Alfalfa Gene Editing Database
Alfalfa Gene Editing Database
Nr:
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene072966.t1 | XP_003603472.1 | 88.4 | 302 | 23 | 2 | 1 | 299 | 1 | 293 | 3.90E-129 | 471.1 |
Swissprot:
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene072966.t1 | P82715 | 64.0 | 242 | 78 | 3 | 66 | 299 | 57 | 297 | 1.6e-86 | 320.9 |
Trembl:
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene072966.t1 | G7JBQ7 | 88.4 | 302 | 23 | 2 | 1 | 299 | 1 | 293 | 2.8e-129 | 471.1 |
TFs/TRs:
| Gene ID | Type | Classification |
|---|
Protein Kinases:
| Gene ID | Type | Classification |
|---|
Network:
Co-expression Network:
| Gene1 | Gene2 | correlation coefficient | p_value | FDR |
|---|---|---|---|---|
| MS.gene049137 | MS.gene072966 | 0.836146 | 1.11E-56 | -1.69E-46 |
| MS.gene049171 | MS.gene072966 | 0.860254 | 2.35E-63 | -1.69E-46 |
| MS.gene049173 | MS.gene072966 | 0.830489 | 2.85E-55 | -1.69E-46 |
| MS.gene049217 | MS.gene072966 | 0.920146 | 1.85E-87 | -1.69E-46 |
| MS.gene049222 | MS.gene072966 | 0.876367 | 1.48E-68 | -1.69E-46 |
| MS.gene049285 | MS.gene072966 | 0.899688 | 1.55E-77 | -1.69E-46 |
| MS.gene049320 | MS.gene072966 | 0.866729 | 2.30E-65 | -1.69E-46 |
| MS.gene049351 | MS.gene072966 | 0.803966 | 2.71E-49 | -1.69E-46 |
| MS.gene04939 | MS.gene072966 | 0.800664 | 1.30E-48 | -1.69E-46 |
| MS.gene049427 | MS.gene072966 | 0.85611 | 4.01E-62 | -1.69E-46 |
| MS.gene049609 | MS.gene072966 | 0.841441 | 4.74E-58 | -1.69E-46 |
| MS.gene049611 | MS.gene072966 | -0.800233 | 1.59E-48 | -1.69E-46 |
| MS.gene049614 | MS.gene072966 | 0.836659 | 8.22E-57 | -1.69E-46 |
| MS.gene049615 | MS.gene072966 | 0.802567 | 5.28E-49 | -1.69E-46 |
| MS.gene049627 | MS.gene072966 | 0.907022 | 7.94E-81 | -1.69E-46 |
| MS.gene049633 | MS.gene072966 | 0.813118 | 3.01E-51 | -1.69E-46 |
| MS.gene049760 | MS.gene072966 | 0.800751 | 1.24E-48 | -1.69E-46 |
| MS.gene049805 | MS.gene072966 | 0.834494 | 2.90E-56 | -1.69E-46 |
| MS.gene05010 | MS.gene072966 | 0.819557 | 1.09E-52 | -1.69E-46 |
| MS.gene050163 | MS.gene072966 | 0.915428 | 5.96E-85 | -1.69E-46 |
| MS.gene050165 | MS.gene072966 | 0.900302 | 8.39E-78 | -1.69E-46 |
| MS.gene050333 | MS.gene072966 | 0.887839 | 1.00E-72 | -1.69E-46 |
| MS.gene050353 | MS.gene072966 | -0.872371 | 3.35E-67 | -1.69E-46 |
| MS.gene050354 | MS.gene072966 | -0.804934 | 1.70E-49 | -1.69E-46 |
| MS.gene050444 | MS.gene072966 | 0.850131 | 2.07E-60 | -1.69E-46 |
| MS.gene050475 | MS.gene072966 | -0.846709 | 1.83E-59 | -1.69E-46 |
| MS.gene050504 | MS.gene072966 | 0.879431 | 1.25E-69 | -1.69E-46 |
| MS.gene050518 | MS.gene072966 | 0.867816 | 1.03E-65 | -1.69E-46 |
| MS.gene050538 | MS.gene072966 | 0.811188 | 7.93E-51 | -1.69E-46 |
| MS.gene050541 | MS.gene072966 | -0.84271 | 2.19E-58 | -1.69E-46 |
| MS.gene050577 | MS.gene072966 | 0.809703 | 1.66E-50 | -1.69E-46 |
| MS.gene050593 | MS.gene072966 | 0.817103 | 3.92E-52 | -1.69E-46 |
| MS.gene050612 | MS.gene072966 | 0.86594 | 4.10E-65 | -1.69E-46 |
| MS.gene050675 | MS.gene072966 | 0.857076 | 2.09E-62 | -1.69E-46 |
| MS.gene050699 | MS.gene072966 | 0.871261 | 7.82E-67 | -1.69E-46 |
| MS.gene050747 | MS.gene072966 | 0.841185 | 5.54E-58 | -1.69E-46 |
| MS.gene050767 | MS.gene072966 | 0.847378 | 1.20E-59 | -1.69E-46 |
| MS.gene050770 | MS.gene072966 | 0.850524 | 1.61E-60 | -1.69E-46 |
| MS.gene050772 | MS.gene072966 | 0.866201 | 3.39E-65 | -1.69E-46 |
| MS.gene050781 | MS.gene072966 | 0.817608 | 3.02E-52 | -1.69E-46 |
| MS.gene05080 | MS.gene072966 | 0.810343 | 1.21E-50 | -1.69E-46 |
| MS.gene050868 | MS.gene072966 | 0.814238 | 1.71E-51 | -1.69E-46 |
| MS.gene050871 | MS.gene072966 | 0.812458 | 4.20E-51 | -1.69E-46 |
| MS.gene050876 | MS.gene072966 | 0.816591 | 5.11E-52 | -1.69E-46 |
| MS.gene05087 | MS.gene072966 | 0.829936 | 3.89E-55 | -1.69E-46 |
| MS.gene050950 | MS.gene072966 | 0.834805 | 2.42E-56 | -1.69E-46 |
| MS.gene050986 | MS.gene072966 | 0.846409 | 2.21E-59 | -1.69E-46 |
| MS.gene05100 | MS.gene072966 | 0.883256 | 5.23E-71 | -1.69E-46 |
| MS.gene05101 | MS.gene072966 | 0.806615 | 7.55E-50 | -1.69E-46 |
| MS.gene051228 | MS.gene072966 | 0.832799 | 7.69E-56 | -1.69E-46 |
| MS.gene051317 | MS.gene072966 | 0.808038 | 3.77E-50 | -1.69E-46 |
| MS.gene051387 | MS.gene072966 | 0.816519 | 5.30E-52 | -1.69E-46 |
| MS.gene051434 | MS.gene072966 | 0.829831 | 4.13E-55 | -1.69E-46 |
| MS.gene051551 | MS.gene072966 | 0.828728 | 7.65E-55 | -1.69E-46 |
| MS.gene051564 | MS.gene072966 | 0.817272 | 3.59E-52 | -1.69E-46 |
| MS.gene051566 | MS.gene072966 | 0.823534 | 1.32E-53 | -1.69E-46 |
| MS.gene051666 | MS.gene072966 | 0.847654 | 1.01E-59 | -1.69E-46 |
| MS.gene051694 | MS.gene072966 | 0.910981 | 1.02E-82 | -1.69E-46 |
| MS.gene051810 | MS.gene072966 | 0.869558 | 2.83E-66 | -1.69E-46 |
| MS.gene051858 | MS.gene072966 | 0.897013 | 2.12E-76 | -1.69E-46 |
| MS.gene051949 | MS.gene072966 | 0.865036 | 7.90E-65 | -1.69E-46 |
| MS.gene052164 | MS.gene072966 | 0.823472 | 1.36E-53 | -1.69E-46 |
| MS.gene052271 | MS.gene072966 | 0.870037 | 1.97E-66 | -1.69E-46 |
| MS.gene052290 | MS.gene072966 | 0.80607 | 9.83E-50 | -1.69E-46 |
| MS.gene052379 | MS.gene072966 | 0.89986 | 1.30E-77 | -1.69E-46 |
| MS.gene052484 | MS.gene072966 | 0.803309 | 3.71E-49 | -1.69E-46 |
| MS.gene052486 | MS.gene072966 | 0.804537 | 2.06E-49 | -1.69E-46 |
| MS.gene052605 | MS.gene072966 | 0.802536 | 5.36E-49 | -1.69E-46 |
| MS.gene052615 | MS.gene072966 | 0.852143 | 5.60E-61 | -1.69E-46 |
| MS.gene052670 | MS.gene072966 | 0.840388 | 8.96E-58 | -1.69E-46 |
| MS.gene052870 | MS.gene072966 | 0.840568 | 8.04E-58 | -1.69E-46 |
| MS.gene052872 | MS.gene072966 | 0.845644 | 3.57E-59 | -1.69E-46 |
| MS.gene052916 | MS.gene072966 | 0.834616 | 2.70E-56 | -1.69E-46 |
| MS.gene052966 | MS.gene072966 | 0.825857 | 3.73E-54 | -1.69E-46 |
| MS.gene053009 | MS.gene072966 | 0.860378 | 2.15E-63 | -1.69E-46 |
| MS.gene053104 | MS.gene072966 | 0.809859 | 1.54E-50 | -1.69E-46 |
| MS.gene053107 | MS.gene072966 | 0.827055 | 1.93E-54 | -1.69E-46 |
| MS.gene053203 | MS.gene072966 | 0.848229 | 7.00E-60 | -1.69E-46 |
| MS.gene053207 | MS.gene072966 | 0.867019 | 1.86E-65 | -1.69E-46 |
| MS.gene053213 | MS.gene072966 | 0.879655 | 1.04E-69 | -1.69E-46 |
| MS.gene053285 | MS.gene072966 | 0.805915 | 1.06E-49 | -1.69E-46 |
| MS.gene053286 | MS.gene072966 | 0.87625 | 1.62E-68 | -1.69E-46 |
| MS.gene053322 | MS.gene072966 | 0.889133 | 3.18E-73 | -1.69E-46 |
| MS.gene053436 | MS.gene072966 | 0.800136 | 1.66E-48 | -1.69E-46 |
| MS.gene053561 | MS.gene072966 | -0.819669 | 1.03E-52 | -1.69E-46 |
| MS.gene053574 | MS.gene072966 | 0.817452 | 3.27E-52 | -1.69E-46 |
| MS.gene053632 | MS.gene072966 | 0.876888 | 9.76E-69 | -1.69E-46 |
| MS.gene053824 | MS.gene072966 | 0.82079 | 5.69E-53 | -1.69E-46 |
| MS.gene053915 | MS.gene072966 | 0.825468 | 4.61E-54 | -1.69E-46 |
| MS.gene054376 | MS.gene072966 | 0.828577 | 8.32E-55 | -1.69E-46 |
| MS.gene054408 | MS.gene072966 | 0.815941 | 7.14E-52 | -1.69E-46 |
| MS.gene054595 | MS.gene072966 | 0.830137 | 3.48E-55 | -1.69E-46 |
| MS.gene054600 | MS.gene072966 | 0.870859 | 1.06E-66 | -1.69E-46 |
| MS.gene054642 | MS.gene072966 | 0.896619 | 3.10E-76 | -1.69E-46 |
| MS.gene05470 | MS.gene072966 | 0.816036 | 6.80E-52 | -1.69E-46 |
| MS.gene054802 | MS.gene072966 | 0.863329 | 2.69E-64 | -1.69E-46 |
| MS.gene054803 | MS.gene072966 | 0.858295 | 9.09E-63 | -1.69E-46 |
| MS.gene054804 | MS.gene072966 | 0.864409 | 1.24E-64 | -1.69E-46 |
| MS.gene054927 | MS.gene072966 | 0.808598 | 2.86E-50 | -1.69E-46 |
| MS.gene054954 | MS.gene072966 | 0.869961 | 2.09E-66 | -1.69E-46 |
| MS.gene05505 | MS.gene072966 | 0.814744 | 1.32E-51 | -1.69E-46 |
| MS.gene055111 | MS.gene072966 | -0.809302 | 2.02E-50 | -1.69E-46 |
| MS.gene055154 | MS.gene072966 | -0.812677 | 3.76E-51 | -1.69E-46 |
| MS.gene055206 | MS.gene072966 | 0.868019 | 8.91E-66 | -1.69E-46 |
| MS.gene055212 | MS.gene072966 | 0.809987 | 1.44E-50 | -1.69E-46 |
| MS.gene055254 | MS.gene072966 | 0.811065 | 8.43E-51 | -1.69E-46 |
| MS.gene055362 | MS.gene072966 | 0.87997 | 8.07E-70 | -1.69E-46 |
| MS.gene055397 | MS.gene072966 | 0.868182 | 7.90E-66 | -1.69E-46 |
| MS.gene055412 | MS.gene072966 | 0.813153 | 2.96E-51 | -1.69E-46 |
| MS.gene055499 | MS.gene072966 | 0.88055 | 5.01E-70 | -1.69E-46 |
| MS.gene055502 | MS.gene072966 | 0.873161 | 1.82E-67 | -1.69E-46 |
| MS.gene055577 | MS.gene072966 | 0.878802 | 2.09E-69 | -1.69E-46 |
| MS.gene055634 | MS.gene072966 | 0.80658 | 7.68E-50 | -1.69E-46 |
| MS.gene055636 | MS.gene072966 | 0.860235 | 2.38E-63 | -1.69E-46 |
| MS.gene055638 | MS.gene072966 | 0.860255 | 2.35E-63 | -1.69E-46 |
| MS.gene055647 | MS.gene072966 | 0.87514 | 3.90E-68 | -1.69E-46 |
| MS.gene055722 | MS.gene072966 | 0.86658 | 2.57E-65 | -1.69E-46 |
| MS.gene055748 | MS.gene072966 | 0.812718 | 3.68E-51 | -1.69E-46 |
| MS.gene055751 | MS.gene072966 | 0.806267 | 8.94E-50 | -1.69E-46 |
| MS.gene05592 | MS.gene072966 | 0.834642 | 2.66E-56 | -1.69E-46 |
| MS.gene055941 | MS.gene072966 | 0.858642 | 7.16E-63 | -1.69E-46 |
| MS.gene055956 | MS.gene072966 | -0.818537 | 1.86E-52 | -1.69E-46 |
| MS.gene056083 | MS.gene072966 | 0.89333 | 6.95E-75 | -1.69E-46 |
| MS.gene056374 | MS.gene072966 | 0.872461 | 3.13E-67 | -1.69E-46 |
| MS.gene056409 | MS.gene072966 | 0.850301 | 1.85E-60 | -1.69E-46 |
| MS.gene056410 | MS.gene072966 | 0.81328 | 2.77E-51 | -1.69E-46 |
| MS.gene056449 | MS.gene072966 | 0.828772 | 7.46E-55 | -1.69E-46 |
| MS.gene056452 | MS.gene072966 | 0.804812 | 1.80E-49 | -1.69E-46 |
| MS.gene056504 | MS.gene072966 | 0.815263 | 1.01E-51 | -1.69E-46 |
| MS.gene056510 | MS.gene072966 | 0.851154 | 1.07E-60 | -1.69E-46 |
| MS.gene056549 | MS.gene072966 | 0.851159 | 1.06E-60 | -1.69E-46 |
| MS.gene056550 | MS.gene072966 | -0.837283 | 5.70E-57 | -1.69E-46 |
| MS.gene056610 | MS.gene072966 | 0.842084 | 3.21E-58 | -1.69E-46 |
| MS.gene056611 | MS.gene072966 | 0.8158 | 7.68E-52 | -1.69E-46 |
| MS.gene056657 | MS.gene072966 | 0.878527 | 2.61E-69 | -1.69E-46 |
| MS.gene056692 | MS.gene072966 | 0.842624 | 2.31E-58 | -1.69E-46 |
| MS.gene056897 | MS.gene072966 | 0.800839 | 1.19E-48 | -1.69E-46 |
| MS.gene056903 | MS.gene072966 | 0.813237 | 2.83E-51 | -1.69E-46 |
| MS.gene056946 | MS.gene072966 | 0.813912 | 2.01E-51 | -1.69E-46 |
| MS.gene057011 | MS.gene072966 | 0.856946 | 2.28E-62 | -1.69E-46 |
| MS.gene057123 | MS.gene072966 | 0.800612 | 1.33E-48 | -1.69E-46 |
| MS.gene057129 | MS.gene072966 | 0.880235 | 6.49E-70 | -1.69E-46 |
| MS.gene057146 | MS.gene072966 | 0.850831 | 1.32E-60 | -1.69E-46 |
| MS.gene057331 | MS.gene072966 | 0.830893 | 2.27E-55 | -1.69E-46 |
| MS.gene057416 | MS.gene072966 | 0.879057 | 1.70E-69 | -1.69E-46 |
| MS.gene057658 | MS.gene072966 | 0.825789 | 3.87E-54 | -1.69E-46 |
| MS.gene057831 | MS.gene072966 | 0.861461 | 1.01E-63 | -1.69E-46 |
| MS.gene057926 | MS.gene072966 | 0.823976 | 1.04E-53 | -1.69E-46 |
| MS.gene058019 | MS.gene072966 | 0.825403 | 4.78E-54 | -1.69E-46 |
| MS.gene058323 | MS.gene072966 | 0.852192 | 5.42E-61 | -1.69E-46 |
| MS.gene05837 | MS.gene072966 | 0.820477 | 6.72E-53 | -1.69E-46 |
| MS.gene058419 | MS.gene072966 | 0.874999 | 4.35E-68 | -1.69E-46 |
| MS.gene058544 | MS.gene072966 | 0.858391 | 8.51E-63 | -1.69E-46 |
| MS.gene058660 | MS.gene072966 | 0.811984 | 5.33E-51 | -1.69E-46 |
| MS.gene058723 | MS.gene072966 | 0.851302 | 9.70E-61 | -1.69E-46 |
| MS.gene058773 | MS.gene072966 | 0.902626 | 8.00E-79 | -1.69E-46 |
| MS.gene058838 | MS.gene072966 | 0.8111 | 8.29E-51 | -1.69E-46 |
| MS.gene05883 | MS.gene072966 | 0.856387 | 3.33E-62 | -1.69E-46 |
| MS.gene058993 | MS.gene072966 | 0.817109 | 3.91E-52 | -1.69E-46 |
| MS.gene059022 | MS.gene072966 | 0.881057 | 3.29E-70 | -1.69E-46 |
| MS.gene059023 | MS.gene072966 | 0.862673 | 4.29E-64 | -1.69E-46 |
| MS.gene059029 | MS.gene072966 | 0.889381 | 2.55E-73 | -1.69E-46 |
| MS.gene059079 | MS.gene072966 | 0.80417 | 2.46E-49 | -1.69E-46 |
| MS.gene059102 | MS.gene072966 | -0.832972 | 6.96E-56 | -1.69E-46 |
| MS.gene05912 | MS.gene072966 | 0.800291 | 1.54E-48 | -1.69E-46 |
| MS.gene05934 | MS.gene072966 | 0.856632 | 2.82E-62 | -1.69E-46 |
| MS.gene059479 | MS.gene072966 | -0.828241 | 1.00E-54 | -1.69E-46 |
| MS.gene059536 | MS.gene072966 | 0.870761 | 1.14E-66 | -1.69E-46 |
| MS.gene059677 | MS.gene072966 | 0.898672 | 4.22E-77 | -1.69E-46 |
| MS.gene059718 | MS.gene072966 | 0.899771 | 1.42E-77 | -1.69E-46 |
| MS.gene059756 | MS.gene072966 | 0.861509 | 9.76E-64 | -1.69E-46 |
| MS.gene059801 | MS.gene072966 | 0.845644 | 3.57E-59 | -1.69E-46 |
| MS.gene059858 | MS.gene072966 | 0.812542 | 4.02E-51 | -1.69E-46 |
| MS.gene059865 | MS.gene072966 | 0.82176 | 3.40E-53 | -1.69E-46 |
| MS.gene059902 | MS.gene072966 | 0.897325 | 1.57E-76 | -1.69E-46 |
| MS.gene059960 | MS.gene072966 | 0.888371 | 6.27E-73 | -1.69E-46 |
| MS.gene060193 | MS.gene072966 | 0.838357 | 3.02E-57 | -1.69E-46 |
| MS.gene060337 | MS.gene072966 | -0.80273 | 4.88E-49 | -1.69E-46 |
| MS.gene060356 | MS.gene072966 | 0.805111 | 1.56E-49 | -1.69E-46 |
| MS.gene060482 | MS.gene072966 | 0.819896 | 9.13E-53 | -1.69E-46 |
| MS.gene060602 | MS.gene072966 | -0.802937 | 4.43E-49 | -1.69E-46 |
| MS.gene060703 | MS.gene072966 | 0.828899 | 6.96E-55 | -1.69E-46 |
| MS.gene060762 | MS.gene072966 | 0.869251 | 3.56E-66 | -1.69E-46 |
| MS.gene06077 | MS.gene072966 | 0.845765 | 3.31E-59 | -1.69E-46 |
| MS.gene060804 | MS.gene072966 | 0.825501 | 4.53E-54 | -1.69E-46 |
| MS.gene060818 | MS.gene072966 | 0.843565 | 1.30E-58 | -1.69E-46 |
| MS.gene06092 | MS.gene072966 | 0.864937 | 8.49E-65 | -1.69E-46 |
| MS.gene061134 | MS.gene072966 | 0.837239 | 5.84E-57 | -1.69E-46 |
| MS.gene061150 | MS.gene072966 | 0.91035 | 2.07E-82 | -1.69E-46 |
| MS.gene061171 | MS.gene072966 | 0.862772 | 4.00E-64 | -1.69E-46 |
| MS.gene061200 | MS.gene072966 | 0.898734 | 3.97E-77 | -1.69E-46 |
PPI:
| Gene1 | Gene2 | Type |
|---|
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene072966.t1 | MTR_3g108040 | 86.139 | 303 | 28 | 4 | 1 | 299 | 1 | 293 | 7.94e-172 | 477 |
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene072966.t1 | AT5G11450 | 57.525 | 299 | 115 | 4 | 8 | 299 | 22 | 315 | 6.02e-115 | 334 |
| MS.gene072966.t1 | AT5G11450 | 57.525 | 299 | 115 | 4 | 8 | 299 | 4 | 297 | 6.95e-115 | 333 |
Find 48 sgRNAs with CRISPR-Local
Find 228 sgRNAs with CRISPR-GE
CRISPR-Local
| sgRNA_sequence | on_target_score | Position | Region |
|---|---|---|---|
| CCTGAAGATAAGGTTGTTAT+TGG | 0.169527 | 3.4:-93856876 | None:intergenic |
| ACAAAGATCCCTGGAGATTT+TGG | 0.175536 | 3.4:+93860757 | MS.gene072966:CDS |
| GAAATACTTACCATTGAATT+AGG | 0.251354 | 3.4:-93859695 | None:intergenic |
| AGGAGCATTTGGTTTGGTTT+TGG | 0.268058 | 3.4:-93856925 | None:intergenic |
| TCTTATCCTTCAAGTTTATA+AGG | 0.274761 | 3.4:-93858579 | None:intergenic |
| AAGAGGAATTTACCAGAAAA+AGG | 0.297343 | 3.4:-93857061 | None:intergenic |
| AGATTGAAGGCGAACCTTAC+TGG | 0.380241 | 3.4:+93859645 | MS.gene072966:intron |
| CCAATAACAACCTTATCTTC+AGG | 0.404699 | 3.4:+93856876 | MS.gene072966:CDS |
| CTGAAGATAAGGTTGTTATT+GGG | 0.405745 | 3.4:-93856875 | None:intergenic |
| GGATTGTTGGAAGGAGCATT+TGG | 0.408319 | 3.4:-93856936 | None:intergenic |
| CTGAAGAATCAGGAATTTAC+CGG | 0.413569 | 3.4:+93859799 | MS.gene072966:CDS |
| TGCAAACCTTATAAACTTGA+AGG | 0.413975 | 3.4:+93858573 | MS.gene072966:CDS |
| AAGAATAAGAGCTGGATTGT+TGG | 0.426768 | 3.4:-93856852 | None:intergenic |
| ACTTCAACAAGACCCCAAAA+TGG | 0.433609 | 3.4:+93857188 | MS.gene072966:CDS |
| ATTGTCTCCTCACAGATTGA+AGG | 0.445126 | 3.4:+93859632 | MS.gene072966:intron |
| GTTGGAAGGAGCATTTGGTT+TGG | 0.448463 | 3.4:-93856931 | None:intergenic |
| GTTGTACAGTCTGAAGAATC+AGG | 0.450686 | 3.4:+93859789 | MS.gene072966:intron |
| GCAGCCGATGAATATCGTTC+TGG | 0.459979 | 3.4:-93858108 | None:intergenic |
| AATCTCCAGGGATCTTTGTA+TGG | 0.474697 | 3.4:-93860753 | None:intergenic |
| ACTTGAAGGATAAGAGCAAA+TGG | 0.476008 | 3.4:+93858587 | MS.gene072966:CDS |
| AAGAGGGTAAAGATAAGAAT+AGG | 0.477402 | 3.4:-93857235 | None:intergenic |
| GGATTACCCTCCTGAAGATA+AGG | 0.481706 | 3.4:-93856886 | None:intergenic |
| TCGTAAATCACCTAATTCAA+TGG | 0.488014 | 3.4:+93859685 | MS.gene072966:CDS |
| TTTAGCTGACAAATCTTCAC+TGG | 0.488647 | 3.4:+93858636 | MS.gene072966:CDS |
| TTTATAAGGTTTGCACTTGG+AGG | 0.505460 | 3.4:-93858565 | None:intergenic |
| TTCCTCCATACAAAGATCCC+TGG | 0.524136 | 3.4:+93860748 | MS.gene072966:CDS |
| TGCATCGAGAACTGAACTCT+CGG | 0.532100 | 3.4:-93859368 | None:intergenic |
| TTATAAGGTTTGCACTTGGA+GGG | 0.533271 | 3.4:-93858564 | None:intergenic |
| TTATTGGGAAGAATAAGAGC+TGG | 0.537380 | 3.4:-93856860 | None:intergenic |
| AATTAGGTGATTTACGAATG+AGG | 0.544454 | 3.4:-93859679 | None:intergenic |
| TTTATCATCGGATTGTTGGA+AGG | 0.566618 | 3.4:-93856945 | None:intergenic |
| AGGTATTCATAATACCAGTA+AGG | 0.568849 | 3.4:-93859659 | None:intergenic |
| ATGGACTGCAAAAGATGTTG+TGG | 0.582234 | 3.4:+93858606 | MS.gene072966:CDS |
| CAATCTCATCATTTCCGTCA+CGG | 0.585889 | 3.4:+93858446 | MS.gene072966:CDS |
| ACTGAGGGTCGAAGCGCTGA+TGG | 0.592389 | 3.4:-93860150 | None:intergenic |
| ATAAGAGCTGGATTGTTGGA+AGG | 0.595730 | 3.4:-93856848 | None:intergenic |
| AAGTTTATAAGGTTTGCACT+TGG | 0.598414 | 3.4:-93858568 | None:intergenic |
| CTGTTGAAGCAACATAATGC+CGG | 0.605398 | 3.4:-93859818 | None:intergenic |
| CTCCAGGGATCTTTGTATGG+AGG | 0.613390 | 3.4:-93860750 | None:intergenic |
| AAAGCCAGAACGATATTCAT+CGG | 0.615878 | 3.4:+93858104 | MS.gene072966:CDS |
| ATAACAACCTTATCTTCAGG+AGG | 0.618318 | 3.4:+93856879 | MS.gene072966:CDS |
| CTCGGCTGAGCGCTGAACTG+AGG | 0.632575 | 3.4:-93859350 | None:intergenic |
| AATTCCTTGCAGCTAATGCG+CGG | 0.633327 | 3.4:+93858388 | MS.gene072966:intron |
| GCTTCAACAGCAGAAAGAGA+TGG | 0.651152 | 3.4:+93859831 | MS.gene072966:CDS |
| TAACAACCTTATCTTCAGGA+GGG | 0.664496 | 3.4:+93856880 | MS.gene072966:CDS |
| AGATTGAGGAAATACCGTGA+CGG | 0.681795 | 3.4:-93858460 | None:intergenic |
| TTGTTAGAGATAGTGAAGTG+AGG | 0.696186 | 3.4:-93857030 | None:intergenic |
| CTTCGACCCTCAGTCCACAG+TGG | 0.711960 | 3.4:+93860159 | MS.gene072966:CDS |
CRISPR-GE
| badsite warning | sgRNA_sequence | Strand | Position | Region | GC_content |
|---|---|---|---|---|---|
| !! | AAAACGAAAATAAAATAAAA+TGG | - | chr3.4:93857320-93857339 | None:intergenic | 10.0% |
| !! | AACTATAAATAAAGAAATAA+GGG | - | chr3.4:93857788-93857807 | None:intergenic | 10.0% |
| !! | AATATCAGAAATAAATTTAA+AGG | - | chr3.4:93859308-93859327 | None:intergenic | 10.0% |
| !! | TATTTATAGTTGTTATAAAT+TGG | + | chr3.4:93857797-93857816 | MS.gene072966:intron | 10.0% |
| !! | AAAAAATTATTAGAATGTCA+AGG | - | chr3.4:93860658-93860677 | None:intergenic | 15.0% |
| !! | AAAAATTATTCATCTATCAA+TGG | + | chr3.4:93860432-93860451 | MS.gene072966:intron | 15.0% |
| !! | AAAACTATAATTAAACTAGT+TGG | + | chr3.4:93857990-93858009 | MS.gene072966:intron | 15.0% |
| !! | AAAATGATCATAAAAAATAC+TGG | + | chr3.4:93858852-93858871 | MS.gene072966:intron | 15.0% |
| !! | AAAATTATTCATCTATCAAT+GGG | + | chr3.4:93860433-93860452 | MS.gene072966:intron | 15.0% |
| !! | CAACTATAAATAAAGAAATA+AGG | - | chr3.4:93857789-93857808 | None:intergenic | 15.0% |
| !!! | AAAATATTGATTTAACATGT+TGG | - | chr3.4:93858913-93858932 | None:intergenic | 15.0% |
| !!! | ACTAATATGTAAATAGTTTT+AGG | - | chr3.4:93859093-93859112 | None:intergenic | 15.0% |
| !!! | TAATAATTTTTTATGCAGAT+GGG | + | chr3.4:93860666-93860685 | MS.gene072966:intron | 15.0% |
| !!! | TAGTTTAATTATAGTTTTGT+TGG | - | chr3.4:93857988-93858007 | None:intergenic | 15.0% |
| !!! | TGTTACAAATTTACATATTT+TGG | + | chr3.4:93859584-93859603 | MS.gene072966:intron | 15.0% |
| !! | AACTCTTTCCATATAATTAA+AGG | + | chr3.4:93858070-93858089 | MS.gene072966:intron | 20.0% |
| !! | ACTAGATATTATCTCTAATT+GGG | + | chr3.4:93858801-93858820 | MS.gene072966:intron | 20.0% |
| !! | ACTCTTTCCATATAATTAAA+GGG | + | chr3.4:93858071-93858090 | MS.gene072966:intron | 20.0% |
| !! | AGATCCATAGAAAAAAAATA+AGG | + | chr3.4:93860030-93860049 | MS.gene072966:intron | 20.0% |
| !! | AGATTTAAAGATTAATGAGT+TGG | + | chr3.4:93857545-93857564 | MS.gene072966:intron | 20.0% |
| !! | ATGTTATTGATATTGTTGAA+TGG | + | chr3.4:93857861-93857880 | MS.gene072966:intron | 20.0% |
| !! | ATTAGAATTCATATTGTTCT+CGG | - | chr3.4:93859163-93859182 | None:intergenic | 20.0% |
| !! | ATTTACTCTTGCTAATAATT+TGG | - | chr3.4:93857932-93857951 | None:intergenic | 20.0% |
| !! | TGGAAACAAATTGAAAAAAA+AGG | + | chr3.4:93857720-93857739 | MS.gene072966:intron | 20.0% |
| !! | TGTTATTGATATTGTTGAAT+GGG | + | chr3.4:93857862-93857881 | MS.gene072966:intron | 20.0% |
| !!! | AATAATTTTTTATGCAGATG+GGG | + | chr3.4:93860667-93860686 | MS.gene072966:intron | 20.0% |
| !!! | ATGATTTGAAATAGTATGTT+AGG | - | chr3.4:93860555-93860574 | None:intergenic | 20.0% |
| !!! | ATTCGTTAATTTTCAAATGA+AGG | - | chr3.4:93860608-93860627 | None:intergenic | 20.0% |
| !!! | CTAAAAATTTTGTCTTCAAA+TGG | + | chr3.4:93857268-93857287 | MS.gene072966:CDS | 20.0% |
| !!! | CTAATAATTTTTTATGCAGA+TGG | + | chr3.4:93860665-93860684 | MS.gene072966:intron | 20.0% |
| !!! | TCTTTTTTGGAAAAGAATAA+AGG | + | chr3.4:93860408-93860427 | MS.gene072966:intron | 20.0% |
| !!! | TGAAAAATCTCTTTTATCAT+CGG | - | chr3.4:93856960-93856979 | None:intergenic | 20.0% |
| !!! | TTAGCCTTATTTTTTTTCTA+TGG | - | chr3.4:93860037-93860056 | None:intergenic | 20.0% |
| !!! | TTCTTTTTTTAAGGAAATTG+TGG | + | chr3.4:93859731-93859750 | MS.gene072966:intron | 20.0% |
| !!! | TTGAAGACAAAATTTTTAGA+GGG | - | chr3.4:93857267-93857286 | None:intergenic | 20.0% |
| !!! | TTTGAAGACAAAATTTTTAG+AGG | - | chr3.4:93857268-93857287 | None:intergenic | 20.0% |
| ! | AAAGTAGGAATAATTTGAGA+GGG | - | chr3.4:93859861-93859880 | None:intergenic | 25.0% |
| ! | AATATTGGATACAAGAATGA+AGG | + | chr3.4:93859055-93859074 | MS.gene072966:intron | 25.0% |
| ! | AGATAATATCTAGTGAGTAA+TGG | - | chr3.4:93858795-93858814 | None:intergenic | 25.0% |
| ! | ATAATTTGGAGATGTGTTAA+TGG | - | chr3.4:93857918-93857937 | None:intergenic | 25.0% |
| ! | ATATTGGATACAAGAATGAA+GGG | + | chr3.4:93859056-93859075 | MS.gene072966:intron | 25.0% |
| ! | CACTAGATATTATCTCTAAT+TGG | + | chr3.4:93858800-93858819 | MS.gene072966:intron | 25.0% |
| ! | CGAAAATAAAATAAAATGGC+AGG | - | chr3.4:93857316-93857335 | None:intergenic | 25.0% |
| ! | GAAATACTTACCATTGAATT+AGG | - | chr3.4:93859698-93859717 | None:intergenic | 25.0% |
| ! | GAGAACAATATGAATTCTAA+TGG | + | chr3.4:93859162-93859181 | MS.gene072966:intron | 25.0% |
| ! | GATAATATCTAGTGAGTAAT+GGG | - | chr3.4:93858794-93858813 | None:intergenic | 25.0% |
| ! | GATTCTACCCTTTAATTATA+TGG | - | chr3.4:93858081-93858100 | None:intergenic | 25.0% |
| ! | GTTCTCAGTAAGAATTTATA+TGG | - | chr3.4:93860378-93860397 | None:intergenic | 25.0% |
| ! | TAAAGTAGGAATAATTTGAG+AGG | - | chr3.4:93859862-93859881 | None:intergenic | 25.0% |
| ! | TAATAATTGTGCTTGATTTC+AGG | + | chr3.4:93860116-93860135 | MS.gene072966:intron | 25.0% |
| ! | TAGAAGGTTTGATGTAATAT+TGG | + | chr3.4:93859040-93859059 | MS.gene072966:intron | 25.0% |
| !! | AACAAACAAATCACATGTTT+TGG | - | chr3.4:93859532-93859551 | None:intergenic | 25.0% |
| !! | AATGAACTTCTTTTCTCAAT+GGG | - | chr3.4:93857837-93857856 | None:intergenic | 25.0% |
| !! | ACAAACAAATCACATGTTTT+GGG | - | chr3.4:93859531-93859550 | None:intergenic | 25.0% |
| !! | ATCATTTTATATCGCTTATC+TGG | - | chr3.4:93858840-93858859 | None:intergenic | 25.0% |
| !! | TAATGAACTTCTTTTCTCAA+TGG | - | chr3.4:93857838-93857857 | None:intergenic | 25.0% |
| !! | TCTTATCCTTCAAGTTTATA+AGG | - | chr3.4:93858582-93858601 | None:intergenic | 25.0% |
| !! | TTTAAAGATTAATGAGTTGG+TGG | + | chr3.4:93857548-93857567 | MS.gene072966:intron | 25.0% |
| !! | TTTTCCCATTAAATTCAGAT+AGG | + | chr3.4:93858541-93858560 | MS.gene072966:intron | 25.0% |
| !!! | AAGTTTTCATTGATTGTTGT+AGG | + | chr3.4:93858042-93858061 | MS.gene072966:intron | 25.0% |
| !!! | AGCAATTTTAATCCAGAAAA+AGG | - | chr3.4:93858363-93858382 | None:intergenic | 25.0% |
| !!! | CCTTTGAACAATATTTTGAT+GGG | - | chr3.4:93860581-93860600 | None:intergenic | 25.0% |
| !!! | GAAAATGATAAAGCATTGAA+TGG | - | chr3.4:93858514-93858533 | None:intergenic | 25.0% |
| !!! | TCCTTTGAACAATATTTTGA+TGG | - | chr3.4:93860582-93860601 | None:intergenic | 25.0% |
| !!! | TGGTGCATTTTCTTTTTTTA+AGG | + | chr3.4:93859722-93859741 | MS.gene072966:intron | 25.0% |
| AAAAAAGAAAATGCACCAAG+AGG | - | chr3.4:93859720-93859739 | None:intergenic | 30.0% | |
| AACAATCAATGAAAACTTGC+AGG | - | chr3.4:93858040-93858059 | None:intergenic | 30.0% | |
| AACTATAGTTTAACCATGTG+GGG | - | chr3.4:93858989-93859008 | None:intergenic | 30.0% | |
| AAGAGGAATTTACCAGAAAA+AGG | - | chr3.4:93857064-93857083 | None:intergenic | 30.0% | |
| AAGAGGGTAAAGATAAGAAT+AGG | - | chr3.4:93857238-93857257 | None:intergenic | 30.0% | |
| AAGCAATAAATGCAAGAAAG+AGG | - | chr3.4:93857081-93857100 | None:intergenic | 30.0% | |
| AAGTTTATAAGGTTTGCACT+TGG | - | chr3.4:93858571-93858590 | None:intergenic | 30.0% | |
| AATTAGGTGATTTACGAATG+AGG | - | chr3.4:93859682-93859701 | None:intergenic | 30.0% | |
| AATTCACATTAGAATGCACA+AGG | - | chr3.4:93859912-93859931 | None:intergenic | 30.0% | |
| AGCAAGAGTAAATAATGCTT+TGG | + | chr3.4:93857939-93857958 | MS.gene072966:intron | 30.0% | |
| AGGTATTCATAATACCAGTA+AGG | - | chr3.4:93859662-93859681 | None:intergenic | 30.0% | |
| ATACTTGTTCCAGAGATAAA+AGG | + | chr3.4:93860005-93860024 | MS.gene072966:intron | 30.0% | |
| CAAAAAAACTTACGAGAAAG+TGG | - | chr3.4:93858135-93858154 | None:intergenic | 30.0% | |
| CAACTATAGTTTAACCATGT+GGG | - | chr3.4:93858990-93859009 | None:intergenic | 30.0% | |
| CCCATCAAAATATTGTTCAA+AGG | + | chr3.4:93860578-93860597 | MS.gene072966:intron | 30.0% | |
| CCTAAAGAATACAACTTCAA+AGG | - | chr3.4:93859223-93859242 | None:intergenic | 30.0% | |
| GCTTAAACATTGAACTTAGA+AGG | + | chr3.4:93859024-93859043 | MS.gene072966:intron | 30.0% | |
| GTTACTCATGCTATTCTTAT+TGG | + | chr3.4:93858665-93858684 | MS.gene072966:intron | 30.0% | |
| TAAAATAAAATGGCAGGCAA+AGG | - | chr3.4:93857310-93857329 | None:intergenic | 30.0% | |
| TCAACTATAGTTTAACCATG+TGG | - | chr3.4:93858991-93859010 | None:intergenic | 30.0% | |
| TCGTAAATCACCTAATTCAA+TGG | + | chr3.4:93859685-93859704 | MS.gene072966:CDS | 30.0% | |
| TGCAAACCTTATAAACTTGA+AGG | + | chr3.4:93858573-93858592 | MS.gene072966:CDS | 30.0% | |
| TTCAGTAGAAAATGAAGACT+TGG | - | chr3.4:93860517-93860536 | None:intergenic | 30.0% | |
| TTTCAAGCAATATTATGCAG+AGG | - | chr3.4:93859938-93859957 | None:intergenic | 30.0% | |
| ! | AATTTGTTTCCAGTTTAAGC+GGG | - | chr3.4:93857712-93857731 | None:intergenic | 30.0% |
| ! | ATCCAAAAAAGAAGCCATTT+TGG | - | chr3.4:93857205-93857224 | None:intergenic | 30.0% |
| ! | CAATTTGTTTCCAGTTTAAG+CGG | - | chr3.4:93857713-93857732 | None:intergenic | 30.0% |
| ! | CTGAAGATAAGGTTGTTATT+GGG | - | chr3.4:93856878-93856897 | None:intergenic | 30.0% |
| ! | GGTGTATGTGATTTTTACTT+TGG | + | chr3.4:93859752-93859771 | MS.gene072966:intron | 30.0% |
| ! | GTTTCTGTTATAGCTTTTCT+AGG | - | chr3.4:93857404-93857423 | None:intergenic | 30.0% |
| ! | TGTGTTAATGGCTAGTTATA+TGG | - | chr3.4:93857906-93857925 | None:intergenic | 30.0% |
| ! | TTCTTCTTCTTCTTCTAGAA+GGG | + | chr3.4:93856988-93857007 | MS.gene072966:CDS | 30.0% |
| !! | AAGTTGACTTGACAATAGTT+TGG | + | chr3.4:93860348-93860367 | MS.gene072966:intron | 30.0% |
| !! | CCTTTGAAGTTGTATTCTTT+AGG | + | chr3.4:93859220-93859239 | MS.gene072966:intron | 30.0% |
| !! | TCCAAAAAAGAAGCCATTTT+GGG | - | chr3.4:93857204-93857223 | None:intergenic | 30.0% |
| !!! | ATTTGGTTTGGTTTTGGTTT+TGG | - | chr3.4:93856922-93856941 | None:intergenic | 30.0% |
| !!! | TTTGGTTTTGGTTTTGGTTA+AGG | - | chr3.4:93856910-93856929 | None:intergenic | 30.0% |
| !!! | TTTGGTTTTGGTTTTGGTTT+TGG | - | chr3.4:93856916-93856935 | None:intergenic | 30.0% |
| !!! | TTTTTTTGTCTTCCTTTGCA+AGG | + | chr3.4:93858147-93858166 | MS.gene072966:intron | 30.0% |
| AAAGCCAGAACGATATTCAT+CGG | + | chr3.4:93858104-93858123 | MS.gene072966:CDS | 35.0% | |
| AAGAATAAGAGCTGGATTGT+TGG | - | chr3.4:93856855-93856874 | None:intergenic | 35.0% | |
| ACAAGTATGACTCTGATTGA+AGG | - | chr3.4:93859993-93860012 | None:intergenic | 35.0% | |
| ACTTGAAGGATAAGAGCAAA+TGG | + | chr3.4:93858587-93858606 | MS.gene072966:CDS | 35.0% | |
| AGGGCCTATCTGAATTTAAT+GGG | - | chr3.4:93858548-93858567 | None:intergenic | 35.0% | |
| AGTAAGGAGAGTAGATTAGA+TGG | + | chr3.4:93857482-93857501 | MS.gene072966:intron | 35.0% | |
| ATAACAACCTTATCTTCAGG+AGG | + | chr3.4:93856879-93856898 | MS.gene072966:CDS | 35.0% | |
| CAAGTATGACTCTGATTGAA+GGG | - | chr3.4:93859992-93860011 | None:intergenic | 35.0% | |
| CAATGGTAAGTATTTCCTCT+TGG | + | chr3.4:93859702-93859721 | MS.gene072966:intron | 35.0% | |
| CACGTTTGCAATACTAAAGT+AGG | - | chr3.4:93859876-93859895 | None:intergenic | 35.0% | |
| CCAATAACAACCTTATCTTC+AGG | + | chr3.4:93856876-93856895 | MS.gene072966:CDS | 35.0% | |
| CCTGAAGATAAGGTTGTTAT+TGG | - | chr3.4:93856879-93856898 | None:intergenic | 35.0% | |
| CTGAAGAATCAGGAATTTAC+CGG | + | chr3.4:93859799-93859818 | MS.gene072966:CDS | 35.0% | |
| CTTCTTCTTCTTCTTCTAGA+AGG | + | chr3.4:93856987-93857006 | MS.gene072966:CDS | 35.0% | |
| CTTGAAGAAACAGTAGCTAT+CGG | - | chr3.4:93858737-93858756 | None:intergenic | 35.0% | |
| TAACAACCTTATCTTCAGGA+GGG | + | chr3.4:93856880-93856899 | MS.gene072966:CDS | 35.0% | |
| TATTGCTTGAAAGCTCTTGT+TGG | + | chr3.4:93859946-93859965 | MS.gene072966:intron | 35.0% | |
| TCTTCTCTCTACATGAAAGT+GGG | - | chr3.4:93857443-93857462 | None:intergenic | 35.0% | |
| TGAAGTTGTATTCTTTAGGC+AGG | + | chr3.4:93859224-93859243 | MS.gene072966:intron | 35.0% | |
| TTATAAGGTTTGCACTTGGA+GGG | - | chr3.4:93858567-93858586 | None:intergenic | 35.0% | |
| TTATTGGGAAGAATAAGAGC+TGG | - | chr3.4:93856863-93856882 | None:intergenic | 35.0% | |
| TTCTTACTGAGAACATGTGA+CGG | + | chr3.4:93860384-93860403 | MS.gene072966:intron | 35.0% | |
| TTGAAGAAACAGTAGCTATC+GGG | - | chr3.4:93858736-93858755 | None:intergenic | 35.0% | |
| TTGACACCCAAAAGCTAAAA+AGG | - | chr3.4:93859120-93859139 | None:intergenic | 35.0% | |
| TTGTATTCTTTAGGCAGGAT+TGG | + | chr3.4:93859229-93859248 | MS.gene072966:intron | 35.0% | |
| TTGTTAGAGATAGTGAAGTG+AGG | - | chr3.4:93857033-93857052 | None:intergenic | 35.0% | |
| TTTAGCTGACAAATCTTCAC+TGG | + | chr3.4:93858636-93858655 | MS.gene072966:CDS | 35.0% | |
| TTTATAAGGTTTGCACTTGG+AGG | - | chr3.4:93858568-93858587 | None:intergenic | 35.0% | |
| TTTATCATCGGATTGTTGGA+AGG | - | chr3.4:93856948-93856967 | None:intergenic | 35.0% | |
| TTTCATGTAGAGAGAAGAGT+AGG | + | chr3.4:93857445-93857464 | MS.gene072966:intron | 35.0% | |
| TTTGAGCACTTGTATATGCA+AGG | + | chr3.4:93859189-93859208 | MS.gene072966:intron | 35.0% | |
| ! | AAGTCTTATCCCATTAAGTG+TGG | - | chr3.4:93857617-93857636 | None:intergenic | 35.0% |
| ! | ATGCAACAAGTTTGAGATTG+AGG | - | chr3.4:93858477-93858496 | None:intergenic | 35.0% |
| ! | CTCTTTTATCATCGGATTGT+TGG | - | chr3.4:93856952-93856971 | None:intergenic | 35.0% |
| ! | GCTTTGTAGTTTCCTTTTTC+TGG | + | chr3.4:93858348-93858367 | MS.gene072966:intron | 35.0% |
| ! | GGAGGAACATAATTTTCTGT+AGG | - | chr3.4:93860735-93860754 | None:intergenic | 35.0% |
| ! | TATCTCTAATTGGGAAGCAT+AGG | + | chr3.4:93858810-93858829 | MS.gene072966:intron | 35.0% |
| ! | TGGATCTTTCCTTTTATCTC+TGG | - | chr3.4:93860017-93860036 | None:intergenic | 35.0% |
| !! | CCAAAAAAGAAGCCATTTTG+GGG | - | chr3.4:93857203-93857222 | None:intergenic | 35.0% |
| !!! | AACATGTGACGGTTCTTTTT+TGG | + | chr3.4:93860395-93860414 | MS.gene072966:intron | 35.0% |
| !!! | AGTCAAGCCTTTTTAGCTTT+TGG | + | chr3.4:93859110-93859129 | MS.gene072966:intron | 35.0% |
| !!! | CTCACAGTCTTTTCAAGTAA+AGG | - | chr3.4:93860693-93860712 | None:intergenic | 35.0% |
| !!! | GTCAAGCCTTTTTAGCTTTT+GGG | + | chr3.4:93859111-93859130 | MS.gene072966:intron | 35.0% |
| AAAACTTGCAGGCAACAAGA+GGG | - | chr3.4:93858029-93858048 | None:intergenic | 40.0% | |
| AAGGAGAGTAGATTAGATGG+AGG | + | chr3.4:93857485-93857504 | MS.gene072966:intron | 40.0% | |
| AATCTCCAGGGATCTTTGTA+TGG | - | chr3.4:93860756-93860775 | None:intergenic | 40.0% | |
| AATGCTTTGGCCATAGATGT+GGG | + | chr3.4:93857952-93857971 | MS.gene072966:intron | 40.0% | |
| ACAGACCAGAGAGTTAAGAA+TGG | + | chr3.4:93858961-93858980 | MS.gene072966:intron | 40.0% | |
| ACCTTTGTGACGTAAACAGT+TGG | - | chr3.4:93859258-93859277 | None:intergenic | 40.0% | |
| ACTTCAACAAGACCCCAAAA+TGG | + | chr3.4:93857188-93857207 | MS.gene072966:CDS | 40.0% | |
| AGATTGAGGAAATACCGTGA+CGG | - | chr3.4:93858463-93858482 | None:intergenic | 40.0% | |
| ATAAGAGCTGGATTGTTGGA+AGG | - | chr3.4:93856851-93856870 | None:intergenic | 40.0% | |
| ATTGTCTCCTCACAGATTGA+AGG | + | chr3.4:93859632-93859651 | MS.gene072966:intron | 40.0% | |
| CAATCTCATCATTTCCGTCA+CGG | + | chr3.4:93858446-93858465 | MS.gene072966:CDS | 40.0% | |
| CTACATGAAAGTGGGAAAAG+AGG | - | chr3.4:93857435-93857454 | None:intergenic | 40.0% | |
| CTCTTCTCTCTACATGAAAG+TGG | - | chr3.4:93857444-93857463 | None:intergenic | 40.0% | |
| CTGTTGAAGCAACATAATGC+CGG | - | chr3.4:93859821-93859840 | None:intergenic | 40.0% | |
| CTTATCCCATTAAGTGTGGT+CGG | - | chr3.4:93857613-93857632 | None:intergenic | 40.0% | |
| GAGGGCCTATCTGAATTTAA+TGG | - | chr3.4:93858549-93858568 | None:intergenic | 40.0% | |
| GATAAACTCTTGCCTTGCAA+AGG | - | chr3.4:93858162-93858181 | None:intergenic | 40.0% | |
| GCAAAGTCAGTCTCAATTGT+AGG | - | chr3.4:93857126-93857145 | None:intergenic | 40.0% | |
| GGATTTACACTACAGATCAC+AGG | - | chr3.4:93859287-93859306 | None:intergenic | 40.0% | |
| GGCAAGAGAGAAAACAAAAC+AGG | - | chr3.4:93857658-93857677 | None:intergenic | 40.0% | |
| GGCTTGTAGATTCTGTAGTA+AGG | + | chr3.4:93857466-93857485 | MS.gene072966:intron | 40.0% | |
| GTTGTACAGTCTGAAGAATC+AGG | + | chr3.4:93859789-93859808 | MS.gene072966:intron | 40.0% | |
| TAATGCTTTGGCCATAGATG+TGG | + | chr3.4:93857951-93857970 | MS.gene072966:intron | 40.0% | |
| TACTTTGGACTTGTGACTGA+TGG | + | chr3.4:93859767-93859786 | MS.gene072966:intron | 40.0% | |
| TATTCTGTCTTGTCTTGCAG+TGG | + | chr3.4:93857146-93857165 | MS.gene072966:intron | 40.0% | |
| TCCAACTGTTTACGTCACAA+AGG | + | chr3.4:93859254-93859273 | MS.gene072966:intron | 40.0% | |
| TTCTCTCTTGCCATCCAAAA+AGG | + | chr3.4:93857666-93857685 | MS.gene072966:intron | 40.0% | |
| ! | ACAAAGATCCCTGGAGATTT+TGG | + | chr3.4:93860757-93860776 | MS.gene072966:CDS | 40.0% |
| ! | ACAACATGCGTTCCTTTTTC+TGG | + | chr3.4:93857049-93857068 | MS.gene072966:CDS | 40.0% |
| ! | ATGGACTGCAAAAGATGTTG+TGG | + | chr3.4:93858606-93858625 | MS.gene072966:CDS | 40.0% |
| !! | AGAAGGGATTTTGTGCTGTT+AGG | + | chr3.4:93857004-93857023 | MS.gene072966:CDS | 40.0% |
| !! | TTTTAGAGGGAAGCTCAAGA+GGG | - | chr3.4:93857254-93857273 | None:intergenic | 40.0% |
| !! | TTTTTAGAGGGAAGCTCAAG+AGG | - | chr3.4:93857255-93857274 | None:intergenic | 40.0% |
| !!! | AGGAGCATTTGGTTTGGTTT+TGG | - | chr3.4:93856928-93856947 | None:intergenic | 40.0% |
| !!! | CCCCAAAATGGCTTCTTTTT+TGG | + | chr3.4:93857200-93857219 | MS.gene072966:CDS | 40.0% |
| !!! | TTTTTTCCACTGTGGACTGA+GGG | - | chr3.4:93860168-93860187 | None:intergenic | 40.0% |
| AAACTTGCAGGCAACAAGAG+GGG | - | chr3.4:93858028-93858047 | None:intergenic | 45.0% | |
| AATTCCTTGCAGCTAATGCG+CGG | + | chr3.4:93858388-93858407 | MS.gene072966:intron | 45.0% | |
| AGATTGAAGGCGAACCTTAC+TGG | + | chr3.4:93859645-93859664 | MS.gene072966:intron | 45.0% | |
| ATGTAGCCGACCACACTTAA+TGG | + | chr3.4:93857604-93857623 | MS.gene072966:intron | 45.0% | |
| CACTAGTGATCCCACATCTA+TGG | - | chr3.4:93857965-93857984 | None:intergenic | 45.0% | |
| CTCTCTCTCTCTCTCTCATA+TGG | + | chr3.4:93860209-93860228 | MS.gene072966:intron | 45.0% | |
| GAAAACTTGCAGGCAACAAG+AGG | - | chr3.4:93858030-93858049 | None:intergenic | 45.0% | |
| GCTTCAACAGCAGAAAGAGA+TGG | + | chr3.4:93859831-93859850 | MS.gene072966:CDS | 45.0% | |
| GGATTACCCTCCTGAAGATA+AGG | - | chr3.4:93856889-93856908 | None:intergenic | 45.0% | |
| TGACTCTGATTGAAGGGAAG+AGG | - | chr3.4:93859986-93860005 | None:intergenic | 45.0% | |
| TGCATCGAGAACTGAACTCT+CGG | - | chr3.4:93859371-93859390 | None:intergenic | 45.0% | |
| TGTAGCCGACCACACTTAAT+GGG | + | chr3.4:93857605-93857624 | MS.gene072966:intron | 45.0% | |
| TTCCTCCATACAAAGATCCC+TGG | + | chr3.4:93860748-93860767 | MS.gene072966:CDS | 45.0% | |
| ! | AGTAGCTATCGGGTATTGCT+CGG | - | chr3.4:93858726-93858745 | None:intergenic | 45.0% |
| !! | AGGGATTTTGTGCTGTTAGG+AGG | + | chr3.4:93857007-93857026 | MS.gene072966:CDS | 45.0% |
| !! | GGATTGTTGGAAGGAGCATT+TGG | - | chr3.4:93856939-93856958 | None:intergenic | 45.0% |
| !! | GTTGGAAGGAGCATTTGGTT+TGG | - | chr3.4:93856934-93856953 | None:intergenic | 45.0% |
| !!! | CTTTTTTCCACTGTGGACTG+AGG | - | chr3.4:93860169-93860188 | None:intergenic | 45.0% |
| !!! | GAGGGTACTTTTTTCCACTG+TGG | - | chr3.4:93860176-93860195 | None:intergenic | 45.0% |
| !! | AAAATAATAAATATTTGTAT+TGG | + | chr3.4:93860056-93860075 | MS.gene072966:intron | 5.0% |
| ACATGCTCACGTGTCTGTGT+TGG | - | chr3.4:93859439-93859458 | None:intergenic | 50.0% | |
| AGAGAGAGAGAGAGAGAGAG+AGG | - | chr3.4:93860193-93860212 | None:intergenic | 50.0% | |
| AGCTAGACGCAGTTGATCAG+TGG | - | chr3.4:93860324-93860343 | None:intergenic | 50.0% | |
| AGGTTCGCCTTCAATCTGTG+AGG | - | chr3.4:93859642-93859661 | None:intergenic | 50.0% | |
| CTCCAGGGATCTTTGTATGG+AGG | - | chr3.4:93860753-93860772 | None:intergenic | 50.0% | |
| GAGAGAGAGAGAGAGAGAGA+GGG | - | chr3.4:93860194-93860213 | None:intergenic | 50.0% | |
| GCAGCCGATGAATATCGTTC+TGG | - | chr3.4:93858111-93858130 | None:intergenic | 50.0% | |
| GGGCACCATTCTTAACTCTC+TGG | - | chr3.4:93858969-93858988 | None:intergenic | 50.0% | |
| GTTAAGAATGGTGCCCCACA+TGG | + | chr3.4:93858973-93858992 | MS.gene072966:intron | 50.0% | |
| TAGACGCAGTTGATCAGTGG+CGG | - | chr3.4:93860321-93860340 | None:intergenic | 50.0% | |
| ! | GTAGCTATCGGGTATTGCTC+GGG | - | chr3.4:93858725-93858744 | None:intergenic | 50.0% |
| ! | TAGCTATCGGGTATTGCTCG+GGG | - | chr3.4:93858724-93858743 | None:intergenic | 50.0% |
| !! | AGCTTGTTGCCCGCTTAAAC+TGG | + | chr3.4:93857700-93857719 | MS.gene072966:intron | 50.0% |
| TGCCATCCAAAAAGGCCCAG+CGG | + | chr3.4:93857674-93857693 | MS.gene072966:intron | 55.0% | |
| TGTCTTGCAGTGGCTCTTGC+TGG | + | chr3.4:93857156-93857175 | MS.gene072966:intron | 55.0% | |
| ! | ATCAGTGGCGGAGGAAATGC+TGG | - | chr3.4:93860309-93860328 | None:intergenic | 55.0% |
| ACGCAGTTGATCAGTGGCGG+AGG | - | chr3.4:93860318-93860337 | None:intergenic | 60.0% | |
| CTTCGACCCTCAGTCCACAG+TGG | + | chr3.4:93860159-93860178 | MS.gene072966:CDS | 60.0% | |
| !! | ACTGAGGGTCGAAGCGCTGA+TGG | - | chr3.4:93860153-93860172 | None:intergenic | 60.0% |
| GCAGCCGCGCATTAGCTGCA+AGG | - | chr3.4:93858395-93858414 | None:intergenic | 65.0% | |
| ! | CGCCGCTGGGCCTTTTTGGA+TGG | - | chr3.4:93857679-93857698 | None:intergenic | 65.0% |
| !! | CTCGGCTGAGCGCTGAACTG+AGG | - | chr3.4:93859353-93859372 | None:intergenic | 65.0% |
| GGGCAACAAGCTGCGCCGCT+GGG | - | chr3.4:93857692-93857711 | None:intergenic | 70.0% | |
| ! | GCTGCGCCGCTGGGCCTTTT+TGG | - | chr3.4:93857683-93857702 | None:intergenic | 70.0% |
| CGGGCAACAAGCTGCGCCGC+TGG | - | chr3.4:93857693-93857712 | None:intergenic | 75.0% |
| Chromosome | Type | Strat | End | Strand | Name |
|---|---|---|---|---|---|
| chr3.4 | gene | 93856821 | 93860782 | 93856821 | ID=MS.gene072966 |
| chr3.4 | mRNA | 93856821 | 93860782 | 93856821 | ID=MS.gene072966.t1;Parent=MS.gene072966 |
| chr3.4 | exon | 93856821 | 93857070 | 93856821 | ID=MS.gene072966.t1.exon1;Parent=MS.gene072966.t1 |
| chr3.4 | CDS | 93856821 | 93857070 | 93856821 | ID=cds.MS.gene072966.t1;Parent=MS.gene072966.t1 |
| chr3.4 | exon | 93857181 | 93857289 | 93857181 | ID=MS.gene072966.t1.exon2;Parent=MS.gene072966.t1 |
| chr3.4 | CDS | 93857181 | 93857289 | 93857181 | ID=cds.MS.gene072966.t1;Parent=MS.gene072966.t1 |
| chr3.4 | exon | 93858092 | 93858141 | 93858092 | ID=MS.gene072966.t1.exon3;Parent=MS.gene072966.t1 |
| chr3.4 | CDS | 93858092 | 93858141 | 93858092 | ID=cds.MS.gene072966.t1;Parent=MS.gene072966.t1 |
| chr3.4 | exon | 93858400 | 93858467 | 93858400 | ID=MS.gene072966.t1.exon4;Parent=MS.gene072966.t1 |
| chr3.4 | CDS | 93858400 | 93858467 | 93858400 | ID=cds.MS.gene072966.t1;Parent=MS.gene072966.t1 |
| chr3.4 | exon | 93858559 | 93858657 | 93858559 | ID=MS.gene072966.t1.exon5;Parent=MS.gene072966.t1 |
| chr3.4 | CDS | 93858559 | 93858657 | 93858559 | ID=cds.MS.gene072966.t1;Parent=MS.gene072966.t1 |
| chr3.4 | exon | 93859343 | 93859402 | 93859343 | ID=MS.gene072966.t1.exon6;Parent=MS.gene072966.t1 |
| chr3.4 | CDS | 93859343 | 93859402 | 93859343 | ID=cds.MS.gene072966.t1;Parent=MS.gene072966.t1 |
| chr3.4 | exon | 93859647 | 93859706 | 93859647 | ID=MS.gene072966.t1.exon7;Parent=MS.gene072966.t1 |
| chr3.4 | CDS | 93859647 | 93859706 | 93859647 | ID=cds.MS.gene072966.t1;Parent=MS.gene072966.t1 |
| chr3.4 | exon | 93859798 | 93859852 | 93859798 | ID=MS.gene072966.t1.exon8;Parent=MS.gene072966.t1 |
| chr3.4 | CDS | 93859798 | 93859852 | 93859798 | ID=cds.MS.gene072966.t1;Parent=MS.gene072966.t1 |
| chr3.4 | exon | 93860138 | 93860187 | 93860138 | ID=MS.gene072966.t1.exon9;Parent=MS.gene072966.t1 |
| chr3.4 | CDS | 93860138 | 93860187 | 93860138 | ID=cds.MS.gene072966.t1;Parent=MS.gene072966.t1 |
| chr3.4 | exon | 93860684 | 93860782 | 93860684 | ID=MS.gene072966.t1.exon10;Parent=MS.gene072966.t1 |
| chr3.4 | CDS | 93860684 | 93860782 | 93860684 | ID=cds.MS.gene072966.t1;Parent=MS.gene072966.t1 |
| Gene Sequence |
| Protein sequence |
