Alfalfa Gene Editing Database
Alfalfa Gene Editing Database
Nr:
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene58835.t1 | XP_024627142.1 | 95.6 | 430 | 19 | 0 | 33 | 462 | 32 | 461 | 7.10E-215 | 756.5 |
Swissprot:
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene58835.t1 | P25011 | 70.3 | 427 | 113 | 8 | 34 | 457 | 30 | 445 | 9.9e-157 | 554.7 |
Trembl:
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene58835.t1 | A0A396H4G4 | 95.6 | 430 | 19 | 0 | 33 | 462 | 32 | 461 | 5.1e-215 | 756.5 |
TFs/TRs:
| Gene ID | Type | Classification |
|---|
Protein Kinases:
| Gene ID | Type | Classification |
|---|
Network:
Co-expression Network:
| Gene1 | Gene2 | correlation coefficient | p_value | FDR |
|---|---|---|---|---|
| MS.gene049596 | MS.gene58835 | 0.829347 | 5.42E-55 | -1.69E-46 |
| MS.gene04985 | MS.gene58835 | 0.82562 | 4.24E-54 | -1.69E-46 |
| MS.gene049989 | MS.gene58835 | 0.872343 | 3.42E-67 | -1.69E-46 |
| MS.gene050297 | MS.gene58835 | 0.851862 | 6.73E-61 | -1.69E-46 |
| MS.gene051025 | MS.gene58835 | 0.803811 | 2.92E-49 | -1.69E-46 |
| MS.gene05124 | MS.gene58835 | 0.852914 | 3.38E-61 | -1.69E-46 |
| MS.gene051263 | MS.gene58835 | 0.820622 | 6.22E-53 | -1.69E-46 |
| MS.gene051339 | MS.gene58835 | 0.806544 | 7.81E-50 | -1.69E-46 |
| MS.gene051423 | MS.gene58835 | 0.80567 | 1.19E-49 | -1.69E-46 |
| MS.gene051629 | MS.gene58835 | 0.833235 | 5.99E-56 | -1.69E-46 |
| MS.gene051742 | MS.gene58835 | 0.812227 | 4.71E-51 | -1.69E-46 |
| MS.gene051816 | MS.gene58835 | 0.820762 | 5.78E-53 | -1.69E-46 |
| MS.gene051896 | MS.gene58835 | 0.826187 | 3.11E-54 | -1.69E-46 |
| MS.gene051914 | MS.gene58835 | 0.859661 | 3.55E-63 | -1.69E-46 |
| MS.gene051955 | MS.gene58835 | 0.849482 | 3.14E-60 | -1.69E-46 |
| MS.gene052143 | MS.gene58835 | 0.845772 | 3.30E-59 | -1.69E-46 |
| MS.gene052308 | MS.gene58835 | 0.877093 | 8.28E-69 | -1.69E-46 |
| MS.gene052367 | MS.gene58835 | 0.904195 | 1.58E-79 | -1.69E-46 |
| MS.gene053173 | MS.gene58835 | 0.905143 | 5.86E-80 | -1.69E-46 |
| MS.gene053348 | MS.gene58835 | 0.877242 | 7.35E-69 | -1.69E-46 |
| MS.gene053416 | MS.gene58835 | 0.866638 | 2.46E-65 | -1.69E-46 |
| MS.gene053417 | MS.gene58835 | 0.86486 | 8.97E-65 | -1.69E-46 |
| MS.gene05369 | MS.gene58835 | 0.830666 | 2.58E-55 | -1.69E-46 |
| MS.gene054459 | MS.gene58835 | 0.814792 | 1.29E-51 | -1.69E-46 |
| MS.gene054551 | MS.gene58835 | 0.907883 | 3.13E-81 | -1.69E-46 |
| MS.gene054552 | MS.gene58835 | 0.832443 | 9.42E-56 | -1.69E-46 |
| MS.gene054593 | MS.gene58835 | 0.883168 | 5.64E-71 | -1.69E-46 |
| MS.gene054633 | MS.gene58835 | 0.857099 | 2.06E-62 | -1.69E-46 |
| MS.gene054643 | MS.gene58835 | 0.824915 | 6.23E-54 | -1.69E-46 |
| MS.gene054662 | MS.gene58835 | 0.875897 | 2.14E-68 | -1.69E-46 |
| MS.gene054885 | MS.gene58835 | 0.848421 | 6.20E-60 | -1.69E-46 |
| MS.gene054941 | MS.gene58835 | 0.81012 | 1.35E-50 | -1.69E-46 |
| MS.gene055308 | MS.gene58835 | 0.902597 | 8.24E-79 | -1.69E-46 |
| MS.gene055411 | MS.gene58835 | 0.800868 | 1.18E-48 | -1.69E-46 |
| MS.gene055578 | MS.gene58835 | 0.895913 | 6.10E-76 | -1.69E-46 |
| MS.gene055579 | MS.gene58835 | 0.80396 | 2.72E-49 | -1.69E-46 |
| MS.gene055957 | MS.gene58835 | 0.896048 | 5.36E-76 | -1.69E-46 |
| MS.gene055982 | MS.gene58835 | 0.811287 | 7.55E-51 | -1.69E-46 |
| MS.gene056041 | MS.gene58835 | 0.908871 | 1.06E-81 | -1.69E-46 |
| MS.gene056042 | MS.gene58835 | 0.819428 | 1.17E-52 | -1.69E-46 |
| MS.gene056335 | MS.gene58835 | 0.807283 | 5.45E-50 | -1.69E-46 |
| MS.gene05640 | MS.gene58835 | 0.907506 | 4.71E-81 | -1.69E-46 |
| MS.gene056526 | MS.gene58835 | 0.83895 | 2.12E-57 | -1.69E-46 |
| MS.gene056528 | MS.gene58835 | 0.840081 | 1.08E-57 | -1.69E-46 |
| MS.gene05652 | MS.gene58835 | 0.851604 | 7.96E-61 | -1.69E-46 |
| MS.gene057101 | MS.gene58835 | 0.810746 | 9.89E-51 | -1.69E-46 |
| MS.gene05732 | MS.gene58835 | 0.808859 | 2.52E-50 | -1.69E-46 |
| MS.gene057367 | MS.gene58835 | 0.894505 | 2.32E-75 | -1.69E-46 |
| MS.gene057458 | MS.gene58835 | 0.872549 | 2.92E-67 | -1.69E-46 |
| MS.gene057669 | MS.gene58835 | 0.818905 | 1.54E-52 | -1.69E-46 |
| MS.gene058013 | MS.gene58835 | 0.829073 | 6.31E-55 | -1.69E-46 |
| MS.gene058128 | MS.gene58835 | 0.882949 | 6.78E-71 | -1.69E-46 |
| MS.gene058818 | MS.gene58835 | 0.843545 | 1.31E-58 | -1.69E-46 |
| MS.gene058827 | MS.gene58835 | 0.832834 | 7.54E-56 | -1.69E-46 |
| MS.gene058828 | MS.gene58835 | 0.806291 | 8.83E-50 | -1.69E-46 |
| MS.gene058844 | MS.gene58835 | 0.813551 | 2.42E-51 | -1.69E-46 |
| MS.gene058849 | MS.gene58835 | 0.813591 | 2.37E-51 | -1.69E-46 |
| MS.gene058853 | MS.gene58835 | 0.894606 | 2.11E-75 | -1.69E-46 |
| MS.gene059300 | MS.gene58835 | 0.818461 | 1.94E-52 | -1.69E-46 |
| MS.gene059553 | MS.gene58835 | 0.876857 | 1.00E-68 | -1.69E-46 |
| MS.gene059616 | MS.gene58835 | 0.832817 | 7.61E-56 | -1.69E-46 |
| MS.gene060473 | MS.gene58835 | 0.879956 | 8.15E-70 | -1.69E-46 |
| MS.gene060565 | MS.gene58835 | 0.870527 | 1.36E-66 | -1.69E-46 |
| MS.gene06057 | MS.gene58835 | 0.816841 | 4.49E-52 | -1.69E-46 |
| MS.gene06064 | MS.gene58835 | 0.807153 | 5.81E-50 | -1.69E-46 |
| MS.gene06093 | MS.gene58835 | 0.912497 | 1.82E-83 | -1.69E-46 |
| MS.gene061099 | MS.gene58835 | 0.877237 | 7.38E-69 | -1.69E-46 |
| MS.gene061260 | MS.gene58835 | 0.888877 | 4.00E-73 | -1.69E-46 |
PPI:
| Gene1 | Gene2 | Type |
|---|---|---|
| MS.gene55900 | MS.gene58835 | PPI |
| MS.gene28739 | MS.gene58835 | PPI |
| MS.gene68361 | MS.gene58835 | PPI |
| MS.gene00474 | MS.gene58835 | PPI |
| MS.gene36424 | MS.gene58835 | PPI |
| MS.gene65301 | MS.gene58835 | PPI |
| MS.gene58835 | MS.gene028366 | PPI |
| MS.gene58835 | MS.gene24450 | PPI |
| MS.gene67884 | MS.gene58835 | PPI |
| MS.gene35086 | MS.gene58835 | PPI |
| MS.gene00478 | MS.gene58835 | PPI |
| MS.gene64859 | MS.gene58835 | PPI |
| MS.gene67555 | MS.gene58835 | PPI |
| MS.gene58835 | MS.gene044085 | PPI |
| MS.gene58835 | MS.gene00063 | PPI |
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene58835.t1 | MTR_7g089080 | 98.048 | 461 | 8 | 1 | 1 | 461 | 1 | 460 | 0.0 | 926 |
| MS.gene58835.t1 | MTR_5g088980 | 53.463 | 462 | 164 | 14 | 1 | 456 | 1 | 417 | 1.88e-152 | 440 |
| MS.gene58835.t1 | MTR_8g074000 | 47.670 | 279 | 133 | 4 | 183 | 457 | 159 | 428 | 1.83e-84 | 266 |
| MS.gene58835.t1 | MTR_5g023790 | 46.403 | 278 | 138 | 3 | 183 | 457 | 155 | 424 | 6.04e-83 | 262 |
| MS.gene58835.t1 | MTR_5g023790 | 48.085 | 235 | 111 | 3 | 183 | 414 | 155 | 381 | 5.63e-72 | 232 |
| MS.gene58835.t1 | MTR_1g011470 | 41.392 | 273 | 155 | 5 | 183 | 452 | 145 | 415 | 2.38e-62 | 208 |
| MS.gene58835.t1 | MTR_3g088415 | 39.007 | 282 | 161 | 8 | 179 | 453 | 220 | 497 | 1.57e-57 | 198 |
| MS.gene58835.t1 | MTR_3g107970 | 39.636 | 275 | 157 | 7 | 183 | 452 | 197 | 467 | 3.38e-57 | 196 |
| MS.gene58835.t1 | MTR_1g018680 | 40.154 | 259 | 145 | 6 | 200 | 451 | 91 | 346 | 9.08e-55 | 187 |
| MS.gene58835.t1 | MTR_5g023790 | 51.235 | 162 | 78 | 1 | 183 | 343 | 155 | 316 | 1.88e-52 | 181 |
| MS.gene58835.t1 | MTR_2g102550 | 38.276 | 290 | 168 | 8 | 168 | 450 | 134 | 419 | 5.72e-52 | 181 |
| MS.gene58835.t1 | MTR_3g061680 | 38.783 | 263 | 149 | 5 | 193 | 450 | 15 | 270 | 1.31e-51 | 176 |
| MS.gene58835.t1 | MTR_3g088405 | 36.765 | 272 | 161 | 9 | 176 | 440 | 220 | 487 | 1.31e-51 | 182 |
| MS.gene58835.t1 | MTR_3g088415 | 42.396 | 217 | 119 | 5 | 179 | 392 | 220 | 433 | 2.84e-51 | 180 |
| MS.gene58835.t1 | MTR_3g060770 | 40.486 | 247 | 135 | 6 | 199 | 440 | 31 | 270 | 9.42e-51 | 174 |
| MS.gene58835.t1 | MTR_2g102520 | 36.842 | 285 | 171 | 7 | 178 | 456 | 194 | 475 | 2.51e-50 | 178 |
| MS.gene58835.t1 | MTR_3g102520 | 36.641 | 262 | 160 | 5 | 200 | 456 | 91 | 351 | 2.02e-48 | 170 |
| MS.gene58835.t1 | MTR_3g060820 | 38.132 | 257 | 147 | 6 | 199 | 450 | 21 | 270 | 3.34e-48 | 167 |
| MS.gene58835.t1 | MTR_3g060400 | 37.354 | 257 | 149 | 5 | 199 | 450 | 27 | 276 | 3.17e-47 | 164 |
| MS.gene58835.t1 | MTR_3g460990 | 37.354 | 257 | 149 | 5 | 199 | 450 | 27 | 276 | 3.17e-47 | 164 |
| MS.gene58835.t1 | MTR_3g102510 | 35.000 | 260 | 165 | 4 | 200 | 456 | 74 | 332 | 4.85e-47 | 166 |
| MS.gene58835.t1 | MTR_3g060410 | 39.301 | 229 | 132 | 3 | 226 | 450 | 130 | 355 | 4.16e-45 | 161 |
| MS.gene58835.t1 | MTR_5g044040 | 92.208 | 77 | 6 | 0 | 253 | 329 | 7 | 83 | 7.57e-45 | 153 |
| MS.gene58835.t1 | MTR_5g044040 | 60.938 | 64 | 17 | 1 | 407 | 462 | 60 | 123 | 4.69e-17 | 77.8 |
| MS.gene58835.t1 | MTR_3g102560 | 36.905 | 252 | 148 | 6 | 205 | 451 | 69 | 314 | 1.03e-41 | 151 |
| MS.gene58835.t1 | MTR_3g102530 | 33.577 | 274 | 167 | 5 | 181 | 451 | 78 | 339 | 5.56e-41 | 150 |
| MS.gene58835.t1 | MTR_3g088415 | 44.311 | 167 | 90 | 3 | 179 | 343 | 220 | 385 | 4.67e-40 | 148 |
| MS.gene58835.t1 | MTR_6g045270 | 37.687 | 268 | 142 | 8 | 199 | 457 | 45 | 296 | 4.61e-39 | 144 |
| MS.gene58835.t1 | MTR_5g011900 | 38.158 | 228 | 130 | 3 | 150 | 371 | 18 | 240 | 1.05e-36 | 135 |
| MS.gene58835.t1 | MTR_3g102540 | 33.594 | 256 | 156 | 7 | 204 | 452 | 13 | 261 | 2.01e-35 | 133 |
| MS.gene58835.t1 | MTR_2g005960 | 36.364 | 132 | 68 | 3 | 176 | 291 | 97 | 228 | 2.96e-19 | 87.0 |
| MS.gene58835.t1 | MTR_1g032850 | 30.366 | 191 | 121 | 6 | 230 | 416 | 370 | 552 | 1.90e-14 | 75.9 |
| MS.gene58835.t1 | MTR_3g103080 | 31.356 | 118 | 78 | 1 | 230 | 344 | 65 | 182 | 5.59e-12 | 67.0 |
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene58835.t1 | AT5G06150 | 55.022 | 458 | 169 | 9 | 12 | 461 | 9 | 437 | 6.71e-159 | 457 |
| MS.gene58835.t1 | AT3G11520 | 55.677 | 458 | 154 | 13 | 1 | 457 | 1 | 410 | 3.13e-153 | 442 |
| MS.gene58835.t1 | AT4G37490 | 52.654 | 471 | 159 | 14 | 1 | 457 | 2 | 422 | 2.68e-140 | 409 |
| MS.gene58835.t1 | AT3G11520 | 56.145 | 415 | 133 | 13 | 1 | 414 | 1 | 367 | 1.20e-137 | 401 |
| MS.gene58835.t1 | AT2G26760 | 54.622 | 357 | 146 | 7 | 98 | 451 | 34 | 377 | 2.58e-125 | 370 |
| MS.gene58835.t1 | AT5G06150 | 55.294 | 340 | 121 | 7 | 12 | 343 | 9 | 325 | 4.30e-110 | 329 |
| MS.gene58835.t1 | AT1G76310 | 39.529 | 425 | 204 | 10 | 38 | 458 | 56 | 431 | 4.89e-91 | 283 |
| MS.gene58835.t1 | AT1G20610 | 38.293 | 457 | 216 | 10 | 21 | 457 | 19 | 429 | 1.25e-90 | 282 |
| MS.gene58835.t1 | AT1G76310 | 37.086 | 453 | 204 | 11 | 38 | 458 | 56 | 459 | 7.30e-85 | 268 |
| MS.gene58835.t1 | AT1G16330 | 41.883 | 308 | 166 | 5 | 155 | 458 | 350 | 648 | 3.29e-80 | 261 |
| MS.gene58835.t1 | AT1G76310 | 39.370 | 381 | 178 | 10 | 38 | 414 | 56 | 387 | 1.67e-78 | 249 |
| MS.gene58835.t1 | AT2G17620 | 48.921 | 278 | 131 | 3 | 183 | 457 | 154 | 423 | 2.68e-78 | 250 |
| MS.gene58835.t1 | AT1G34460 | 45.882 | 340 | 111 | 9 | 12 | 343 | 121 | 395 | 1.58e-75 | 245 |
| MS.gene58835.t1 | AT1G34460 | 45.882 | 340 | 111 | 9 | 12 | 343 | 121 | 395 | 2.34e-75 | 244 |
| MS.gene58835.t1 | AT1G34460 | 45.882 | 340 | 111 | 9 | 12 | 343 | 121 | 395 | 2.34e-75 | 244 |
| MS.gene58835.t1 | AT1G34460 | 45.882 | 340 | 111 | 9 | 12 | 343 | 121 | 395 | 2.34e-75 | 244 |
| MS.gene58835.t1 | AT1G34460 | 45.882 | 340 | 111 | 9 | 12 | 343 | 121 | 395 | 2.34e-75 | 244 |
| MS.gene58835.t1 | AT1G34460 | 45.294 | 340 | 110 | 8 | 12 | 343 | 121 | 392 | 2.80e-75 | 244 |
| MS.gene58835.t1 | AT1G34460 | 45.294 | 340 | 110 | 8 | 12 | 343 | 121 | 392 | 2.80e-75 | 244 |
| MS.gene58835.t1 | AT1G34460 | 45.882 | 340 | 111 | 9 | 12 | 343 | 121 | 395 | 3.31e-75 | 244 |
| MS.gene58835.t1 | AT1G34460 | 45.690 | 348 | 112 | 11 | 6 | 343 | 101 | 381 | 9.16e-75 | 243 |
| MS.gene58835.t1 | AT4G35620 | 47.292 | 277 | 139 | 3 | 183 | 458 | 155 | 425 | 1.41e-74 | 241 |
| MS.gene58835.t1 | AT4G35620 | 49.785 | 233 | 110 | 3 | 183 | 414 | 155 | 381 | 5.48e-65 | 214 |
| MS.gene58835.t1 | AT1G44110 | 40.221 | 271 | 155 | 6 | 182 | 448 | 177 | 444 | 6.62e-61 | 206 |
| MS.gene58835.t1 | AT1G80370 | 38.790 | 281 | 166 | 6 | 173 | 450 | 172 | 449 | 2.33e-59 | 202 |
| MS.gene58835.t1 | AT1G77390 | 42.045 | 264 | 144 | 7 | 182 | 440 | 161 | 420 | 4.55e-59 | 200 |
| MS.gene58835.t1 | AT1G76310 | 39.032 | 310 | 142 | 8 | 38 | 343 | 56 | 322 | 7.26e-59 | 197 |
| MS.gene58835.t1 | AT5G25380 | 38.351 | 279 | 165 | 6 | 182 | 456 | 156 | 431 | 4.18e-57 | 195 |
| MS.gene58835.t1 | AT5G25380 | 38.351 | 279 | 165 | 6 | 182 | 456 | 156 | 431 | 4.18e-57 | 195 |
| MS.gene58835.t1 | AT5G25380 | 38.351 | 279 | 165 | 6 | 182 | 456 | 162 | 437 | 5.33e-57 | 195 |
| MS.gene58835.t1 | AT5G25380 | 39.544 | 263 | 152 | 6 | 182 | 440 | 156 | 415 | 3.02e-56 | 192 |
| MS.gene58835.t1 | AT5G11300 | 39.427 | 279 | 162 | 6 | 182 | 456 | 155 | 430 | 4.73e-56 | 192 |
| MS.gene58835.t1 | AT5G43080 | 36.462 | 277 | 162 | 6 | 185 | 456 | 73 | 340 | 6.72e-55 | 187 |
| MS.gene58835.t1 | AT1G47210 | 38.129 | 278 | 163 | 7 | 185 | 456 | 88 | 362 | 1.30e-54 | 187 |
| MS.gene58835.t1 | AT5G43080 | 35.816 | 282 | 162 | 6 | 185 | 456 | 73 | 345 | 5.83e-54 | 184 |
| MS.gene58835.t1 | AT1G15570 | 36.242 | 298 | 183 | 6 | 164 | 456 | 151 | 446 | 7.74e-54 | 187 |
| MS.gene58835.t1 | AT1G47220 | 39.427 | 279 | 158 | 8 | 185 | 456 | 42 | 316 | 3.62e-53 | 181 |
| MS.gene58835.t1 | AT1G47230 | 39.256 | 242 | 144 | 3 | 219 | 458 | 117 | 357 | 1.17e-51 | 179 |
| MS.gene58835.t1 | AT1G20590 | 47.159 | 176 | 87 | 2 | 257 | 432 | 63 | 232 | 8.15e-51 | 173 |
| MS.gene58835.t1 | AT1G47230 | 39.095 | 243 | 144 | 4 | 219 | 458 | 117 | 358 | 6.88e-50 | 174 |
| MS.gene58835.t1 | AT5G11300 | 43.779 | 217 | 116 | 5 | 182 | 395 | 155 | 368 | 2.20e-49 | 174 |
| MS.gene58835.t1 | AT1G47210 | 42.453 | 106 | 56 | 4 | 185 | 286 | 88 | 192 | 4.08e-20 | 88.6 |
| MS.gene58835.t1 | AT1G14750 | 29.231 | 195 | 127 | 5 | 230 | 420 | 385 | 572 | 1.76e-15 | 79.3 |
| MS.gene58835.t1 | AT1G14750 | 29.744 | 195 | 126 | 5 | 230 | 420 | 385 | 572 | 1.81e-15 | 79.3 |
| MS.gene58835.t1 | AT1G14750 | 28.718 | 195 | 128 | 4 | 230 | 420 | 217 | 404 | 5.27e-15 | 77.0 |
| MS.gene58835.t1 | AT1G14750 | 28.718 | 195 | 127 | 5 | 230 | 420 | 217 | 403 | 3.02e-14 | 74.7 |
Find 110 sgRNAs with CRISPR-Local
Find 142 sgRNAs with CRISPR-GE
CRISPR-Local
| sgRNA_sequence | on_target_score | Position | Region |
|---|---|---|---|
| ATTGTGAGATAAAGGGTTTC+AGG | 0.206490 | 7.3:-20382106 | None:intergenic |
| ACTTTCTTCTGAACAGGTTT+AGG | 0.221645 | 7.3:-20381473 | None:intergenic |
| GGAAATGTTGTCACACTAAA+AGG | 0.238632 | 7.3:+20381153 | MS.gene58835:CDS |
| CGTAGACCACTTCTTGATAT+TGG | 0.257214 | 7.3:+20381132 | MS.gene58835:CDS |
| CTCCTTGTGACAGGGCGATT+TGG | 0.266023 | 7.3:-20381189 | None:intergenic |
| CTTTCTTCTGAACAGGTTTA+GGG | 0.273791 | 7.3:-20381472 | None:intergenic |
| CTATGTTGATTGTGAGATAA+AGG | 0.290156 | 7.3:-20382114 | None:intergenic |
| CTCTGGGTTGTTGTTGTTGT+TGG | 0.304884 | 7.3:-20380751 | None:intergenic |
| GAAATCTGTGCACAAGAAAA+AGG | 0.325466 | 7.3:+20381559 | MS.gene58835:CDS |
| TGATGCATTATGCTACATTA+AGG | 0.329648 | 7.3:+20382458 | MS.gene58835:CDS |
| GCAGTGACTTTCTTCTGAAC+AGG | 0.349419 | 7.3:-20381479 | None:intergenic |
| GCTGAGGCAGCAAGCATTGA+TGG | 0.393892 | 7.3:-20382487 | None:intergenic |
| GGTAGCAGAAGTTTCTTTGC+CGG | 0.395605 | 7.3:-20382712 | None:intergenic |
| CTCATCCTCTCATTTATCTC+AGG | 0.404632 | 7.3:-20382031 | None:intergenic |
| TCAATAACTTCCACAGGCTT+AGG | 0.404728 | 7.3:-20381506 | None:intergenic |
| CAACTGTTCTTCGGAGTAAC+CGG | 0.407928 | 7.3:-20382575 | None:intergenic |
| CCATCCTAGGAAAGCTTGAA+TGG | 0.408581 | 7.3:+20382311 | MS.gene58835:CDS |
| CAGAAGAAGAACGGTGCAGC+AGG | 0.408866 | 7.3:+20381096 | MS.gene58835:CDS |
| GCTCCTCCTGTTGTTGCTGA+TGG | 0.409185 | 7.3:+20381416 | MS.gene58835:CDS |
| TCAATGTCAACAATCTCCTT+TGG | 0.409201 | 7.3:-20381791 | None:intergenic |
| TATGTTGATTGTGAGATAAA+GGG | 0.409760 | 7.3:-20382113 | None:intergenic |
| CATCAAAGTATGAAGAAATC+TGG | 0.422694 | 7.3:+20382212 | MS.gene58835:CDS |
| AGCAGTTGCTGAAAACAATA+AGG | 0.423523 | 7.3:+20381248 | MS.gene58835:CDS |
| TGCTGTTGCCGCGCTTCCAC+CGG | 0.426291 | 7.3:+20382693 | MS.gene58835:CDS |
| AACTGCTGCTGCTTGTGCAT+TGG | 0.426689 | 7.3:-20381232 | None:intergenic |
| TTACTCCGAAGAACAGTTGA+TGG | 0.428240 | 7.3:+20382579 | MS.gene58835:CDS |
| TGAAGTAAGTTCTGAAGAAA+AGG | 0.429447 | 7.3:+20381526 | MS.gene58835:CDS |
| GTCAAGAAGGGAACTTCAAT+TGG | 0.435390 | 7.3:+20382165 | MS.gene58835:CDS |
| TCACAATCAACATAGTTGAT+AGG | 0.445143 | 7.3:+20382122 | MS.gene58835:CDS |
| TTTCACTCAGGTGCTGAGAA+TGG | 0.447293 | 7.3:+20382625 | MS.gene58835:CDS |
| TGTTATAGGTGATGCTGCCT+TGG | 0.451586 | 7.3:+20381059 | MS.gene58835:intron |
| CCATTCAAGCTTTCCTAGGA+TGG | 0.453248 | 7.3:-20382311 | None:intergenic |
| AGAAGGGAACTTCAATTGGT+TGG | 0.459265 | 7.3:+20382169 | MS.gene58835:CDS |
| CTGTTGTTTCCCTCCTCCCA+AGG | 0.460174 | 7.3:-20381076 | None:intergenic |
| TGTTGTTGTTGGTGAACAAT+GGG | 0.462538 | 7.3:-20380740 | None:intergenic |
| GATGGATTGTGCTAGGTTGT+TGG | 0.467847 | 7.3:+20382597 | MS.gene58835:CDS |
| CATTGAGCAAGACTCCTGTT+TGG | 0.470579 | 7.3:+20382530 | MS.gene58835:CDS |
| TTGTTGTTGTTGGTGAACAA+TGG | 0.480167 | 7.3:-20380741 | None:intergenic |
| GTTCCTGGTTCGTTTCATCA+AGG | 0.481189 | 7.3:+20382360 | MS.gene58835:CDS |
| AAGTCCATTCAAGCTTTCCT+AGG | 0.481341 | 7.3:-20382315 | None:intergenic |
| GGTGATGCTGCCTTGGGAGG+AGG | 0.482861 | 7.3:+20381066 | MS.gene58835:intron |
| AGGAATACTCATTGATTGGC+TGG | 0.482890 | 7.3:+20382054 | MS.gene58835:CDS |
| TTGAGTGTCTCATTCCAAAC+AGG | 0.483773 | 7.3:-20382544 | None:intergenic |
| CTGTCAACCTTGTGTCAAGA+AGG | 0.491215 | 7.3:+20382152 | MS.gene58835:CDS |
| TGAGAGGAATACTCATTGAT+TGG | 0.498998 | 7.3:+20382050 | MS.gene58835:CDS |
| CTTACTTCAATAACTTCCAC+AGG | 0.506470 | 7.3:-20381512 | None:intergenic |
| GAAGAAGAACGGTGCAGCAG+GGG | 0.508581 | 7.3:+20381098 | MS.gene58835:CDS |
| GCAACTCCATCAGCAACAAC+AGG | 0.508824 | 7.3:-20381422 | None:intergenic |
| ACAATCCATCAACTGTTCTT+CGG | 0.510480 | 7.3:-20382584 | None:intergenic |
| TCTGCTACCTGCTGCTGTGT+AGG | 0.513893 | 7.3:+20382726 | MS.gene58835:CDS |
| TCTGCAGTTCCTTCTGATCA+AGG | 0.516928 | 7.3:+20382394 | MS.gene58835:CDS |
| ACAACAGGAGGAGCAGGTCC+AGG | 0.526077 | 7.3:-20381407 | None:intergenic |
| TCAAGGGGATTTCGAGATGA+TGG | 0.530227 | 7.3:+20382411 | MS.gene58835:CDS |
| GTGATGCTGCCTTGGGAGGA+GGG | 0.530719 | 7.3:+20381067 | MS.gene58835:CDS |
| AAGAACGGTGCAGCAGGGGA+AGG | 0.535783 | 7.3:+20381102 | MS.gene58835:CDS |
| AAACGAACCAGGAACACAAA+AGG | 0.537440 | 7.3:-20382352 | None:intergenic |
| GTTATAGGTGATGCTGCCTT+GGG | 0.538221 | 7.3:+20381060 | MS.gene58835:intron |
| TCGAAATCCCCTTGATCAGA+AGG | 0.543161 | 7.3:-20382403 | None:intergenic |
| GAGAGAACCTACACAGCAGC+AGG | 0.545039 | 7.3:-20382733 | None:intergenic |
| CAATATCAAGAAGTGGTCTA+CGG | 0.545242 | 7.3:-20381131 | None:intergenic |
| TCAGCAACAACAGGAGGAGC+AGG | 0.545915 | 7.3:-20381413 | None:intergenic |
| AGTGGCTAGAAGAGTGGTGG+TGG | 0.553511 | 7.3:+20381448 | MS.gene58835:CDS |
| TTGACACAAGGTTGACAGCA+AGG | 0.554809 | 7.3:-20382147 | None:intergenic |
| ACGGTGCAGCAGGGGAAGGA+AGG | 0.557061 | 7.3:+20381106 | MS.gene58835:CDS |
| CTGCAGTTCCTTCTGATCAA+GGG | 0.565046 | 7.3:+20382395 | MS.gene58835:CDS |
| GCTTGTGTCAATGTGGCACC+TGG | 0.568366 | 7.3:+20381389 | MS.gene58835:CDS |
| TGCAGTTCCTTCTGATCAAG+GGG | 0.571084 | 7.3:+20382396 | MS.gene58835:CDS |
| AGCCAAATCGCCCTGTCACA+AGG | 0.571983 | 7.3:+20381187 | MS.gene58835:CDS |
| GAGATTGTTGACATTGATGC+TGG | 0.574052 | 7.3:+20381797 | MS.gene58835:CDS |
| TGCTGATGGAGTTGCAGCAG+TGG | 0.577732 | 7.3:+20381430 | MS.gene58835:CDS |
| AACAGTTGATGGATTGTGCT+AGG | 0.577876 | 7.3:+20382590 | MS.gene58835:CDS |
| TGCAGCAGTGGCTAGAAGAG+TGG | 0.581805 | 7.3:+20381442 | MS.gene58835:CDS |
| TTTCTTTGCCGGTGGAAGCG+CGG | 0.582062 | 7.3:-20382701 | None:intergenic |
| CACACAAAGTCATTAACCTC+AGG | 0.586086 | 7.3:-20382238 | None:intergenic |
| AAGCCGTCCACATGATTACA+TGG | 0.589639 | 7.3:+20382000 | MS.gene58835:CDS |
| TCATGAACAGATTCTCGTCA+TGG | 0.593660 | 7.3:+20382282 | MS.gene58835:CDS |
| ATAGGTGATGCTGCCTTGGG+AGG | 0.594991 | 7.3:+20381063 | MS.gene58835:intron |
| TGTCCTCACTGCTAGAAGCA+AGG | 0.595514 | 7.3:+20381625 | MS.gene58835:CDS |
| GAAGTTCCCTTCTTGACACA+AGG | 0.595803 | 7.3:-20382159 | None:intergenic |
| AAGTACTCTGATCCTCAGAA+AGG | 0.596937 | 7.3:+20382670 | MS.gene58835:CDS |
| GAGACACTCAAGATGCATAC+CGG | 0.598392 | 7.3:+20382556 | MS.gene58835:CDS |
| GTCATGGAGAAAACCATCCT+AGG | 0.598998 | 7.3:+20382298 | MS.gene58835:CDS |
| AGCAGAAGTTTCTTTGCCGG+TGG | 0.599208 | 7.3:-20382709 | None:intergenic |
| CAGCCTTGATGAAACGAACC+AGG | 0.601116 | 7.3:-20382363 | None:intergenic |
| CACTGCAAAACCTAAGCCTG+TGG | 0.603311 | 7.3:+20381496 | MS.gene58835:CDS |
| CCTTGCTGCATAGACTGCTG+AGG | 0.603952 | 7.3:-20382503 | None:intergenic |
| TGGAATCAGTGCCATGCTGA+TGG | 0.608887 | 7.3:+20382189 | MS.gene58835:CDS |
| GAGATAAATGAGAGGATGAG+AGG | 0.614173 | 7.3:+20382034 | MS.gene58835:CDS |
| TGCGAGTCCATGTAATCATG+TGG | 0.618416 | 7.3:-20382007 | None:intergenic |
| ACCAGGAACACAAAAGGTGT+CGG | 0.622367 | 7.3:-20382346 | None:intergenic |
| TTTCTTCTGAACAGGTTTAG+GGG | 0.626802 | 7.3:-20381471 | None:intergenic |
| AGAAGAAGAACGGTGCAGCA+GGG | 0.627002 | 7.3:+20381097 | MS.gene58835:CDS |
| AGTCCATGTAATCATGTGGA+CGG | 0.628216 | 7.3:-20382003 | None:intergenic |
| ATACTTTGATGCCATCAGCA+TGG | 0.630020 | 7.3:-20382200 | None:intergenic |
| ACAAAGTCATTAACCTCAGG+TGG | 0.630280 | 7.3:-20382235 | None:intergenic |
| ACATTTCCAATATCAAGAAG+TGG | 0.631314 | 7.3:-20381138 | None:intergenic |
| CGCAACCTGAGATAAATGAG+AGG | 0.636305 | 7.3:+20382026 | MS.gene58835:CDS |
| TGTCAACCTTGTGTCAAGAA+GGG | 0.639776 | 7.3:+20382153 | MS.gene58835:CDS |
| GGGAAACAACAGAAGAAGAA+CGG | 0.643525 | 7.3:+20381087 | MS.gene58835:CDS |
| GCGGCAACAGCACCTTTCTG+AGG | 0.644637 | 7.3:-20382682 | None:intergenic |
| ACTCCATCAGCAACAACAGG+AGG | 0.651848 | 7.3:-20381419 | None:intergenic |
| GACTGTAAGCTCTATCTGAG+AGG | 0.659855 | 7.3:-20382261 | None:intergenic |
| CCTCAGCAGTCTATGCAGCA+AGG | 0.660855 | 7.3:+20382503 | MS.gene58835:CDS |
| TGCTGAGAATGGAAAGCTGA+AGG | 0.663287 | 7.3:+20382636 | MS.gene58835:CDS |
| TGAAGAAATCTGGCCACCTG+AGG | 0.663492 | 7.3:+20382222 | MS.gene58835:CDS |
| TGGTTTGACTAACAAACCAA+AGG | 0.666669 | 7.3:+20381775 | MS.gene58835:CDS |
| GAAACAAGCTTGTGTCAATG+TGG | 0.703443 | 7.3:+20381382 | MS.gene58835:intron |
| AGCAGTGGCTAGAAGAGTGG+TGG | 0.705939 | 7.3:+20381445 | MS.gene58835:CDS |
| CAAGTTCTACAAGATAGTTG+AGG | 0.706527 | 7.3:+20381868 | MS.gene58835:CDS |
| AAACCTTGCTTCTAGCAGTG+AGG | 0.715110 | 7.3:-20381628 | None:intergenic |
CRISPR-GE
| badsite warning | sgRNA_sequence | Strand | Position | Region | GC_content |
|---|---|---|---|---|---|
| !!! | TAAAAAGTTTCGATTTTTTA+GGG | + | chr7.3:20380961-20380980 | MS.gene58835:intron | 15.0% |
| !!! | TTAAAAAGTTTCGATTTTTT+AGG | + | chr7.3:20380960-20380979 | MS.gene58835:intron | 15.0% |
| !!! | ACTTTTTAAGATTTATCATC+TGG | - | chr7.3:20380949-20380968 | None:intergenic | 20.0% |
| !!! | CTTTTTAAGATTTATCATCT+GGG | - | chr7.3:20380948-20380967 | None:intergenic | 20.0% |
| !!! | TTTATGGTTTTATTTATCCT+GGG | + | chr7.3:20380805-20380824 | MS.gene58835:intron | 20.0% |
| ! | ACTTTGAGTAAAATAGTTTC+TGG | + | chr7.3:20380854-20380873 | MS.gene58835:intron | 25.0% |
| ! | CTTTGAGTAAAATAGTTTCT+GGG | + | chr7.3:20380855-20380874 | MS.gene58835:intron | 25.0% |
| ! | TTGCATCAAATCTAGTAAAA+GGG | + | chr7.3:20380986-20381005 | MS.gene58835:intron | 25.0% |
| ! | TTTGCATCAAATCTAGTAAA+AGG | + | chr7.3:20380985-20381004 | MS.gene58835:intron | 25.0% |
| !! | ATTCTCTTTTACATGTTCTT+TGG | + | chr7.3:20381712-20381731 | MS.gene58835:intron | 25.0% |
| !! | TATGTTGATTGTGAGATAAA+GGG | - | chr7.3:20382116-20382135 | None:intergenic | 25.0% |
| !!! | CTTCAATCATTGATTCTTTA+TGG | + | chr7.3:20380789-20380808 | MS.gene58835:intron | 25.0% |
| !!! | CTTTATGGTTTTATTTATCC+TGG | + | chr7.3:20380804-20380823 | MS.gene58835:intron | 25.0% |
| !!! | TGATGATTATTTTCTGAGAT+TGG | + | chr7.3:20381332-20381351 | MS.gene58835:intron | 25.0% |
| ACATTTCCAATATCAAGAAG+TGG | - | chr7.3:20381141-20381160 | None:intergenic | 30.0% | |
| ATTGAAAGATCTTGCAAATC+TGG | + | chr7.3:20380908-20380927 | MS.gene58835:intron | 30.0% | |
| CACAAACAAACATCAAAAAC+AGG | - | chr7.3:20381036-20381055 | None:intergenic | 30.0% | |
| CATCAAAGTATGAAGAAATC+TGG | + | chr7.3:20382212-20382231 | MS.gene58835:CDS | 30.0% | |
| GTTTGTTTGTGCAATGTTAT+AGG | + | chr7.3:20381045-20381064 | MS.gene58835:intron | 30.0% | |
| TCACAATCAACATAGTTGAT+AGG | + | chr7.3:20382122-20382141 | MS.gene58835:CDS | 30.0% | |
| TGATGCATTATGCTACATTA+AGG | + | chr7.3:20382458-20382477 | MS.gene58835:CDS | 30.0% | |
| TTGAAAGATCTTGCAAATCT+GGG | + | chr7.3:20380909-20380928 | MS.gene58835:intron | 30.0% | |
| ! | CTATGTTGATTGTGAGATAA+AGG | - | chr7.3:20382117-20382136 | None:intergenic | 30.0% |
| ! | TGTTCTTTTCCTGTTCTTTT+AGG | + | chr7.3:20381745-20381764 | MS.gene58835:intron | 30.0% |
| !! | TGAAGTAAGTTCTGAAGAAA+AGG | + | chr7.3:20381526-20381545 | MS.gene58835:CDS | 30.0% |
| !!! | AAAAGGGTCTTGTTCTTTTT+TGG | + | chr7.3:20381002-20381021 | MS.gene58835:intron | 30.0% |
| ACAATCCATCAACTGTTCTT+CGG | - | chr7.3:20382587-20382606 | None:intergenic | 35.0% | |
| ACTTTCTTCTGAACAGGTTT+AGG | - | chr7.3:20381476-20381495 | None:intergenic | 35.0% | |
| AGAAAACACAAACAAACCTC+TGG | - | chr7.3:20380771-20380790 | None:intergenic | 35.0% | |
| AGAACAAAAACATTGAACCC+AGG | - | chr7.3:20380825-20380844 | None:intergenic | 35.0% | |
| AGCAGTTGCTGAAAACAATA+AGG | + | chr7.3:20381248-20381267 | MS.gene58835:CDS | 35.0% | |
| ATTGTGAGATAAAGGGTTTC+AGG | - | chr7.3:20382109-20382128 | None:intergenic | 35.0% | |
| CAAGTTCTACAAGATAGTTG+AGG | + | chr7.3:20381868-20381887 | MS.gene58835:CDS | 35.0% | |
| CAATATCAAGAAGTGGTCTA+CGG | - | chr7.3:20381134-20381153 | None:intergenic | 35.0% | |
| CTTACTTCAATAACTTCCAC+AGG | - | chr7.3:20381515-20381534 | None:intergenic | 35.0% | |
| CTTTCTTCTGAACAGGTTTA+GGG | - | chr7.3:20381475-20381494 | None:intergenic | 35.0% | |
| GAAAACACAAACAAACCTCT+GGG | - | chr7.3:20380770-20380789 | None:intergenic | 35.0% | |
| GAAATCTGTGCACAAGAAAA+AGG | + | chr7.3:20381559-20381578 | MS.gene58835:CDS | 35.0% | |
| GGAAATGTTGTCACACTAAA+AGG | + | chr7.3:20381153-20381172 | MS.gene58835:CDS | 35.0% | |
| TCAATGTCAACAATCTCCTT+TGG | - | chr7.3:20381794-20381813 | None:intergenic | 35.0% | |
| TGAGAGGAATACTCATTGAT+TGG | + | chr7.3:20382050-20382069 | MS.gene58835:CDS | 35.0% | |
| TGGTTTGACTAACAAACCAA+AGG | + | chr7.3:20381775-20381794 | MS.gene58835:CDS | 35.0% | |
| TTTCTTCTGAACAGGTTTAG+GGG | - | chr7.3:20381474-20381493 | None:intergenic | 35.0% | |
| ! | GAGTAAAATAGTTTCTGGGT+TGG | + | chr7.3:20380859-20380878 | MS.gene58835:intron | 35.0% |
| ! | TGTTGTTGTTGGTGAACAAT+GGG | - | chr7.3:20380743-20380762 | None:intergenic | 35.0% |
| ! | TTGTTGTTGTTGGTGAACAA+TGG | - | chr7.3:20380744-20380763 | None:intergenic | 35.0% |
| AAACGAACCAGGAACACAAA+AGG | - | chr7.3:20382355-20382374 | None:intergenic | 40.0% | |
| AAGTACTCTGATCCTCAGAA+AGG | + | chr7.3:20382670-20382689 | MS.gene58835:CDS | 40.0% | |
| AAGTCCATTCAAGCTTTCCT+AGG | - | chr7.3:20382318-20382337 | None:intergenic | 40.0% | |
| ACAAAGTCATTAACCTCAGG+TGG | - | chr7.3:20382238-20382257 | None:intergenic | 40.0% | |
| AGAAGGGAACTTCAATTGGT+TGG | + | chr7.3:20382169-20382188 | MS.gene58835:CDS | 40.0% | |
| AGTCCATGTAATCATGTGGA+CGG | - | chr7.3:20382006-20382025 | None:intergenic | 40.0% | |
| ATACTTTGATGCCATCAGCA+TGG | - | chr7.3:20382203-20382222 | None:intergenic | 40.0% | |
| CACAAAAACTCCTTGTGACA+GGG | - | chr7.3:20381200-20381219 | None:intergenic | 40.0% | |
| CACACAAAGTCATTAACCTC+AGG | - | chr7.3:20382241-20382260 | None:intergenic | 40.0% | |
| CGTAGACCACTTCTTGATAT+TGG | + | chr7.3:20381132-20381151 | MS.gene58835:CDS | 40.0% | |
| CTCATCCTCTCATTTATCTC+AGG | - | chr7.3:20382034-20382053 | None:intergenic | 40.0% | |
| GAAACAAGCTTGTGTCAATG+TGG | + | chr7.3:20381382-20381401 | MS.gene58835:intron | 40.0% | |
| GAGATAAATGAGAGGATGAG+AGG | + | chr7.3:20382034-20382053 | MS.gene58835:CDS | 40.0% | |
| GAGATTGTTGACATTGATGC+TGG | + | chr7.3:20381797-20381816 | MS.gene58835:CDS | 40.0% | |
| GGGAAACAACAGAAGAAGAA+CGG | + | chr7.3:20381087-20381106 | MS.gene58835:CDS | 40.0% | |
| GTCAAGAAGGGAACTTCAAT+TGG | + | chr7.3:20382165-20382184 | MS.gene58835:CDS | 40.0% | |
| TCAATAACTTCCACAGGCTT+AGG | - | chr7.3:20381509-20381528 | None:intergenic | 40.0% | |
| TCATGAACAGATTCTCGTCA+TGG | + | chr7.3:20382282-20382301 | MS.gene58835:CDS | 40.0% | |
| TGTCAACCTTGTGTCAAGAA+GGG | + | chr7.3:20382153-20382172 | MS.gene58835:CDS | 40.0% | |
| TTACTCCGAAGAACAGTTGA+TGG | + | chr7.3:20382579-20382598 | MS.gene58835:CDS | 40.0% | |
| TTGAGTGTCTCATTCCAAAC+AGG | - | chr7.3:20382547-20382566 | None:intergenic | 40.0% | |
| ! | AGGAATACTCATTGATTGGC+TGG | + | chr7.3:20382054-20382073 | MS.gene58835:CDS | 40.0% |
| ! | AGTGCGTGATGTTTTCTTCT+TGG | - | chr7.3:20381597-20381616 | None:intergenic | 40.0% |
| ! | GCTCATTTTCTCTCTGAGTT+GGG | + | chr7.3:20382433-20382452 | MS.gene58835:CDS | 40.0% |
| !! | AACAGTTGATGGATTGTGCT+AGG | + | chr7.3:20382590-20382609 | MS.gene58835:CDS | 40.0% |
| !! | CTAGAAGCAAGGTTTGTTGT+TGG | + | chr7.3:20381636-20381655 | MS.gene58835:intron | 40.0% |
| !! | TTGTTGGTGAGTTTTCACTC+AGG | + | chr7.3:20382613-20382632 | MS.gene58835:CDS | 40.0% |
| AAACCTTGCTTCTAGCAGTG+AGG | - | chr7.3:20381631-20381650 | None:intergenic | 45.0% | |
| AAGCCGTCCACATGATTACA+TGG | + | chr7.3:20382000-20382019 | MS.gene58835:CDS | 45.0% | |
| CAACAACAACAACAACCCAG+AGG | + | chr7.3:20380752-20380771 | MS.gene58835:CDS | 45.0% | |
| CAACTGTTCTTCGGAGTAAC+CGG | - | chr7.3:20382578-20382597 | None:intergenic | 45.0% | |
| CACATGCAGCCTAAAAGAAC+AGG | - | chr7.3:20381757-20381776 | None:intergenic | 45.0% | |
| CATTGAGCAAGACTCCTGTT+TGG | + | chr7.3:20382530-20382549 | MS.gene58835:CDS | 45.0% | |
| CCATCCTAGGAAAGCTTGAA+TGG | + | chr7.3:20382311-20382330 | MS.gene58835:CDS | 45.0% | |
| CCATTCAAGCTTTCCTAGGA+TGG | - | chr7.3:20382314-20382333 | None:intergenic | 45.0% | |
| CGCAACCTGAGATAAATGAG+AGG | + | chr7.3:20382026-20382045 | MS.gene58835:CDS | 45.0% | |
| CTGCAGTTCCTTCTGATCAA+GGG | + | chr7.3:20382395-20382414 | MS.gene58835:CDS | 45.0% | |
| CTGTCAACCTTGTGTCAAGA+AGG | + | chr7.3:20382152-20382171 | MS.gene58835:CDS | 45.0% | |
| GAAGTTCCCTTCTTGACACA+AGG | - | chr7.3:20382162-20382181 | None:intergenic | 45.0% | |
| GACTGTAAGCTCTATCTGAG+AGG | - | chr7.3:20382264-20382283 | None:intergenic | 45.0% | |
| GAGACACTCAAGATGCATAC+CGG | + | chr7.3:20382556-20382575 | MS.gene58835:CDS | 45.0% | |
| GCACAAAAACTCCTTGTGAC+AGG | - | chr7.3:20381201-20381220 | None:intergenic | 45.0% | |
| GCAGTGACTTTCTTCTGAAC+AGG | - | chr7.3:20381482-20381501 | None:intergenic | 45.0% | |
| GGTAGCAGAAGTTTCTTTGC+CGG | - | chr7.3:20382715-20382734 | None:intergenic | 45.0% | |
| GTCATGGAGAAAACCATCCT+AGG | + | chr7.3:20382298-20382317 | MS.gene58835:CDS | 45.0% | |
| GTTATAGGTGATGCTGCCTT+GGG | + | chr7.3:20381060-20381079 | MS.gene58835:intron | 45.0% | |
| TCAAGGGGATTTCGAGATGA+TGG | + | chr7.3:20382411-20382430 | MS.gene58835:CDS | 45.0% | |
| TCGAAATCCCCTTGATCAGA+AGG | - | chr7.3:20382406-20382425 | None:intergenic | 45.0% | |
| TCTGCAGTTCCTTCTGATCA+AGG | + | chr7.3:20382394-20382413 | MS.gene58835:CDS | 45.0% | |
| TGCAGTTCCTTCTGATCAAG+GGG | + | chr7.3:20382396-20382415 | MS.gene58835:CDS | 45.0% | |
| TGCGAGTCCATGTAATCATG+TGG | - | chr7.3:20382010-20382029 | None:intergenic | 45.0% | |
| TGCTGAGAATGGAAAGCTGA+AGG | + | chr7.3:20382636-20382655 | MS.gene58835:CDS | 45.0% | |
| TGTTATAGGTGATGCTGCCT+TGG | + | chr7.3:20381059-20381078 | MS.gene58835:intron | 45.0% | |
| TTGACACAAGGTTGACAGCA+AGG | - | chr7.3:20382150-20382169 | None:intergenic | 45.0% | |
| ! | ACCAGGAACACAAAAGGTGT+CGG | - | chr7.3:20382349-20382368 | None:intergenic | 45.0% |
| ! | CTCTGGGTTGTTGTTGTTGT+TGG | - | chr7.3:20380754-20380773 | None:intergenic | 45.0% |
| ! | CTGTTCTTTTAGGCTGCATG+TGG | + | chr7.3:20381755-20381774 | MS.gene58835:intron | 45.0% |
| ! | GGCTCATTTTCTCTCTGAGT+TGG | + | chr7.3:20382432-20382451 | MS.gene58835:CDS | 45.0% |
| ! | GTTCCTGGTTCGTTTCATCA+AGG | + | chr7.3:20382360-20382379 | MS.gene58835:CDS | 45.0% |
| !! | GATGGATTGTGCTAGGTTGT+TGG | + | chr7.3:20382597-20382616 | MS.gene58835:CDS | 45.0% |
| !! | TTTCACTCAGGTGCTGAGAA+TGG | + | chr7.3:20382625-20382644 | MS.gene58835:CDS | 45.0% |
| ACTCCATCAGCAACAACAGG+AGG | - | chr7.3:20381422-20381441 | None:intergenic | 50.0% | |
| AGAAGAAGAACGGTGCAGCA+GGG | + | chr7.3:20381097-20381116 | MS.gene58835:CDS | 50.0% | |
| AGCAGAAGTTTCTTTGCCGG+TGG | - | chr7.3:20382712-20382731 | None:intergenic | 50.0% | |
| CACTGCAAAACCTAAGCCTG+TGG | + | chr7.3:20381496-20381515 | MS.gene58835:CDS | 50.0% | |
| CAGCCTTGATGAAACGAACC+AGG | - | chr7.3:20382366-20382385 | None:intergenic | 50.0% | |
| GCAACTCCATCAGCAACAAC+AGG | - | chr7.3:20381425-20381444 | None:intergenic | 50.0% | |
| TGAAGAAATCTGGCCACCTG+AGG | + | chr7.3:20382222-20382241 | MS.gene58835:CDS | 50.0% | |
| TGGAATCAGTGCCATGCTGA+TGG | + | chr7.3:20382189-20382208 | MS.gene58835:CDS | 50.0% | |
| TGTCCTCACTGCTAGAAGCA+AGG | + | chr7.3:20381625-20381644 | MS.gene58835:CDS | 50.0% | |
| ! | AACTGCTGCTGCTTGTGCAT+TGG | - | chr7.3:20381235-20381254 | None:intergenic | 50.0% |
| AGCAGTGGCTAGAAGAGTGG+TGG | + | chr7.3:20381445-20381464 | MS.gene58835:CDS | 55.0% | |
| AGCCAAATCGCCCTGTCACA+AGG | + | chr7.3:20381187-20381206 | MS.gene58835:CDS | 55.0% | |
| AGTGGCTAGAAGAGTGGTGG+TGG | + | chr7.3:20381448-20381467 | MS.gene58835:CDS | 55.0% | |
| ATAGGTGATGCTGCCTTGGG+AGG | + | chr7.3:20381063-20381082 | MS.gene58835:intron | 55.0% | |
| CAGAAGAAGAACGGTGCAGC+AGG | + | chr7.3:20381096-20381115 | MS.gene58835:CDS | 55.0% | |
| CCTCAGCAGTCTATGCAGCA+AGG | + | chr7.3:20382503-20382522 | MS.gene58835:CDS | 55.0% | |
| CCTTGCTGCATAGACTGCTG+AGG | - | chr7.3:20382506-20382525 | None:intergenic | 55.0% | |
| CTCCTTGTGACAGGGCGATT+TGG | - | chr7.3:20381192-20381211 | None:intergenic | 55.0% | |
| GAAGAAGAACGGTGCAGCAG+GGG | + | chr7.3:20381098-20381117 | MS.gene58835:CDS | 55.0% | |
| GCTCCTCCTGTTGTTGCTGA+TGG | + | chr7.3:20381416-20381435 | MS.gene58835:CDS | 55.0% | |
| GCTTGTGTCAATGTGGCACC+TGG | + | chr7.3:20381389-20381408 | MS.gene58835:CDS | 55.0% | |
| TCAGCAACAACAGGAGGAGC+AGG | - | chr7.3:20381416-20381435 | None:intergenic | 55.0% | |
| TGCAGCAGTGGCTAGAAGAG+TGG | + | chr7.3:20381442-20381461 | MS.gene58835:CDS | 55.0% | |
| TGCTGATGGAGTTGCAGCAG+TGG | + | chr7.3:20381430-20381449 | MS.gene58835:CDS | 55.0% | |
| TTTCTTTGCCGGTGGAAGCG+CGG | - | chr7.3:20382704-20382723 | None:intergenic | 55.0% | |
| ! | GCCGACACCTTTTGTGTTCC+TGG | + | chr7.3:20382345-20382364 | MS.gene58835:CDS | 55.0% |
| !! | CTGTTGTTTCCCTCCTCCCA+AGG | - | chr7.3:20381079-20381098 | None:intergenic | 55.0% |
| !! | GCTGAGGCAGCAAGCATTGA+TGG | - | chr7.3:20382490-20382509 | None:intergenic | 55.0% |
| AAGAACGGTGCAGCAGGGGA+AGG | + | chr7.3:20381102-20381121 | MS.gene58835:CDS | 60.0% | |
| ACAACAGGAGGAGCAGGTCC+AGG | - | chr7.3:20381410-20381429 | None:intergenic | 60.0% | |
| GCGGCAACAGCACCTTTCTG+AGG | - | chr7.3:20382685-20382704 | None:intergenic | 60.0% | |
| GTGATGCTGCCTTGGGAGGA+GGG | + | chr7.3:20381067-20381086 | MS.gene58835:CDS | 60.0% | |
| ACGGTGCAGCAGGGGAAGGA+AGG | + | chr7.3:20381106-20381125 | MS.gene58835:CDS | 65.0% | |
| GGTGATGCTGCCTTGGGAGG+AGG | + | chr7.3:20381066-20381085 | MS.gene58835:intron | 65.0% | |
| TGCTGTTGCCGCGCTTCCAC+CGG | + | chr7.3:20382693-20382712 | MS.gene58835:CDS | 65.0% |
| Chromosome | Type | Strat | End | Strand | Name |
|---|---|---|---|---|---|
| chr7.3 | gene | 20380728 | 20382747 | 20380728 | ID=MS.gene58835 |
| chr7.3 | mRNA | 20380728 | 20382747 | 20380728 | ID=MS.gene58835.t1;Parent=MS.gene58835 |
| chr7.3 | exon | 20380728 | 20380773 | 20380728 | ID=MS.gene58835.t1.exon1;Parent=MS.gene58835.t1 |
| chr7.3 | CDS | 20380728 | 20380773 | 20380728 | ID=cds.MS.gene58835.t1;Parent=MS.gene58835.t1 |
| chr7.3 | exon | 20381067 | 20381269 | 20381067 | ID=MS.gene58835.t1.exon2;Parent=MS.gene58835.t1 |
| chr7.3 | CDS | 20381067 | 20381269 | 20381067 | ID=cds.MS.gene58835.t1;Parent=MS.gene58835.t1 |
| chr7.3 | exon | 20381383 | 20381646 | 20381383 | ID=MS.gene58835.t1.exon3;Parent=MS.gene58835.t1 |
| chr7.3 | CDS | 20381383 | 20381646 | 20381383 | ID=cds.MS.gene58835.t1;Parent=MS.gene58835.t1 |
| chr7.3 | exon | 20381767 | 20381889 | 20381767 | ID=MS.gene58835.t1.exon4;Parent=MS.gene58835.t1 |
| chr7.3 | CDS | 20381767 | 20381889 | 20381767 | ID=cds.MS.gene58835.t1;Parent=MS.gene58835.t1 |
| chr7.3 | exon | 20381995 | 20382747 | 20381995 | ID=MS.gene58835.t1.exon5;Parent=MS.gene58835.t1 |
| chr7.3 | CDS | 20381995 | 20382747 | 20381995 | ID=cds.MS.gene58835.t1;Parent=MS.gene58835.t1 |
| Gene Sequence |
| Protein sequence |
