Alfalfa Gene Editing Database
Alfalfa Gene Editing Database
Nr:
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene46060.t1 | XP_003623171.2 | 84.9 | 225 | 9 | 1 | 1 | 200 | 8 | 232 | 5.30E-98 | 367.1 |
Swissprot:
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene46060.t1 | P32110 | 62.4 | 226 | 58 | 3 | 1 | 200 | 1 | 225 | 8.9e-70 | 264.6 |
Trembl:
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene46060.t1 | I3SEW8 | 84.9 | 225 | 9 | 1 | 1 | 200 | 1 | 225 | 3.8e-98 | 367.1 |
TFs/TRs:
| Gene ID | Type | Classification |
|---|
Protein Kinases:
| Gene ID | Type | Classification |
|---|
Network:
Co-expression Network:
| Gene1 | Gene2 | correlation coefficient | p_value | FDR |
|---|---|---|---|---|
| MS.gene049171 | MS.gene46060 | -0.857822 | 1.26E-62 | -1.69E-46 |
| MS.gene049217 | MS.gene46060 | -0.82688 | 2.13E-54 | -1.69E-46 |
| MS.gene049222 | MS.gene46060 | -0.834203 | 3.43E-56 | -1.69E-46 |
| MS.gene049232 | MS.gene46060 | -0.831522 | 1.59E-55 | -1.69E-46 |
| MS.gene049281 | MS.gene46060 | 0.83598 | 1.22E-56 | -1.69E-46 |
| MS.gene049285 | MS.gene46060 | -0.857452 | 1.62E-62 | -1.69E-46 |
| MS.gene049320 | MS.gene46060 | -0.874029 | 9.29E-68 | -1.69E-46 |
| MS.gene049483 | MS.gene46060 | 0.846143 | 2.61E-59 | -1.69E-46 |
| MS.gene049549 | MS.gene46060 | 0.802716 | 4.92E-49 | -1.69E-46 |
| MS.gene049611 | MS.gene46060 | 0.85782 | 1.26E-62 | -1.69E-46 |
| MS.gene049633 | MS.gene46060 | -0.80932 | 2.01E-50 | -1.69E-46 |
| MS.gene049634 | MS.gene46060 | 0.83661 | 8.46E-57 | -1.69E-46 |
| MS.gene050082 | MS.gene46060 | 0.838397 | 2.95E-57 | -1.69E-46 |
| MS.gene05010 | MS.gene46060 | -0.84984 | 2.50E-60 | -1.69E-46 |
| MS.gene050163 | MS.gene46060 | -0.827707 | 1.35E-54 | -1.69E-46 |
| MS.gene050165 | MS.gene46060 | -0.837417 | 5.26E-57 | -1.69E-46 |
| MS.gene050170 | MS.gene46060 | -0.815234 | 1.03E-51 | -1.69E-46 |
| MS.gene050216 | MS.gene46060 | -0.83553 | 1.59E-56 | -1.69E-46 |
| MS.gene050323 | MS.gene46060 | -0.835241 | 1.88E-56 | -1.69E-46 |
| MS.gene050333 | MS.gene46060 | -0.857879 | 1.21E-62 | -1.69E-46 |
| MS.gene050363 | MS.gene46060 | 0.810853 | 9.37E-51 | -1.69E-46 |
| MS.gene050380 | MS.gene46060 | 0.802906 | 4.49E-49 | -1.69E-46 |
| MS.gene050381 | MS.gene46060 | 0.880535 | 5.07E-70 | -1.69E-46 |
| MS.gene050444 | MS.gene46060 | -0.808452 | 3.08E-50 | -1.69E-46 |
| MS.gene050496 | MS.gene46060 | -0.834682 | 2.60E-56 | -1.69E-46 |
| MS.gene050504 | MS.gene46060 | -0.869663 | 2.62E-66 | -1.69E-46 |
| MS.gene050518 | MS.gene46060 | -0.827976 | 1.16E-54 | -1.69E-46 |
| MS.gene050577 | MS.gene46060 | -0.811022 | 8.62E-51 | -1.69E-46 |
| MS.gene050612 | MS.gene46060 | -0.877733 | 4.96E-69 | -1.69E-46 |
| MS.gene050675 | MS.gene46060 | -0.835593 | 1.53E-56 | -1.69E-46 |
| MS.gene050699 | MS.gene46060 | -0.843585 | 1.28E-58 | -1.69E-46 |
| MS.gene050772 | MS.gene46060 | -0.831711 | 1.43E-55 | -1.69E-46 |
| MS.gene05079 | MS.gene46060 | 0.823763 | 1.16E-53 | -1.69E-46 |
| MS.gene05080 | MS.gene46060 | -0.805636 | 1.21E-49 | -1.69E-46 |
| MS.gene050832 | MS.gene46060 | 0.810651 | 1.04E-50 | -1.69E-46 |
| MS.gene050833 | MS.gene46060 | 0.811389 | 7.17E-51 | -1.69E-46 |
| MS.gene050868 | MS.gene46060 | -0.851659 | 7.69E-61 | -1.69E-46 |
| MS.gene050871 | MS.gene46060 | -0.84786 | 8.85E-60 | -1.69E-46 |
| MS.gene050883 | MS.gene46060 | 0.886001 | 5.00E-72 | -1.69E-46 |
| MS.gene050986 | MS.gene46060 | -0.864785 | 9.47E-65 | -1.69E-46 |
| MS.gene051044 | MS.gene46060 | 0.830724 | 2.50E-55 | -1.69E-46 |
| MS.gene05104 | MS.gene46060 | 0.828415 | 9.10E-55 | -1.69E-46 |
| MS.gene051127 | MS.gene46060 | 0.874979 | 4.42E-68 | -1.69E-46 |
| MS.gene051138 | MS.gene46060 | 0.890017 | 1.44E-73 | -1.69E-46 |
| MS.gene051268 | MS.gene46060 | -0.816081 | 6.64E-52 | -1.69E-46 |
| MS.gene051317 | MS.gene46060 | -0.804633 | 1.97E-49 | -1.69E-46 |
| MS.gene051364 | MS.gene46060 | 0.872774 | 2.46E-67 | -1.69E-46 |
| MS.gene051366 | MS.gene46060 | 0.869013 | 4.25E-66 | -1.69E-46 |
| MS.gene051367 | MS.gene46060 | 0.844144 | 9.07E-59 | -1.69E-46 |
| MS.gene051410 | MS.gene46060 | 0.813978 | 1.95E-51 | -1.69E-46 |
| MS.gene05141 | MS.gene46060 | 0.827701 | 1.35E-54 | -1.69E-46 |
| MS.gene051422 | MS.gene46060 | 0.823305 | 1.49E-53 | -1.69E-46 |
| MS.gene051551 | MS.gene46060 | -0.819657 | 1.04E-52 | -1.69E-46 |
| MS.gene051564 | MS.gene46060 | -0.804532 | 2.06E-49 | -1.69E-46 |
| MS.gene051632 | MS.gene46060 | 0.827714 | 1.34E-54 | -1.69E-46 |
| MS.gene051651 | MS.gene46060 | 0.818256 | 2.15E-52 | -1.69E-46 |
| MS.gene051810 | MS.gene46060 | -0.828431 | 9.03E-55 | -1.69E-46 |
| MS.gene051946 | MS.gene46060 | 0.825779 | 3.89E-54 | -1.69E-46 |
| MS.gene052164 | MS.gene46060 | -0.80916 | 2.17E-50 | -1.69E-46 |
| MS.gene052211 | MS.gene46060 | 0.816967 | 4.21E-52 | -1.69E-46 |
| MS.gene052482 | MS.gene46060 | -0.847435 | 1.16E-59 | -1.69E-46 |
| MS.gene052486 | MS.gene46060 | -0.846116 | 2.66E-59 | -1.69E-46 |
| MS.gene052503 | MS.gene46060 | -0.805655 | 1.20E-49 | -1.69E-46 |
| MS.gene052802 | MS.gene46060 | 0.807977 | 3.88E-50 | -1.69E-46 |
| MS.gene052823 | MS.gene46060 | -0.808427 | 3.11E-50 | -1.69E-46 |
| MS.gene052825 | MS.gene46060 | -0.802052 | 6.73E-49 | -1.69E-46 |
| MS.gene052916 | MS.gene46060 | -0.804541 | 2.06E-49 | -1.69E-46 |
| MS.gene052966 | MS.gene46060 | -0.814262 | 1.68E-51 | -1.69E-46 |
| MS.gene053069 | MS.gene46060 | 0.807908 | 4.02E-50 | -1.69E-46 |
| MS.gene053203 | MS.gene46060 | -0.831511 | 1.60E-55 | -1.69E-46 |
| MS.gene053213 | MS.gene46060 | -0.820587 | 6.34E-53 | -1.69E-46 |
| MS.gene053286 | MS.gene46060 | -0.816906 | 4.34E-52 | -1.69E-46 |
| MS.gene053420 | MS.gene46060 | 0.899144 | 2.65E-77 | -1.69E-46 |
| MS.gene053479 | MS.gene46060 | -0.810771 | 9.76E-51 | -1.69E-46 |
| MS.gene053488 | MS.gene46060 | 0.856524 | 3.04E-62 | -1.69E-46 |
| MS.gene053549 | MS.gene46060 | 0.816055 | 6.73E-52 | -1.69E-46 |
| MS.gene053561 | MS.gene46060 | 0.867337 | 1.47E-65 | -1.69E-46 |
| MS.gene053574 | MS.gene46060 | -0.812406 | 4.31E-51 | -1.69E-46 |
| MS.gene053824 | MS.gene46060 | -0.803979 | 2.69E-49 | -1.69E-46 |
| MS.gene053826 | MS.gene46060 | 0.814841 | 1.25E-51 | -1.69E-46 |
| MS.gene053887 | MS.gene46060 | 0.824518 | 7.73E-54 | -1.69E-46 |
| MS.gene054054 | MS.gene46060 | 0.822336 | 2.50E-53 | -1.69E-46 |
| MS.gene054056 | MS.gene46060 | 0.822713 | 2.04E-53 | -1.69E-46 |
| MS.gene054595 | MS.gene46060 | -0.835534 | 1.59E-56 | -1.69E-46 |
| MS.gene054600 | MS.gene46060 | -0.803079 | 4.14E-49 | -1.69E-46 |
| MS.gene054616 | MS.gene46060 | 0.856685 | 2.72E-62 | -1.69E-46 |
| MS.gene054642 | MS.gene46060 | -0.847551 | 1.08E-59 | -1.69E-46 |
| MS.gene054706 | MS.gene46060 | 0.845446 | 4.04E-59 | -1.69E-46 |
| MS.gene054707 | MS.gene46060 | 0.830831 | 2.35E-55 | -1.69E-46 |
| MS.gene054708 | MS.gene46060 | 0.855288 | 6.97E-62 | -1.69E-46 |
| MS.gene05470 | MS.gene46060 | -0.827845 | 1.25E-54 | -1.69E-46 |
| MS.gene054954 | MS.gene46060 | -0.864749 | 9.72E-65 | -1.69E-46 |
| MS.gene054959 | MS.gene46060 | 0.832968 | 6.98E-56 | -1.69E-46 |
| MS.gene055111 | MS.gene46060 | 0.817675 | 2.92E-52 | -1.69E-46 |
| MS.gene055124 | MS.gene46060 | 0.845302 | 4.42E-59 | -1.69E-46 |
| MS.gene055139 | MS.gene46060 | 0.819205 | 1.31E-52 | -1.69E-46 |
| MS.gene055152 | MS.gene46060 | 0.808706 | 2.71E-50 | -1.69E-46 |
| MS.gene055154 | MS.gene46060 | 0.920263 | 1.60E-87 | -1.69E-46 |
| MS.gene055202 | MS.gene46060 | 0.847789 | 9.26E-60 | -1.69E-46 |
| MS.gene055362 | MS.gene46060 | -0.871674 | 5.71E-67 | -1.69E-46 |
| MS.gene055502 | MS.gene46060 | -0.875368 | 3.26E-68 | -1.69E-46 |
| MS.gene055549 | MS.gene46060 | 0.810999 | 8.72E-51 | -1.69E-46 |
| MS.gene055550 | MS.gene46060 | 0.811841 | 5.72E-51 | -1.69E-46 |
| MS.gene055577 | MS.gene46060 | -0.834092 | 3.66E-56 | -1.69E-46 |
| MS.gene055638 | MS.gene46060 | -0.800076 | 1.71E-48 | -1.69E-46 |
| MS.gene055748 | MS.gene46060 | -0.809621 | 1.73E-50 | -1.69E-46 |
| MS.gene055750 | MS.gene46060 | -0.810967 | 8.86E-51 | -1.69E-46 |
| MS.gene055751 | MS.gene46060 | -0.822634 | 2.13E-53 | -1.69E-46 |
| MS.gene055776 | MS.gene46060 | -0.819996 | 8.66E-53 | -1.69E-46 |
| MS.gene05589 | MS.gene46060 | -0.845156 | 4.84E-59 | -1.69E-46 |
| MS.gene055942 | MS.gene46060 | 0.855679 | 5.37E-62 | -1.69E-46 |
| MS.gene056224 | MS.gene46060 | 0.831226 | 1.88E-55 | -1.69E-46 |
| MS.gene056310 | MS.gene46060 | 0.819168 | 1.34E-52 | -1.69E-46 |
| MS.gene056311 | MS.gene46060 | 0.855637 | 5.52E-62 | -1.69E-46 |
| MS.gene056313 | MS.gene46060 | 0.815135 | 1.08E-51 | -1.69E-46 |
| MS.gene056359 | MS.gene46060 | 0.800146 | 1.65E-48 | -1.69E-46 |
| MS.gene056408 | MS.gene46060 | 0.802468 | 5.53E-49 | -1.69E-46 |
| MS.gene056504 | MS.gene46060 | -0.877182 | 7.71E-69 | -1.69E-46 |
| MS.gene056510 | MS.gene46060 | -0.824892 | 6.31E-54 | -1.69E-46 |
| MS.gene056550 | MS.gene46060 | 0.833089 | 6.52E-56 | -1.69E-46 |
| MS.gene056590 | MS.gene46060 | 0.820661 | 6.10E-53 | -1.69E-46 |
| MS.gene056591 | MS.gene46060 | 0.822494 | 2.30E-53 | -1.69E-46 |
| MS.gene056657 | MS.gene46060 | -0.857639 | 1.42E-62 | -1.69E-46 |
| MS.gene056692 | MS.gene46060 | -0.827886 | 1.22E-54 | -1.69E-46 |
| MS.gene056748 | MS.gene46060 | 0.808864 | 2.51E-50 | -1.69E-46 |
| MS.gene056761 | MS.gene46060 | 0.815234 | 1.03E-51 | -1.69E-46 |
| MS.gene056856 | MS.gene46060 | 0.830697 | 2.54E-55 | -1.69E-46 |
| MS.gene056857 | MS.gene46060 | 0.815273 | 1.01E-51 | -1.69E-46 |
| MS.gene057014 | MS.gene46060 | 0.864795 | 9.40E-65 | -1.69E-46 |
| MS.gene057473 | MS.gene46060 | 0.828884 | 7.02E-55 | -1.69E-46 |
| MS.gene057548 | MS.gene46060 | 0.807286 | 5.44E-50 | -1.69E-46 |
| MS.gene057549 | MS.gene46060 | 0.836714 | 7.96E-57 | -1.69E-46 |
| MS.gene057768 | MS.gene46060 | 0.801257 | 9.81E-49 | -1.69E-46 |
| MS.gene058067 | MS.gene46060 | 0.80739 | 5.17E-50 | -1.69E-46 |
| MS.gene058068 | MS.gene46060 | 0.863295 | 2.76E-64 | -1.69E-46 |
| MS.gene058093 | MS.gene46060 | 0.829143 | 6.07E-55 | -1.69E-46 |
| MS.gene058099 | MS.gene46060 | 0.870237 | 1.70E-66 | -1.69E-46 |
| MS.gene058108 | MS.gene46060 | 0.825661 | 4.15E-54 | -1.69E-46 |
| MS.gene058109 | MS.gene46060 | 0.86272 | 4.15E-64 | -1.69E-46 |
| MS.gene058111 | MS.gene46060 | 0.870801 | 1.11E-66 | -1.69E-46 |
| MS.gene058117 | MS.gene46060 | 0.836367 | 9.75E-57 | -1.69E-46 |
| MS.gene058157 | MS.gene46060 | -0.820698 | 5.98E-53 | -1.69E-46 |
| MS.gene058171 | MS.gene46060 | 0.872892 | 2.24E-67 | -1.69E-46 |
| MS.gene058173 | MS.gene46060 | 0.859696 | 3.46E-63 | -1.69E-46 |
| MS.gene058175 | MS.gene46060 | 0.875425 | 3.11E-68 | -1.69E-46 |
| MS.gene058268 | MS.gene46060 | 0.852259 | 5.19E-61 | -1.69E-46 |
| MS.gene058269 | MS.gene46060 | 0.846865 | 1.66E-59 | -1.69E-46 |
| MS.gene058334 | MS.gene46060 | 0.823954 | 1.05E-53 | -1.69E-46 |
| MS.gene058338 | MS.gene46060 | -0.800839 | 1.19E-48 | -1.69E-46 |
| MS.gene05837 | MS.gene46060 | -0.82907 | 6.32E-55 | -1.69E-46 |
| MS.gene058419 | MS.gene46060 | -0.858797 | 6.44E-63 | -1.69E-46 |
| MS.gene058493 | MS.gene46060 | 0.861433 | 1.03E-63 | -1.69E-46 |
| MS.gene058494 | MS.gene46060 | 0.872377 | 3.33E-67 | -1.69E-46 |
| MS.gene058496 | MS.gene46060 | 0.831625 | 1.50E-55 | -1.69E-46 |
| MS.gene058544 | MS.gene46060 | -0.828264 | 9.90E-55 | -1.69E-46 |
| MS.gene058603 | MS.gene46060 | 0.850372 | 1.77E-60 | -1.69E-46 |
| MS.gene058628 | MS.gene46060 | 0.817814 | 2.71E-52 | -1.69E-46 |
| MS.gene058630 | MS.gene46060 | 0.807604 | 4.66E-50 | -1.69E-46 |
| MS.gene058773 | MS.gene46060 | -0.851811 | 6.96E-61 | -1.69E-46 |
| MS.gene058838 | MS.gene46060 | -0.811794 | 5.86E-51 | -1.69E-46 |
| MS.gene058840 | MS.gene46060 | 0.82484 | 6.49E-54 | -1.69E-46 |
| MS.gene058978 | MS.gene46060 | 0.823721 | 1.19E-53 | -1.69E-46 |
| MS.gene059022 | MS.gene46060 | -0.887012 | 2.07E-72 | -1.69E-46 |
| MS.gene059023 | MS.gene46060 | -0.84033 | 9.28E-58 | -1.69E-46 |
| MS.gene059045 | MS.gene46060 | 0.821254 | 4.45E-53 | -1.69E-46 |
| MS.gene05913 | MS.gene46060 | -0.800549 | 1.37E-48 | -1.69E-46 |
| MS.gene059223 | MS.gene46060 | 0.852417 | 4.68E-61 | -1.69E-46 |
| MS.gene059677 | MS.gene46060 | -0.868063 | 8.62E-66 | -1.69E-46 |
| MS.gene059682 | MS.gene46060 | 0.803571 | 3.27E-49 | -1.69E-46 |
| MS.gene059690 | MS.gene46060 | 0.842682 | 2.23E-58 | -1.69E-46 |
| MS.gene059691 | MS.gene46060 | 0.810535 | 1.10E-50 | -1.69E-46 |
| MS.gene059694 | MS.gene46060 | 0.843002 | 1.83E-58 | -1.69E-46 |
| MS.gene059697 | MS.gene46060 | 0.833394 | 5.47E-56 | -1.69E-46 |
| MS.gene059718 | MS.gene46060 | -0.844953 | 5.49E-59 | -1.69E-46 |
| MS.gene059756 | MS.gene46060 | -0.802963 | 4.37E-49 | -1.69E-46 |
| MS.gene059865 | MS.gene46060 | -0.869223 | 3.64E-66 | -1.69E-46 |
| MS.gene059916 | MS.gene46060 | 0.816967 | 4.21E-52 | -1.69E-46 |
| MS.gene059953 | MS.gene46060 | 0.822327 | 2.51E-53 | -1.69E-46 |
| MS.gene059955 | MS.gene46060 | 0.823817 | 1.13E-53 | -1.69E-46 |
| MS.gene060595 | MS.gene46060 | 0.822896 | 1.85E-53 | -1.69E-46 |
| MS.gene060703 | MS.gene46060 | -0.827278 | 1.71E-54 | -1.69E-46 |
| MS.gene06074 | MS.gene46060 | 0.80899 | 2.36E-50 | -1.69E-46 |
| MS.gene060762 | MS.gene46060 | -0.850378 | 1.77E-60 | -1.69E-46 |
| MS.gene060778 | MS.gene46060 | -0.827885 | 1.22E-54 | -1.69E-46 |
| MS.gene06077 | MS.gene46060 | -0.87112 | 8.70E-67 | -1.69E-46 |
| MS.gene060823 | MS.gene46060 | 0.827252 | 1.73E-54 | -1.69E-46 |
| MS.gene060982 | MS.gene46060 | -0.830701 | 2.53E-55 | -1.69E-46 |
| MS.gene061044 | MS.gene46060 | 0.813312 | 2.73E-51 | -1.69E-46 |
PPI:
| Gene1 | Gene2 | Type |
|---|
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene46060.t1 | MTR_7g065260 | 84.889 | 225 | 9 | 1 | 1 | 200 | 8 | 232 | 8.26e-123 | 347 |
| MS.gene46060.t1 | MTR_7g065590 | 69.778 | 225 | 42 | 2 | 1 | 200 | 1 | 224 | 1.81e-103 | 297 |
| MS.gene46060.t1 | MTR_7g065290 | 68.000 | 225 | 46 | 2 | 1 | 200 | 1 | 224 | 1.53e-101 | 292 |
| MS.gene46060.t1 | MTR_7g065230 | 69.778 | 225 | 37 | 3 | 1 | 200 | 1 | 219 | 3.20e-101 | 291 |
| MS.gene46060.t1 | MTR_7g065600 | 67.556 | 225 | 47 | 2 | 1 | 200 | 1 | 224 | 2.07e-100 | 290 |
| MS.gene46060.t1 | MTR_7g065265 | 67.111 | 225 | 48 | 2 | 1 | 200 | 1 | 224 | 5.49e-97 | 281 |
| MS.gene46060.t1 | MTR_7g065270 | 65.778 | 225 | 51 | 2 | 1 | 200 | 1 | 224 | 2.57e-96 | 279 |
| MS.gene46060.t1 | MTR_7g065660 | 61.947 | 226 | 59 | 3 | 1 | 200 | 1 | 225 | 1.54e-91 | 267 |
| MS.gene46060.t1 | MTR_7g065720 | 60.619 | 226 | 62 | 3 | 1 | 200 | 1 | 225 | 3.90e-89 | 261 |
| MS.gene46060.t1 | MTR_7g065750 | 57.965 | 226 | 69 | 2 | 1 | 200 | 1 | 226 | 1.83e-85 | 252 |
| MS.gene46060.t1 | MTR_4g019790 | 56.250 | 224 | 72 | 2 | 1 | 199 | 1 | 223 | 1.33e-83 | 247 |
| MS.gene46060.t1 | MTR_7g065740 | 54.667 | 225 | 75 | 3 | 1 | 199 | 1 | 224 | 8.47e-82 | 243 |
| MS.gene46060.t1 | MTR_7g065640 | 57.965 | 226 | 50 | 4 | 1 | 200 | 1 | 207 | 2.35e-79 | 236 |
| MS.gene46060.t1 | MTR_7g065630 | 57.589 | 224 | 65 | 3 | 1 | 199 | 19 | 237 | 6.36e-78 | 233 |
| MS.gene46060.t1 | MTR_4g019780 | 53.425 | 219 | 75 | 3 | 2 | 194 | 3 | 220 | 1.53e-71 | 216 |
| MS.gene46060.t1 | MTR_7g065710 | 54.589 | 207 | 65 | 2 | 8 | 189 | 5 | 207 | 3.50e-68 | 208 |
| MS.gene46060.t1 | MTR_7g065680 | 54.709 | 223 | 71 | 3 | 1 | 198 | 1 | 218 | 2.10e-63 | 196 |
| MS.gene46060.t1 | MTR_7g065700 | 55.769 | 208 | 63 | 2 | 1 | 183 | 1 | 204 | 3.15e-62 | 193 |
| MS.gene46060.t1 | MTR_1g115195 | 41.441 | 222 | 94 | 4 | 7 | 196 | 3 | 220 | 5.23e-48 | 156 |
| MS.gene46060.t1 | MTR_8g087425 | 40.930 | 215 | 100 | 3 | 4 | 192 | 2 | 215 | 9.00e-46 | 151 |
| MS.gene46060.t1 | MTR_6g080440 | 40.090 | 222 | 104 | 4 | 7 | 200 | 3 | 223 | 8.97e-45 | 148 |
| MS.gene46060.t1 | MTR_8g087410 | 40.789 | 228 | 98 | 5 | 4 | 200 | 3 | 224 | 4.86e-44 | 146 |
| MS.gene46060.t1 | MTR_1g090150 | 39.189 | 222 | 105 | 4 | 6 | 199 | 2 | 221 | 3.39e-43 | 144 |
| MS.gene46060.t1 | MTR_1g090070 | 40.541 | 222 | 101 | 5 | 7 | 199 | 9 | 228 | 2.58e-42 | 142 |
| MS.gene46060.t1 | MTR_3g099757 | 40.724 | 221 | 103 | 4 | 5 | 199 | 3 | 221 | 7.90e-42 | 140 |
| MS.gene46060.t1 | MTR_1g090090 | 39.623 | 212 | 96 | 6 | 7 | 189 | 3 | 211 | 1.64e-40 | 137 |
| MS.gene46060.t1 | MTR_8g061950 | 38.462 | 221 | 100 | 6 | 5 | 191 | 3 | 221 | 2.86e-39 | 134 |
| MS.gene46060.t1 | MTR_1g090060 | 39.823 | 226 | 98 | 8 | 7 | 200 | 3 | 222 | 3.52e-39 | 134 |
| MS.gene46060.t1 | MTR_4g059730 | 38.710 | 217 | 97 | 7 | 6 | 191 | 3 | 214 | 8.90e-38 | 130 |
| MS.gene46060.t1 | MTR_1g090100 | 38.009 | 221 | 105 | 6 | 8 | 199 | 3 | 220 | 1.25e-37 | 130 |
| MS.gene46060.t1 | MTR_5g037380 | 40.376 | 213 | 90 | 6 | 1 | 179 | 1 | 210 | 3.79e-37 | 129 |
| MS.gene46060.t1 | MTR_5g040430 | 35.514 | 214 | 105 | 4 | 1 | 182 | 1 | 213 | 5.15e-35 | 123 |
| MS.gene46060.t1 | MTR_2g070200 | 37.619 | 210 | 102 | 4 | 6 | 188 | 3 | 210 | 3.24e-32 | 116 |
| MS.gene46060.t1 | MTR_4g124130 | 39.583 | 192 | 79 | 7 | 6 | 166 | 3 | 188 | 5.89e-28 | 105 |
| MS.gene46060.t1 | MTR_3g467420 | 41.071 | 168 | 93 | 6 | 32 | 196 | 59 | 223 | 3.70e-27 | 103 |
| MS.gene46060.t1 | MTR_2g070120 | 33.649 | 211 | 107 | 7 | 6 | 188 | 3 | 208 | 2.50e-25 | 98.2 |
| MS.gene46060.t1 | MTR_2g070130 | 34.286 | 210 | 98 | 8 | 6 | 183 | 3 | 204 | 3.22e-25 | 98.2 |
| MS.gene46060.t1 | MTR_5g076900 | 34.146 | 205 | 103 | 5 | 3 | 179 | 2 | 202 | 5.14e-25 | 97.4 |
| MS.gene46060.t1 | MTR_2g070150 | 34.314 | 204 | 98 | 6 | 6 | 179 | 3 | 200 | 1.32e-24 | 95.9 |
| MS.gene46060.t1 | MTR_3g467430 | 35.961 | 203 | 100 | 6 | 4 | 179 | 6 | 205 | 1.91e-24 | 96.3 |
| MS.gene46060.t1 | MTR_8g056940 | 37.821 | 156 | 92 | 4 | 31 | 184 | 53 | 205 | 2.49e-24 | 95.5 |
| MS.gene46060.t1 | MTR_2g070210 | 34.975 | 203 | 100 | 5 | 6 | 179 | 3 | 202 | 1.31e-23 | 94.0 |
| MS.gene46060.t1 | MTR_2g070140 | 36.196 | 163 | 92 | 6 | 31 | 188 | 37 | 192 | 5.89e-23 | 91.7 |
| MS.gene46060.t1 | MTR_2g070060 | 35.849 | 159 | 97 | 4 | 28 | 184 | 50 | 205 | 6.03e-22 | 89.4 |
| MS.gene46060.t1 | MTR_2g070180 | 31.553 | 206 | 111 | 5 | 6 | 184 | 3 | 205 | 1.92e-21 | 88.2 |
| MS.gene46060.t1 | MTR_2g070070 | 33.486 | 218 | 114 | 6 | 7 | 197 | 4 | 217 | 6.42e-21 | 86.7 |
| MS.gene46060.t1 | MTR_0186s0030 | 47.253 | 91 | 44 | 3 | 31 | 119 | 53 | 141 | 1.53e-17 | 75.9 |
| MS.gene46060.t1 | MTR_2g070110 | 34.839 | 155 | 87 | 5 | 31 | 179 | 53 | 199 | 4.17e-17 | 76.6 |
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene46060.t1 | AT2G29420 | 45.455 | 220 | 92 | 4 | 3 | 196 | 5 | 222 | 5.83e-56 | 177 |
| MS.gene46060.t1 | AT3G09270 | 43.111 | 225 | 98 | 5 | 3 | 199 | 2 | 224 | 1.73e-50 | 163 |
| MS.gene46060.t1 | AT2G29490 | 44.811 | 212 | 89 | 4 | 1 | 185 | 1 | 211 | 1.97e-45 | 150 |
| MS.gene46060.t1 | AT2G29450 | 42.793 | 222 | 96 | 4 | 3 | 193 | 2 | 223 | 3.43e-44 | 147 |
| MS.gene46060.t1 | AT2G29480 | 42.453 | 212 | 94 | 4 | 1 | 185 | 1 | 211 | 3.80e-44 | 147 |
| MS.gene46060.t1 | AT2G29460 | 41.509 | 212 | 96 | 4 | 1 | 185 | 1 | 211 | 4.17e-43 | 144 |
| MS.gene46060.t1 | AT2G29470 | 41.315 | 213 | 96 | 4 | 1 | 185 | 1 | 212 | 9.85e-42 | 140 |
| MS.gene46060.t1 | AT1G10370 | 39.623 | 212 | 92 | 6 | 1 | 179 | 1 | 209 | 5.05e-38 | 131 |
| MS.gene46060.t1 | AT2G29440 | 40.566 | 212 | 97 | 5 | 1 | 185 | 1 | 210 | 1.69e-37 | 130 |
| MS.gene46060.t1 | AT1G59670 | 40.670 | 209 | 89 | 5 | 5 | 179 | 4 | 211 | 2.37e-37 | 129 |
| MS.gene46060.t1 | AT1G59700 | 42.202 | 218 | 90 | 7 | 5 | 188 | 4 | 219 | 3.43e-37 | 129 |
| MS.gene46060.t1 | AT1G69930 | 36.364 | 220 | 108 | 4 | 2 | 190 | 7 | 225 | 6.90e-37 | 128 |
| MS.gene46060.t1 | AT1G10360 | 35.266 | 207 | 100 | 5 | 6 | 179 | 4 | 209 | 1.96e-33 | 119 |
| MS.gene46060.t1 | AT1G27130 | 33.778 | 225 | 114 | 5 | 1 | 192 | 1 | 223 | 1.76e-32 | 117 |
| MS.gene46060.t1 | AT5G62480 | 36.000 | 225 | 108 | 5 | 8 | 197 | 9 | 232 | 1.10e-31 | 115 |
| MS.gene46060.t1 | AT1G69920 | 34.404 | 218 | 108 | 5 | 1 | 183 | 26 | 243 | 5.42e-31 | 114 |
| MS.gene46060.t1 | AT1G74590 | 33.333 | 231 | 120 | 6 | 1 | 199 | 1 | 229 | 1.15e-29 | 110 |
| MS.gene46060.t1 | AT1G78370 | 38.690 | 168 | 98 | 4 | 31 | 196 | 53 | 217 | 1.54e-29 | 109 |
| MS.gene46060.t1 | AT1G78320 | 42.073 | 164 | 90 | 4 | 31 | 192 | 53 | 213 | 3.54e-29 | 108 |
| MS.gene46060.t1 | AT1G78380 | 37.500 | 200 | 95 | 5 | 7 | 179 | 4 | 200 | 2.10e-28 | 106 |
| MS.gene46060.t1 | AT1G27140 | 31.797 | 217 | 113 | 4 | 1 | 183 | 1 | 216 | 2.58e-27 | 103 |
| MS.gene46060.t1 | AT1G78340 | 37.356 | 174 | 81 | 4 | 6 | 152 | 3 | 175 | 1.28e-26 | 101 |
| MS.gene46060.t1 | AT1G53680 | 34.300 | 207 | 106 | 5 | 1 | 179 | 1 | 205 | 1.72e-25 | 99.0 |
| MS.gene46060.t1 | AT1G17190 | 42.754 | 138 | 74 | 4 | 31 | 166 | 54 | 188 | 4.95e-25 | 97.4 |
| MS.gene46060.t1 | AT1G17170 | 37.870 | 169 | 98 | 6 | 31 | 197 | 53 | 216 | 5.15e-25 | 97.4 |
| MS.gene46060.t1 | AT1G17180 | 37.580 | 157 | 93 | 4 | 31 | 185 | 53 | 206 | 1.37e-23 | 94.0 |
| MS.gene46060.t1 | AT3G43800 | 33.690 | 187 | 113 | 6 | 1 | 179 | 22 | 205 | 9.64e-23 | 91.7 |
| MS.gene46060.t1 | AT1G78360 | 32.367 | 207 | 109 | 5 | 7 | 185 | 4 | 207 | 5.35e-20 | 84.3 |
| MS.gene46060.t1 | AT5G62480 | 30.846 | 201 | 126 | 6 | 7 | 197 | 8 | 205 | 1.24e-16 | 75.1 |
| MS.gene46060.t1 | AT5G62480 | 30.846 | 201 | 125 | 6 | 8 | 197 | 9 | 206 | 3.33e-16 | 74.3 |
| MS.gene46060.t1 | AT1G78320 | 34.392 | 189 | 117 | 6 | 6 | 192 | 3 | 186 | 8.82e-16 | 72.4 |
Find 42 sgRNAs with CRISPR-Local
Find 111 sgRNAs with CRISPR-GE
CRISPR-Local
| sgRNA_sequence | on_target_score | Position | Region |
|---|---|---|---|
| AAAGAGCCTTGGCACGTTTC+TGG | 0.188650 | 7.2:-42766927 | MS.gene46060:CDS |
| CAAGGATCTGAAGGCAATAT+TGG | 0.242620 | 7.2:+42766952 | None:intergenic |
| TTGGGTGGTTATTGAATTCT+TGG | 0.242799 | 7.2:+42765834 | None:intergenic |
| ATTGGCCTTGTTGACATTAC+TGG | 0.271417 | 7.2:-42765950 | MS.gene46060:CDS |
| CCTATTACTTCTTCTACAAT+AGG | 0.288411 | 7.2:+42765905 | None:intergenic |
| GTGCTCAAGGACAAGTTCTT+TGG | 0.331974 | 7.2:-42765983 | MS.gene46060:CDS |
| CTCCTCGATGGCATCAAATA+AGG | 0.347943 | 7.2:-42767245 | None:intergenic |
| CCTATTGTAGAAGAAGTAAT+AGG | 0.355988 | 7.2:-42765905 | MS.gene46060:CDS |
| TACTTTATCATCTATGAACT+TGG | 0.387024 | 7.2:+42766903 | None:intergenic |
| AATTTCCTAAGTTATACAAT+TGG | 0.429121 | 7.2:-42765859 | MS.gene46060:CDS |
| ATCTCCACCCTGCACACAAA+TGG | 0.430527 | 7.2:+42767190 | None:intergenic |
| ATCACAAGGGATTCTGATAT+AGG | 0.433145 | 7.2:+42767009 | None:intergenic |
| TTCTTTGGTGGAGAAGAGAT+TGG | 0.437865 | 7.2:-42765968 | MS.gene46060:CDS |
| TCCTAGACAAGAAACCCTTT+TGG | 0.438903 | 7.2:-42765792 | MS.gene46060:CDS |
| CTATTACTTCTTCTACAATA+GGG | 0.448963 | 7.2:+42765906 | None:intergenic |
| TGGCTCCAATTGTATAACTT+AGG | 0.453850 | 7.2:+42765854 | None:intergenic |
| GAGATCTTTCGAAGGCCAAA+AGG | 0.460962 | 7.2:+42765777 | None:intergenic |
| AGAGATTGAGAAGGGTATTG+AGG | 0.468601 | 7.2:-42766038 | MS.gene46060:CDS |
| CTCAAGGACAAGTTCTTTGG+TGG | 0.495298 | 7.2:-42765980 | MS.gene46060:CDS |
| TTGAGTATATTGATGAGACT+TGG | 0.504629 | 7.2:-42766984 | MS.gene46060:CDS |
| GCCAAAAGGGTTTCTTGTCT+AGG | 0.505910 | 7.2:+42765791 | None:intergenic |
| TTATCATTATGAACTAATAC+AGG | 0.517988 | 7.2:+42767033 | None:intergenic |
| AGATCCTTGTAAAAGAGCCT+TGG | 0.519646 | 7.2:-42766938 | MS.gene46060:CDS |
| AGTGGCTCTTCAATTTCTTG+AGG | 0.526966 | 7.2:-42766008 | MS.gene46060:CDS |
| GATGAGAAAGAGATTGAGAA+GGG | 0.537394 | 7.2:-42766046 | MS.gene46060:CDS |
| ATTTCTTGAGGATGTGCTCA+AGG | 0.537553 | 7.2:-42765996 | MS.gene46060:CDS |
| AGATCTTTCGAAGGCCAAAA+GGG | 0.542519 | 7.2:+42765778 | None:intergenic |
| AGGCAAGTCCATTTGTGTGC+AGG | 0.542935 | 7.2:-42767198 | MS.gene46060:CDS |
| GGCAAGTCCATTTGTGTGCA+GGG | 0.572089 | 7.2:-42767197 | MS.gene46060:CDS |
| TGATGAGAAAGAGATTGAGA+AGG | 0.573160 | 7.2:-42766047 | MS.gene46060:CDS |
| GAGATTGCTCTAAAACTGAA+AGG | 0.585304 | 7.2:-42767172 | MS.gene46060:CDS |
| AATCTCTTTCTCATCAAGAG+TGG | 0.590956 | 7.2:+42766054 | None:intergenic |
| GATGGCATCAAATAAGGAAG+AGG | 0.597653 | 7.2:-42767239 | MS.gene46060:CDS |
| CAATAACCACCCAATTGTCA+AGG | 0.599260 | 7.2:-42765825 | MS.gene46060:CDS |
| CAATATACTCAAGAATCACA+AGG | 0.601780 | 7.2:+42766995 | None:intergenic |
| AAAAGGGTTTCTTGTCTAGG+AGG | 0.611561 | 7.2:+42765794 | None:intergenic |
| TTCAGAACGAGATCTTTCGA+AGG | 0.621786 | 7.2:+42765769 | None:intergenic |
| GGGTATTGAGGAAACAGAAG+TGG | 0.632493 | 7.2:-42766026 | MS.gene46060:CDS |
| AGACTCCAGTAATGTCAACA+AGG | 0.670765 | 7.2:+42765945 | None:intergenic |
| AATATACTCAAGAATCACAA+GGG | 0.678725 | 7.2:+42766996 | None:intergenic |
| CTTGGACCAGAAACGTGCCA+AGG | 0.686787 | 7.2:+42766921 | None:intergenic |
| AAGTCCATTTGTGTGCAGGG+TGG | 0.735254 | 7.2:-42767194 | MS.gene46060:CDS |
CRISPR-GE
| badsite warning | sgRNA_sequence | Strand | Position | Region | GC_content |
|---|---|---|---|---|---|
| !! | AAGGATTAAAATATATTTAA+GGG | + | chr7.2:42766562-42766581 | None:intergenic | 10.0% |
| !! | TTATTTAACCAAAAAAATTA+TGG | + | chr7.2:42766530-42766549 | None:intergenic | 10.0% |
| !! | GAAGGATTAAAATATATTTA+AGG | + | chr7.2:42766563-42766582 | None:intergenic | 15.0% |
| !!! | AATTTTTCATTCATGAAATT+AGG | - | chr7.2:42766615-42766634 | MS.gene46060:intron | 15.0% |
| !!! | ATGAATGAAAAATTTTAGAA+GGG | + | chr7.2:42766609-42766628 | None:intergenic | 15.0% |
| !!! | CCTCTAAAAAAATAAAAATA+GGG | + | chr7.2:42766793-42766812 | None:intergenic | 15.0% |
| !!! | TAAAATATTTCTTAGACTTT+TGG | - | chr7.2:42766583-42766602 | MS.gene46060:intron | 15.0% |
| !!! | TCCTCTAAAAAAATAAAAAT+AGG | + | chr7.2:42766794-42766813 | None:intergenic | 15.0% |
| !! | AATTTCCTAAGTTATACAAT+TGG | - | chr7.2:42767127-42767146 | MS.gene46060:intron | 20.0% |
| !! | TTATCATTATGAACTAATAC+AGG | + | chr7.2:42765956-42765975 | None:intergenic | 20.0% |
| !!! | AAAAGCCTAAGAAATATTTT+AGG | - | chr7.2:42766716-42766735 | MS.gene46060:intron | 20.0% |
| !!! | AGTCTAAGAAATATTTTAGA+AGG | + | chr7.2:42766581-42766600 | None:intergenic | 20.0% |
| !!! | CATGAATGAAAAATTTTAGA+AGG | + | chr7.2:42766610-42766629 | None:intergenic | 20.0% |
| !!! | CCCTATTTTTATTTTTTTAG+AGG | - | chr7.2:42766790-42766809 | MS.gene46060:intron | 20.0% |
| !!! | TAAAATATTTCTTAGGCTTT+TGG | + | chr7.2:42766717-42766736 | None:intergenic | 20.0% |
| ! | AATATACTCAAGAATCACAA+GGG | + | chr7.2:42765993-42766012 | None:intergenic | 25.0% |
| ! | AATCAAACGTTGGTATATTT+AGG | - | chr7.2:42766747-42766766 | MS.gene46060:intron | 25.0% |
| ! | CTATTACTTCTTCTACAATA+GGG | + | chr7.2:42767083-42767102 | None:intergenic | 25.0% |
| ! | TACTTTATCATCTATGAACT+TGG | + | chr7.2:42766086-42766105 | None:intergenic | 25.0% |
| !! | TAATTTTGCTTTGTGTAACT+CGG | - | chr7.2:42766126-42766145 | MS.gene46060:intron | 25.0% |
| !!! | TGTTTTAACTAAAAACACAC+AGG | - | chr7.2:42766413-42766432 | MS.gene46060:intron | 25.0% |
| !!! | TTTTTGAGCAAAAAACTGAA+AGG | - | chr7.2:42765848-42765867 | MS.gene46060:CDS | 25.0% |
| AACCAAAAAAATTATGGACC+AGG | + | chr7.2:42766524-42766543 | None:intergenic | 30.0% | |
| ACAGGAACTTTCTTATAAAC+AGG | + | chr7.2:42765938-42765957 | None:intergenic | 30.0% | |
| ACCACTAATCTCACAAAATA+AGG | + | chr7.2:42766888-42766907 | None:intergenic | 30.0% | |
| AGAGTTACACGAAAAATACT+TGG | + | chr7.2:42766288-42766307 | None:intergenic | 30.0% | |
| AGGAGTTGAATACAAATATG+AGG | - | chr7.2:42765868-42765887 | MS.gene46060:CDS | 30.0% | |
| CAATATACTCAAGAATCACA+AGG | + | chr7.2:42765994-42766013 | None:intergenic | 30.0% | |
| CAGGAACTTTCTTATAAACA+GGG | + | chr7.2:42765937-42765956 | None:intergenic | 30.0% | |
| CCTATTACTTCTTCTACAAT+AGG | + | chr7.2:42767084-42767103 | None:intergenic | 30.0% | |
| CCTATTGTAGAAGAAGTAAT+AGG | - | chr7.2:42767081-42767100 | MS.gene46060:intron | 30.0% | |
| GAGTTACACGAAAAATACTT+GGG | + | chr7.2:42766287-42766306 | None:intergenic | 30.0% | |
| GATGTTCATCTCAAATCAAA+TGG | + | chr7.2:42766452-42766471 | None:intergenic | 30.0% | |
| GTCCTCCTAAAATATTTCTT+AGG | + | chr7.2:42766724-42766743 | None:intergenic | 30.0% | |
| TTGAGTATATTGATGAGACT+TGG | - | chr7.2:42766002-42766021 | MS.gene46060:CDS | 30.0% | |
| ! | AAAAATTATGGACCAGGTTT+TGG | + | chr7.2:42766518-42766537 | None:intergenic | 30.0% |
| ! | AATTTTGCTTTGTGTAACTC+GGG | - | chr7.2:42766127-42766146 | MS.gene46060:intron | 30.0% |
| ! | GCAAATTTTCCTTGACAATT+GGG | + | chr7.2:42767173-42767192 | None:intergenic | 30.0% |
| ! | TATTTTGTGAGATTAGTGGT+TGG | - | chr7.2:42766888-42766907 | MS.gene46060:intron | 30.0% |
| !! | AGCCTAAGAAATATTTTAGG+AGG | - | chr7.2:42766719-42766738 | MS.gene46060:intron | 30.0% |
| !!! | AACCTGGTCCATAATTTTTT+TGG | - | chr7.2:42766519-42766538 | MS.gene46060:intron | 30.0% |
| !!! | ACCTTATTTTGTGAGATTAG+TGG | - | chr7.2:42766884-42766903 | MS.gene46060:intron | 30.0% |
| !!! | CACTATTTTTTTAACAGCAG+AGG | - | chr7.2:42766660-42766679 | MS.gene46060:intron | 30.0% |
| AAAATTAGAGAGAGAGAGAG+GGG | + | chr7.2:42766113-42766132 | None:intergenic | 35.0% | |
| AATCTCTTTCTCATCAAGAG+TGG | + | chr7.2:42766935-42766954 | None:intergenic | 35.0% | |
| ACCTTTCAATTGTGATCAGA+CGG | + | chr7.2:42766387-42766406 | None:intergenic | 35.0% | |
| ATCACAAGGGATTCTGATAT+AGG | + | chr7.2:42765980-42765999 | None:intergenic | 35.0% | |
| CAAAATTAGAGAGAGAGAGA+GGG | + | chr7.2:42766114-42766133 | None:intergenic | 35.0% | |
| GATGAGAAAGAGATTGAGAA+GGG | - | chr7.2:42766940-42766959 | MS.gene46060:CDS | 35.0% | |
| TGATGAGAAAGAGATTGAGA+AGG | - | chr7.2:42766939-42766958 | MS.gene46060:CDS | 35.0% | |
| TGGCTCCAATTGTATAACTT+AGG | + | chr7.2:42767135-42767154 | None:intergenic | 35.0% | |
| TTGGGTGGTTATTGAATTCT+TGG | + | chr7.2:42767155-42767174 | None:intergenic | 35.0% | |
| ! | AATTTTACAGCACCAAAACC+TGG | - | chr7.2:42766503-42766522 | MS.gene46060:intron | 35.0% |
| ! | AATTTTCCTTGACAATTGGG+TGG | + | chr7.2:42767170-42767189 | None:intergenic | 35.0% |
| ! | CTGGAGTCTTCATATCTTTT+TGG | - | chr7.2:42767055-42767074 | MS.gene46060:intron | 35.0% |
| ! | GGCAAATTTTCCTTGACAAT+TGG | + | chr7.2:42767174-42767193 | None:intergenic | 35.0% |
| ! | TCACACACACACACAATTTT+TGG | - | chr7.2:42766317-42766336 | MS.gene46060:intron | 35.0% |
| !! | GAGATTGCTCTAAAACTGAA+AGG | - | chr7.2:42765814-42765833 | MS.gene46060:CDS | 35.0% |
| !!! | ACACACACAATTTTTGGAAC+AGG | - | chr7.2:42766323-42766342 | MS.gene46060:intron | 35.0% |
| AAAAGGGTTTCTTGTCTAGG+AGG | + | chr7.2:42767195-42767214 | None:intergenic | 40.0% | |
| AACAGCAGAGGCTAATTTCA+TGG | - | chr7.2:42766672-42766691 | MS.gene46060:intron | 40.0% | |
| AATTAGCACTAGGTTTCACG+CGG | + | chr7.2:42766487-42766506 | None:intergenic | 40.0% | |
| AGACTCCAGTAATGTCAACA+AGG | + | chr7.2:42767044-42767063 | None:intergenic | 40.0% | |
| AGATCCTTGTAAAAGAGCCT+TGG | - | chr7.2:42766048-42766067 | MS.gene46060:CDS | 40.0% | |
| AGATCTTTCGAAGGCCAAAA+GGG | + | chr7.2:42767211-42767230 | None:intergenic | 40.0% | |
| AGTGGCTCTTCAATTTCTTG+AGG | - | chr7.2:42766978-42766997 | MS.gene46060:CDS | 40.0% | |
| ATACATTGCCACACAACATC+TGG | - | chr7.2:42766202-42766221 | MS.gene46060:intron | 40.0% | |
| ATTGTGTGTGTGTGTGAAGT+TGG | + | chr7.2:42766314-42766333 | None:intergenic | 40.0% | |
| ATTTCTTGAGGATGTGCTCA+AGG | - | chr7.2:42766990-42767009 | MS.gene46060:CDS | 40.0% | |
| CAAGGATCTGAAGGCAATAT+TGG | + | chr7.2:42766037-42766056 | None:intergenic | 40.0% | |
| CAATAACCACCCAATTGTCA+AGG | - | chr7.2:42767161-42767180 | MS.gene46060:intron | 40.0% | |
| GCAAAATTAGAGAGAGAGAG+AGG | + | chr7.2:42766115-42766134 | None:intergenic | 40.0% | |
| GGAGGACTAAAATCAAACGT+TGG | - | chr7.2:42766737-42766756 | MS.gene46060:intron | 40.0% | |
| GTCACCGTGACATTAAATCT+GGG | - | chr7.2:42766170-42766189 | MS.gene46060:intron | 40.0% | |
| TACATTGCCACACAACATCT+GGG | - | chr7.2:42766203-42766222 | MS.gene46060:intron | 40.0% | |
| TGTCACCGTGACATTAAATC+TGG | - | chr7.2:42766169-42766188 | MS.gene46060:intron | 40.0% | |
| TTCAGAACGAGATCTTTCGA+AGG | + | chr7.2:42767220-42767239 | None:intergenic | 40.0% | |
| TTCTTTGGTGGAGAAGAGAT+TGG | - | chr7.2:42767018-42767037 | MS.gene46060:CDS | 40.0% | |
| ! | AAGGAAGAGGTGAAGCTTTT+TGG | - | chr7.2:42765760-42765779 | MS.gene46060:CDS | 40.0% |
| ! | GCTCTTTTACAAGGATCTGA+AGG | + | chr7.2:42766046-42766065 | None:intergenic | 40.0% |
| ! | GGTGCTGTAAAATTAGCACT+AGG | + | chr7.2:42766497-42766516 | None:intergenic | 40.0% |
| ! | TCCTAGACAAGAAACCCTTT+TGG | - | chr7.2:42767194-42767213 | MS.gene46060:CDS | 40.0% |
| !! | AGAGATTGAGAAGGGTATTG+AGG | - | chr7.2:42766948-42766967 | MS.gene46060:CDS | 40.0% |
| !! | ATTGGCCTTGTTGACATTAC+TGG | - | chr7.2:42767036-42767055 | MS.gene46060:CDS | 40.0% |
| !!! | GGTGAAGCTTTTTGGAATGA+AGG | - | chr7.2:42765768-42765787 | MS.gene46060:CDS | 40.0% |
| ATTATGTCTGGGCCACACAA+AGG | + | chr7.2:42766244-42766263 | None:intergenic | 45.0% | |
| CACAACACAACACCTTTGTG+TGG | - | chr7.2:42766229-42766248 | MS.gene46060:intron | 45.0% | |
| CTCAAGGACAAGTTCTTTGG+TGG | - | chr7.2:42767006-42767025 | MS.gene46060:CDS | 45.0% | |
| GAGATCTTTCGAAGGCCAAA+AGG | + | chr7.2:42767212-42767231 | None:intergenic | 45.0% | |
| GCCAAAAGGGTTTCTTGTCT+AGG | + | chr7.2:42767198-42767217 | None:intergenic | 45.0% | |
| GCCGTCTGATCACAATTGAA+AGG | - | chr7.2:42766383-42766402 | MS.gene46060:intron | 45.0% | |
| GTCACCGTGACATTATGTCT+GGG | + | chr7.2:42766255-42766274 | None:intergenic | 45.0% | |
| GTGCTCAAGGACAAGTTCTT+TGG | - | chr7.2:42767003-42767022 | MS.gene46060:CDS | 45.0% | |
| GTGGCCCAGATTTAATGTCA+CGG | + | chr7.2:42766177-42766196 | None:intergenic | 45.0% | |
| GTGTGGCAATGTATGTTGTG+TGG | + | chr7.2:42766196-42766215 | None:intergenic | 45.0% | |
| TGTCACCGTGACATTATGTC+TGG | + | chr7.2:42766256-42766275 | None:intergenic | 45.0% | |
| !! | CACAAAGGTGTTGTGTTGTG+TGG | + | chr7.2:42766229-42766248 | None:intergenic | 45.0% |
| !! | GGGTATTGAGGAAACAGAAG+TGG | - | chr7.2:42766960-42766979 | MS.gene46060:CDS | 45.0% |
| AAAGAGCCTTGGCACGTTTC+TGG | - | chr7.2:42766059-42766078 | MS.gene46060:CDS | 50.0% | |
| AAGTCCATTTGTGTGCAGGG+TGG | - | chr7.2:42765792-42765811 | MS.gene46060:CDS | 50.0% | |
| AGGATTCCTGCTGTTACAGC+AGG | - | chr7.2:42766343-42766362 | MS.gene46060:intron | 50.0% | |
| AGGCAAGTCCATTTGTGTGC+AGG | - | chr7.2:42765788-42765807 | MS.gene46060:CDS | 50.0% | |
| ATCTCCACCCTGCACACAAA+TGG | + | chr7.2:42765799-42765818 | None:intergenic | 50.0% | |
| GGCAAGTCCATTTGTGTGCA+GGG | - | chr7.2:42765789-42765808 | MS.gene46060:CDS | 50.0% | |
| GTGGCCCAGACATAATGTCA+CGG | - | chr7.2:42766248-42766267 | MS.gene46060:intron | 50.0% | |
| ! | CGTGCCAAGGCTCTTTTACA+AGG | + | chr7.2:42766055-42766074 | None:intergenic | 50.0% |
| !! | GTGTAACTCGGGAAGCACTT+GGG | - | chr7.2:42766138-42766157 | MS.gene46060:intron | 50.0% |
| !! | TGTGTAACTCGGGAAGCACT+TGG | - | chr7.2:42766137-42766156 | MS.gene46060:intron | 50.0% |
| ACAGCACCTGCTGTAACAGC+AGG | + | chr7.2:42766352-42766371 | None:intergenic | 55.0% | |
| CTTGGACCAGAAACGTGCCA+AGG | + | chr7.2:42766068-42766087 | None:intergenic | 55.0% | |
| TGTGTGGCCCAGATGTTGTG+TGG | + | chr7.2:42766213-42766232 | None:intergenic | 55.0% |
| Chromosome | Type | Strat | End | Strand | Name |
|---|---|---|---|---|---|
| chr7.2 | gene | 42765748 | 42767260 | 42765748 | ID=MS.gene46060 |
| chr7.2 | mRNA | 42765748 | 42767260 | 42765748 | ID=MS.gene46060.t1;Parent=MS.gene46060 |
| chr7.2 | exon | 42767171 | 42767260 | 42767171 | ID=MS.gene46060.t1.exon1;Parent=MS.gene46060.t1 |
| chr7.2 | CDS | 42767171 | 42767260 | 42767171 | ID=cds.MS.gene46060.t1;Parent=MS.gene46060.t1 |
| chr7.2 | exon | 42766906 | 42767061 | 42766906 | ID=MS.gene46060.t1.exon2;Parent=MS.gene46060.t1 |
| chr7.2 | CDS | 42766906 | 42767061 | 42766906 | ID=cds.MS.gene46060.t1;Parent=MS.gene46060.t1 |
| chr7.2 | exon | 42765748 | 42766104 | 42765748 | ID=MS.gene46060.t1.exon3;Parent=MS.gene46060.t1 |
| chr7.2 | CDS | 42765748 | 42766104 | 42765748 | ID=cds.MS.gene46060.t1;Parent=MS.gene46060.t1 |
| Gene Sequence |
| Protein sequence |
