Alfalfa Gene Editing Database
Alfalfa Gene Editing Database
Nr:
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene22889.t1 | XP_003626382.1 | 93.9 | 462 | 27 | 1 | 1 | 461 | 1 | 462 | 5.70E-257 | 896.3 |
Swissprot:
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene22889.t1 | Q8GT20 | 61.3 | 442 | 164 | 4 | 4 | 443 | 6 | 442 | 1.9e-155 | 550.4 |
Trembl:
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene22889.t1 | G7L0S9 | 93.9 | 462 | 27 | 1 | 1 | 461 | 1 | 462 | 4.1e-257 | 896.3 |
TFs/TRs:
| Gene ID | Type | Classification |
|---|
Protein Kinases:
| Gene ID | Type | Classification |
|---|
Network:
Co-expression Network:
| Gene1 | Gene2 | correlation coefficient | p_value | FDR |
|---|---|---|---|---|
| MS.gene050494 | MS.gene22889 | 0.915702 | 4.30E-85 | -1.69E-46 |
| MS.gene050495 | MS.gene22889 | 0.882101 | 1.38E-70 | -1.69E-46 |
PPI:
| Gene1 | Gene2 | Type |
|---|---|---|
| MS.gene038905 | MS.gene22889 | PPI |
| MS.gene22889 | MS.gene38359 | PPI |
| MS.gene95242 | MS.gene22889 | PPI |
| MS.gene32936 | MS.gene22889 | PPI |
| MS.gene22889 | MS.gene38699 | PPI |
| MS.gene069436 | MS.gene22889 | PPI |
| MS.gene32938 | MS.gene22889 | PPI |
| MS.gene38362 | MS.gene22889 | PPI |
| MS.gene22889 | MS.gene012959 | PPI |
| MS.gene38703 | MS.gene22889 | PPI |
| MS.gene38363 | MS.gene22889 | PPI |
| MS.gene22889 | MS.gene042317 | PPI |
| MS.gene039597 | MS.gene22889 | PPI |
| MS.gene32934 | MS.gene22889 | PPI |
| MS.gene22889 | MS.gene38702 | PPI |
| MS.gene66891 | MS.gene22889 | PPI |
| MS.gene38704 | MS.gene22889 | PPI |
| MS.gene069321 | MS.gene22889 | PPI |
| MS.gene22889 | MS.gene012961 | PPI |
| MS.gene38361 | MS.gene22889 | PPI |
| MS.gene38706 | MS.gene22889 | PPI |
| MS.gene046246 | MS.gene22889 | PPI |
| MS.gene38700 | MS.gene22889 | PPI |
| MS.gene012960 | MS.gene22889 | PPI |
| MS.gene38365 | MS.gene22889 | PPI |
| MS.gene012965 | MS.gene22889 | PPI |
| MS.gene012957 | MS.gene22889 | PPI |
| MS.gene22889 | MS.gene32933 | PPI |
| MS.gene38701 | MS.gene22889 | PPI |
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene22889.t1 | MTR_7g114470 | 93.939 | 462 | 27 | 1 | 1 | 461 | 1 | 462 | 0.0 | 911 |
| MS.gene22889.t1 | MTR_5g076700 | 86.928 | 459 | 60 | 0 | 3 | 461 | 2 | 460 | 0.0 | 852 |
| MS.gene22889.t1 | MTR_7g114560 | 77.996 | 459 | 100 | 1 | 3 | 461 | 2 | 459 | 0.0 | 765 |
| MS.gene22889.t1 | MTR_7g114550 | 76.790 | 461 | 105 | 2 | 1 | 461 | 1 | 459 | 0.0 | 756 |
| MS.gene22889.t1 | MTR_7g114520 | 75.541 | 462 | 112 | 1 | 1 | 461 | 1 | 462 | 0.0 | 740 |
| MS.gene22889.t1 | MTR_7g114490 | 76.443 | 433 | 101 | 1 | 3 | 435 | 2 | 433 | 0.0 | 712 |
| MS.gene22889.t1 | MTR_1g040195 | 57.734 | 459 | 163 | 6 | 7 | 461 | 5 | 436 | 0.0 | 531 |
| MS.gene22889.t1 | MTR_1g040215 | 54.113 | 462 | 200 | 8 | 7 | 461 | 5 | 461 | 2.58e-178 | 507 |
| MS.gene22889.t1 | MTR_7g114420 | 81.017 | 295 | 29 | 1 | 167 | 461 | 1 | 268 | 4.30e-178 | 499 |
| MS.gene22889.t1 | MTR_1g040175 | 54.466 | 459 | 200 | 6 | 7 | 461 | 5 | 458 | 1.42e-177 | 505 |
| MS.gene22889.t1 | MTR_1g081660 | 56.858 | 452 | 180 | 7 | 3 | 447 | 9 | 452 | 7.55e-176 | 500 |
| MS.gene22889.t1 | MTR_7g114510 | 70.701 | 314 | 92 | 0 | 148 | 461 | 7 | 320 | 3.78e-166 | 471 |
| MS.gene22889.t1 | MTR_1g040320 | 52.203 | 454 | 173 | 7 | 7 | 456 | 5 | 418 | 1.09e-162 | 466 |
| MS.gene22889.t1 | MTR_1g040315 | 51.310 | 458 | 175 | 7 | 7 | 461 | 5 | 417 | 8.93e-154 | 443 |
| MS.gene22889.t1 | MTR_0042s0190 | 51.916 | 287 | 132 | 5 | 167 | 450 | 1 | 284 | 2.95e-97 | 295 |
| MS.gene22889.t1 | MTR_0502s0010 | 55.328 | 244 | 101 | 4 | 102 | 342 | 1 | 239 | 4.42e-85 | 261 |
| MS.gene22889.t1 | MTR_7g114500 | 79.470 | 151 | 31 | 0 | 3 | 153 | 2 | 152 | 2.92e-83 | 253 |
| MS.gene22889.t1 | MTR_8g096530 | 35.476 | 389 | 237 | 8 | 9 | 392 | 5 | 384 | 2.49e-80 | 256 |
| MS.gene22889.t1 | MTR_3g098980 | 33.178 | 428 | 270 | 8 | 11 | 435 | 14 | 428 | 5.84e-79 | 252 |
| MS.gene22889.t1 | MTR_7g027175 | 34.794 | 388 | 239 | 8 | 14 | 396 | 19 | 397 | 8.33e-76 | 244 |
| MS.gene22889.t1 | MTR_0042s0190 | 52.727 | 220 | 100 | 4 | 234 | 450 | 1 | 219 | 8.08e-74 | 232 |
| MS.gene22889.t1 | MTR_3g051790 | 72.483 | 149 | 41 | 0 | 1 | 149 | 3 | 151 | 2.92e-73 | 229 |
| MS.gene22889.t1 | MTR_0042s0230 | 64.336 | 143 | 51 | 0 | 7 | 149 | 5 | 147 | 1.42e-64 | 205 |
| MS.gene22889.t1 | MTR_1g053315 | 30.805 | 435 | 284 | 11 | 19 | 439 | 26 | 457 | 1.48e-59 | 202 |
| MS.gene22889.t1 | MTR_8g039950 | 63.780 | 127 | 46 | 0 | 4 | 130 | 2 | 128 | 3.49e-57 | 185 |
| MS.gene22889.t1 | MTR_3g112180 | 31.888 | 392 | 241 | 11 | 21 | 400 | 22 | 399 | 1.89e-56 | 194 |
| MS.gene22889.t1 | MTR_2g105330 | 29.241 | 448 | 289 | 14 | 7 | 442 | 1 | 432 | 9.58e-55 | 189 |
| MS.gene22889.t1 | MTR_2g064495 | 29.018 | 448 | 290 | 14 | 7 | 442 | 1 | 432 | 1.56e-53 | 185 |
| MS.gene22889.t1 | MTR_4g055170 | 30.493 | 446 | 274 | 16 | 18 | 439 | 19 | 452 | 4.28e-52 | 182 |
| MS.gene22889.t1 | MTR_4g007540 | 29.117 | 419 | 259 | 14 | 43 | 442 | 34 | 433 | 2.37e-50 | 177 |
| MS.gene22889.t1 | MTR_8g075610 | 27.970 | 404 | 266 | 11 | 46 | 439 | 28 | 416 | 1.24e-45 | 164 |
| MS.gene22889.t1 | MTR_3g071320 | 29.750 | 400 | 261 | 10 | 10 | 396 | 4 | 396 | 1.48e-45 | 164 |
| MS.gene22889.t1 | MTR_2g015430 | 31.778 | 343 | 221 | 7 | 56 | 391 | 48 | 384 | 8.24e-44 | 160 |
| MS.gene22889.t1 | MTR_7g110610 | 28.186 | 408 | 213 | 11 | 7 | 400 | 1 | 342 | 1.22e-41 | 152 |
| MS.gene22889.t1 | MTR_3g035000 | 40.496 | 242 | 108 | 8 | 201 | 434 | 43 | 256 | 7.83e-41 | 148 |
| MS.gene22889.t1 | MTR_7g085930 | 27.952 | 415 | 253 | 13 | 18 | 394 | 13 | 419 | 1.03e-38 | 146 |
| MS.gene22889.t1 | MTR_7g085990 | 28.434 | 415 | 253 | 15 | 17 | 394 | 8 | 415 | 1.36e-38 | 146 |
| MS.gene22889.t1 | MTR_7g084940 | 27.020 | 396 | 273 | 10 | 4 | 392 | 8 | 394 | 2.37e-38 | 145 |
| MS.gene22889.t1 | MTR_4g127650 | 27.938 | 451 | 279 | 14 | 19 | 439 | 18 | 452 | 3.67e-38 | 144 |
| MS.gene22889.t1 | MTR_7g084910 | 27.918 | 437 | 275 | 15 | 5 | 429 | 9 | 417 | 9.10e-38 | 143 |
| MS.gene22889.t1 | MTR_3g026950 | 25.747 | 435 | 258 | 12 | 19 | 415 | 10 | 417 | 4.09e-37 | 141 |
| MS.gene22889.t1 | MTR_3g465930 | 27.342 | 395 | 260 | 12 | 18 | 391 | 17 | 405 | 5.04e-37 | 141 |
| MS.gene22889.t1 | MTR_4g097090 | 27.294 | 436 | 267 | 14 | 37 | 439 | 34 | 452 | 2.88e-36 | 139 |
| MS.gene22889.t1 | MTR_7g086000 | 25.000 | 468 | 289 | 18 | 19 | 443 | 12 | 460 | 2.47e-34 | 134 |
| MS.gene22889.t1 | MTR_3g465990 | 27.342 | 395 | 256 | 12 | 18 | 391 | 17 | 401 | 3.96e-34 | 133 |
| MS.gene22889.t1 | MTR_3g465980 | 27.848 | 395 | 254 | 12 | 18 | 391 | 17 | 401 | 3.43e-33 | 130 |
| MS.gene22889.t1 | MTR_6g053810 | 27.723 | 404 | 249 | 15 | 65 | 439 | 70 | 459 | 8.25e-33 | 130 |
| MS.gene22889.t1 | MTR_3g049150 | 25.310 | 403 | 265 | 11 | 19 | 394 | 10 | 403 | 1.05e-32 | 129 |
| MS.gene22889.t1 | MTR_3g465910 | 26.683 | 401 | 270 | 12 | 9 | 391 | 8 | 402 | 1.69e-32 | 130 |
| MS.gene22889.t1 | MTR_3g465880 | 27.983 | 461 | 277 | 18 | 18 | 439 | 17 | 461 | 1.97e-30 | 123 |
| MS.gene22889.t1 | MTR_5g090810 | 26.128 | 421 | 261 | 14 | 9 | 393 | 8 | 414 | 2.65e-30 | 122 |
| MS.gene22889.t1 | MTR_5g090830 | 26.128 | 421 | 261 | 14 | 9 | 393 | 8 | 414 | 2.57e-29 | 120 |
| MS.gene22889.t1 | MTR_3g051820 | 66.304 | 92 | 29 | 2 | 371 | 461 | 1 | 91 | 5.07e-29 | 109 |
| MS.gene22889.t1 | MTR_7g056087 | 25.000 | 444 | 288 | 14 | 18 | 437 | 11 | 433 | 1.38e-28 | 117 |
| MS.gene22889.t1 | MTR_3g465950 | 29.730 | 296 | 183 | 9 | 61 | 341 | 63 | 348 | 1.08e-27 | 115 |
| MS.gene22889.t1 | MTR_5g090880 | 26.764 | 411 | 250 | 16 | 63 | 438 | 64 | 458 | 1.12e-25 | 109 |
| MS.gene22889.t1 | MTR_3g070170 | 24.299 | 428 | 256 | 12 | 54 | 435 | 54 | 459 | 6.31e-25 | 107 |
| MS.gene22889.t1 | MTR_3g101960 | 26.097 | 433 | 269 | 16 | 25 | 432 | 30 | 436 | 2.76e-24 | 105 |
| MS.gene22889.t1 | MTR_3g102020 | 26.526 | 426 | 275 | 17 | 26 | 432 | 31 | 437 | 5.68e-24 | 104 |
| MS.gene22889.t1 | MTR_5g026320 | 25.058 | 431 | 273 | 15 | 24 | 430 | 33 | 437 | 6.71e-24 | 104 |
| MS.gene22889.t1 | MTR_3g101900 | 25.990 | 404 | 247 | 16 | 66 | 442 | 66 | 444 | 8.62e-23 | 100 |
| MS.gene22889.t1 | MTR_7g114417 | 70.149 | 67 | 16 | 2 | 79 | 144 | 20 | 83 | 1.54e-22 | 91.7 |
| MS.gene22889.t1 | MTR_7g114417 | 83.721 | 43 | 6 | 1 | 1 | 43 | 1 | 42 | 2.20e-14 | 68.6 |
| MS.gene22889.t1 | MTR_3g450710 | 23.641 | 423 | 252 | 14 | 44 | 428 | 43 | 432 | 2.68e-22 | 99.8 |
| MS.gene22889.t1 | MTR_4g013050 | 33.735 | 166 | 96 | 5 | 19 | 180 | 12 | 167 | 8.16e-22 | 97.4 |
| MS.gene22889.t1 | MTR_3g086020 | 23.982 | 442 | 273 | 19 | 17 | 439 | 11 | 408 | 1.37e-21 | 97.1 |
| MS.gene22889.t1 | MTR_3g450690 | 23.441 | 401 | 239 | 13 | 63 | 428 | 69 | 436 | 4.67e-21 | 95.9 |
| MS.gene22889.t1 | MTR_8g041770 | 24.561 | 399 | 264 | 13 | 25 | 405 | 31 | 410 | 7.18e-21 | 95.1 |
| MS.gene22889.t1 | MTR_3g465870 | 28.070 | 285 | 181 | 12 | 18 | 286 | 19 | 295 | 7.30e-21 | 95.1 |
| MS.gene22889.t1 | MTR_3g101930 | 25.806 | 403 | 242 | 18 | 38 | 405 | 44 | 424 | 8.97e-21 | 94.7 |
| MS.gene22889.t1 | MTR_3g102010 | 24.885 | 434 | 271 | 16 | 26 | 432 | 32 | 437 | 9.60e-21 | 94.7 |
| MS.gene22889.t1 | MTR_3g088420 | 24.362 | 431 | 259 | 19 | 25 | 428 | 25 | 415 | 1.25e-20 | 94.4 |
| MS.gene22889.t1 | MTR_5g084870 | 24.201 | 438 | 258 | 21 | 17 | 422 | 9 | 404 | 3.50e-20 | 93.2 |
| MS.gene22889.t1 | MTR_3g101970 | 24.194 | 434 | 289 | 12 | 25 | 446 | 30 | 435 | 3.75e-20 | 92.8 |
| MS.gene22889.t1 | MTR_4g022825 | 24.711 | 433 | 262 | 19 | 25 | 428 | 25 | 422 | 2.67e-19 | 90.5 |
| MS.gene22889.t1 | MTR_4g094842 | 24.256 | 437 | 262 | 17 | 25 | 427 | 28 | 429 | 2.97e-18 | 87.4 |
| MS.gene22889.t1 | MTR_4g088765 | 45.333 | 75 | 41 | 0 | 4 | 78 | 2 | 76 | 7.98e-18 | 79.7 |
| MS.gene22889.t1 | MTR_4g022720 | 23.218 | 435 | 271 | 16 | 25 | 433 | 25 | 422 | 1.57e-17 | 85.1 |
| MS.gene22889.t1 | MTR_1g094790 | 24.221 | 417 | 255 | 16 | 17 | 399 | 9 | 398 | 4.70e-17 | 83.6 |
| MS.gene22889.t1 | MTR_8g079710 | 23.721 | 430 | 270 | 19 | 25 | 428 | 30 | 427 | 8.08e-17 | 82.8 |
| MS.gene22889.t1 | MTR_4g094838 | 22.794 | 408 | 253 | 14 | 25 | 405 | 29 | 401 | 1.35e-16 | 82.0 |
| MS.gene22889.t1 | MTR_8g467580 | 23.961 | 409 | 261 | 19 | 17 | 399 | 9 | 393 | 1.43e-15 | 79.0 |
| MS.gene22889.t1 | MTR_4g094835 | 22.222 | 432 | 276 | 18 | 25 | 430 | 33 | 430 | 4.19e-15 | 77.4 |
| MS.gene22889.t1 | MTR_4g022290 | 23.192 | 401 | 254 | 15 | 25 | 401 | 31 | 401 | 1.66e-14 | 75.9 |
| MS.gene22889.t1 | MTR_0190s0020 | 22.406 | 424 | 284 | 15 | 25 | 430 | 30 | 426 | 2.10e-14 | 75.5 |
| MS.gene22889.t1 | MTR_3g028210 | 22.222 | 432 | 273 | 15 | 46 | 435 | 46 | 456 | 1.96e-13 | 72.4 |
| MS.gene22889.t1 | MTR_4g094832 | 24.576 | 354 | 224 | 15 | 96 | 430 | 85 | 414 | 9.74e-13 | 70.1 |
| MS.gene22889.t1 | MTR_6g016815 | 29.452 | 146 | 92 | 6 | 61 | 198 | 64 | 206 | 6.49e-12 | 67.4 |
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene22889.t1 | AT5G17540 | 48.817 | 465 | 226 | 8 | 4 | 461 | 2 | 461 | 1.48e-149 | 434 |
| MS.gene22889.t1 | AT3G03480 | 47.427 | 447 | 225 | 7 | 2 | 444 | 10 | 450 | 2.47e-138 | 405 |
| MS.gene22889.t1 | AT3G48720 | 32.832 | 399 | 256 | 8 | 1 | 396 | 1 | 390 | 5.23e-76 | 244 |
| MS.gene22889.t1 | AT5G41040 | 34.937 | 395 | 237 | 8 | 11 | 396 | 33 | 416 | 3.68e-75 | 243 |
| MS.gene22889.t1 | AT5G41040 | 34.937 | 395 | 237 | 8 | 11 | 396 | 17 | 400 | 4.81e-75 | 242 |
| MS.gene22889.t1 | AT5G63560 | 35.787 | 394 | 229 | 9 | 11 | 396 | 9 | 386 | 5.06e-75 | 241 |
| MS.gene22889.t1 | AT1G27620 | 30.070 | 429 | 274 | 10 | 14 | 435 | 12 | 421 | 7.43e-59 | 200 |
| MS.gene22889.t1 | AT1G03390 | 30.201 | 447 | 288 | 14 | 9 | 441 | 23 | 459 | 4.16e-56 | 193 |
| MS.gene22889.t1 | AT5G48930 | 28.440 | 436 | 283 | 13 | 18 | 439 | 10 | 430 | 1.81e-48 | 172 |
| MS.gene22889.t1 | AT2G19070 | 29.630 | 459 | 278 | 14 | 10 | 439 | 5 | 447 | 1.34e-46 | 167 |
| MS.gene22889.t1 | AT3G62160 | 29.950 | 404 | 247 | 11 | 7 | 398 | 1 | 380 | 1.46e-46 | 167 |
| MS.gene22889.t1 | AT2G40230 | 29.500 | 400 | 256 | 12 | 11 | 396 | 5 | 392 | 9.56e-45 | 162 |
| MS.gene22889.t1 | AT5G57840 | 27.609 | 460 | 284 | 16 | 11 | 444 | 3 | 439 | 1.49e-42 | 156 |
| MS.gene22889.t1 | AT1G28680 | 30.189 | 371 | 238 | 12 | 32 | 391 | 27 | 387 | 6.74e-42 | 155 |
| MS.gene22889.t1 | AT5G07080 | 29.854 | 412 | 254 | 13 | 1 | 391 | 6 | 403 | 1.38e-41 | 154 |
| MS.gene22889.t1 | AT1G65450 | 27.851 | 456 | 299 | 15 | 4 | 443 | 8 | 449 | 2.95e-41 | 153 |
| MS.gene22889.t1 | AT3G47170 | 27.521 | 476 | 285 | 17 | 9 | 443 | 10 | 466 | 6.91e-39 | 147 |
| MS.gene22889.t1 | AT1G28680 | 29.891 | 368 | 230 | 13 | 32 | 381 | 27 | 384 | 3.28e-38 | 143 |
| MS.gene22889.t1 | AT2G25150 | 28.330 | 473 | 276 | 17 | 6 | 442 | 7 | 452 | 3.12e-35 | 136 |
| MS.gene22889.t1 | AT2G23510 | 28.916 | 415 | 246 | 17 | 3 | 391 | 7 | 398 | 1.89e-34 | 134 |
| MS.gene22889.t1 | AT1G31490 | 24.020 | 408 | 264 | 14 | 8 | 393 | 3 | 386 | 2.07e-26 | 111 |
| MS.gene22889.t1 | AT5G42830 | 27.727 | 440 | 261 | 18 | 21 | 433 | 27 | 436 | 1.04e-25 | 109 |
| MS.gene22889.t1 | AT4G31910 | 26.483 | 472 | 295 | 21 | 6 | 441 | 2 | 457 | 1.56e-25 | 108 |
| MS.gene22889.t1 | AT4G15390 | 25.450 | 444 | 277 | 20 | 17 | 435 | 14 | 428 | 1.73e-25 | 108 |
| MS.gene22889.t1 | AT4G15390 | 25.450 | 444 | 277 | 20 | 17 | 435 | 14 | 428 | 1.73e-25 | 108 |
| MS.gene22889.t1 | AT5G07860 | 25.823 | 395 | 242 | 15 | 63 | 433 | 69 | 436 | 3.20e-23 | 102 |
| MS.gene22889.t1 | AT3G50280 | 25.862 | 406 | 255 | 16 | 25 | 409 | 28 | 408 | 1.24e-22 | 100 |
| MS.gene22889.t1 | AT3G50270 | 25.121 | 414 | 267 | 13 | 25 | 417 | 30 | 421 | 1.97e-22 | 99.8 |
| MS.gene22889.t1 | AT3G26040 | 23.457 | 405 | 253 | 15 | 17 | 394 | 9 | 383 | 4.95e-22 | 98.6 |
| MS.gene22889.t1 | AT1G78990 | 24.798 | 371 | 243 | 11 | 44 | 394 | 45 | 399 | 1.94e-21 | 97.1 |
| MS.gene22889.t1 | AT1G24430 | 25.400 | 437 | 275 | 18 | 17 | 435 | 11 | 414 | 2.30e-21 | 96.7 |
| MS.gene22889.t1 | AT5G38130 | 25.679 | 405 | 257 | 15 | 25 | 410 | 48 | 427 | 3.21e-21 | 96.3 |
| MS.gene22889.t1 | AT5G07850 | 24.053 | 449 | 269 | 19 | 21 | 433 | 28 | 440 | 1.20e-20 | 94.7 |
| MS.gene22889.t1 | AT1G24420 | 25.390 | 449 | 264 | 18 | 17 | 435 | 11 | 418 | 1.37e-20 | 94.4 |
| MS.gene22889.t1 | AT1G24420 | 25.390 | 449 | 264 | 18 | 17 | 435 | 11 | 418 | 1.37e-20 | 94.4 |
| MS.gene22889.t1 | AT1G32910 | 23.333 | 390 | 248 | 12 | 64 | 431 | 63 | 423 | 5.94e-20 | 92.4 |
| MS.gene22889.t1 | AT1G65450 | 26.351 | 296 | 196 | 10 | 159 | 443 | 1 | 285 | 8.77e-20 | 89.7 |
| MS.gene22889.t1 | AT3G30280 | 24.434 | 442 | 277 | 19 | 17 | 432 | 12 | 422 | 1.02e-19 | 91.7 |
| MS.gene22889.t1 | AT5G47980 | 25.446 | 448 | 278 | 18 | 15 | 436 | 9 | 426 | 5.82e-19 | 89.4 |
| MS.gene22889.t1 | AT2G39980 | 23.628 | 419 | 254 | 12 | 66 | 432 | 62 | 466 | 7.54e-19 | 89.4 |
| MS.gene22889.t1 | AT5G47950 | 24.138 | 435 | 270 | 19 | 17 | 432 | 12 | 405 | 3.25e-18 | 87.0 |
| MS.gene22889.t1 | AT5G23970 | 25.901 | 444 | 262 | 19 | 17 | 435 | 9 | 410 | 7.36e-18 | 85.9 |
| MS.gene22889.t1 | AT5G16410 | 23.699 | 346 | 233 | 12 | 66 | 394 | 91 | 422 | 8.98e-18 | 85.9 |
| MS.gene22889.t1 | AT3G50300 | 23.784 | 370 | 244 | 12 | 63 | 410 | 56 | 409 | 1.10e-15 | 79.3 |
| MS.gene22889.t1 | AT4G15400 | 26.126 | 444 | 272 | 20 | 17 | 438 | 11 | 420 | 6.98e-15 | 77.0 |
| MS.gene22889.t1 | AT5G23940 | 24.088 | 411 | 266 | 16 | 53 | 437 | 53 | 443 | 9.14e-15 | 76.6 |
| MS.gene22889.t1 | AT3G50280 | 24.113 | 282 | 189 | 10 | 140 | 409 | 10 | 278 | 7.61e-13 | 69.7 |
Find 0 sgRNAs with CRISPR-Local
Find 227 sgRNAs with CRISPR-GE
CRISPR-Local
| sgRNA_sequence | on_target_score | Position | Region |
|---|
CRISPR-GE
| badsite warning | sgRNA_sequence | Strand | Position | Region | GC_content |
|---|---|---|---|---|---|
| !! | TGTAATTAATATAAATTCAT+AGG | - | 51741:40808-40827 | MS.gene22889:intergenic | 10.0% |
| !!! | ATATATAGTTTTCTAAATTT+TGG | - | 51741:40219-40238 | MS.gene22889:intergenic | 10.0% |
| !! | AAAATTTGTCGAATAAAAAA+TGG | - | 51741:40084-40103 | MS.gene22889:intergenic | 15.0% |
| !! | AAATAATTGCATTATATAAG+TGG | - | 51741:40749-40768 | MS.gene22889:intergenic | 15.0% |
| !! | TAAGTATAAAATGACATAAA+AGG | + | 51741:39926-39945 | MS.gene22889:intron | 15.0% |
| !! | TGATCAATAATTAAATTTCA+AGG | - | 51741:39552-39571 | MS.gene22889:intergenic | 15.0% |
| !!! | AAACACATTATTTTTAATAG+CGG | - | 51741:39879-39898 | MS.gene22889:intergenic | 15.0% |
| !!! | TATATAATTTATTTGTTGTG+TGG | - | 51741:40573-40592 | MS.gene22889:intergenic | 15.0% |
| !! | ACTTAAAAATAGTGTAAAGT+TGG | - | 51741:41022-41041 | MS.gene22889:intergenic | 20.0% |
| !! | GAAAGATGTTTATTTACAAA+GGG | + | 51741:41965-41984 | MS.gene22889:CDS | 20.0% |
| !! | GATAATTAGAATTAAATGAC+AGG | + | 51741:41310-41329 | MS.gene22889:intron | 20.0% |
| !! | GCTATTAAAAATAATGTGTT+TGG | + | 51741:39878-39897 | MS.gene22889:intron | 20.0% |
| !! | TAACATATACATACATCTTT+AGG | + | 51741:41277-41296 | MS.gene22889:intron | 20.0% |
| !! | TATCCCAAAAAATAAAATGA+GGG | - | 51741:40967-40986 | MS.gene22889:intergenic | 20.0% |
| !! | TCTTATATGAATTAAAAGCA+AGG | + | 51741:40175-40194 | MS.gene22889:intron | 20.0% |
| !! | TTATCCCAAAAAATAAAATG+AGG | - | 51741:40968-40987 | MS.gene22889:intergenic | 20.0% |
| !!! | AAACATCCTTGAAATTTTAT+AGG | + | 51741:39577-39596 | MS.gene22889:intron | 20.0% |
| !!! | AACACATTATTTTTAATAGC+GGG | - | 51741:39878-39897 | MS.gene22889:intergenic | 20.0% |
| !!! | TACCATTTTTCGTAAAAAAT+TGG | - | 51741:40994-41013 | MS.gene22889:intergenic | 20.0% |
| ! | AAAATGATTGTAATGAGATC+AGG | + | 51741:39649-39668 | MS.gene22889:intron | 25.0% |
| ! | AAATGATTGTAATGAGATCA+GGG | + | 51741:39650-39669 | MS.gene22889:intron | 25.0% |
| ! | AAGAGACCTATAAAATTTCA+AGG | - | 51741:39586-39605 | MS.gene22889:intergenic | 25.0% |
| ! | AAGTTCTCAGAAGTAAATTT+CGG | + | 51741:42022-42041 | MS.gene22889:CDS | 25.0% |
| ! | ATCCCAAAAAATAAAATGAG+GGG | - | 51741:40966-40985 | MS.gene22889:intergenic | 25.0% |
| ! | ATTTCACATTAAATATGCCT+TGG | - | 51741:41124-41143 | MS.gene22889:intergenic | 25.0% |
| ! | GATATAACACTTGATCAATT+TGG | + | 51741:39405-39424 | MS.gene22889:CDS | 25.0% |
| ! | GGAAAGATGTTTATTTACAA+AGG | + | 51741:41964-41983 | MS.gene22889:CDS | 25.0% |
| ! | TCAATAATATATTCTGATCC+TGG | - | 51741:39483-39502 | MS.gene22889:intergenic | 25.0% |
| ! | TCGTTTGTATATATACACAT+AGG | - | 51741:40543-40562 | MS.gene22889:intergenic | 25.0% |
| ! | TTTCACATTAAATATGCCTT+GGG | - | 51741:41123-41142 | MS.gene22889:intergenic | 25.0% |
| !! | ATTATCATGCATTAACTTGA+TGG | - | 51741:40912-40931 | MS.gene22889:intergenic | 25.0% |
| !! | GAATTTTAGACTTGGAATAA+AGG | + | 51741:39717-39736 | MS.gene22889:intron | 25.0% |
| !! | TATTCCAAGTCTAAAATTCA+GGG | - | 51741:39716-39735 | MS.gene22889:intergenic | 25.0% |
| !! | TGATCTCATTACAATCATTT+TGG | - | 51741:39650-39669 | MS.gene22889:intergenic | 25.0% |
| !! | TTATTCCAAGTCTAAAATTC+AGG | - | 51741:39717-39736 | MS.gene22889:intergenic | 25.0% |
| !!! | AGCCAATTTTTTACGAAAAA+TGG | + | 51741:40989-41008 | MS.gene22889:intron | 25.0% |
| !!! | CTATTAGTCTTTGAAGTTAT+CGG | - | 51741:41063-41082 | MS.gene22889:intergenic | 25.0% |
| !!! | TAATTTTCAAGCTTTCTAAC+CGG | + | 51741:40928-40947 | MS.gene22889:intron | 25.0% |
| !!! | TATTAGTCTTTGAAGTTATC+GGG | - | 51741:41062-41081 | MS.gene22889:intergenic | 25.0% |
| !!! | TCAATGACATTAGTCTTTTT+AGG | - | 51741:41234-41253 | MS.gene22889:intergenic | 25.0% |
| !!! | TTTTGGTGTTCACTTTTTTT+AGG | - | 51741:40202-40221 | MS.gene22889:intergenic | 25.0% |
| AAAGAGCTAAATGATATGCT+TGG | + | 51741:42196-42215 | MS.gene22889:CDS | 30.0% | |
| ACTTTATGATGCTTACAACA+TGG | + | 51741:40654-40673 | MS.gene22889:intron | 30.0% | |
| ATAGAATTTCTTGGAAGCAA+GGG | - | 51741:39452-39471 | MS.gene22889:intergenic | 30.0% | |
| ATCTTATCACTGCATGTTAT+TGG | + | 51741:41678-41697 | MS.gene22889:CDS | 30.0% | |
| CATGTTTAAGAACCTTAACA+GGG | - | 51741:39266-39285 | MS.gene22889:intergenic | 30.0% | |
| CTAAAGCGAACTATAATATG+AGG | - | 51741:40845-40864 | MS.gene22889:intergenic | 30.0% | |
| CTCATATTATAGTTCGCTTT+AGG | + | 51741:40843-40862 | MS.gene22889:intron | 30.0% | |
| CTTTATGATGCTTACAACAT+GGG | + | 51741:40655-40674 | MS.gene22889:intron | 30.0% | |
| GAACATCGTATAGAATTTCT+TGG | - | 51741:39461-39480 | MS.gene22889:intergenic | 30.0% | |
| TATAGAATTTCTTGGAAGCA+AGG | - | 51741:39453-39472 | MS.gene22889:intergenic | 30.0% | |
| TGGTAATTGTATTGCTTTCT+CGG | + | 51741:41814-41833 | MS.gene22889:CDS | 30.0% | |
| ! | ATTCCAAGTCTAAAATTCAG+GGG | - | 51741:39715-39734 | MS.gene22889:intergenic | 30.0% |
| ! | GAATTAGCTTATAAGCTTGT+TGG | - | 51741:40480-40499 | MS.gene22889:intergenic | 30.0% |
| ! | GGCAGATTTTATGGTTATTA+AGG | + | 51741:41943-41962 | MS.gene22889:CDS | 30.0% |
| !! | AATAAACTGTGAGGTTTTAG+TGG | + | 51741:40256-40275 | MS.gene22889:intron | 30.0% |
| !! | TAATAGCTTGTTTGGAATAG+CGG | + | 51741:41077-41096 | MS.gene22889:intron | 30.0% |
| !! | TCAAAGACTAATAGCTTGTT+TGG | + | 51741:41069-41088 | MS.gene22889:intron | 30.0% |
| !!! | ACATAGTTTTGTCTATCATG+AGG | - | 51741:39743-39762 | MS.gene22889:intergenic | 30.0% |
| !!! | GACCCCTCATTTTATTTTTT+GGG | + | 51741:40961-40980 | MS.gene22889:intron | 30.0% |
| AAACCTCTTCATATCTTCAG+GGG | - | 51741:42173-42192 | MS.gene22888:intergenic | 35.0% | |
| AACTCAACTGCATAACCTAA+TGG | - | 51741:41875-41894 | MS.gene22889:intergenic | 35.0% | |
| AAGAATGCAAAAGGAGAAGA+AGG | + | 51741:42124-42143 | MS.gene22889:CDS | 35.0% | |
| AAGGTAGACAAGATGAAACT+AGG | - | 51741:42250-42269 | MS.gene22889:intergenic | 35.0% | |
| AATATCCGACAAGCAACAAA+GGG | - | 51741:41793-41812 | MS.gene22889:intergenic | 35.0% | |
| ACAAACCTCTTCATATCTTC+AGG | - | 51741:42175-42194 | MS.gene22889:intergenic | 35.0% | |
| ACTCAACTGCATAACCTAAT+GGG | - | 51741:41874-41893 | MS.gene22889:intergenic | 35.0% | |
| ACTTTGTCATGAAGCAAAGA+TGG | + | 51741:40621-40640 | MS.gene22889:intron | 35.0% | |
| AGAATGCAAAAGGAGAAGAA+GGG | + | 51741:42125-42144 | MS.gene22889:CDS | 35.0% | |
| ATATACACATAGGCTGTGTT+TGG | - | 51741:40533-40552 | MS.gene22889:intergenic | 35.0% | |
| ATGGAATAGGGAGATTCTAA+TGG | + | 51741:41472-41491 | MS.gene22889:CDS | 35.0% | |
| CAAACCTCTTCATATCTTCA+GGG | - | 51741:42174-42193 | MS.gene22889:intergenic | 35.0% | |
| CATTCAACCTGTATGGAATA+GGG | + | 51741:41460-41479 | MS.gene22889:CDS | 35.0% | |
| CTCAGAAGTAAATTTCGGAT+GGG | + | 51741:42027-42046 | MS.gene22889:CDS | 35.0% | |
| CTGTGAAGAAGAAAGATTGA+TGG | - | 51741:41595-41614 | MS.gene22889:intergenic | 35.0% | |
| GAAATTCTATACGATGTTCC+AGG | + | 51741:39462-39481 | MS.gene22889:CDS | 35.0% | |
| GACAAAACTATGTCTCTGTT+TGG | + | 51741:39750-39769 | MS.gene22889:intron | 35.0% | |
| GCATGTTTAAGAACCTTAAC+AGG | - | 51741:39267-39286 | MS.gene22889:intergenic | 35.0% | |
| GGTAAAATTAGCTGTTGAAG+TGG | + | 51741:39899-39918 | MS.gene22889:intron | 35.0% | |
| GTAACCAAAATCATCCTACA+AGG | + | 51741:42218-42237 | MS.gene22889:CDS | 35.0% | |
| GTATTTGTTCGTATTCACGA+TGG | - | 51741:41526-41545 | MS.gene22889:intergenic | 35.0% | |
| GTGCATTGTAAAGTTGTATG+AGG | - | 51741:40691-40710 | MS.gene22889:intergenic | 35.0% | |
| TAATATCCGACAAGCAACAA+AGG | - | 51741:41794-41813 | MS.gene22889:intergenic | 35.0% | |
| TACAAAGGGAAGAACTTGTA+TGG | + | 51741:41979-41998 | MS.gene22889:CDS | 35.0% | |
| TCAGAAGTAAATTTCGGATG+GGG | + | 51741:42028-42047 | MS.gene22889:CDS | 35.0% | |
| TCTCAGAAGTAAATTTCGGA+TGG | + | 51741:42026-42045 | MS.gene22889:CDS | 35.0% | |
| TCTTCCTTGATGTACGTATT+TGG | - | 51741:41554-41573 | MS.gene22889:intergenic | 35.0% | |
| TGACGAAAGACAAATATGAC+AGG | - | 51741:39219-39238 | MS.gene22889:intergenic | 35.0% | |
| TTGAGCTTGAACCATACAAT+GGG | + | 51741:41368-41387 | MS.gene22889:CDS | 35.0% | |
| TTTAGGCCTTAGAATGTGTT+AGG | + | 51741:40860-40879 | MS.gene22889:intron | 35.0% | |
| ! | AAGTGTTGTAAGTGTAGCAT+TGG | - | 51741:40726-40745 | MS.gene22889:intergenic | 35.0% |
| ! | AGTTTAACTTCATGAGGAGT+GGG | - | 51741:39153-39172 | MS.gene22889:intergenic | 35.0% |
| ! | GCATTCTTTGGCAGATTTTA+TGG | + | 51741:41934-41953 | MS.gene22889:CDS | 35.0% |
| ! | TCTCCTTTTGCATTCTTATG+CGG | - | 51741:42121-42140 | MS.gene22889:intergenic | 35.0% |
| ! | TTGTTGCTTGTCGGATATTA+TGG | + | 51741:41794-41813 | MS.gene22889:CDS | 35.0% |
| !!! | GGACCCCTCATTTTATTTTT+TGG | + | 51741:40960-40979 | MS.gene22889:intron | 35.0% |
| AACCTCTTCATATCTTCAGG+GGG | - | 51741:42172-42191 | MS.gene22889:intergenic | 40.0% | |
| AACCTTCCATTCAACCTGTA+TGG | + | 51741:41453-41472 | MS.gene22889:CDS | 40.0% | |
| AGAATCTCCCTATTCCATAC+AGG | - | 51741:41470-41489 | MS.gene22889:intergenic | 40.0% | |
| AGCAAAAGCTCAAGTTACAG+AGG | + | 51741:41904-41923 | MS.gene22889:CDS | 40.0% | |
| ATCATTCGTACCTCTTCATC+TGG | - | 51741:41734-41753 | MS.gene22889:intergenic | 40.0% | |
| ATTCTTATGCGGGACAAGAA+AGG | - | 51741:42110-42129 | MS.gene22889:intergenic | 40.0% | |
| ATTTCTTGGAAGCAAGGGAA+TGG | - | 51741:39447-39466 | MS.gene22889:intergenic | 40.0% | |
| CAAGTGTGGTGGTTTCATAA+TGG | + | 51741:41343-41362 | MS.gene22889:CDS | 40.0% | |
| CATTGTATGGTTCAAGCTCA+AGG | - | 51741:41369-41388 | MS.gene22889:intergenic | 40.0% | |
| CCATTCAACCTGTATGGAAT+AGG | + | 51741:41459-41478 | MS.gene22889:CDS | 40.0% | |
| CTTGAGCTTGAACCATACAA+TGG | + | 51741:41367-41386 | MS.gene22889:CDS | 40.0% | |
| CTTTCCATCTCATTCAGTGT+CGG | - | 51741:40886-40905 | MS.gene22889:intergenic | 40.0% | |
| GAAAGAGAAAGACCCTGTTA+AGG | + | 51741:39251-39270 | MS.gene22889:CDS | 40.0% | |
| GAGACAATTCTTGACTGCAT+GGG | + | 51741:41406-41425 | MS.gene22889:CDS | 40.0% | |
| GATAGCTGATAGCTTATAGC+TGG | + | 51741:39848-39867 | MS.gene22889:intron | 40.0% | |
| GCCTTCTTGATCATCTATGT+CGG | - | 51741:39181-39200 | MS.gene22889:intergenic | 40.0% | |
| GGATCAAAATGTGACGTGTT+TGG | - | 51741:40459-40478 | MS.gene22889:intergenic | 40.0% | |
| GGGTCTTTCTCTTTCATTGA+TGG | - | 51741:39246-39265 | MS.gene22889:intergenic | 40.0% | |
| GTTTATTACTATCCAGCTGC+AGG | + | 51741:39303-39322 | MS.gene22889:CDS | 40.0% | |
| GTTTATTGCAAGTCACGACA+TGG | - | 51741:40243-40262 | MS.gene22889:intergenic | 40.0% | |
| TAAGACCTGTATGAGTCGAA+CGG | - | 51741:39511-39530 | MS.gene22889:intergenic | 40.0% | |
| TCCGACATAGATGATCAAGA+AGG | + | 51741:39177-39196 | MS.gene22889:CDS | 40.0% | |
| TCCTTGATGTACGTATTTGG+CGG | - | 51741:41551-41570 | MS.gene22889:intergenic | 40.0% | |
| TGACAGGAAGATTGAAACGA+AGG | - | 51741:39203-39222 | MS.gene22889:intergenic | 40.0% | |
| TGAGACAATTCTTGACTGCA+TGG | + | 51741:41405-41424 | MS.gene22889:CDS | 40.0% | |
| TTTCTTGGAAGCAAGGGAAT+GGG | - | 51741:39446-39465 | MS.gene22889:intergenic | 40.0% | |
| ! | AGAGGAGTACATGCATTCTT+TGG | + | 51741:41922-41941 | MS.gene22889:CDS | 40.0% |
| ! | CACTCCTTGTAGGATGATTT+TGG | - | 51741:42225-42244 | MS.gene22889:intergenic | 40.0% |
| ! | CCTATTCCATACAGGTTGAA+TGG | - | 51741:41462-41481 | MS.gene22889:intergenic | 40.0% |
| ! | CTCCTTTTGCATTCTTATGC+GGG | - | 51741:42120-42139 | MS.gene22889:intergenic | 40.0% |
| ! | GAACTTGTATGGTGTCAGAT+TGG | + | 51741:41990-42009 | MS.gene22889:CDS | 40.0% |
| ! | GAGAGGAGTTTAACTTCATG+AGG | - | 51741:39159-39178 | MS.gene22889:intergenic | 40.0% |
| ! | GAGTTTAACTTCATGAGGAG+TGG | - | 51741:39154-39173 | MS.gene22889:intergenic | 40.0% |
| ! | GTGACTTGCAATAAACTGTG+AGG | + | 51741:40247-40266 | MS.gene22889:intron | 40.0% |
| ! | GTGGAGTTGGATCTTTTCTT+GGG | + | 51741:42080-42099 | MS.gene22889:CDS | 40.0% |
| ! | TGGAGTTGGATCTTTTCTTG+GGG | + | 51741:42081-42100 | MS.gene22889:CDS | 40.0% |
| ! | TGTTGTAAGTGTAGCATTGG+CGG | - | 51741:40723-40742 | MS.gene22889:intergenic | 40.0% |
| ! | TTCCATACAGGTTGAATGGA+AGG | - | 51741:41458-41477 | MS.gene22889:intergenic | 40.0% |
| AAGACCTGTATGAGTCGAAC+GGG | - | 51741:39510-39529 | MS.gene22889:intergenic | 45.0% | |
| AAGCTTTCTAACCGGTCCAA+CGG | + | 51741:40936-40955 | MS.gene22889:intron | 45.0% | |
| AGCCTTAAAACGTGGGAACA+TGG | + | 51741:40284-40303 | MS.gene22889:intron | 45.0% | |
| ATTACTATCCAGCTGCAGGA+AGG | + | 51741:39307-39326 | MS.gene22889:CDS | 45.0% | |
| CACCACTATTGTTCACAGTG+CGG | + | 51741:39094-39113 | MS.gene22889:CDS | 45.0% | |
| CATTCACCGCTAAAACAGAC+AGG | + | 51741:41193-41212 | MS.gene22889:intron | 45.0% | |
| CGTATGCAGTGCATTGAGAA+AGG | - | 51741:41658-41677 | MS.gene22889:intergenic | 45.0% | |
| CTTGATCATCTATGTCGGAG+AGG | - | 51741:39176-39195 | MS.gene22889:intergenic | 45.0% | |
| GATTGTAATGAGATCAGGGC+TGG | + | 51741:39654-39673 | MS.gene22889:intron | 45.0% | |
| GCCTTAAAACGTGGGAACAT+GGG | + | 51741:40285-40304 | MS.gene22889:intron | 45.0% | |
| GGCAGTAAGCCTTAAAACGT+GGG | + | 51741:40277-40296 | MS.gene22889:intron | 45.0% | |
| GTCCCGCATAAGAATGCAAA+AGG | + | 51741:42115-42134 | MS.gene22889:CDS | 45.0% | |
| GTGCATTGAGAAAGGTGAAG+TGG | - | 51741:41650-41669 | MS.gene22889:intergenic | 45.0% | |
| TCCGCCAAATACGTACATCA+AGG | + | 51741:41547-41566 | MS.gene22889:CDS | 45.0% | |
| TGGCAGTAAGCCTTAAAACG+TGG | + | 51741:40276-40295 | MS.gene22889:intron | 45.0% | |
| TGTCGGCCTAACACATTCTA+AGG | - | 51741:40869-40888 | MS.gene22889:intergenic | 45.0% | |
| TTAAAACGTGGGAACATGGG+TGG | + | 51741:40288-40307 | MS.gene22889:intron | 45.0% | |
| TTCTTGGAAGCAAGGGAATG+GGG | - | 51741:39445-39464 | MS.gene22889:intergenic | 45.0% | |
| TTGAACCATACAATGGGCGA+TGG | + | 51741:41374-41393 | MS.gene22889:CDS | 45.0% | |
| ! | ACCCATGTTCCCACGTTTTA+AGG | - | 51741:40289-40308 | MS.gene22889:intergenic | 45.0% |
| ! | AGGCCCCTGAATTTTAGACT+TGG | + | 51741:39709-39728 | MS.gene22889:intron | 45.0% |
| ! | GAGCTTTGTGGAAACCCATT+AGG | + | 51741:41857-41876 | MS.gene22889:CDS | 45.0% |
| ! | GCTAACCCTTTGTTGCTTGT+CGG | + | 51741:41785-41804 | MS.gene22889:CDS | 45.0% |
| ! | GGAGTTGGATCTTTTCTTGG+GGG | + | 51741:42082-42101 | MS.gene22889:CDS | 45.0% |
| ! | GGTGGAGTTGGATCTTTTCT+TGG | + | 51741:42079-42098 | MS.gene22889:CDS | 45.0% |
| ! | GTGTATGGTGGAGCAGTAAA+AGG | + | 51741:42058-42077 | MS.gene22889:CDS | 45.0% |
| ! | TATGGTGGAGCAGTAAAAGG+TGG | + | 51741:42061-42080 | MS.gene22889:CDS | 45.0% |
| !! | AAACTAGGAGCACTCCTTGT+AGG | - | 51741:42235-42254 | MS.gene22889:intergenic | 45.0% |
| !! | AAGTTGATGGTGGATTGCAC+TGG | + | 51741:39351-39370 | MS.gene22889:CDS | 45.0% |
| !! | AGTTGATGGTGGATTGCACT+GGG | + | 51741:39352-39371 | MS.gene22889:CDS | 45.0% |
| !! | GTAGCTCCTGTCTGTTTTAG+CGG | - | 51741:41202-41221 | MS.gene22889:intergenic | 45.0% |
| !! | TGGAAGTACCAACTCTGGTT+GGG | - | 51741:39124-39143 | MS.gene22889:intergenic | 45.0% |
| !! | TTTGCATTTCTAGCGTCCCA+AGG | + | 51741:41104-41123 | MS.gene22889:intron | 45.0% |
| !! | ATAATAAAATTAAATTAACA+AGG | + | 51741:40331-40350 | MS.gene22889:intron | 5.0% |
| AAATTCAGGGGCCTAAAGCG+AGG | - | 51741:39703-39722 | MS.gene22889:intergenic | 50.0% | |
| AATTCAGGGGCCTAAAGCGA+GGG | - | 51741:39702-39721 | MS.gene22889:intergenic | 50.0% | |
| ACCACTGCAAAGGAGCTTTG+TGG | + | 51741:41845-41864 | MS.gene22889:CDS | 50.0% | |
| ATCCAGCTGCAGGAAGGATT+AGG | + | 51741:39313-39332 | MS.gene22889:CDS | 50.0% | |
| CACTATTGTTCACAGTGCGG+AGG | + | 51741:39097-39116 | MS.gene22889:CDS | 50.0% | |
| CAGGTTACACGTCTCAAGTG+TGG | + | 51741:41329-41348 | MS.gene22889:intron | 50.0% | |
| CGATGGTTGCAAGTAACGTG+TGG | - | 51741:41509-41528 | MS.gene22889:intergenic | 50.0% | |
| CTCCGCACTGTGAACAATAG+TGG | - | 51741:39099-39118 | MS.gene22889:intergenic | 50.0% | |
| CTTGACTGCATGGGCAGAAA+TGG | + | 51741:41415-41434 | MS.gene22889:CDS | 50.0% | |
| GAGAAAGGTGAAGTGGAACC+AGG | - | 51741:41643-41662 | MS.gene22889:intergenic | 50.0% | |
| GCATCGTTAATGCACGTTCG+AGG | + | 51741:41756-41775 | MS.gene22889:CDS | 50.0% | |
| GGAGCAGTAAAAGGTGGAGT+TGG | + | 51741:42067-42086 | MS.gene22889:CDS | 50.0% | |
| GTTACACGTCTCAAGTGTGG+TGG | + | 51741:41332-41351 | MS.gene22889:CDS | 50.0% | |
| TAAAATGAGGGGTCCACCGT+TGG | - | 51741:40955-40974 | MS.gene22889:intergenic | 50.0% | |
| TAGGCCGACACTGAATGAGA+TGG | + | 51741:40879-40898 | MS.gene22889:intron | 50.0% | |
| TCCACAAAGCTCCTTTGCAG+TGG | - | 51741:41849-41868 | MS.gene22889:intergenic | 50.0% | |
| TCCAGCTGCAGGAAGGATTA+GGG | + | 51741:39314-39333 | MS.gene22889:CDS | 50.0% | |
| TCTTCAGGGGGCAAGCAAAT+TGG | - | 51741:42160-42179 | MS.gene22889:intergenic | 50.0% | |
| TCTTGGAAGCAAGGGAATGG+GGG | - | 51741:39444-39463 | MS.gene22889:intergenic | 50.0% | |
| TGCCCCCTGAAGATATGAAG+AGG | + | 51741:42167-42186 | MS.gene22889:CDS | 50.0% | |
| TGGTTGCAAGTAACGTGTGG+CGG | - | 51741:41506-41525 | MS.gene22889:intergenic | 50.0% | |
| ! | CCACCTGCAATGCTTTTGTG+CGG | - | 51741:41709-41728 | MS.gene22889:intergenic | 50.0% |
| !! | CTGGAAGTACCAACTCTGGT+TGG | - | 51741:39125-39144 | MS.gene22889:intergenic | 50.0% |
| !! | GTTGATGGTGGATTGCACTG+GGG | + | 51741:39353-39372 | MS.gene22889:CDS | 50.0% |
| !! | GTTTGGGTTGCCTTACCCTT+AGG | - | 51741:39680-39699 | MS.gene22889:intergenic | 50.0% |
| AGCTGCAGGAAGGATTAGGG+AGG | + | 51741:39317-39336 | MS.gene22889:CDS | 55.0% | |
| CAGCTCCATCGCCCATTGTA+TGG | - | 51741:41382-41401 | MS.gene22889:intergenic | 55.0% | |
| CATACAATGGGCGATGGAGC+TGG | + | 51741:41380-41399 | MS.gene22889:CDS | 55.0% | |
| CCTGTATGAGTCGAACGGGA+CGG | - | 51741:39506-39525 | MS.gene22889:intergenic | 55.0% | |
| CTTTCTAACCGGTCCAACGG+TGG | + | 51741:40939-40958 | MS.gene22889:intron | 55.0% | |
| GCAACCCAAACCCTCGCTTT+AGG | + | 51741:39689-39708 | MS.gene22889:intron | 55.0% | |
| GCTGCAGGAAGGATTAGGGA+GGG | + | 51741:39318-39337 | MS.gene22889:CDS | 55.0% | |
| GGATGGGGTGAAGCTGTGTA+TGG | + | 51741:42043-42062 | MS.gene22889:CDS | 55.0% | |
| GGTTGCAAGTAACGTGTGGC+GGG | - | 51741:41505-41524 | MS.gene22889:intergenic | 55.0% | |
| TCCCTAATCCTTCCTGCAGC+TGG | - | 51741:39318-39337 | MS.gene22889:intergenic | 55.0% | |
| TGGGGTGAAGCTGTGTATGG+TGG | + | 51741:42046-42065 | MS.gene22889:CDS | 55.0% | |
| !! | ATGAGATCAGGGCTGGCCTA+AGG | + | 51741:39661-39680 | MS.gene22889:intron | 55.0% |
| !! | ATGGTGGATTGCACTGGGGA+GGG | + | 51741:39357-39376 | MS.gene22889:CDS | 55.0% |
| !! | CCGCACAAAAGCATTGCAGG+TGG | + | 51741:41706-41725 | MS.gene22889:CDS | 55.0% |
| !! | CTGCCGCACAAAAGCATTGC+AGG | + | 51741:41703-41722 | MS.gene22889:CDS | 55.0% |
| !! | GAAGGATTAGGGAGGGTGCT+GGG | + | 51741:39325-39344 | MS.gene22889:CDS | 55.0% |
| !! | GCAGCTGGAAGTACCAACTC+TGG | - | 51741:39129-39148 | MS.gene22889:intergenic | 55.0% |
| !! | TGAGATCAGGGCTGGCCTAA+GGG | + | 51741:39662-39681 | MS.gene22889:intron | 55.0% |
| !! | TGCTGGGCGAAAGTTGATGG+TGG | + | 51741:39341-39360 | MS.gene22889:CDS | 55.0% |
| AGGGGCCTAAAGCGAGGGTT+TGG | - | 51741:39697-39716 | MS.gene22889:intergenic | 60.0% | |
| CCGTCCCGTTCGACTCATAC+AGG | + | 51741:39503-39522 | MS.gene22889:CDS | 60.0% | |
| GCAGGTGGAGCCAGATGAAG+AGG | + | 51741:41721-41740 | MS.gene22889:CDS | 60.0% | |
| GCATGGGCAGAAATGGCTCG+AGG | + | 51741:41422-41441 | MS.gene22889:CDS | 60.0% | |
| GGCAGCAGTCACCACTGCAA+AGG | + | 51741:41835-41854 | MS.gene22889:CDS | 60.0% | |
| GGGGCCTAAAGCGAGGGTTT+GGG | - | 51741:39696-39715 | MS.gene22889:intergenic | 60.0% | |
| TCATGAGGAGTGGGTGCAGC+TGG | - | 51741:39144-39163 | MS.gene22889:intergenic | 60.0% | |
| TGGAACCAGGCGACGAATCG+CGG | - | 51741:41630-41649 | MS.gene22889:intergenic | 60.0% | |
| ! | GGAAGGATTAGGGAGGGTGC+TGG | + | 51741:39324-39343 | MS.gene22889:CDS | 60.0% |
| !! | GATGGTGGATTGCACTGGGG+AGG | + | 51741:39356-39375 | MS.gene22889:CDS | 60.0% |
| !! | GGGTGCTGGGCGAAAGTTGA+TGG | + | 51741:39338-39357 | MS.gene22889:CDS | 60.0% |
| !! | TCAGGGCTGGCCTAAGGGTA+AGG | + | 51741:39667-39686 | MS.gene22889:intron | 60.0% |
| CATAGCCGCGATTCGTCGCC+TGG | + | 51741:41622-41641 | MS.gene22889:CDS | 65.0% | |
| GCGGAGGTCCCAACCAGAGT+TGG | + | 51741:39113-39132 | MS.gene22889:CDS | 65.0% | |
| TGAGGGGTCCACCGTTGGAC+CGG | - | 51741:40950-40969 | MS.gene22889:intergenic | 65.0% |
| Chromosome | Type | Strat | End | Strand | Name |
|---|---|---|---|---|---|
| 51741 | gene | 39081 | 42273 | 39081 | ID=MS.gene22889 |
| 51741 | mRNA | 39081 | 42273 | 39081 | ID=MS.gene22889.t1;Parent=MS.gene22889 |
| 51741 | exon | 39081 | 39524 | 39081 | ID=MS.gene22889.t1.exon1;Parent=MS.gene22889.t1 |
| 51741 | CDS | 39081 | 39524 | 39081 | ID=cds.MS.gene22889.t1;Parent=MS.gene22889.t1 |
| 51741 | exon | 41332 | 42273 | 41332 | ID=MS.gene22889.t1.exon2;Parent=MS.gene22889.t1 |
| 51741 | CDS | 41332 | 42273 | 41332 | ID=cds.MS.gene22889.t1;Parent=MS.gene22889.t1 |
| Gene Sequence |
| Protein sequence |
