGTAATACCCAAAT+TGG + chr7_3:1586986-1587005 Msa1088410:intron 40.0%
! GGTCACTAGACACAATCTTT+TGG + chr7_3:1587146-1587165 Msa1088410:intron 40.0%
TATTGCTATGGAAGTCAACC+AGG + chr7_3:1587298-1587317 Msa1088410:intron 40.0%
TTGACTTCTCTCAAAGAACC+TGG - chr7_3:1587319-1587338 None:intergenic 40.0%
! GGTTCTTTGAGAGAAGTCAA+CGG + chr7_3:1587319-1587338 Msa1088410:intron 40.0%
! GTTCTTTGAGAGAAGTCAAC+GGG + chr7_3:1587320-1587339 Msa1088410:intron 40.0%
! TTCTTTGAGAGAAGTCAACG+GGG + chr7_3:1587321-1587340 Msa1088410:intron 40.0%
TGAGCAACATTGAAGCAAAC+AGG - chr7_3:1587357-1587376 None:intergenic 40.0%
GTTTGCTTCAATGTTGCTCA+AGG + chr7_3:1587357-1587376 Msa1088410:intron 40.0%
! TCACTTGGGAGTCTTATATC+AGG + chr7_3:1587398-1587417 Msa1088410:intron 40.0%
! AGTCTTATATCAGGTTGCTG+TGG + chr7_3:1587407-1587426 Msa1088410:intron 40.0%
! TATATCAGGTTGCTGTGGAA+AGG + chr7_3:1587412-1587431 Msa1088410:intron 40.0%
AAATAAAATACGCAACCGCG+TGG - chr7_3:1587905-1587924 None:intergenic 40.0%
AGGGCCATATAAGTAACTTG+CGG + chr7_3:1587932-1587951 Msa1088410:intron 40.0%
! GTAACTTGCGGAATTGTTAG+GGG + chr7_3:1587944-1587963 Msa1088410:intron 40.0%
! TAACTTGCGGAATTGTTAGG+GGG + chr7_3:1587945-1587964 Msa1088410:intron 40.0%
GTGTAACACAAGGAAAGGAA+AGG - chr7_3:1588054-1588073 None:intergenic 40.0%
TAATGAGGGAAGTTACTCAC+AGG + chr7_3:1588253-1588272 Msa1088410:intron 40.0%
CCCAACATTCTCAACAACAA+AGG + chr7_3:1588469-1588488 Msa1088410:intron 40.0%
ATTTATCATGCATTCGCGGT+AGG + chr7_3:1588634-1588653 Msa1088410:CDS 40.0%
TTTATCATGCATTCGCGGTA+GGG + chr7_3:1588635-1588654 Msa1088410:CDS 40.0%
GATTGAGCATTAACAATCCC+AGG - chr7_3:1589166-1589185 None:intergenic 40.0%
AAGCTTACAGGCATGTCATA+AGG + chr7_3:1589381-1589400 Msa1088410:intron 40.0%
AGATAGAGAGAGTGAGAAAG+AGG - chr7_3:1589666-1589685 None:intergenic 40.0%
CACTCTCTCTATCTTTGCAT+AGG + chr7_3:1589672-1589691 Msa1088410:intron 40.0%
GGCCATCGTAATGAAATAGA+AGG - chr7_3:1589771-1589790 None:intergenic 40.0%
GTGTTCACAAACAAACCAAG+TGG + chr7_3:1589842-1589861 Msa1088410:CDS 40.0%
CGTTAAAATTCTCAACCCCA+AGG - chr7_3:1590062-1590081 None:intergenic 40.0%
!!! CCTTTTTGAGGTTCTAAAGC+TGG - chr7_3:1590327-1590346 None:intergenic 40.0%
!! CCAGCTTTAGAACCTCAAAA+AGG + chr7_3:1590324-1590343 Msa1088410:CDS 40.0%
TGCAGCATTTGTCGAGATTA+TGG + chr7_3:1590551-1590570 Msa1088410:CDS 40.0%
!! TGCTTTTAGAAAATGCGTCG+AGG + chr7_3:1590837-1590856 Msa1088410:intron 40.0%
TTGGAGTTGTTGATGCTCAA+TGG + chr7_3:1590963-1590982 Msa1088410:CDS 40.0%
! ACCAAGGTATTCCATCACTA+GGG + chr7_3:1590993-1591012 Msa1088410:CDS 40.0%
! TGTTTTCCTTTGCGCTTGAT+AGG + chr7_3:1591092-1591111 Msa1088410:intron 40.0%
! GTTTTCCTTTGCGCTTGATA+GGG + chr7_3:1591093-1591112 Msa1088410:intron 40.0%
!! ATTTGCATGGTATTGGTTGC+AGG + chr7_3:1591283-1591302 Msa1088410:intron 40.0%
!! ATGGTATTGGTTGCAGGTTA+AGG + chr7_3:1591289-1591308 Msa1088410:intron 40.0%
ATGGAATGGAGAATGTTCCA+AGG + chr7_3:1591323-1591342 Msa1088410:CDS 40.0%
CTGCATTTGTCAATCTACCT+TGG - chr7_3:1591343-1591362 None:intergenic 40.0%
GATTGACAAATGCAGAAAGG+GGG + chr7_3:1591348-1591367 Msa1088410:CDS 40.0%
!! AAGGGGGTATTACAAGTCAA+AGG + chr7_3:1591364-1591383 Msa1088410:CDS 40.0%
!! AGGGGGTATTACAAGTCAAA+GGG + chr7_3:1591365-1591384 Msa1088410:CDS 40.0%
! GATTTGCTCGCTCATAACTA+AGG + chr7_3:1591401-1591420 Msa1088410:CDS 40.0%
!! GGTTTTTGACCAGTTTTGGT+AGG - chr7_3:1591541-1591560 None:intergenic 40.0%
CTGGCAAAAACGCAACACTT+CGG - chr7_3:1579847-1579866 None:intergenic 45.0%
! TGCGTTTTTGCCAGATCTTG+CGG + chr7_3:1579853-1579872 Msa1088410:five_prime_UTR 45.0%
TAATAACACGCCGCAAGATC+TGG - chr7_3:1579866-1579885 None:intergenic 45.0%
! AGATCTTGCGGCGTGTTATT+AGG + chr7_3:1579865-1579884 Msa1088410:five_prime_UTR 45.0%
! GATCTTGCGGCGTGTTATTA+GGG + chr7_3:1579866-1579885 Msa1088410:five_prime_UTR 45.0%
AGTTGCACACGAGTTACTTG+CGG + chr7_3:1580035-1580054 Msa1088410:intron 45.0%
GAGTTACTTGCGGCGATTAT+GGG + chr7_3:1580045-1580064 Msa1088410:intron 45.0%
ACGGAAAACTGCCATGGTTT+CGG - chr7_3:1580462-1580481 None:intergenic 45.0%
ACGAAGCTTCTACGTAGACA+CGG - chr7_3:1580481-1580500 None:intergenic 45.0%
CTAGTCAAAACGAGGTTTGG+AGG + chr7_3:1580750-1580769 Msa1088410:intron 45.0%
TGAACACACTGCATGTTTGG+AGG - chr7_3:1580859-1580878 None:intergenic 45.0%
GACTTAGCACGCGTTGAAAT+TGG + chr7_3:1580892-1580911 Msa1088410:intron 45.0%
TAAGAGTCAGTTCTGCTACC+TGG + chr7_3:1580948-1580967 Msa1088410:intron 45.0%
TGCTCTTAGACGGAAAAAGG+AGG + chr7_3:1580999-1581018 Msa1088410:intron 45.0%
TAACATGCAGCCAGCTCAAT+AGG + chr7_3:1581102-1581121 Msa1088410:intron 45.0%
! GAATAGTGCTGAGTAGATGC+TGG + chr7_3:1581224-1581243 Msa1088410:intron 45.0%
ATTAGACAGGCCAGATGAAG+TGG + chr7_3:1581508-1581527 Msa1088410:intron 45.0%
!! TCTAACAGTGCCACTTCATC+TGG - chr7_3:1581521-1581540 None:intergenic 45.0%
CACATCTTCACCCAATGTGA+TGG + chr7_3:1581629-1581648 Msa1088410:intron 45.0%
! TCACCCAATGTGATGGAATC+TGG + chr7_3:1581636-1581655 Msa1088410:intron 45.0%
CTGCCAGATTCCATCACATT+GGG - chr7_3:1581642-1581661 None:intergenic 45.0%
ACTGCCAGATTCCATCACAT+TGG - chr7_3:1581643-1581662 None:intergenic 45.0%
GGTTGGACATAGCCAATTAC+TGG + chr7_3:1581710-1581729 Msa1088410:intron 45.0%
ATAAGCGACAACTGACAACC+TGG + chr7_3:1581874-1581893 Msa1088410:intron 45.0%
AGGGAAGACACATCAATCGA+GGG - chr7_3:1582752-1582771 None:intergenic 45.0%
AAGGGAAGACACATCAATCG+AGG - chr7_3:1582753-1582772 None:intergenic 45.0%
AGCACTGTGAACGACATGAA+AGG + chr7_3:1582885-1582904 Msa1088410:intron 45.0%
! TTGAACAAAGGAGGGTACAG+AGG + chr7_3:1583007-1583026 Msa1088410:intron 45.0%
! TGAACAAAGGAGGGTACAGA+GGG + chr7_3:1583008-1583027 Msa1088410:intron 45.0%
GTACAGAGGGAAGAATAGGT+AGG + chr7_3:1583021-1583040 Msa1088410:intron 45.0%
AGAGGGAAGAATAGGTAGGT+GGG + chr7_3:1583025-1583044 Msa1088410:intron 45.0%
GTTATAGGCTGGTAGCAGTT+AGG + chr7_3:1583130-1583149 Msa1088410:intron 45.0%
TGAACTTCTCAGGGCAAATG+AGG + chr7_3:1583179-1583198 Msa1088410:intron 45.0%
CTGAGATAGTGTGTCCTTGT+AGG - chr7_3:1583489-1583508 None:intergenic 45.0%
ATAACCTGAGCCATTCTCCT+CGG + chr7_3:1583815-1583834 Msa1088410:intron 45.0%
TTTCTCTCTGCCTCACATCT+AGG + chr7_3:1583851-1583870 Msa1088410:intron 45.0%
TTCTCTCTGCCTCACATCTA+GGG + chr7_3:1583852-1583871 Msa1088410:intron 45.0%
AAGGGAAAAGGGGAGAGAAT+GGG - chr7_3:1583968-1583987 None:intergenic 45.0%
AAAGGGAAAAGGGGAGAGAA+TGG - chr7_3:1583969-1583988 None:intergenic 45.0%
TGGGTTCCATCAAATCCAAG+AGG + chr7_3:1584198-1584217 Msa1088410:CDS 45.0%
TCTGCACCTCTTGGATTTGA+TGG - chr7_3:1584207-1584226 None:intergenic 45.0%
GGTAATCTTTCTGCACCTCT+TGG - chr7_3:1584216-1584235 None:intergenic 45.0%
TGCGATAATTGAAGCCGAGT+CGG + chr7_3:1584239-1584258 Msa1088410:CDS 45.0%
AGGATTTAACCTCAAAGCCG+AGG + chr7_3:1584670-1584689 Msa1088410:CDS 45.0%
TACCTTGTGACCTTCACTGT+CGG + chr7_3:1584693-1584712 Msa1088410:intron 45.0%
CTGATCATAACCGACAGTGA+AGG - chr7_3:1584706-1584725 None:intergenic 45.0%
CTCTCTCTCTCTCATTGTGT+TGG + chr7_3:1584765-1584784 Msa1088410:intron 45.0%
ATGATGGCCGAACAACTGAA+TGG + chr7_3:1584863-1584882 Msa1088410:CDS 45.0%
TGATGGCCGAACAACTGAAT+GGG + chr7_3:1584864-1584883 Msa1088410:CDS 45.0%
TGAGTTTGAATGGTCGAAGC+AGG + chr7_3:1584888-1584907 Msa1088410:CDS 45.0%
GCTTAGCATACCACCTAAGA+GGG - chr7_3:1585086-1585105 None:intergenic 45.0%
CTCTTAGGTGGTATGCTAAG+CGG + chr7_3:1585085-1585104 Msa1088410:intron 45.0%
GTTTCTGCATCCTGACATTG+TGG + chr7_3:1585107-1585126 Msa1088410:CDS 45.0%
CAAGTGCAGATACCTAAGAC+TGG + chr7_3:1585526-1585545 Msa1088410:intron 45.0%
CATGCTTTCTCACCAGTCTT+AGG - chr7_3:1585541-1585560 None:intergenic 45.0%
CTAAGACTGGTGAGAAAGCA+TGG + chr7_3:1585539-1585558 Msa1088410:CDS 45.0%
CCATTATTAGGTTCCAGACC+AGG - chr7_3:1585581-1585600 None:intergenic 45.0%
! CCTGGTCTGGAACCTAATAA+TGG + chr7_3:1585578-1585597 Msa1088410:CDS 45.0%
TGCCATGTCAGCCCATTATT+AGG - chr7_3:1585593-1585612 None:intergenic 45.0%
ACAAGCACCAGAAGAAAGTG+GGG - chr7_3:1585674-1585693 None:intergenic 45.0%
AGAGAAACAGAGGAGAAACC+AGG + chr7_3:1585739-1585758 Msa1088410:intron 45.0%
AAACAGAGGAGAAACCAGGA+TGG + chr7_3:1585743-1585762 Msa1088410:CDS 45.0%
CATGCTTCACGTGAAAACAC+TGG - chr7_3:1585896-1585915 None:intergenic 45.0%
! CAGTGTTTTCACGTGAAGCA+TGG + chr7_3:1585894-1585913 Msa1088410:CDS 45.0%
ACTCCTATCTTCTCATAGGC+CGG - chr7_3:1586214-1586233 None:intergenic 45.0%
! CATCAAAGTATTCCCTCGCT+AGG + chr7_3:1586256-1586275 Msa1088410:CDS 45.0%
ATTACCTGATTCCCTAGCGA+GGG - chr7_3:1586271-1586290 None:intergenic 45.0%
AATTACCTGATTCCCTAGCG+AGG - chr7_3:1586272-1586291 None:intergenic 45.0%
GCTTGACATCCTAGTCTCTT+TGG + chr7_3:1586449-1586468 Msa1088410:intron 45.0%
GACAATGTTCCAGAGTCGAA+TGG + chr7_3:1586682-1586701 Msa1088410:intron 45.0%
AATGGAAGGCAATGTGGTGA+TGG - chr7_3:1586797-1586816 None:intergenic 45.0%
! TGTCGAATGGTTGGCTGTTA+TGG + chr7_3:1587125-1587144 Msa1088410:intron 45.0%
CAATGTTGCTCAAGGTCTCA+CGG + chr7_3:1587365-1587384 Msa1088410:intron 45.0%
ACGGTGTCTTCGTATCACTT+GGG + chr7_3:1587384-1587403 Msa1088410:intron 45.0%
ATGGAAGGAAGCAAGCTAGA+TGG - chr7_3:1588612-1588631 None:intergenic 45.0%
! TGCAGTTGATGCAGTCTTAG+AGG + chr7_3:1588911-1588930 Msa1088410:intron 45.0%
TGGGTTCCAACAAATCCTAG+AGG + chr7_3:1589124-1589143 Msa1088410:intron 45.0%
!! TCTGCACCTCTAGGATTTGT+TGG - chr7_3:1589133-1589152 None:intergenic 45.0%
GGTAATCTTTCTGCACCTCT+AGG - chr7_3:1584216-1584235 None:intergenic 45.0%
GTGCAGAAAGATTACCTCCT+GGG + chr7_3:1584220-1584239 Msa1088410:CDS 45.0%
TGAGCATTAACAATCCCAGG+AGG - chr7_3:1589163-1589182 None:intergenic 45.0%
ACTTCTTCTTGCGCAGATTG+TGG + chr7_3:1589188-1589207 Msa1088410:intron 45.0%
CTTCTTCTTGCGCAGATTGT+GGG + chr7_3:1589189-1589208 Msa1088410:intron 45.0%
TTCTTCTTGCGCAGATTGTG+GGG + chr7_3:1589190-1589209 Msa1088410:intron 45.0%
TGGTGAGTTAAGTGCCTGTT+TGG - chr7_3:1589483-1589502 None:intergenic 45.0%
! CACAAGGTACTTTGGCTTAG+AGG - chr7_3:1589587-1589606 None:intergenic 45.0%
! GTGAAGGTCACAAGGTACTT+TGG - chr7_3:1589595-1589614 None:intergenic 45.0%
TACCTTGTGACCTTCACTGT+TGG + chr7_3:1584693-1584712 Msa1088410:intron 45.0%
ACCTTGTGACCTTCACTGTT+GGG + chr7_3:1589599-1589618 Msa1088410:CDS 45.0%
CTGTTGATACCCAACAGTGA+AGG - chr7_3:1589611-1589630 None:intergenic 45.0%
ACTCATCCCATTCGGTTGTT+CGG - chr7_3:1589792-1589811 None:intergenic 45.0%
CCACTCAAACTCATCCCATT+CGG - chr7_3:1589800-1589819 None:intergenic 45.0%
TTCATGTGGGATGAAGACCT+TGG + chr7_3:1590042-1590061 Msa1088410:CDS 45.0%
TCATGTGGGATGAAGACCTT+GGG + chr7_3:1590043-1590062 Msa1088410:CDS 45.0%
AGACATGCACAAGAGAAACC+AGG + chr7_3:1590498-1590517 Msa1088410:intron 45.0%
GACATGCACAAGAGAAACCA+GGG + chr7_3:1590499-1590518 Msa1088410:intron 45.0%
!! AGAGGGTATTTACACTTCCC+TGG - chr7_3:1590519-1590538 None:intergenic 45.0%
ATCTCGACAAATGCTGCACA+AGG - chr7_3:1590549-1590568 None:intergenic 45.0%
CATGCATCTCGCGAAAAAAC+AGG - chr7_3:1590579-1590598 None:intergenic 45.0%
!!! CTGTTTTTTCGCGAGATGCA+TGG + chr7_3:1590577-1590596 Msa1088410:intron 45.0%
TTGTGTGTGGCACATGATTC+AGG + chr7_3:1590602-1590621 Msa1088410:intron 45.0%
TAGCCTGCCCATGAGAAAAT+TGG + chr7_3:1590944-1590963 Msa1088410:intron 45.0%
! ACTCCAATTTTCTCATGGGC+AGG - chr7_3:1590950-1590969 None:intergenic 45.0%
!! GCTCAATGGATTGTTCACCA+AGG + chr7_3:1590977-1590996 Msa1088410:CDS 45.0%
! CACCAAGGTATTCCATCACT+AGG + chr7_3:1590992-1591011 Msa1088410:CDS 45.0%
! CCAAGGTATTCCATCACTAG+GGG + chr7_3:1590994-1591013 Msa1088410:CDS 45.0%
TATTCCATCACTAGGGGATC+AGG + chr7_3:1591000-1591019 Msa1088410:CDS 45.0%
ATTACCTGATCCCCTAGTGA+TGG - chr7_3:1591007-1591026 None:intergenic 45.0%
ATTGGTTGCAGGTTAAGGAG+AGG + chr7_3:1591294-1591313 Msa1088410:intron 45.0%
! GCTCGGTTTTTGACCAGTTT+TGG - chr7_3:1591545-1591564 None:intergenic 45.0%
!! AAGGATTCTGCTGCTTTGCT+CGG - chr7_3:1591562-1591581 None:intergenic 45.0%
! TCAGCGCTTCAGTTTTCTGA+AGG - chr7_3:1591581-1591600 None:intergenic 45.0%
!! TTTAAATTTGAATTAAAAAA+TGG - chr7_3:1579577-1579596 None:intergenic 5.0%
!! TTATTTATTAATTGATAAAA+TGG + chr7_3:1583569-1583588 Msa1088410:intron 5.0%
GCAAAAACGCAACACTTCGG+TGG - chr7_3:1579844-1579863 None:intergenic 50.0%
CGAGTTACTTGCGGCGATTA+TGG + chr7_3:1580044-1580063 Msa1088410:intron 50.0%
CGGAAAACTGCCATGGTTTC+GGG - chr7_3:1580461-1580480 None:intergenic 50.0%
GTAGACACGGAAAACTGCCA+TGG - chr7_3:1580468-1580487 None:intergenic 50.0%
CAGTTCTGCTACCTGGTGAA+AGG + chr7_3:1580955-1580974 Msa1088410:intron 50.0%
!! GAGCAGTTCAAAGTGCTGCA+TGG + chr7_3:1581333-1581352 Msa1088410:intron 50.0%
!! GTTCAAAGTGCTGCATGGCA+TGG + chr7_3:1581338-1581357 Msa1088410:intron 50.0%
AAGCAGTGACCCCTTGAGAT+AGG + chr7_3:1581963-1581982 Msa1088410:intron 50.0%
GGCACTATGTTGAAGGATGC+AGG + chr7_3:1581984-1582003 Msa1088410:intron 50.0%
GTAGTAGAAGCCTGACCCAA+GGG + chr7_3:1582049-1582068 Msa1088410:intron 50.0%
TAGTAGAAGCCTGACCCAAG+GGG + chr7_3:1582050-1582069 Msa1088410:intron 50.0%
TAATGGGGACCAATACTCGC+AGG + chr7_3:1582377-1582396 Msa1088410:exon 50.0%
!! ATGTCGTTCACAGTGCTGAC+TGG - chr7_3:1582882-1582901 None:intergenic 50.0%
! GAGGGTACAGAGGGAAGAAT+AGG + chr7_3:1583017-1583036 Msa1088410:intron 50.0%
CAGAGGGAAGAATAGGTAGG+TGG + chr7_3:1583024-1583043 Msa1088410:intron 50.0%
ATATGTAGCAGCAGCAGGCA+AGG - chr7_3:1583435-1583454 None:intergenic 50.0%
CGGTTAGTACCCTAGATGTG+AGG - chr7_3:1583864-1583883 None:intergenic 50.0%
AGGGAAAAGGGGAGAGAATG+GGG - chr7_3:1583967-1583986 None:intergenic 50.0%
TCGGCTTCAATTATCGCAGG+AGG - chr7_3:1584237-1584256 None:intergenic 50.0%
GACTCGGCTTCAATTATCGC+AGG - chr7_3:1584240-1584259 None:intergenic 50.0%
! GTGAAGGTCACAAGGTACCT+CGG - chr7_3:1584690-1584709 None:intergenic 50.0%
AACCGACAGTGAAGGTCACA+AGG - chr7_3:1584698-1584717 None:intergenic 50.0%
CGCTTAGCATACCACCTAAG+AGG - chr7_3:1585087-1585106 None:intergenic 50.0%
! TCGTAAGGTGCCACAATGTC+AGG - chr7_3:1585120-1585139 None:intergenic 50.0%
! ACTGGTGAGAAAGCATGGGT+TGG + chr7_3:1585544-1585563 Msa1088410:CDS 50.0%
AAAGAGAAGAGGTGATCGCG+AGG + chr7_3:1585619-1585638 Msa1088410:CDS 50.0%
ACTGAGACTTACGCTGCACA+AGG - chr7_3:1585790-1585809 None:intergenic 50.0%
CTGCGTGTGGCATATGATTC+AGG + chr7_3:1585919-1585938 Msa1088410:CDS 50.0%
!! CTTCAGAACGACTTGGTCCA+TGG + chr7_3:1586058-1586077 Msa1088410:intron 50.0%
!! AGAACGACTTGGTCCATGGA+TGG + chr7_3:1586062-1586081 Msa1088410:intron 50.0%
!! GAACGACTTGGTCCATGGAT+GGG + chr7_3:1586063-1586082 Msa1088410:intron 50.0%
!! AACGACTTGGTCCATGGATG+GGG + chr7_3:1586064-1586083 Msa1088410:CDS 50.0%
TAGCCGGCCTATGAGAAGAT+AGG + chr7_3:1586208-1586227 Msa1088410:intron 50.0%
TATTCCCTCGCTAGGGAATC+AGG + chr7_3:1586264-1586283 Msa1088410:CDS 50.0%
! ACGCTGTTGATTGCCAGGTA+AGG + chr7_3:1586639-1586658 Msa1088410:intron 50.0%
! CGCTGTTGATTGCCAGGTAA+GGG + chr7_3:1586640-1586659 Msa1088410:intron 50.0%
TTGATTGCCAGGTAAGGGAG+AGG + chr7_3:1586645-1586664 Msa1088410:intron 50.0%
TTCTACACCTCTCCCTTACC+TGG - chr7_3:1586655-1586674 None:intergenic 50.0%
! GGTAAGGGAGAGGTGTAGAA+AGG + chr7_3:1586655-1586674 Msa1088410:intron 50.0%
AGGATCTATGCGACAATGCC+TGG + chr7_3:1586971-1586990 Msa1088410:intron 50.0%
CACGGTGTCTTCGTATCACT+TGG + chr7_3:1587383-1587402 Msa1088410:intron 50.0%
GGAAAGGAGTAGCTAGCACA+AGG - chr7_3:1588038-1588057 None:intergenic 50.0%
GGTGCAGAAAGATTACCTCC+TGG + chr7_3:1584219-1584238 Msa1088410:CDS 50.0%
ATTGTGGGGTCTTCCCAATG+AGG + chr7_3:1589204-1589223 Msa1088410:intron 50.0%
ACCCAACAGTGAAGGTCACA+AGG - chr7_3:1589603-1589622 None:intergenic 50.0%
CCGAATGGGATGAGTTTGAG+TGG + chr7_3:1589797-1589816 Msa1088410:CDS 50.0%
CTCTTAGGTGGTATGCCAAG+AGG + chr7_3:1589980-1589999 Msa1088410:intron 50.0%
GTCTGGATGCAGAAACCTCT+TGG - chr7_3:1589998-1590017 None:intergenic 50.0%
CATGTGGGATGAAGACCTTG+GGG + chr7_3:1590044-1590063 Msa1088410:CDS 50.0%
! ACTGGTGAAGAAGCATGGCT+TGG + chr7_3:1590290-1590309 Msa1088410:CDS 50.0%
CTGCACAAGGAGGAAGAAGA+GGG - chr7_3:1590536-1590555 None:intergenic 50.0%
TCGACAAATGCTGCACAAGG+AGG - chr7_3:1590546-1590565 None:intergenic 50.0%
! CCCCTAGTGATGGAATACCT+TGG - chr7_3:1590997-1591016 None:intergenic 50.0%
CTTCTCCCTATCAAGCGCAA+AGG - chr7_3:1591101-1591120 None:intergenic 50.0%
! TGATAGGGAGAAGCACAGAC+TGG + chr7_3:1591108-1591127 Msa1088410:intron 50.0%
! GATAGGGAGAAGCACAGACT+GGG + chr7_3:1591109-1591128 Msa1088410:intron 50.0%
TTGCAGGTTAAGGAGAGGTG+TGG + chr7_3:1591299-1591318 Msa1088410:intron 50.0%
ACTGCCATGGTTTCGGGCTA+AGG - chr7_3:1580455-1580474 None:intergenic 55.0%
!! CTGTTTGGTTTGGCGTTCGG+AGG - chr7_3:1580556-1580575 None:intergenic 55.0%
! TGCATGTTTGGAGGCACGCT+GGG - chr7_3:1580850-1580869 None:intergenic 55.0%
GGTAGTAGAAGCCTGACCCA+AGG + chr7_3:1582048-1582067 Msa1088410:intron 55.0%
TAGTAGTAGCCCCTTGGGTC+AGG - chr7_3:1582062-1582081 None:intergenic 55.0%
ACACATCAATCGAGGGACGC+AGG - chr7_3:1582745-1582764 None:intergenic 55.0%
! CAGCAGCAGGCAAGGTTGAT+AGG - chr7_3:1583427-1583446 None:intergenic 55.0%
CGCACATATGTAGCAGCAGC+AGG - chr7_3:1583440-1583459 None:intergenic 55.0%
CACATGCACATGCGCCTACA+AGG + chr7_3:1583472-1583491 Msa1088410:intron 55.0%
TTCTCCGAGGAGAATGGCTC+AGG - chr7_3:1583822-1583841 None:intergenic 55.0%
! CACAAGGTACCTCGGCTTTG+AGG - chr7_3:1584682-1584701 None:intergenic 55.0%
GGGTTGGAGATTTCACAGCC+TGG + chr7_3:1585560-1585579 Msa1088410:CDS 55.0%
GGAGATTTCACAGCCTGGTC+TGG + chr7_3:1585565-1585584 Msa1088410:CDS 55.0%
CTGCACAAGGAGGCAGATGA+GGG - chr7_3:1585777-1585796 None:intergenic 55.0%
GAGACTTACGCTGCACAAGG+AGG - chr7_3:1585787-1585806 None:intergenic 55.0%
GTGGGTGCTTCAGAACGACT+TGG + chr7_3:1586051-1586070 Msa1088410:intron 55.0%
CAAAGTCGAGACCCCATCCA+TGG - chr7_3:1586078-1586097 None:intergenic 55.0%
ACTTCCCTCTGTCGTGTAGC+CGG + chr7_3:1586192-1586211 Msa1088410:intron 55.0%
! CAAAATCTGGGACAGCGCCA+TGG + chr7_3:1586393-1586412 Msa1088410:CDS 55.0%
GCGTAACATACCCCTTGCCA+TGG - chr7_3:1586413-1586432 None:intergenic 55.0%
! GGGAGAGGTGTAGAAAGGAG+TGG + chr7_3:1586660-1586679 Msa1088410:intron 55.0%
CAAGTCGTCACTGTCCCCTA+AGG - chr7_3:1586767-1586786 None:intergenic 55.0%
GCATTCGCGGTAGGGATACA+TGG + chr7_3:1588643-1588662 Msa1088410:CDS 55.0%
ACGATGGCCGAACAACCGAA+TGG + chr7_3:1589782-1589801 Msa1088410:CDS 55.0%
CGATGGCCGAACAACCGAAT+GGG + chr7_3:1589783-1589802 Msa1088410:CDS 55.0%
GCTGCACAAGGAGGAAGAAG+AGG - chr7_3:1590537-1590556 None:intergenic 55.0%
GAGATGCATGGCGTTGTGTG+TGG + chr7_3:1590589-1590608 Msa1088410:intron 55.0%
! AGAAGCACAGACTGGGAAGC+CGG + chr7_3:1591116-1591135 Msa1088410:intron 55.0%
! GGTTAAGGAGAGGTGTGGCA+TGG + chr7_3:1591304-1591323 Msa1088410:intron 55.0%
! AGGAGAGGTGTGGCATGGAA+TGG + chr7_3:1591309-1591328 Msa1088410:CDS 55.0%
CGTGCCTTAGCCCGAAACCA+TGG + chr7_3:1580448-1580467 Msa1088410:intron 60.0%
! CATGTTTGGAGGCACGCTGG+GGG - chr7_3:1580848-1580867 None:intergenic 60.0%
! GCATGTTTGGAGGCACGCTG+GGG - chr7_3:1580849-1580868 None:intergenic 60.0%
! CTGCATGTTTGGAGGCACGC+TGG - chr7_3:1580851-1580870 None:intergenic 60.0%
ATCAATCGAGGGACGCAGGC+GGG - chr7_3:1582741-1582760 None:intergenic 60.0%
CATCAATCGAGGGACGCAGG+CGG - chr7_3:1582742-1582761 None:intergenic 60.0%
TCTCAGGGCAAATGAGGCGC+TGG + chr7_3:1583185-1583204 Msa1088410:intron 60.0%
TGAGGGTCACTGCACCATCC+TGG - chr7_3:1585760-1585779 None:intergenic 60.0%
GCTGCACAAGGAGGCAGATG+AGG - chr7_3:1585778-1585797 None:intergenic 60.0%
TAGGCCGGCTACACGACAGA+GGG - chr7_3:1586199-1586218 None:intergenic 60.0%
ATAGGCCGGCTACACGACAG+AGG - chr7_3:1586200-1586219 None:intergenic 60.0%
TAACATACCGCCCGCCATGC+CGG - chr7_3:1591138-1591157 None:intergenic 60.0%
ATTGTGGGGTGAGCCCAGCG+AGG + chr7_3:1584278-1584297 Msa1088410:CDS 65.0%
GTGAAGCATGGCGCTGCGTG+TGG + chr7_3:1585906-1585925 Msa1088410:CDS 65.0%
! TCTGGGACAGCGCCATGGCA+AGG + chr7_3:1586398-1586417 Msa1088410:CDS 65.0%
CTGGGACAGCGCCATGGCAA+GGG + chr7_3:1586399-1586418 Msa1088410:CDS 65.0%
TGGGACAGCGCCATGGCAAG+GGG + chr7_3:1586400-1586419 Msa1088410:CDS 65.0%
CTGCACGCGCCATTCGACTC+TGG - chr7_3:1586694-1586713 None:intergenic 65.0%
CACAGACTGGGAAGCCGGCA+TGG + chr7_3:1591121-1591140 Msa1088410:intron 65.0%
AGACTGGGAAGCCGGCATGG+CGG + chr7_3:1591124-1591143 Msa1088410:intron 65.0%
! TGGAGGCACGCTGGGGGATG+TGG - chr7_3:1580842-1580861 None:intergenic 70.0%
GACTGGGAAGCCGGCATGGC+GGG + chr7_3:1591125-1591144 Msa1088410:intron 70.0%
! TGGGAAGCCGGCATGGCGGG+CGG + chr7_3:1591128-1591147 Msa1088410:intron 75.0%
Chromosome Type Strat End Strand Name
chr7_3 gene 1579442 1591659 1579442 ID=Msa1088410;Name=Msa1088410
chr7_3 mRNA 1579442 1591659 1579442 ID=Msa1088410-mRNA-1;Parent=Msa1088410;Name=Msa1088410-mRNA-1;_AED=0.25;_eAED=0.28;_QI=578|0.71|0.90|1|0.95|0.90|22|238|636
chr7_3 exon 1579442 1579897 1579442 ID=Msa1088410-mRNA-1:exon:625;Parent=Msa1088410-mRNA-1
chr7_3 exon 1582257 1582398 1582257 ID=Msa1088410-mRNA-1:exon:626;Parent=Msa1088410-mRNA-1
chr7_3 exon 1582499 1582607 1582499 ID=Msa1088410-mRNA-1:exon:627;Parent=Msa1088410-mRNA-1
chr7_3 exon 1582725 1582865 1582725 ID=Msa1088410-mRNA-1:exon:628;Parent=Msa1088410-mRNA-1
chr7_3 exon 1584195 1584299 1584195 ID=Msa1088410-mRNA-1:exon:629;Parent=Msa1088410-mRNA-1
chr7_3 exon 1584593 1584691 1584593 ID=Msa1088410-mRNA-1:exon:630;Parent=Msa1088410-mRNA-1
chr7_3 exon 1584829 1584944 1584829 ID=Msa1088410-mRNA-1:exon:631;Parent=Msa1088410-mRNA-1
chr7_3 exon 1585092 1585193 1585092 ID=Msa1088410-mRNA-1:exon:632;Parent=Msa1088410-mRNA-1
chr7_3 exon 1585535 1585648 1585535 ID=Msa1088410-mRNA-1:exon:633;Parent=Msa1088410-mRNA-1
chr7_3 exon 1585741 1585797 1585741 ID=Msa1088410-mRNA-1:exon:634;Parent=Msa1088410-mRNA-1
chr7_3 exon 1585874 1585940 1585874 ID=Msa1088410-mRNA-1:exon:635;Parent=Msa1088410-mRNA-1
chr7_3 exon 1586064 1586117 1586064 ID=Msa1088410-mRNA-1:exon:636;Parent=Msa1088410-mRNA-1
chr7_3 exon 1586211 1586285 1586211 ID=Msa1088410-mRNA-1:exon:637;Parent=Msa1088410-mRNA-1
chr7_3 exon 1586386 1586421 1586386 ID=Msa1088410-mRNA-1:exon:638;Parent=Msa1088410-mRNA-1
chr7_3 exon 1588600 1588728 1588600 ID=Msa1088410-mRNA-1:exon:639;Parent=Msa1088410-mRNA-1
chr7_3 exon 1589577 1589660 1589577 ID=Msa1088410-mRNA-1:exon:640;Parent=Msa1088410-mRNA-1
chr7_3 exon 1589748 1589863 1589748 ID=Msa1088410-mRNA-1:exon:641;Parent=Msa1088410-mRNA-1
chr7_3 exon 1589987 1590088 1589987 ID=Msa1088410-mRNA-1:exon:642;Parent=Msa1088410-mRNA-1
chr7_3 exon 1590281 1590394 1590281 ID=Msa1088410-mRNA-1:exon:643;Parent=Msa1088410-mRNA-1
chr7_3 exon 1590500 1590578 1590500 ID=Msa1088410-mRNA-1:exon:644;Parent=Msa1088410-mRNA-1
chr7_3 exon 1590947 1591021 1590947 ID=Msa1088410-mRNA-1:exon:645;Parent=Msa1088410-mRNA-1
chr7_3 exon 1591305 1591659 1591305 ID=Msa1088410-mRNA-1:exon:646;Parent=Msa1088410-mRNA-1
chr7_3 five_prime_UTR 1579442 1579897 1579442 ID=Msa1088410-mRNA-1:five_prime_utr;Parent=Msa1088410-mRNA-1
chr7_3 five_prime_UTR 1582257 1582378 1582257 ID=Msa1088410-mRNA-1:five_prime_utr;Parent=Msa1088410-mRNA-1
chr7_3 CDS 1582379 1582398 1582379 ID=Msa1088410-mRNA-1:cds;Parent=Msa1088410-mRNA-1
chr7_3 CDS 1582499 1582607 1582499 ID=Msa1088410-mRNA-1:cds;Parent=Msa1088410-mRNA-1
chr7_3 CDS 1582725 1582865 1582725 ID=Msa1088410-mRNA-1:cds;Parent=Msa1088410-mRNA-1
chr7_3 CDS 1584195 1584299 1584195 ID=Msa1088410-mRNA-1:cds;Parent=Msa1088410-mRNA-1
chr7_3 CDS 1584593 1584691 1584593 ID=Msa1088410-mRNA-1:cds;Parent=Msa1088410-mRNA-1
chr7_3 CDS 1584829 1584944 1584829 ID=Msa1088410-mRNA-1:cds;Parent=Msa1088410-mRNA-1
chr7_3 CDS 1585092 1585193 1585092 ID=Msa1088410-mRNA-1:cds;Parent=Msa1088410-mRNA-1
chr7_3 CDS 1585535 1585648 1585535 ID=Msa1088410-mRNA-1:cds;Parent=Msa1088410-mRNA-1
chr7_3 CDS 1585741 1585797 1585741 ID=Msa1088410-mRNA-1:cds;Parent=Msa1088410-mRNA-1
chr7_3 CDS 1585874 1585940 1585874 ID=Msa1088410-mRNA-1:cds;Parent=Msa1088410-mRNA-1
chr7_3 CDS 1586064 1586117 1586064 ID=Msa1088410-mRNA-1:cds;Parent=Msa1088410-mRNA-1
chr7_3 CDS 1586211 1586285 1586211 ID=Msa1088410-mRNA-1:cds;Parent=Msa1088410-mRNA-1
chr7_3 CDS 1586386 1586421 1586386 ID=Msa1088410-mRNA-1:cds;Parent=Msa1088410-mRNA-1
chr7_3 CDS 1588600 1588728 1588600 ID=Msa1088410-mRNA-1:cds;Parent=Msa1088410-mRNA-1
chr7_3 CDS 1589577 1589660 1589577 ID=Msa1088410-mRNA-1:cds;Parent=Msa1088410-mRNA-1
chr7_3 CDS 1589748 1589863 1589748 ID=Msa1088410-mRNA-1:cds;Parent=Msa1088410-mRNA-1
chr7_3 CDS 1589987 1590088 1589987 ID=Msa1088410-mRNA-1:cds;Parent=Msa1088410-mRNA-1
chr7_3 CDS 1590281 1590394 1590281 ID=Msa1088410-mRNA-1:cds;Parent=Msa1088410-mRNA-1
chr7_3 CDS 1590500 1590578 1590500 ID=Msa1088410-mRNA-1:cds;Parent=Msa1088410-mRNA-1
chr7_3 CDS 1590947 1591021 1590947 ID=Msa1088410-mRNA-1:cds;Parent=Msa1088410-mRNA-1
chr7_3 CDS 1591305 1591421 1591305 ID=Msa1088410-mRNA-1:cds;Parent=Msa1088410-mRNA-1
chr7_3 three_prime_UTR 1591422 1591659 1591422 ID=Msa1088410-mRNA-1:three_prime_utr;Parent=Msa1088410-mRNA-1
Gene Sequence

>Msa1088410

ATGGGGACCAATACTCGCAGTTCTACCAATAGAAAACCAAATGAAGGTATGAGGCTTGTTCTGACAACTTTTGTTGGAATAGTTTTTGGCTTCTTAATAGGGATATCATATCCATCATTAACTACAAAGTTGAATATCTCATCCCGCCTGCGTCCCTCGATTGATGTGTCTTCCCTTGAAGATGAATATGAAAGTGGCAATGGTCGGTCTTTTATGAAGAATAATAGCAGCGGCTCATCAAAATATCAGTTATTAAATGACACGTTGAAGATTTGGGTTCCATCAAATCCAAGAGGTGCAGAAAGATTACCTCCTGCGATAATTGAAGCCGAGTCGGACTTTTATTTGCGTAGATTGTGGGGTGAGCCCAGCGAGGTCAATTTTGAAACTCTTGGATTGGAGAGGTCTCAAATGTATTTTTATTGTAGTAAGTTGATTAAGTTACCACTCACAGGATTTAACCTCAAAGCCGAGTTTTCAGGGGATTTCACGATACTTCTGTTTCATTATGATGGCCGAACAACTGAATGGGATGAGTTTGAATGGTCGAAGCAGGCTATTCACGTGAGTGTTCGCAAACAGACAAAATGGTGGTATGCTAAGCGGTTTCTGCATCCTGACATTGTGGCACCTTACGACTATATTTTTATATGGGATGAAGATCTGGGTGTTGAGCATTTTAATGCAGAGGAATACCTAAGACTGGTGAGAAAGCATGGGTTGGAGATTTCACAGCCTGGTCTGGAACCTAATAATGGGCTGACATGGCAAATGACAAAGAGAAGAGGTGATCGCGAGGTTCACAAAGAAACAGAGGAGAAACCAGGATGGTGCAGTGACCCTCATCTGCCTCCTTGTGCAGCGTTTGTTGAGATTATGGCTCCAGTGTTTTCACGTGAAGCATGGCGCTGCGTGTGGCATATGATTCAGAACGACTTGGTCCATGGATGGGGTCTCGACTTTGCTCTTAGAAAATGTGTTGAGCCGGCCTATGAGAAGATAGGAGTTGTTGATACTCAGTGGATTATTCATCAAAGTATTCCCTCGCTAGGGAATCAGGGAGAATCAAAATCTGGGACAGCGCCATGGCAAGGGTTGAATCTGCCATCTAGCTTGCTTCCTTCCATTGATTTATCATGCATTCGCGGTAGGGATACATGGTCTTTCATGAAGAATGATGATAGCATCTCATCACAAGACCAGTTACTGAATAATCCATCTAAGGATTTTACCTCTAAGCCAAAGTACCTTGTGACCTTCACTGTTGGGTATCAACAGAAAAAGAATATTGATGCAGCTGTGAAAAAGTTTTCAAAGGACTTCACAATCCTTCTATTTCATTACGATGGCCGAACAACCGAATGGGATGAGTTTGAGTGGTCAAAAAAAGCTATCCATGTGAGTGTTCACAAACAAACCAAGTGGTGGTATGCCAAGAGGTTTCTGCATCCAGACATTGTTGCATCATATGAGTATATTTTCATGTGGGATGAAGACCTTGGGGTTGAGAATTTTAACGCAGAAGAATACATAAAACTGGTGAAGAAGCATGGCTTGGAGATTTCACAGCCAGCTTTAGAACCTCAAAAAGGGTTGATTTGGAATATGACAAAGAGAAGAAATGACAGTGAAGTGCACAAACATGCACAAGAGAAACCAGGGAAGTGTAAATACCCTCTTCTTCCTCCTTGTGCAGCATTTGTCGAGATTATGGCTCCTCCTGCCCATGAGAAAATTGGAGTTGTTGATGCTCAATGGATTGTTCACCAAGGTATTCCATCACTAGGGGATCAGGTTAAGGAGAGGTGTGGCATGGAATGGAGAATGTTCCAAGGTAGATTGACAAATGCAGAAAGGGGGTATTACAAGTCAAAGGGAATTGATTTTTCTGATTTGCTCGCTCATAACTAA
Protein sequence

>Msa1088410

MGTNTRSSTNRKPNEGMRLVLTTFVGIVFGFLIGISYPSLTTKLNISSRLRPSIDVSSLEDEYESGNGRSFMKNNSSGSSKYQLLNDTLKIWVPSNPRGAERLPPAIIEAESDFYLRRLWGEPSEVNFETLGLERSQMYFYCSKLIKLPLTGFNLKAEFSGDFTILLFHYDGRTTEWDEFEWSKQAIHVSVRKQTKWWYAKRFLHPDIVAPYDYIFIWDEDLGVEHFNAEEYLRLVRKHGLEISQPGLEPNNGLTWQMTKRRGDREVHKETEEKPGWCSDPHLPPCAAFVEIMAPVFSREAWRCVWHMIQNDLVHGWGLDFALRKCVEPAYEKIGVVDTQWIIHQSIPSLGNQGESKSGTAPWQGLNLPSSLLPSIDLSCIRGRDTWSFMKNDDSISSQDQLLNNPSKDFTSKPKYLVTFTVGYQQKKNIDAAVKKFSKDFTILLFHYDGRTTEWDEFEWSKKAIHVSVHKQTKWWYAKRFLHPDIVASYEYIFMWDEDLGVENFNAEEYIKLVKKHGLEISQPALEPQKGLIWNMTKRRNDSEVHKHAQEKPGKCKYPLLPPCAAFVEIMAPPAHEKIGVVDAQWIVHQGIPSLGDQVKERCGMEWRMFQGRLTNAERGYYKSKGIDFSDLLAHN*