Alfalfa Gene Editing Database
Alfalfa Gene Editing Database
Nr:
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene76628.t1 | GAU44598.1 | 95.3 | 64 | 3 | 0 | 27 | 90 | 132 | 195 | 1.30E-24 | 122.1 |
Swissprot:
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene76628.t1 | Q9XI73 | 56.7 | 90 | 30 | 2 | 1 | 90 | 110 | 190 | 9.3e-19 | 94.0 |
Trembl:
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene76628.t1 | A0A2Z6NJA3 | 95.3 | 64 | 3 | 0 | 27 | 90 | 132 | 195 | 9.6e-25 | 122.1 |
TFs/TRs:
| Gene ID | Type | Classification |
|---|
Protein Kinases:
| Gene ID | Type | Classification |
|---|
Network:
Co-expression Network:
| Gene1 | Gene2 | correlation coefficient | p_value | FDR |
|---|---|---|---|---|
| MS.gene049137 | MS.gene76628 | 0.809634 | 1.72E-50 | -1.69E-46 |
| MS.gene049171 | MS.gene76628 | 0.863408 | 2.54E-64 | -1.69E-46 |
| MS.gene049173 | MS.gene76628 | 0.823977 | 1.04E-53 | -1.69E-46 |
| MS.gene049217 | MS.gene76628 | 0.897918 | 8.82E-77 | -1.69E-46 |
| MS.gene049222 | MS.gene76628 | 0.896417 | 3.76E-76 | -1.69E-46 |
| MS.gene049232 | MS.gene76628 | 0.82893 | 6.84E-55 | -1.69E-46 |
| MS.gene049265 | MS.gene76628 | -0.800941 | 1.14E-48 | -1.69E-46 |
| MS.gene049285 | MS.gene76628 | 0.91106 | 9.32E-83 | -1.69E-46 |
| MS.gene049320 | MS.gene76628 | 0.903468 | 3.36E-79 | -1.69E-46 |
| MS.gene049369 | MS.gene76628 | 0.819158 | 1.35E-52 | -1.69E-46 |
| MS.gene049425 | MS.gene76628 | -0.832422 | 9.54E-56 | -1.69E-46 |
| MS.gene049427 | MS.gene76628 | 0.832935 | 7.12E-56 | -1.69E-46 |
| MS.gene049609 | MS.gene76628 | 0.883597 | 3.92E-71 | -1.69E-46 |
| MS.gene049611 | MS.gene76628 | -0.824583 | 7.46E-54 | -1.69E-46 |
| MS.gene049614 | MS.gene76628 | 0.824842 | 6.48E-54 | -1.69E-46 |
| MS.gene049627 | MS.gene76628 | 0.815398 | 9.44E-52 | -1.69E-46 |
| MS.gene049633 | MS.gene76628 | 0.84893 | 4.48E-60 | -1.69E-46 |
| MS.gene049634 | MS.gene76628 | -0.825413 | 4.75E-54 | -1.69E-46 |
| MS.gene049805 | MS.gene76628 | 0.871944 | 4.64E-67 | -1.69E-46 |
| MS.gene049828 | MS.gene76628 | 0.800536 | 1.38E-48 | -1.69E-46 |
| MS.gene050083 | MS.gene76628 | -0.807066 | 6.06E-50 | -1.69E-46 |
| MS.gene05010 | MS.gene76628 | 0.865788 | 4.58E-65 | -1.69E-46 |
| MS.gene050163 | MS.gene76628 | 0.88954 | 2.21E-73 | -1.69E-46 |
| MS.gene050165 | MS.gene76628 | 0.885707 | 6.44E-72 | -1.69E-46 |
| MS.gene050216 | MS.gene76628 | 0.834175 | 3.49E-56 | -1.69E-46 |
| MS.gene050323 | MS.gene76628 | 0.826546 | 2.56E-54 | -1.69E-46 |
| MS.gene050333 | MS.gene76628 | 0.893305 | 7.11E-75 | -1.69E-46 |
| MS.gene050353 | MS.gene76628 | -0.823433 | 1.39E-53 | -1.69E-46 |
| MS.gene050381 | MS.gene76628 | -0.810123 | 1.35E-50 | -1.69E-46 |
| MS.gene050432 | MS.gene76628 | 0.828748 | 7.57E-55 | -1.69E-46 |
| MS.gene050444 | MS.gene76628 | 0.861617 | 9.05E-64 | -1.69E-46 |
| MS.gene050475 | MS.gene76628 | -0.80948 | 1.85E-50 | -1.69E-46 |
| MS.gene050496 | MS.gene76628 | 0.816284 | 5.99E-52 | -1.69E-46 |
| MS.gene050504 | MS.gene76628 | 0.880895 | 3.76E-70 | -1.69E-46 |
| MS.gene050518 | MS.gene76628 | 0.873323 | 1.61E-67 | -1.69E-46 |
| MS.gene050520 | MS.gene76628 | 0.820603 | 6.29E-53 | -1.69E-46 |
| MS.gene050538 | MS.gene76628 | 0.841911 | 3.56E-58 | -1.69E-46 |
| MS.gene050541 | MS.gene76628 | -0.804941 | 1.70E-49 | -1.69E-46 |
| MS.gene050577 | MS.gene76628 | 0.804197 | 2.42E-49 | -1.69E-46 |
| MS.gene050593 | MS.gene76628 | 0.867798 | 1.05E-65 | -1.69E-46 |
| MS.gene050612 | MS.gene76628 | 0.897565 | 1.24E-76 | -1.69E-46 |
| MS.gene050662 | MS.gene76628 | 0.835493 | 1.62E-56 | -1.69E-46 |
| MS.gene050675 | MS.gene76628 | 0.877248 | 7.32E-69 | -1.69E-46 |
| MS.gene050686 | MS.gene76628 | 0.829592 | 4.72E-55 | -1.69E-46 |
| MS.gene050699 | MS.gene76628 | 0.872615 | 2.78E-67 | -1.69E-46 |
| MS.gene050747 | MS.gene76628 | 0.858204 | 9.67E-63 | -1.69E-46 |
| MS.gene050767 | MS.gene76628 | 0.853402 | 2.45E-61 | -1.69E-46 |
| MS.gene050770 | MS.gene76628 | 0.855829 | 4.85E-62 | -1.69E-46 |
| MS.gene050772 | MS.gene76628 | 0.916772 | 1.19E-85 | -1.69E-46 |
| MS.gene05079 | MS.gene76628 | -0.841354 | 5.00E-58 | -1.69E-46 |
| MS.gene050809 | MS.gene76628 | -0.816595 | 5.10E-52 | -1.69E-46 |
| MS.gene05080 | MS.gene76628 | 0.858855 | 6.19E-63 | -1.69E-46 |
| MS.gene05081 | MS.gene76628 | 0.827974 | 1.16E-54 | -1.69E-46 |
| MS.gene050868 | MS.gene76628 | 0.860467 | 2.02E-63 | -1.69E-46 |
| MS.gene050871 | MS.gene76628 | 0.857938 | 1.16E-62 | -1.69E-46 |
| MS.gene050876 | MS.gene76628 | 0.811591 | 6.48E-51 | -1.69E-46 |
| MS.gene050950 | MS.gene76628 | 0.859012 | 5.55E-63 | -1.69E-46 |
| MS.gene050986 | MS.gene76628 | 0.86044 | 2.06E-63 | -1.69E-46 |
| MS.gene05100 | MS.gene76628 | 0.847242 | 1.31E-59 | -1.69E-46 |
| MS.gene05104 | MS.gene76628 | -0.827018 | 1.97E-54 | -1.69E-46 |
| MS.gene05105 | MS.gene76628 | 0.83972 | 1.34E-57 | -1.69E-46 |
| MS.gene051113 | MS.gene76628 | -0.80415 | 2.48E-49 | -1.69E-46 |
| MS.gene051127 | MS.gene76628 | -0.801772 | 7.69E-49 | -1.69E-46 |
| MS.gene051138 | MS.gene76628 | -0.804925 | 1.71E-49 | -1.69E-46 |
| MS.gene051167 | MS.gene76628 | -0.805027 | 1.63E-49 | -1.69E-46 |
| MS.gene051228 | MS.gene76628 | 0.891871 | 2.67E-74 | -1.69E-46 |
| MS.gene051268 | MS.gene76628 | 0.808182 | 3.51E-50 | -1.69E-46 |
| MS.gene051317 | MS.gene76628 | 0.815754 | 7.86E-52 | -1.69E-46 |
| MS.gene051364 | MS.gene76628 | -0.80437 | 2.23E-49 | -1.69E-46 |
| MS.gene051366 | MS.gene76628 | -0.819792 | 9.64E-53 | -1.69E-46 |
| MS.gene051387 | MS.gene76628 | 0.837565 | 4.82E-57 | -1.69E-46 |
| MS.gene051434 | MS.gene76628 | 0.843784 | 1.13E-58 | -1.69E-46 |
| MS.gene051551 | MS.gene76628 | 0.841537 | 4.47E-58 | -1.69E-46 |
| MS.gene051617 | MS.gene76628 | 0.84615 | 2.60E-59 | -1.69E-46 |
| MS.gene051632 | MS.gene76628 | -0.801579 | 8.43E-49 | -1.69E-46 |
| MS.gene051666 | MS.gene76628 | 0.859085 | 5.28E-63 | -1.69E-46 |
| MS.gene051692 | MS.gene76628 | 0.812277 | 4.60E-51 | -1.69E-46 |
| MS.gene051694 | MS.gene76628 | 0.870987 | 9.63E-67 | -1.69E-46 |
| MS.gene051810 | MS.gene76628 | 0.910716 | 1.37E-82 | -1.69E-46 |
| MS.gene051838 | MS.gene76628 | 0.827977 | 1.16E-54 | -1.69E-46 |
| MS.gene051858 | MS.gene76628 | 0.899992 | 1.14E-77 | -1.69E-46 |
| MS.gene051874 | MS.gene76628 | 0.828354 | 9.42E-55 | -1.69E-46 |
| MS.gene051949 | MS.gene76628 | 0.88007 | 7.43E-70 | -1.69E-46 |
| MS.gene052164 | MS.gene76628 | 0.820045 | 8.44E-53 | -1.69E-46 |
| MS.gene052271 | MS.gene76628 | 0.884994 | 1.19E-71 | -1.69E-46 |
| MS.gene052290 | MS.gene76628 | 0.84765 | 1.01E-59 | -1.69E-46 |
| MS.gene052379 | MS.gene76628 | 0.916724 | 1.26E-85 | -1.69E-46 |
| MS.gene052421 | MS.gene76628 | 0.819 | 1.46E-52 | -1.69E-46 |
| MS.gene052482 | MS.gene76628 | 0.802905 | 4.49E-49 | -1.69E-46 |
| MS.gene052484 | MS.gene76628 | 0.855124 | 7.79E-62 | -1.69E-46 |
| MS.gene052486 | MS.gene76628 | 0.812573 | 3.96E-51 | -1.69E-46 |
| MS.gene052503 | MS.gene76628 | 0.808134 | 3.60E-50 | -1.69E-46 |
| MS.gene052504 | MS.gene76628 | 0.804215 | 2.40E-49 | -1.69E-46 |
| MS.gene052506 | MS.gene76628 | 0.828831 | 7.22E-55 | -1.69E-46 |
| MS.gene052510 | MS.gene76628 | 0.809712 | 1.65E-50 | -1.69E-46 |
| MS.gene052605 | MS.gene76628 | 0.800299 | 1.54E-48 | -1.69E-46 |
| MS.gene052615 | MS.gene76628 | 0.882098 | 1.38E-70 | -1.69E-46 |
| MS.gene052670 | MS.gene76628 | 0.800417 | 1.46E-48 | -1.69E-46 |
| MS.gene052805 | MS.gene76628 | -0.830033 | 3.69E-55 | -1.69E-46 |
| MS.gene052822 | MS.gene76628 | 0.846696 | 1.85E-59 | -1.69E-46 |
| MS.gene052870 | MS.gene76628 | 0.885184 | 1.01E-71 | -1.69E-46 |
| MS.gene052872 | MS.gene76628 | 0.888212 | 7.21E-73 | -1.69E-46 |
| MS.gene052916 | MS.gene76628 | 0.873358 | 1.56E-67 | -1.69E-46 |
| MS.gene052966 | MS.gene76628 | 0.844332 | 8.07E-59 | -1.69E-46 |
| MS.gene053009 | MS.gene76628 | 0.85499 | 8.52E-62 | -1.69E-46 |
| MS.gene053018 | MS.gene76628 | 0.80853 | 2.96E-50 | -1.69E-46 |
| MS.gene053103 | MS.gene76628 | 0.835754 | 1.40E-56 | -1.69E-46 |
| MS.gene053104 | MS.gene76628 | 0.883846 | 3.17E-71 | -1.69E-46 |
| MS.gene053107 | MS.gene76628 | 0.830614 | 2.66E-55 | -1.69E-46 |
| MS.gene053203 | MS.gene76628 | 0.826608 | 2.47E-54 | -1.69E-46 |
| MS.gene053207 | MS.gene76628 | 0.884797 | 1.41E-71 | -1.69E-46 |
| MS.gene053209 | MS.gene76628 | 0.809691 | 1.67E-50 | -1.69E-46 |
| MS.gene053213 | MS.gene76628 | 0.903689 | 2.68E-79 | -1.69E-46 |
| MS.gene053286 | MS.gene76628 | 0.897417 | 1.43E-76 | -1.69E-46 |
| MS.gene053322 | MS.gene76628 | 0.894487 | 2.35E-75 | -1.69E-46 |
| MS.gene053384 | MS.gene76628 | 0.837505 | 5.00E-57 | -1.69E-46 |
| MS.gene053420 | MS.gene76628 | -0.829103 | 6.21E-55 | -1.69E-46 |
| MS.gene053436 | MS.gene76628 | 0.819659 | 1.03E-52 | -1.69E-46 |
| MS.gene053449 | MS.gene76628 | 0.833564 | 4.96E-56 | -1.69E-46 |
| MS.gene053479 | MS.gene76628 | 0.84369 | 1.20E-58 | -1.69E-46 |
| MS.gene053488 | MS.gene76628 | -0.809726 | 1.64E-50 | -1.69E-46 |
| MS.gene053561 | MS.gene76628 | -0.85715 | 1.98E-62 | -1.69E-46 |
| MS.gene053574 | MS.gene76628 | 0.871708 | 5.56E-67 | -1.69E-46 |
| MS.gene053632 | MS.gene76628 | 0.879876 | 8.71E-70 | -1.69E-46 |
| MS.gene053813 | MS.gene76628 | 0.814337 | 1.62E-51 | -1.69E-46 |
| MS.gene053824 | MS.gene76628 | 0.872714 | 2.57E-67 | -1.69E-46 |
| MS.gene053915 | MS.gene76628 | 0.812836 | 3.47E-51 | -1.69E-46 |
| MS.gene053916 | MS.gene76628 | 0.886433 | 3.44E-72 | -1.69E-46 |
| MS.gene054003 | MS.gene76628 | 0.816223 | 6.18E-52 | -1.69E-46 |
| MS.gene054376 | MS.gene76628 | 0.828645 | 8.01E-55 | -1.69E-46 |
| MS.gene054408 | MS.gene76628 | 0.833104 | 6.46E-56 | -1.69E-46 |
| MS.gene054543 | MS.gene76628 | 0.820984 | 5.14E-53 | -1.69E-46 |
| MS.gene054595 | MS.gene76628 | 0.843714 | 1.18E-58 | -1.69E-46 |
| MS.gene054600 | MS.gene76628 | 0.883604 | 3.90E-71 | -1.69E-46 |
| MS.gene054616 | MS.gene76628 | -0.830868 | 2.30E-55 | -1.69E-46 |
| MS.gene054642 | MS.gene76628 | 0.921629 | 2.80E-88 | -1.69E-46 |
| MS.gene054706 | MS.gene76628 | -0.806921 | 6.50E-50 | -1.69E-46 |
| MS.gene054708 | MS.gene76628 | -0.808758 | 2.65E-50 | -1.69E-46 |
| MS.gene054802 | MS.gene76628 | 0.841838 | 3.73E-58 | -1.69E-46 |
| MS.gene054803 | MS.gene76628 | 0.835896 | 1.28E-56 | -1.69E-46 |
| MS.gene054804 | MS.gene76628 | 0.842216 | 2.96E-58 | -1.69E-46 |
| MS.gene054927 | MS.gene76628 | 0.802638 | 5.10E-49 | -1.69E-46 |
| MS.gene05494 | MS.gene76628 | 0.847976 | 8.22E-60 | -1.69E-46 |
| MS.gene054954 | MS.gene76628 | 0.878443 | 2.80E-69 | -1.69E-46 |
| MS.gene054959 | MS.gene76628 | -0.808885 | 2.49E-50 | -1.69E-46 |
| MS.gene05505 | MS.gene76628 | 0.880032 | 7.66E-70 | -1.69E-46 |
| MS.gene055111 | MS.gene76628 | -0.828959 | 6.73E-55 | -1.69E-46 |
| MS.gene055154 | MS.gene76628 | -0.840006 | 1.13E-57 | -1.69E-46 |
| MS.gene055206 | MS.gene76628 | 0.898468 | 5.15E-77 | -1.69E-46 |
| MS.gene055212 | MS.gene76628 | 0.847142 | 1.39E-59 | -1.69E-46 |
| MS.gene055224 | MS.gene76628 | 0.854194 | 1.45E-61 | -1.69E-46 |
| MS.gene055254 | MS.gene76628 | 0.817238 | 3.66E-52 | -1.69E-46 |
| MS.gene055277 | MS.gene76628 | 0.80302 | 4.26E-49 | -1.69E-46 |
| MS.gene055289 | MS.gene76628 | 0.858429 | 8.29E-63 | -1.69E-46 |
| MS.gene055362 | MS.gene76628 | 0.893601 | 5.40E-75 | -1.69E-46 |
| MS.gene055397 | MS.gene76628 | 0.854816 | 9.56E-62 | -1.69E-46 |
| MS.gene055499 | MS.gene76628 | 0.870246 | 1.69E-66 | -1.69E-46 |
| MS.gene055502 | MS.gene76628 | 0.897604 | 1.20E-76 | -1.69E-46 |
| MS.gene055536 | MS.gene76628 | -0.801533 | 8.61E-49 | -1.69E-46 |
| MS.gene055577 | MS.gene76628 | 0.899349 | 2.16E-77 | -1.69E-46 |
| MS.gene055634 | MS.gene76628 | 0.812028 | 5.21E-51 | -1.69E-46 |
| MS.gene055636 | MS.gene76628 | 0.873945 | 9.92E-68 | -1.69E-46 |
| MS.gene055638 | MS.gene76628 | 0.880378 | 5.77E-70 | -1.69E-46 |
| MS.gene055647 | MS.gene76628 | 0.858054 | 1.07E-62 | -1.69E-46 |
| MS.gene055722 | MS.gene76628 | 0.886174 | 4.30E-72 | -1.69E-46 |
| MS.gene055748 | MS.gene76628 | 0.837786 | 4.23E-57 | -1.69E-46 |
| MS.gene055750 | MS.gene76628 | 0.833785 | 4.37E-56 | -1.69E-46 |
| MS.gene055751 | MS.gene76628 | 0.839854 | 1.24E-57 | -1.69E-46 |
| MS.gene055776 | MS.gene76628 | 0.812359 | 4.41E-51 | -1.69E-46 |
| MS.gene05589 | MS.gene76628 | 0.80226 | 6.11E-49 | -1.69E-46 |
| MS.gene05592 | MS.gene76628 | 0.928912 | 1.47E-92 | -1.69E-46 |
| MS.gene055941 | MS.gene76628 | 0.892926 | 1.01E-74 | -1.69E-46 |
| MS.gene055956 | MS.gene76628 | -0.843763 | 1.15E-58 | -1.69E-46 |
| MS.gene056083 | MS.gene76628 | 0.858641 | 7.16E-63 | -1.69E-46 |
| MS.gene056374 | MS.gene76628 | 0.888004 | 8.67E-73 | -1.69E-46 |
| MS.gene056409 | MS.gene76628 | 0.807976 | 3.89E-50 | -1.69E-46 |
| MS.gene056410 | MS.gene76628 | 0.825935 | 3.57E-54 | -1.69E-46 |
| MS.gene056422 | MS.gene76628 | 0.812213 | 4.75E-51 | -1.69E-46 |
| MS.gene056448 | MS.gene76628 | 0.84799 | 8.15E-60 | -1.69E-46 |
| MS.gene056449 | MS.gene76628 | 0.825089 | 5.67E-54 | -1.69E-46 |
| MS.gene056487 | MS.gene76628 | 0.827754 | 1.31E-54 | -1.69E-46 |
| MS.gene056504 | MS.gene76628 | 0.84757 | 1.06E-59 | -1.69E-46 |
| MS.gene056510 | MS.gene76628 | 0.857616 | 1.45E-62 | -1.69E-46 |
| MS.gene056511 | MS.gene76628 | 0.816624 | 5.02E-52 | -1.69E-46 |
| MS.gene056549 | MS.gene76628 | 0.842712 | 2.19E-58 | -1.69E-46 |
| MS.gene056609 | MS.gene76628 | 0.819049 | 1.42E-52 | -1.69E-46 |
| MS.gene056610 | MS.gene76628 | 0.807119 | 5.90E-50 | -1.69E-46 |
| MS.gene056657 | MS.gene76628 | 0.906754 | 1.06E-80 | -1.69E-46 |
| MS.gene056692 | MS.gene76628 | 0.853712 | 1.99E-61 | -1.69E-46 |
| MS.gene056856 | MS.gene76628 | -0.804131 | 2.50E-49 | -1.69E-46 |
| MS.gene056897 | MS.gene76628 | 0.842002 | 3.37E-58 | -1.69E-46 |
| MS.gene056898 | MS.gene76628 | 0.829259 | 5.69E-55 | -1.69E-46 |
| MS.gene056903 | MS.gene76628 | 0.807088 | 6.00E-50 | -1.69E-46 |
| MS.gene056946 | MS.gene76628 | 0.822537 | 2.25E-53 | -1.69E-46 |
| MS.gene056947 | MS.gene76628 | 0.837843 | 4.09E-57 | -1.69E-46 |
| MS.gene057011 | MS.gene76628 | 0.845982 | 2.89E-59 | -1.69E-46 |
| MS.gene057076 | MS.gene76628 | 0.868227 | 7.64E-66 | -1.69E-46 |
| MS.gene057129 | MS.gene76628 | 0.893453 | 6.20E-75 | -1.69E-46 |
| MS.gene057146 | MS.gene76628 | 0.839862 | 1.23E-57 | -1.69E-46 |
| MS.gene057246 | MS.gene76628 | 0.813059 | 3.10E-51 | -1.69E-46 |
| MS.gene057331 | MS.gene76628 | 0.891592 | 3.45E-74 | -1.69E-46 |
| MS.gene05735 | MS.gene76628 | 0.814372 | 1.59E-51 | -1.69E-46 |
| MS.gene057416 | MS.gene76628 | 0.894225 | 3.01E-75 | -1.69E-46 |
| MS.gene057658 | MS.gene76628 | 0.819203 | 1.31E-52 | -1.69E-46 |
| MS.gene057734 | MS.gene76628 | 0.811041 | 8.54E-51 | -1.69E-46 |
| MS.gene057831 | MS.gene76628 | 0.842296 | 2.82E-58 | -1.69E-46 |
| MS.gene057856 | MS.gene76628 | 0.806453 | 8.17E-50 | -1.69E-46 |
| MS.gene057857 | MS.gene76628 | 0.828949 | 6.76E-55 | -1.69E-46 |
| MS.gene057926 | MS.gene76628 | 0.888655 | 4.87E-73 | -1.69E-46 |
| MS.gene058006 | MS.gene76628 | 0.866446 | 2.84E-65 | -1.69E-46 |
| MS.gene058019 | MS.gene76628 | 0.83279 | 7.73E-56 | -1.69E-46 |
| MS.gene058130 | MS.gene76628 | 0.859205 | 4.86E-63 | -1.69E-46 |
| MS.gene058293 | MS.gene76628 | 0.815132 | 1.08E-51 | -1.69E-46 |
| MS.gene058323 | MS.gene76628 | 0.891304 | 4.49E-74 | -1.69E-46 |
| MS.gene058338 | MS.gene76628 | 0.851285 | 9.80E-61 | -1.69E-46 |
| MS.gene05837 | MS.gene76628 | 0.867273 | 1.55E-65 | -1.69E-46 |
| MS.gene058419 | MS.gene76628 | 0.902309 | 1.11E-78 | -1.69E-46 |
| MS.gene058544 | MS.gene76628 | 0.859736 | 3.37E-63 | -1.69E-46 |
| MS.gene058588 | MS.gene76628 | 0.824047 | 9.97E-54 | -1.69E-46 |
| MS.gene058603 | MS.gene76628 | -0.800727 | 1.26E-48 | -1.69E-46 |
| MS.gene058660 | MS.gene76628 | 0.810698 | 1.01E-50 | -1.69E-46 |
| MS.gene058723 | MS.gene76628 | 0.892612 | 1.35E-74 | -1.69E-46 |
| MS.gene058773 | MS.gene76628 | 0.906145 | 2.03E-80 | -1.69E-46 |
| MS.gene058838 | MS.gene76628 | 0.842478 | 2.52E-58 | -1.69E-46 |
| MS.gene05883 | MS.gene76628 | 0.818715 | 1.70E-52 | -1.69E-46 |
| MS.gene058840 | MS.gene76628 | -0.845111 | 4.98E-59 | -1.69E-46 |
| MS.gene059022 | MS.gene76628 | 0.890905 | 6.45E-74 | -1.69E-46 |
| MS.gene059023 | MS.gene76628 | 0.880169 | 6.85E-70 | -1.69E-46 |
| MS.gene059029 | MS.gene76628 | 0.90955 | 5.03E-82 | -1.69E-46 |
| MS.gene059079 | MS.gene76628 | 0.81762 | 3.00E-52 | -1.69E-46 |
| MS.gene05913 | MS.gene76628 | 0.871688 | 5.65E-67 | -1.69E-46 |
| MS.gene059305 | MS.gene76628 | 0.831909 | 1.28E-55 | -1.69E-46 |
| MS.gene05934 | MS.gene76628 | 0.872973 | 2.11E-67 | -1.69E-46 |
| MS.gene059367 | MS.gene76628 | 0.818521 | 1.88E-52 | -1.69E-46 |
| MS.gene059536 | MS.gene76628 | 0.867884 | 9.85E-66 | -1.69E-46 |
| MS.gene059677 | MS.gene76628 | 0.901074 | 3.87E-78 | -1.69E-46 |
| MS.gene059699 | MS.gene76628 | -0.810595 | 1.07E-50 | -1.69E-46 |
| MS.gene059711 | MS.gene76628 | 0.826852 | 2.16E-54 | -1.69E-46 |
| MS.gene059718 | MS.gene76628 | 0.905065 | 6.36E-80 | -1.69E-46 |
| MS.gene059756 | MS.gene76628 | 0.828478 | 8.79E-55 | -1.69E-46 |
| MS.gene059801 | MS.gene76628 | 0.834629 | 2.68E-56 | -1.69E-46 |
| MS.gene059865 | MS.gene76628 | 0.854506 | 1.18E-61 | -1.69E-46 |
| MS.gene059902 | MS.gene76628 | 0.899806 | 1.38E-77 | -1.69E-46 |
| MS.gene059960 | MS.gene76628 | 0.876112 | 1.81E-68 | -1.69E-46 |
| MS.gene060193 | MS.gene76628 | 0.852756 | 3.75E-61 | -1.69E-46 |
| MS.gene060341 | MS.gene76628 | 0.809385 | 1.94E-50 | -1.69E-46 |
| MS.gene06046 | MS.gene76628 | 0.826283 | 2.95E-54 | -1.69E-46 |
| MS.gene060482 | MS.gene76628 | 0.845712 | 3.42E-59 | -1.69E-46 |
| MS.gene060703 | MS.gene76628 | 0.850733 | 1.40E-60 | -1.69E-46 |
| MS.gene060728 | MS.gene76628 | 0.83777 | 4.27E-57 | -1.69E-46 |
| MS.gene06074 | MS.gene76628 | -0.832796 | 7.70E-56 | -1.69E-46 |
| MS.gene060762 | MS.gene76628 | 0.874546 | 6.21E-68 | -1.69E-46 |
| MS.gene060778 | MS.gene76628 | 0.806227 | 9.11E-50 | -1.69E-46 |
| MS.gene06077 | MS.gene76628 | 0.852745 | 3.77E-61 | -1.69E-46 |
| MS.gene060804 | MS.gene76628 | 0.899112 | 2.74E-77 | -1.69E-46 |
| MS.gene060818 | MS.gene76628 | 0.876684 | 1.15E-68 | -1.69E-46 |
| MS.gene060835 | MS.gene76628 | 0.852991 | 3.21E-61 | -1.69E-46 |
| MS.gene060837 | MS.gene76628 | 0.848964 | 4.38E-60 | -1.69E-46 |
| MS.gene06092 | MS.gene76628 | 0.884411 | 1.96E-71 | -1.69E-46 |
| MS.gene060982 | MS.gene76628 | 0.833325 | 5.69E-56 | -1.69E-46 |
| MS.gene061041 | MS.gene76628 | 0.86338 | 2.59E-64 | -1.69E-46 |
| MS.gene061134 | MS.gene76628 | 0.849228 | 3.70E-60 | -1.69E-46 |
| MS.gene061150 | MS.gene76628 | 0.874453 | 6.67E-68 | -1.69E-46 |
| MS.gene061171 | MS.gene76628 | 0.805491 | 1.30E-49 | -1.69E-46 |
| MS.gene061200 | MS.gene76628 | 0.896097 | 5.11E-76 | -1.69E-46 |
PPI:
| Gene1 | Gene2 | Type |
|---|
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene76628.t1 | MTR_5g041910 | 95.312 | 64 | 3 | 0 | 27 | 90 | 198 | 261 | 1.57e-37 | 126 |
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene76628.t1 | AT1G14150 | 56.667 | 90 | 30 | 2 | 1 | 90 | 110 | 190 | 2.42e-27 | 98.6 |
Find 12 sgRNAs with CRISPR-Local
Find 105 sgRNAs with CRISPR-GE
CRISPR-Local
| sgRNA_sequence | on_target_score | Position | Region |
|---|---|---|---|
| TCAATGTCTTCTCGTAGTAT+AGG | 0.434954 | 5.1:+31556512 | None:intergenic |
| ATTCATATACCTTTGGTGTC+CGG | 0.448494 | 5.1:+31556539 | None:intergenic |
| TACCAGCATAGCAGGTCAGC+AGG | 0.454532 | 5.1:-31558422 | MS.gene76628:intron |
| AGGTATGATTCATATACCTT+TGG | 0.468647 | 5.1:+31556532 | None:intergenic |
| TGTGAGTATACCAGCATAGC+AGG | 0.495736 | 5.1:-31558430 | MS.gene76628:CDS |
| TACCTGCTGACCTGCTATGC+TGG | 0.514831 | 5.1:+31558420 | None:intergenic |
| TTCAGATGGATCGTTATGTC+CGG | 0.516551 | 5.1:-31556558 | MS.gene76628:intron |
| GAAATCAATAGATGAACTTG+TGG | 0.590899 | 5.1:-31556491 | MS.gene76628:CDS |
| TGTTAAAACTGCTAATGAGT+TGG | 0.596114 | 5.1:-31557445 | MS.gene76628:CDS |
| TCGTTATGTCCGGACACCAA+AGG | 0.636412 | 5.1:-31556548 | MS.gene76628:CDS |
| TTTGCCTGAAAATCGTCGCA+AGG | 0.639622 | 5.1:-31557472 | MS.gene76628:CDS |
| GTTGGTTGATAACTTGACTG+AGG | 0.748637 | 5.1:-31557427 | MS.gene76628:intron |
CRISPR-GE
| badsite warning | sgRNA_sequence | Strand | Position | Region | GC_content |
|---|---|---|---|---|---|
| !! | GAAAAAAATGTAAATATTTA+TGG | + | chr5.1:31556823-31556842 | None:intergenic | 10.0% |
| !! | TGAAATTGTTAATGAATATA+AGG | - | chr5.1:31558198-31558217 | MS.gene76628:intron | 15.0% |
| !! | TTAAATGTAATTATATGTGT+CGG | - | chr5.1:31558100-31558119 | MS.gene76628:intron | 15.0% |
| !! | TTGAAGTTGAATAAAAAAAA+TGG | - | chr5.1:31556504-31556523 | MS.gene76628:CDS | 15.0% |
| !!! | AAAATTAAGCATTTTCTTTT+TGG | + | chr5.1:31556847-31556866 | None:intergenic | 15.0% |
| !!! | TCTATAGTTGAATTTTTTTA+AGG | + | chr5.1:31557824-31557843 | None:intergenic | 15.0% |
| !!! | TTTTAAAAAAATTGATGATG+TGG | - | chr5.1:31556569-31556588 | MS.gene76628:intron | 15.0% |
| !! | AATGTAAATATTTATGGTAG+TGG | + | chr5.1:31556817-31556836 | None:intergenic | 20.0% |
| !! | ATAAGATACATAATCTTTCA+AGG | + | chr5.1:31558357-31558376 | None:intergenic | 20.0% |
| !! | ATGTAAATATTTATGGTAGT+GGG | + | chr5.1:31556816-31556835 | None:intergenic | 20.0% |
| !! | TAAGATACATAATCTTTCAA+GGG | + | chr5.1:31558356-31558375 | None:intergenic | 20.0% |
| !! | TCATAAGATAATTTAGTCAT+TGG | - | chr5.1:31557672-31557691 | MS.gene76628:intron | 20.0% |
| !!! | ATTTTTTGTGTGGATATTTT+TGG | + | chr5.1:31557059-31557078 | None:intergenic | 20.0% |
| !!! | TGCATTTTTAGTATATGATT+AGG | - | chr5.1:31558254-31558273 | MS.gene76628:intron | 20.0% |
| ! | AAATGTTGGAAACTTTATCT+TGG | - | chr5.1:31557395-31557414 | MS.gene76628:intron | 25.0% |
| ! | AAGATACATAATCTTTCAAG+GGG | + | chr5.1:31558355-31558374 | None:intergenic | 25.0% |
| ! | AATATAAGGTACAATACAAG+AGG | - | chr5.1:31558212-31558231 | MS.gene76628:intron | 25.0% |
| ! | AATCTATGAAGTATGAATAC+AGG | - | chr5.1:31557982-31558001 | MS.gene76628:intron | 25.0% |
| ! | ATGAAGATTTAGTTATGGTA+TGG | + | chr5.1:31557033-31557052 | None:intergenic | 25.0% |
| ! | TGTGTTTAATTAGTTAAGCT+GGG | - | chr5.1:31557795-31557814 | MS.gene76628:intron | 25.0% |
| ! | TTGTGTTTAATTAGTTAAGC+TGG | - | chr5.1:31557794-31557813 | MS.gene76628:intron | 25.0% |
| !! | ATGATTTTGAATGGTGTATT+TGG | + | chr5.1:31557009-31557028 | None:intergenic | 25.0% |
| !! | ATTTGGACTATGGAAATTTT+TGG | + | chr5.1:31556992-31557011 | None:intergenic | 25.0% |
| !! | TTTGGACTATGGAAATTTTT+GGG | + | chr5.1:31556991-31557010 | None:intergenic | 25.0% |
| !!! | AATTTATATGCCTGTTTTTG+AGG | + | chr5.1:31557919-31557938 | None:intergenic | 25.0% |
| AAGACCCAATTGTATAAACA+GGG | - | chr5.1:31556939-31556958 | MS.gene76628:intron | 30.0% | |
| ACATAATCTTAGGGAAATGT+TGG | - | chr5.1:31557381-31557400 | MS.gene76628:intron | 30.0% | |
| AGACTCAAATTGTCAATTCA+TGG | - | chr5.1:31557841-31557860 | MS.gene76628:intron | 30.0% | |
| AGGTATGATTCATATACCTT+TGG | + | chr5.1:31558432-31558451 | None:intergenic | 30.0% | |
| AGTATATGATTAGGTTCGAT+TGG | - | chr5.1:31558263-31558282 | MS.gene76628:intron | 30.0% | |
| ATTTAGCTATCCTCAAAAAC+AGG | - | chr5.1:31557906-31557925 | MS.gene76628:intron | 30.0% | |
| GAAACAGAATTATCTTGAAC+AGG | - | chr5.1:31557444-31557463 | MS.gene76628:CDS | 30.0% | |
| GAAATCAATAGATGAACTTG+TGG | - | chr5.1:31558470-31558489 | MS.gene76628:CDS | 30.0% | |
| GGTGTATGAAGATTTAGTTA+TGG | + | chr5.1:31557038-31557057 | None:intergenic | 30.0% | |
| TGAAGGGTTACATAATCTTA+GGG | - | chr5.1:31557372-31557391 | MS.gene76628:intron | 30.0% | |
| TGTTAAAACTGCTAATGAGT+TGG | - | chr5.1:31557516-31557535 | MS.gene76628:intron | 30.0% | |
| TTAAGCACTCTCTCAATTAT+TGG | + | chr5.1:31556596-31556615 | None:intergenic | 30.0% | |
| TTGAACCAGATGAACTAATT+TGG | + | chr5.1:31557746-31557765 | None:intergenic | 30.0% | |
| ! | TGGTATGGTATGATTTTGAA+TGG | + | chr5.1:31557018-31557037 | None:intergenic | 30.0% |
| !! | AACATTTCTAGCAACATCAA+TGG | - | chr5.1:31557216-31557235 | MS.gene76628:intron | 30.0% |
| !! | ATTTTTGGGCAGGTTTTTAT+TGG | + | chr5.1:31556977-31556996 | None:intergenic | 30.0% |
| !! | GTTTGAAGTGTTTTTGTGTT+TGG | + | chr5.1:31557131-31557150 | None:intergenic | 30.0% |
| !!! | AAGGAACATTTTTTTATGCC+AGG | - | chr5.1:31557307-31557326 | MS.gene76628:intron | 30.0% |
| !!! | AGGAACATTTTTTTATGCCA+GGG | - | chr5.1:31557308-31557327 | MS.gene76628:intron | 30.0% |
| ACTAGCACTAGCACAAAATT+GGG | - | chr5.1:31557267-31557286 | MS.gene76628:intron | 35.0% | |
| AGGATAAAACAAACAGCTGA+AGG | - | chr5.1:31557355-31557374 | MS.gene76628:intron | 35.0% | |
| ATTGTATAAACAGGGCAACA+CGG | - | chr5.1:31556947-31556966 | MS.gene76628:intron | 35.0% | |
| CAAGACCCAATTGTATAAAC+AGG | - | chr5.1:31556938-31556957 | MS.gene76628:intron | 35.0% | |
| CCAACAATGAATGAATGACT+TGG | - | chr5.1:31556867-31556886 | MS.gene76628:intron | 35.0% | |
| CCAAGTCATTCATTCATTGT+TGG | + | chr5.1:31556870-31556889 | None:intergenic | 35.0% | |
| CTGAAGGGTTACATAATCTT+AGG | - | chr5.1:31557371-31557390 | MS.gene76628:intron | 35.0% | |
| GAAAATTGCATTTAGAGACG+AGG | - | chr5.1:31556710-31556729 | MS.gene76628:intron | 35.0% | |
| GGATAAAACAAACAGCTGAA+GGG | - | chr5.1:31557356-31557375 | MS.gene76628:intron | 35.0% | |
| GGTTCGATTGGCAAAATAAA+AGG | - | chr5.1:31558275-31558294 | MS.gene76628:intron | 35.0% | |
| GTTGCCCTGTTTATACAATT+GGG | + | chr5.1:31556946-31556965 | None:intergenic | 35.0% | |
| TCAATGTCTTCTCGTAGTAT+AGG | + | chr5.1:31558452-31558471 | None:intergenic | 35.0% | |
| TGAATGGTGTATTTGGACTA+TGG | + | chr5.1:31557002-31557021 | None:intergenic | 35.0% | |
| TGTTGCCCTGTTTATACAAT+TGG | + | chr5.1:31556947-31556966 | None:intergenic | 35.0% | |
| TGTTGGAAACTTTATCTTGG+AGG | - | chr5.1:31557398-31557417 | MS.gene76628:intron | 35.0% | |
| TTCATGCATTGTTGTGATGA+TGG | - | chr5.1:31556748-31556767 | MS.gene76628:intron | 35.0% | |
| TTCGTCCAAATTAGTTCATC+TGG | - | chr5.1:31557738-31557757 | MS.gene76628:intron | 35.0% | |
| ! | TGGAGTTTTCTCAACTCAAA+TGG | - | chr5.1:31556887-31556906 | MS.gene76628:intron | 35.0% |
| ! | TTTCTAGCAACATCAATGGT+TGG | - | chr5.1:31557220-31557239 | MS.gene76628:intron | 35.0% |
| !! | ATTCATATACCTTTGGTGTC+CGG | + | chr5.1:31558425-31558444 | None:intergenic | 35.0% |
| !!! | GTTTTTGTGTTTGGTGATGT+GGG | + | chr5.1:31557122-31557141 | None:intergenic | 35.0% |
| !!! | GTTTTTTTTCCCTCTTCAGA+TGG | - | chr5.1:31558389-31558408 | MS.gene76628:intron | 35.0% |
| !!! | TGGACATGGTATTTTTTGTG+TGG | + | chr5.1:31557069-31557088 | None:intergenic | 35.0% |
| !!! | TGTTTTTGTGTTTGGTGATG+TGG | + | chr5.1:31557123-31557142 | None:intergenic | 35.0% |
| ACATAACGATCCATCTGAAG+AGG | + | chr5.1:31558402-31558421 | None:intergenic | 40.0% | |
| AGGCAGAGACATATGAAGTA+TGG | - | chr5.1:31558002-31558021 | MS.gene76628:intron | 40.0% | |
| CACTAGCACTAGCACAAAAT+TGG | - | chr5.1:31557266-31557285 | MS.gene76628:intron | 40.0% | |
| CATAACGATCCATCTGAAGA+GGG | + | chr5.1:31558401-31558420 | None:intergenic | 40.0% | |
| CTAGCACTAGCACAAAATTG+GGG | - | chr5.1:31557268-31557287 | MS.gene76628:intron | 40.0% | |
| TGGATAACAAAAGTTCCACG+TGG | - | chr5.1:31556907-31556926 | MS.gene76628:intron | 40.0% | |
| TTCAGATGGATCGTTATGTC+CGG | - | chr5.1:31558403-31558422 | MS.gene76628:intron | 40.0% | |
| ! | AGTGGGTTTGATGCATTTGT+AGG | + | chr5.1:31556799-31556818 | None:intergenic | 40.0% |
| ! | CAATTTTGTGCTAGTGCTAG+TGG | + | chr5.1:31557268-31557287 | None:intergenic | 40.0% |
| !! | GACTATGGAAATTTTTGGGC+AGG | + | chr5.1:31556987-31557006 | None:intergenic | 40.0% |
| !! | GTTGGTTGATAACTTGACTG+AGG | - | chr5.1:31557534-31557553 | MS.gene76628:intron | 40.0% |
| ATCCTTAACACTGCATCCTC+AGG | + | chr5.1:31557340-31557359 | None:intergenic | 45.0% | |
| ATGGAGTAGTGTAGTGGCAT+GGG | + | chr5.1:31557098-31557117 | None:intergenic | 45.0% | |
| TCCTTAACACTGCATCCTCA+GGG | + | chr5.1:31557339-31557358 | None:intergenic | 45.0% | |
| TGTGAGTATACCAGCATAGC+AGG | - | chr5.1:31556531-31556550 | MS.gene76628:CDS | 45.0% | |
| TTTGCCTGAAAATCGTCGCA+AGG | - | chr5.1:31557489-31557508 | MS.gene76628:CDS | 45.0% | |
| ! | GGGCACACGTTCTTTTATGA+AGG | - | chr5.1:31557288-31557307 | MS.gene76628:intron | 45.0% |
| ! | TACTCCTTGCGACGATTTTC+AGG | + | chr5.1:31557496-31557515 | None:intergenic | 45.0% |
| !!! | ATTTTTATAAAGAAAAAAAT+TGG | + | chr5.1:31556690-31556709 | None:intergenic | 5.0% |
| CATGGAGTAGTGTAGTGGCA+TGG | + | chr5.1:31557099-31557118 | None:intergenic | 50.0% | |
| CCTTAACACTGCATCCTCAG+GGG | + | chr5.1:31557338-31557357 | None:intergenic | 50.0% | |
| GCACAAACGCTCCTCGAATT+AGG | + | chr5.1:31558149-31558168 | None:intergenic | 50.0% | |
| GGTCTTGAGATTATGCCACG+TGG | + | chr5.1:31556925-31556944 | None:intergenic | 50.0% | |
| TCGTTATGTCCGGACACCAA+AGG | - | chr5.1:31558413-31558432 | MS.gene76628:intron | 50.0% | |
| !! | GAGGAGCGTTTGTGCTTCAT+AGG | - | chr5.1:31558154-31558173 | MS.gene76628:intron | 50.0% |
| !! | TGTGTTTGGTGATGTGGGCA+TGG | + | chr5.1:31557117-31557136 | None:intergenic | 50.0% |
| ACCAGGACACGCCTAATTCG+AGG | - | chr5.1:31558135-31558154 | MS.gene76628:intron | 55.0% | |
| CCCCTGAGGATGCAGTGTTA+AGG | - | chr5.1:31557335-31557354 | MS.gene76628:intron | 55.0% | |
| GTGGGCATGGAGTAGTGTAG+TGG | + | chr5.1:31557104-31557123 | None:intergenic | 55.0% | |
| TACCAGCATAGCAGGTCAGC+AGG | - | chr5.1:31556539-31556558 | MS.gene76628:CDS | 55.0% | |
| TACCTGCTGACCTGCTATGC+TGG | + | chr5.1:31556544-31556563 | None:intergenic | 55.0% | |
| TCCTCGAATTAGGCGTGTCC+TGG | + | chr5.1:31558139-31558158 | None:intergenic | 55.0% | |
| TGTAGTGGCATGGGTGAAGC+TGG | + | chr5.1:31557089-31557108 | None:intergenic | 55.0% | |
| !! | GTCGGTGTTGTATCGACACC+AGG | - | chr5.1:31558118-31558137 | MS.gene76628:intron | 55.0% |
| GGCATGGGTGAAGCTGGACA+TGG | + | chr5.1:31557083-31557102 | None:intergenic | 60.0% | |
| TATGCCAGGGCTATCCCCTG+AGG | - | chr5.1:31557321-31557340 | MS.gene76628:intron | 60.0% | |
| GCATCCTCAGGGGATAGCCC+TGG | + | chr5.1:31557328-31557347 | None:intergenic | 65.0% |
| Chromosome | Type | Strat | End | Strand | Name |
|---|---|---|---|---|---|
| chr5.1 | gene | 31556477 | 31558506 | 31556477 | ID=MS.gene76628 |
| chr5.1 | mRNA | 31556477 | 31558506 | 31556477 | ID=MS.gene76628.t1;Parent=MS.gene76628 |
| chr5.1 | exon | 31558423 | 31558506 | 31558423 | ID=MS.gene76628.t1.exon1;Parent=MS.gene76628.t1 |
| chr5.1 | CDS | 31558423 | 31558506 | 31558423 | ID=cds.MS.gene76628.t1;Parent=MS.gene76628.t1 |
| chr5.1 | exon | 31557428 | 31557517 | 31557428 | ID=MS.gene76628.t1.exon2;Parent=MS.gene76628.t1 |
| chr5.1 | CDS | 31557428 | 31557517 | 31557428 | ID=cds.MS.gene76628.t1;Parent=MS.gene76628.t1 |
| chr5.1 | exon | 31556477 | 31556575 | 31556477 | ID=MS.gene76628.t1.exon3;Parent=MS.gene76628.t1 |
| chr5.1 | CDS | 31556477 | 31556575 | 31556477 | ID=cds.MS.gene76628.t1;Parent=MS.gene76628.t1 |
| Gene Sequence |
| Protein sequence |
