AlfalfaGEDB | MS.gene019181

M. sativa cultivar XinJiangDaYe / MS.gene019181

KEGG: K00799
GO: GO:0003674 GO:0005488 GO:0005515
PFAM: PF00043.28 PF02798.23

Nr:

Query id	Subject id	identity %	alignment length	mismatches	gap openings	q. start	q. end	s. start	s. end	e-value	bit score
MS.gene019181.t1	XP_013459651.1	97.7	215	5	0	1	215	1	215	7.60E-119	436.4

Swissprot:

Query id	Subject id	identity %	alignment length	mismatches	gap openings	q. start	q. end	s. start	s. end	e-value	bit score
MS.gene019181.t1	O80852	60.7	214	84	0	1	214	1	214	3.6e-77	289.3

Trembl:

Query id	Subject id	identity %	alignment length	mismatches	gap openings	q. start	q. end	s. start	s. end	e-value	bit score
MS.gene019181.t1	A0A072UVM3	97.7	215	5	0	1	215	1	215	5.5e-119	436.4

TFs/TRs:

Gene ID	Type	Classification

Protein Kinases:

Gene ID	Type	Classification

Network:

Co-expression Network:

Gene1	Gene2	correlation coefficient	p_value	FDR

PPI:

Gene1	Gene2	Type
MS.gene20711	MS.gene019181	PPI
MS.gene008334	MS.gene019181	PPI
MS.gene008278	MS.gene019181	PPI
MS.gene019181	MS.gene48032	PPI
MS.gene019181	MS.gene69505	PPI
MS.gene019181	MS.gene017062	PPI
MS.gene019181	MS.gene07192	PPI
MS.gene008337	MS.gene019181	PPI
MS.gene019183	MS.gene019181	PPI
MS.gene47714	MS.gene019181	PPI
MS.gene019181	MS.gene048797	PPI
MS.gene019181	MS.gene22196	PPI
MS.gene017060	MS.gene019181	PPI
MS.gene22195	MS.gene019181	PPI
MS.gene019181	MS.gene061566	PPI
MS.gene019181	MS.gene049699	PPI
MS.gene048743	MS.gene019181	PPI
MS.gene019181	MS.gene22188	PPI
MS.gene000510	MS.gene019181	PPI
MS.gene019181	MS.gene83384	PPI
MS.gene019181	MS.gene72151	PPI
MS.gene030405	MS.gene019181	PPI
MS.gene005621	MS.gene019181	PPI
MS.gene019181	MS.gene48030	PPI
MS.gene019181	MS.gene049706	PPI
MS.gene019181	MS.gene05016	PPI
MS.gene019181	MS.gene03034	PPI
MS.gene019181	MS.gene048703	PPI
MS.gene04976	MS.gene019181	PPI
MS.gene019181	MS.gene47714	PPI
MS.gene038277	MS.gene019181	PPI
MS.gene019181	MS.gene69499	PPI

Query id	Subject id	identity %	alignment length	mismatches	gap openings	q. start	q. end	s. start	s. end	e-value	bit score
MS.gene019181.t1	MTR_3g450790	97.674	215	5	0	1	215	1	215	7.69e-156	430
MS.gene019181.t1	MTR_3g450930	78.140	215	47	0	1	215	1	215	2.96e-127	358
MS.gene019181.t1	MTR_5g090920	72.222	216	59	1	1	215	1	216	3.30e-112	320
MS.gene019181.t1	MTR_5g090910	69.444	216	65	1	1	215	1	216	5.44e-110	314
MS.gene019181.t1	MTR_3g064700	56.808	213	91	1	1	212	1	213	1.92e-86	254
MS.gene019181.t1	MTR_5g090910	69.737	152	45	1	65	215	8	159	7.95e-74	221
MS.gene019181.t1	MTR_1g088850	49.524	210	103	3	1	208	1	209	3.75e-71	216
MS.gene019181.t1	MTR_1g026140	48.165	218	107	3	3	214	5	222	5.16e-67	206
MS.gene019181.t1	MTR_1g088840	41.905	210	120	2	2	210	3	211	3.49e-55	175
MS.gene019181.t1	MTR_1g088825	41.905	210	120	2	2	210	3	211	3.49e-55	175
MS.gene019181.t1	MTR_1g088845	42.381	210	119	2	2	210	3	211	1.30e-52	169
MS.gene019181.t1	MTR_1g088840	42.683	164	93	1	47	210	2	164	3.02e-42	140
MS.gene019181.t1	MTR_1g088840	44.248	113	62	1	98	210	4	115	8.93e-26	97.1
MS.gene019181.t1	MTR_8g098420	30.409	171	115	3	1	167	1	171	4.27e-17	76.3
MS.gene019181.t1	MTR_8g098420	29.381	194	126	4	1	190	1	187	9.91e-17	76.6
MS.gene019181.t1	MTR_1g492670	46.970	66	34	1	145	210	2	66	7.93e-14	64.3
MS.gene019181.t1	MTR_4g134370	37.234	94	58	1	15	108	29	121	1.63e-12	64.7
MS.gene019181.t1	MTR_2g005570	26.111	180	106	5	39	208	42	204	2.32e-12	65.5
MS.gene019181.t1	MTR_2g005570	25.556	180	107	5	39	208	42	204	8.35e-12	63.9
MS.gene019181.t1	MTR_4g134380	29.560	159	95	5	15	166	29	177	1.74e-11	61.6
MS.gene019181.t1	MTR_8g098430	27.326	172	115	5	3	167	5	173	2.28e-11	61.6
MS.gene019181.t1	MTR_4g134380	32.979	94	62	1	15	108	29	121	5.39e-11	59.7

Query id	Subject id	identity %	alignment length	mismatches	gap openings	q. start	q. end	s. start	s. end	e-value	bit score
MS.gene019181.t1	AT2G30860	60.465	215	85	0	1	215	1	215	5.10e-99	286
MS.gene019181.t1	AT2G30870	59.070	215	88	0	1	215	1	215	3.57e-97	282
MS.gene019181.t1	AT3G03190	51.869	214	102	1	1	213	1	214	4.18e-77	231
MS.gene019181.t1	AT5G17220	48.341	211	108	1	1	210	1	211	9.32e-69	209
MS.gene019181.t1	AT3G62760	47.847	209	106	3	1	207	1	208	8.40e-68	207
MS.gene019181.t1	AT2G30860	59.740	154	62	0	1	154	1	154	1.02e-65	200
MS.gene019181.t1	AT1G02930	45.411	207	110	3	3	208	4	208	5.76e-56	177
MS.gene019181.t1	AT1G02930	45.411	207	110	3	3	208	4	208	5.76e-56	177
MS.gene019181.t1	AT1G02920	45.894	207	110	2	3	208	4	209	1.71e-54	173
MS.gene019181.t1	AT2G47730	42.857	210	117	3	5	212	54	262	6.08e-54	174
MS.gene019181.t1	AT2G47730	42.857	210	117	3	5	212	54	262	6.08e-54	174
MS.gene019181.t1	AT2G02930	44.286	210	112	3	3	208	4	212	6.98e-53	169
MS.gene019181.t1	AT4G02520	43.062	209	114	3	3	207	4	211	9.56e-53	169
MS.gene019181.t1	AT1G49860	41.872	203	115	2	16	215	19	221	7.40e-51	165
MS.gene019181.t1	AT1G02950	40.686	204	118	3	4	205	26	228	2.64e-47	156
MS.gene019181.t1	AT1G02950	40.686	204	118	3	4	205	26	228	2.64e-47	156
MS.gene019181.t1	AT1G02950	40.686	204	118	3	4	205	38	240	2.81e-47	156
MS.gene019181.t1	AT1G02950	40.686	204	118	3	4	205	28	230	2.86e-47	156
MS.gene019181.t1	AT1G02940	38.278	209	126	3	4	210	40	247	6.55e-46	153
MS.gene019181.t1	AT1G02940	38.278	209	126	3	4	210	40	247	6.55e-46	153
MS.gene019181.t1	AT1G02940	38.278	209	126	3	4	210	53	260	8.51e-46	153
MS.gene019181.t1	AT1G02940	38.278	209	126	3	4	210	65	272	8.63e-46	153
MS.gene019181.t1	AT1G02950	37.241	145	89	2	62	205	59	202	1.07e-26	102
MS.gene019181.t1	AT5G41240	28.000	200	138	3	1	194	1	200	6.33e-14	70.5
MS.gene019181.t1	AT5G41210	26.108	203	144	4	1	197	2	204	6.98e-13	65.9
MS.gene019181.t1	AT1G09640	26.816	179	121	4	39	214	40	211	9.89e-13	65.9
MS.gene019181.t1	AT1G09640	26.901	171	117	3	39	208	40	203	1.32e-12	66.2
MS.gene019181.t1	AT5G41220	27.000	200	140	3	1	194	1	200	6.52e-12	64.3
MS.gene019181.t1	AT1G57720	27.168	173	114	4	39	208	40	203	7.60e-12	63.9
MS.gene019181.t1	AT1G57720	27.168	173	114	4	39	208	40	203	7.60e-12	63.9

Find 56 sgRNAs with CRISPR-Local

Find 107 sgRNAs with CRISPR-GE

CRISPR-Local

CRISPR-Local
sgRNA_sequence	on_target_score	Position	Region
CACTCTCTTCAATCACTTTC+TGG	0.116870	3.3:+37252232	None:intergenic
TGTTCTGTTTGCACCGTTAA+AGG	0.197508	3.3:-37252268	MS.gene019181:CDS
TCAAACTGGGAGAGGAAATT+TGG	0.210954	3.3:-37252085	MS.gene019181:CDS
TCTTGCATTTGGTCACTATT+TGG	0.246792	3.3:-37252112	MS.gene019181:CDS
CAGCCTATGGTTCTCCAAAA+AGG	0.287014	3.3:-37253448	MS.gene019181:CDS
CACTATTTGGTGAATCAAAC+TGG	0.321868	3.3:-37252099	MS.gene019181:CDS
GATCTTAGCCATCTTGCATT+TGG	0.333958	3.3:-37252123	MS.gene019181:CDS
AACATGGTTGTGAAAGTTTA+CGG	0.363412	3.3:-37253473	MS.gene019181:CDS
GATGGTGATTATACCCTCTA+TGG	0.366109	3.3:-37253215	MS.gene019181:intron
AACCTGCAGTTTGAGAAAAT+CGG	0.405623	3.3:+37253346	None:intergenic
AACCAAGGAACCGATTTGTT+AGG	0.406691	3.3:-37252381	MS.gene019181:CDS
TCACCGGTTTCACCCTTTAA+CGG	0.407596	3.3:+37252255	None:intergenic
TACTGTCTTTCCTAACAAAT+CGG	0.410470	3.3:+37252371	None:intergenic
TTCCTAACAAATCGGTTCCT+TGG	0.418961	3.3:+37252379	None:intergenic
GTTCTGTTTGCACCGTTAAA+GGG	0.425408	3.3:-37252267	MS.gene019181:CDS
TTCAATCACTTTCTGGTCAC+CGG	0.431772	3.3:+37252239	None:intergenic
ACCTGCAGTTTGAGAAAATC+GGG	0.447227	3.3:+37253347	None:intergenic
AGGAAAGACAGTAGAAGAAA+GGG	0.454362	3.3:-37252361	MS.gene019181:CDS
ATGACCAAGCTGTAGATTGC+TGG	0.457280	3.3:+37252294	None:intergenic
GATAAGGTGGCTAACCATAG+AGG	0.460293	3.3:+37253201	None:intergenic
TGTTGATATTGATCTCTTCA+AGG	0.461501	3.3:-37253384	MS.gene019181:CDS
TAATCACCATCTTGAATAAG+AGG	0.461529	3.3:+37253227	None:intergenic
GCACCGTTAAAGGGTGAAAC+CGG	0.464712	3.3:-37252258	MS.gene019181:CDS
TAGGAAAGACAGTAGAAGAA+AGG	0.466401	3.3:-37252362	MS.gene019181:CDS
GAAATCACCAGCCAAGTACT+TGG	0.494773	3.3:+37252158	None:intergenic
ATATTAGTAGCAGGCCATCT+TGG	0.502723	3.3:-37252026	MS.gene019181:CDS
TATATAAATACCCTGTGTAA+TGG	0.503081	3.3:-37251987	None:intergenic
AAAGTTTACGGACCAGCCTA+TGG	0.503832	3.3:-37253461	MS.gene019181:CDS
GAGGAAATTTGGTTAGAGAG+AGG	0.505432	3.3:-37252074	MS.gene019181:CDS
TCAAGAACCTTCTTCCAAGA+TGG	0.510216	3.3:+37252012	None:intergenic
GCTCTCAAAGACCAAGTACT+TGG	0.516432	3.3:-37252169	MS.gene019181:CDS
GAGGTTCCTCTTATTCAAGA+TGG	0.522461	3.3:-37253233	MS.gene019181:CDS
TAGCAGGCCATCTTGGAAGA+AGG	0.522731	3.3:-37252019	MS.gene019181:CDS
TCAAAGACCAAGTACTTGGC+TGG	0.541866	3.3:-37252165	MS.gene019181:CDS
GTTGATATTGATCTCTTCAA+GGG	0.544872	3.3:-37253383	MS.gene019181:CDS
ATAAGAGGAACCTCTCCAAA+AGG	0.553491	3.3:+37253242	None:intergenic
TTGGTGAATCAAACTGGGAG+AGG	0.560271	3.3:-37252093	MS.gene019181:CDS
CACAAACAAAACCATTACAC+AGG	0.565632	3.3:+37251976	None:intergenic
TGTTGGATATTTACGAGGAG+AGG	0.570899	3.3:-37252191	MS.gene019181:CDS
GGTGGGATGATATTAGTAGC+AGG	0.571858	3.3:-37252035	MS.gene019181:CDS
AGTAGAAGAAAGGGGTCTTG+TGG	0.572723	3.3:-37252352	MS.gene019181:CDS
TGAAAAGCTCAAGAAAGTGT+TGG	0.575500	3.3:-37252208	MS.gene019181:CDS
TCACCCAGCAATCTACAGCT+TGG	0.583361	3.3:-37252298	MS.gene019181:CDS
AATAGTGACCAAATGCAAGA+TGG	0.590599	3.3:+37252115	None:intergenic
ATAAGGTGGCTAACCATAGA+GGG	0.603249	3.3:+37253202	None:intergenic
GAAACATGTGAGTGCATGGT+GGG	0.618318	3.3:-37252052	MS.gene019181:CDS
AAAGGGGTCTTGTGGAACAA+TGG	0.621131	3.3:-37252344	MS.gene019181:CDS
TGTGGAACAATGGCTTGAAG+TGG	0.622912	3.3:-37252334	MS.gene019181:CDS
TGACCAAGCTGTAGATTGCT+GGG	0.623969	3.3:+37252295	None:intergenic
AGAGGAAACATGTGAGTGCA+TGG	0.644423	3.3:-37252056	MS.gene019181:CDS
GGAAAGACAGTAGAAGAAAG+GGG	0.652059	3.3:-37252360	MS.gene019181:CDS
ACTATTTGGTGAATCAAACT+GGG	0.660675	3.3:-37252098	MS.gene019181:CDS
GCAGAAAAGTACAAGAACCA+AGG	0.682353	3.3:-37252396	MS.gene019181:CDS
ACAAACAAAACCATTACACA+GGG	0.686281	3.3:+37251977	None:intergenic
GAAAGTGTTGGATATTTACG+AGG	0.697226	3.3:-37252196	MS.gene019181:CDS
GGAAACATGTGAGTGCATGG+TGG	0.712862	3.3:-37252053	MS.gene019181:CDS

CRISPR-GE

badsite warning	sgRNA_sequence	Strand	Position	Region	GC_content
!!!	AATTAAATAAGCAGTAATTT+TGG	+	chr3.3:37252912-37252931	None:intergenic	15.0%
!!!	ATCCAAAGTTTAAAATATAA+GGG	+	chr3.3:37252369-37252388	None:intergenic	15.0%
!!	AAAATTGCAGAAAATAGTAA+AGG	+	chr3.3:37252285-37252304	None:intergenic	20.0%
!!	AAATTGCAGAAAATAGTAAA+GGG	+	chr3.3:37252284-37252303	None:intergenic	20.0%
!!!	AAAATAAACAGCAATTTGTT+CGG	-	chr3.3:37252666-37252685	MS.gene019181:intron	20.0%
!!!	ATATTTTAAACTTTGGATCA+GGG	-	chr3.3:37252371-37252390	MS.gene019181:CDS	20.0%
!!!	ATCCCTTATATTTTAAACTT+TGG	-	chr3.3:37252364-37252383	MS.gene019181:CDS	20.0%
!!!	GATCCAAAGTTTAAAATATA+AGG	+	chr3.3:37252370-37252389	None:intergenic	20.0%
!!!	TATATTTTAAACTTTGGATC+AGG	-	chr3.3:37252370-37252389	MS.gene019181:CDS	20.0%
!	AGATAATGATTGTTTAAGCT+AGG	+	chr3.3:37252549-37252568	None:intergenic	25.0%
!	AGCTTAAACAATCATTATCT+AGG	-	chr3.3:37252549-37252568	MS.gene019181:intron	25.0%
!!	GAATTTTCTCAATACATTCA+GGG	-	chr3.3:37252862-37252881	MS.gene019181:intron	25.0%
!!	TGAATTTTCTCAATACATTC+AGG	-	chr3.3:37252861-37252880	MS.gene019181:intron	25.0%
!!!	AAACGAATTTTTCAGAATCT+CGG	-	chr3.3:37253023-37253042	MS.gene019181:intron	25.0%
!!!	TGCAATTTTTTTGTTCTATG+TGG	-	chr3.3:37252296-37252315	MS.gene019181:CDS	25.0%
	AAAACACATGAATCAGGATA+AGG	+	chr3.3:37252457-37252476	None:intergenic	30.0%
	AAAATAGTAAAGGGATAAGG+TGG	+	chr3.3:37252275-37252294	None:intergenic	30.0%
	AAACACATGAATCAGGATAA+GGG	+	chr3.3:37252456-37252475	None:intergenic	30.0%
	AACACATTTCAAGCATAATC+AGG	+	chr3.3:37252743-37252762	None:intergenic	30.0%
	ACTATAGTAACACAGCTTTA+GGG	-	chr3.3:37252885-37252904	MS.gene019181:intron	30.0%
	ATGTCTACTACTTGTCAATT+TGG	-	chr3.3:37252798-37252817	MS.gene019181:intron	30.0%
	CAGAAAATAGTAAAGGGATA+AGG	+	chr3.3:37252278-37252297	None:intergenic	30.0%
	GCTGAAAATATAAGAGACAT+AGG	+	chr3.3:37252199-37252218	None:intergenic	30.0%
	GTCATTTGTATCTGTTAATG+TGG	-	chr3.3:37252969-37252988	MS.gene019181:intron	30.0%
	GTTGATATTGATCTCTTCAA+GGG	-	chr3.3:37252077-37252096	MS.gene019181:CDS	30.0%
	TAATCACCATCTTGAATAAG+AGG	+	chr3.3:37252236-37252255	None:intergenic	30.0%
	TACTGTCTTTCCTAACAAAT+CGG	+	chr3.3:37253092-37253111	None:intergenic	30.0%
	TCTAGGCTTAATTTATCTCT+CGG	-	chr3.3:37252566-37252585	MS.gene019181:intron	30.0%
	TGGTTAATCATCTTCACTTA+AGG	-	chr3.3:37252492-37252511	MS.gene019181:intron	30.0%
	TGTTGATATTGATCTCTTCA+AGG	-	chr3.3:37252076-37252095	MS.gene019181:CDS	30.0%
!	ACAAGTAGTAGACATTTTCA+AGG	+	chr3.3:37252793-37252812	None:intergenic	30.0%
!	ACTATTTGGTGAATCAAACT+GGG	-	chr3.3:37253362-37253381	MS.gene019181:CDS	30.0%
!	CTCTTATATTTTCAGCCTTT+TGG	-	chr3.3:37252203-37252222	MS.gene019181:CDS	30.0%
!!	AACGAATTTTTCAGAATCTC+GGG	-	chr3.3:37253024-37253043	MS.gene019181:intron	30.0%
!!!	CTGATTCATGTGTTTTTAGA+GGG	-	chr3.3:37252461-37252480	MS.gene019181:intron	30.0%
	AACCTGCAGTTTGAGAAAAT+CGG	+	chr3.3:37252117-37252136	None:intergenic	35.0%
	AATAGTGACCAAATGCAAGA+TGG	+	chr3.3:37253348-37253367	None:intergenic	35.0%
	AGGAAAGACAGTAGAAGAAA+GGG	-	chr3.3:37253099-37253118	MS.gene019181:intron	35.0%
	ATAAGGGATTAACACAGTGA+GGG	+	chr3.3:37252353-37252372	None:intergenic	35.0%
	GACTATAGTAACACAGCTTT+AGG	-	chr3.3:37252884-37252903	MS.gene019181:intron	35.0%
	TAGGAAAGACAGTAGAAGAA+AGG	-	chr3.3:37253098-37253117	MS.gene019181:intron	35.0%
	TATAAGGGATTAACACAGTG+AGG	+	chr3.3:37252354-37252373	None:intergenic	35.0%
	TCTTGCATTTGGTCACTATT+TGG	-	chr3.3:37253348-37253367	MS.gene019181:intron	35.0%
!	CACTATTTGGTGAATCAAAC+TGG	-	chr3.3:37253361-37253380	MS.gene019181:CDS	35.0%
!	CCTCTAAAAACACATGAATC+AGG	+	chr3.3:37252463-37252482	None:intergenic	35.0%
!	GGGTGTTACATTTAATTGTG+AGG	-	chr3.3:37252391-37252410	MS.gene019181:CDS	35.0%
!	TGAAAAGCTCAAGAAAGTGT+TGG	-	chr3.3:37253252-37253271	MS.gene019181:intron	35.0%
!!	ATATTTTCAGCCTTTTGGAG+AGG	-	chr3.3:37252208-37252227	MS.gene019181:CDS	35.0%
!!	GAAAGTGTTGGATATTTACG+AGG	-	chr3.3:37253264-37253283	MS.gene019181:intron	35.0%
!!	GTTGGTATGTCTTTTTGAGA+AGG	-	chr3.3:37252037-37252056	MS.gene019181:CDS	35.0%
!!	GTTTTTAGAGGGTAATCAAG+TGG	-	chr3.3:37252472-37252491	MS.gene019181:intron	35.0%
!!!	CCTGATTCATGTGTTTTTAG+AGG	-	chr3.3:37252460-37252479	MS.gene019181:intron	35.0%
	ACCTGCAGTTTGAGAAAATC+GGG	+	chr3.3:37252116-37252135	None:intergenic	40.0%
	AGCCTATGGTTCTCCAAAAA+GGG	-	chr3.3:37252013-37252032	MS.gene019181:CDS	40.0%
	ATAAGAGGAACCTCTCCAAA+AGG	+	chr3.3:37252221-37252240	None:intergenic	40.0%
	ATAAGGTGGCTAACCATAGA+GGG	+	chr3.3:37252261-37252280	None:intergenic	40.0%
	ATATTAGTAGCAGGCCATCT+TGG	-	chr3.3:37253434-37253453	MS.gene019181:CDS	40.0%
	CACTCTCTTCAATCACTTTC+TGG	+	chr3.3:37253231-37253250	None:intergenic	40.0%
	GAGGAAATTTGGTTAGAGAG+AGG	-	chr3.3:37253386-37253405	MS.gene019181:CDS	40.0%
	GAGGTTCCTCTTATTCAAGA+TGG	-	chr3.3:37252227-37252246	MS.gene019181:CDS	40.0%
	GATCTTAGCCATCTTGCATT+TGG	-	chr3.3:37253337-37253356	MS.gene019181:intron	40.0%
	GATGGTGATTATACCCTCTA+TGG	-	chr3.3:37252245-37252264	MS.gene019181:CDS	40.0%
	GGAAAGACAGTAGAAGAAAG+GGG	-	chr3.3:37253100-37253119	MS.gene019181:intron	40.0%
	GGCTGAACTTAGAATTACCA+AGG	-	chr3.3:37252587-37252606	MS.gene019181:intron	40.0%
	GTTCTGTTTGCACCGTTAAA+GGG	-	chr3.3:37253193-37253212	MS.gene019181:intron	40.0%
	TCAAACTGGGAGAGGAAATT+TGG	-	chr3.3:37253375-37253394	MS.gene019181:CDS	40.0%
	TCAAGAACCTTCTTCCAAGA+TGG	+	chr3.3:37253451-37253470	None:intergenic	40.0%
	TGTTCTGTTTGCACCGTTAA+AGG	-	chr3.3:37253192-37253211	MS.gene019181:intron	40.0%
	TGTTGGATATTTACGAGGAG+AGG	-	chr3.3:37253269-37253288	MS.gene019181:intron	40.0%
!	AGACATACCAACACCCTTTT+TGG	+	chr3.3:37252029-37252048	None:intergenic	40.0%
!	GCAGAAAAGTACAAGAACCA+AGG	-	chr3.3:37253064-37253083	MS.gene019181:intron	40.0%
!	TTCAATCACTTTCTGGTCAC+CGG	+	chr3.3:37253224-37253243	None:intergenic	40.0%
!	TTCCTAACAAATCGGTTCCT+TGG	+	chr3.3:37253084-37253103	None:intergenic	40.0%
!!	AACCAAGGAACCGATTTGTT+AGG	-	chr3.3:37253079-37253098	MS.gene019181:intron	40.0%
	AAAGTTTACGGACCAGCCTA+TGG	-	chr3.3:37251999-37252018	MS.gene019181:CDS	45.0%
	AGAGGAAACATGTGAGTGCA+TGG	-	chr3.3:37253404-37253423	MS.gene019181:CDS	45.0%
	AGTAGAAGAAAGGGGTCTTG+TGG	-	chr3.3:37253108-37253127	MS.gene019181:intron	45.0%
	ATGACCAAGCTGTAGATTGC+TGG	+	chr3.3:37253169-37253188	None:intergenic	45.0%
	CAGCCTATGGTTCTCCAAAA+AGG	-	chr3.3:37252012-37252031	MS.gene019181:CDS	45.0%
	GAAACATGTGAGTGCATGGT+GGG	-	chr3.3:37253408-37253427	MS.gene019181:CDS	45.0%
	GAAATCACCAGCCAAGTACT+TGG	+	chr3.3:37253305-37253324	None:intergenic	45.0%
	GATAAGGTGGCTAACCATAG+AGG	+	chr3.3:37252262-37252281	None:intergenic	45.0%
	GCTCTCAAAGACCAAGTACT+TGG	-	chr3.3:37253291-37253310	MS.gene019181:intron	45.0%
	GGTGGGATGATATTAGTAGC+AGG	-	chr3.3:37253425-37253444	MS.gene019181:CDS	45.0%
	TCAAAGACCAAGTACTTGGC+TGG	-	chr3.3:37253295-37253314	MS.gene019181:intron	45.0%
	TGACCAAGCTGTAGATTGCT+GGG	+	chr3.3:37253168-37253187	None:intergenic	45.0%
	TGTGGAACAATGGCTTGAAG+TGG	-	chr3.3:37253126-37253145	MS.gene019181:intron	45.0%
	TTATAACCCTCTCGTTCCCA+TGG	+	chr3.3:37252620-37252639	None:intergenic	45.0%
	TTGGTGAATCAAACTGGGAG+AGG	-	chr3.3:37253367-37253386	MS.gene019181:CDS	45.0%
!	AAAGGGGTCTTGTGGAACAA+TGG	-	chr3.3:37253116-37253135	MS.gene019181:intron	45.0%
!	ACCCGATTTTCTCAAACTGC+AGG	-	chr3.3:37252112-37252131	MS.gene019181:CDS	45.0%
!	TGGTTCTCCAAAAAGGGTGT+TGG	-	chr3.3:37252019-37252038	MS.gene019181:CDS	45.0%
!!	CACCCTTTTTGGAGAACCAT+AGG	+	chr3.3:37252018-37252037	None:intergenic	45.0%
!!	CTTTTTGGAGAACCATAGGC+TGG	+	chr3.3:37252014-37252033	None:intergenic	45.0%
!!	TCACCGGTTTCACCCTTTAA+CGG	+	chr3.3:37253208-37253227	None:intergenic	45.0%
	AGGGAAGCAAAGATGCATGC+AGG	+	chr3.3:37252437-37252456	None:intergenic	50.0%
	GCACCGTTAAAGGGTGAAAC+CGG	-	chr3.3:37253202-37253221	MS.gene019181:intron	50.0%
	GGAAACATGTGAGTGCATGG+TGG	-	chr3.3:37253407-37253426	MS.gene019181:CDS	50.0%
	GGGAAGCAAAGATGCATGCA+GGG	+	chr3.3:37252436-37252455	None:intergenic	50.0%
	TAGCAGGCCATCTTGGAAGA+AGG	-	chr3.3:37253441-37253460	MS.gene019181:CDS	50.0%
	TCACCCAGCAATCTACAGCT+TGG	-	chr3.3:37253162-37253181	MS.gene019181:intron	50.0%
!	ATTACCAAGGCCGCTTTCCA+TGG	-	chr3.3:37252600-37252619	MS.gene019181:intron	50.0%
!	TTACCAAGGCCGCTTTCCAT+GGG	-	chr3.3:37252601-37252620	MS.gene019181:intron	50.0%
	CCTCTCGTTCCCATGGAAAG+CGG	+	chr3.3:37252613-37252632	None:intergenic	55.0%
	CGCTTTCCATGGGAACGAGA+GGG	-	chr3.3:37252611-37252630	MS.gene019181:intron	55.0%
	CCGCTTTCCATGGGAACGAG+AGG	-	chr3.3:37252610-37252629	MS.gene019181:intron	60.0%
	GTTCCCATGGAAAGCGGCCT+TGG	+	chr3.3:37252607-37252626	None:intergenic	60.0%

Chromosome	Type	Strat	End	Strand	Name
chr3.3	gene	37251990	37253492	37251990	ID=MS.gene019181
chr3.3	mRNA	37251990	37253492	37251990	ID=MS.gene019181.t1;Parent=MS.gene019181
chr3.3	exon	37253349	37253492	37253349	ID=MS.gene019181.t1.exon1;Parent=MS.gene019181.t1
chr3.3	CDS	37253349	37253492	37253349	ID=cds.MS.gene019181.t1;Parent=MS.gene019181.t1
chr3.3	exon	37253216	37253264	37253216	ID=MS.gene019181.t1.exon2;Parent=MS.gene019181.t1
chr3.3	CDS	37253216	37253264	37253216	ID=cds.MS.gene019181.t1;Parent=MS.gene019181.t1
chr3.3	exon	37251990	37252444	37251990	ID=MS.gene019181.t1.exon3;Parent=MS.gene019181.t1
chr3.3	CDS	37251990	37252444	37251990	ID=cds.MS.gene019181.t1;Parent=MS.gene019181.t1

Gene Sequence

>MS.gene019181

ATGGTTGTGAAAGTTTACGGACCAGCCTATGGTTCTCCAAAAAGGGTGTTGGTATGTCTTTTTGAGAAGGAAGTTGAGTTTGAAGCTGTTGATATTGATCTCTTCAAGGGAGAGCATAAACAACCCGATTTTCTCAAACTGCAGGTTCAATTTTTCTTCAATTTTATTCAACTTAATCAATTATTTATTTTTCATGTGTAATTTTACCTATGTCTCTTATATTTTCAGCCTTTTGGAGAGGTTCCTCTTATTCAAGATGGTGATTATACCCTCTATGGTTAGCCACCTTATCCCTTTACTATTTTCTGCAATTTTTTTGTTCTATGTGGTTAATGATTGATGATTTACAGATTTTAATTTCCCTCACTGTGTTAATCCCTTATATTTTAAACTTTGGATCAGGGTGTTACATTTAATTGTGAGGTTAAAACTGTTTATATTTTCCCTGCATGCATCTTTGCTTCCCTTATCCTGATTCATGTGTTTTTAGAGGGTAATCAAGTGGTTAATCATCTTCACTTAAGGTCAAATTGTTCTAGAGAAATCAAGTTTGAATCCTAGCTTAAACAATCATTATCTAGGCTTAATTTATCTCTCGGCTGAACTTAGAATTACCAAGGCCGCTTTCCATGGGAACGAGAGGGTTATAAATTACATATCACTCGATTTAATAGATAAAATAAACAGCAATTTGTTCGGTTCTGAGTGTATAAAAATTTGTCTAACATTTTCGAATCTGTCTTTTGATAGCCTGATTATGCTTGAAATGTGTTTTCTCTTAATTAACTGATTAATTTTGTCCTTGAAAATGTCTACTACTTGTCAATTTGGTCGATAAATTACTAACATAAGACACTTTCAAAAAAGCTTATGAATTTTCTCAATACATTCAGGGACTATAGTAACACAGCTTTAGGGACCAAAATTACTGCTTATTTAATTTGTCTTTAAAAAGTGATTTTGATCTCAAACATATATTGTCATTTGTATCTGTTAATGTGGAATAATCTATTCATACTGATAGACTAATTTTAAACGAATTTTTCAGAATCTCGGGCAATAATCAGATACTATGCAGAAAAGTACAAGAACCAAGGAACCGATTTGTTAGGAAAGACAGTAGAAGAAAGGGGTCTTGTGGAACAATGGCTTGAAGTGGAAGCACATAACTTTCACCCAGCAATCTACAGCTTGGTCATCAATGTTCTGTTTGCACCGTTAAAGGGTGAAACCGGTGACCAGAAAGTGATTGAAGAGAGTGATGAAAAGCTCAAGAAAGTGTTGGATATTTACGAGGAGAGGCTCTCAAAGACCAAGTACTTGGCTGGTGATTTCTTTAGTCTTGCTGATCTTAGCCATCTTGCATTTGGTCACTATTTGGTGAATCAAACTGGGAGAGGAAATTTGGTTAGAGAGAGGAAACATGTGAGTGCATGGTGGGATGATATTAGTAGCAGGCCATCTTGGAAGAAGGTTCTTGAACTATATAAATACCCTGTGTAA

Protein sequence

>MS.gene019181.t1

MVVKVYGPAYGSPKRVLVCLFEKEVEFEAVDIDLFKGEHKQPDFLKLQPFGEVPLIQDGDYTLYESRAIIRYYAEKYKNQGTDLLGKTVEERGLVEQWLEVEAHNFHPAIYSLVINVLFAPLKGETGDQKVIEESDEKLKKVLDIYEERLSKTKYLAGDFFSLADLSHLAFGHYLVNQTGRGNLVRERKHVSAWWDDISSRPSWKKVLELYKYPV