AlfalfaGEDB | MS.gene27827

M. sativa cultivar XinJiangDaYe / MS.gene27827

KEGG: -
GO: GO:0003674 GO:0003676 GO:0003677 GO:0003700 GO:0005488 GO:0006355 GO:0008150 GO:0009889 GO:0010468 GO:0010556 GO:0019219 GO:0019222 GO:0031323 GO:0031326 GO:0043565 GO:0050789 GO:0050794 GO:0051171 GO:0051252 GO:0060255 GO:0065007 GO:0080090 GO:0097159 GO:0140110 GO:1901363 GO:1903506 GO:2000112 GO:2001141
PFAM: PF03106.18

Nr:

Query id	Subject id	identity %	alignment length	mismatches	gap openings	q. start	q. end	s. start	s. end	e-value	bit score
MS.gene27827.t1	XP_003629812.2	97.1	245	6	1	1	244	1	245	9.80E-131	476.1

Swissprot:

Query id	Subject id	identity %	alignment length	mismatches	gap openings	q. start	q. end	s. start	s. end	e-value	bit score
MS.gene27827.t1	Q9LP56	47.4	249	100	6	1	226	7	247	1.9e-45	184.1

Trembl:

Query id	Subject id	identity %	alignment length	mismatches	gap openings	q. start	q. end	s. start	s. end	e-value	bit score
MS.gene27827.t1	G7LJI3	97.1	245	6	1	1	244	1	245	7.1e-131	476.1

TFs/TRs:

Gene ID	Type	Classification
MS.gene27827.t1	TF	WRKY

Protein Kinases:

Gene ID	Type	Classification

Network:

Co-expression Network:

Gene1	Gene2	correlation coefficient	p_value	FDR
MS.gene049147	MS.gene27827	0.826033	3.39E-54	-1.69E-46
MS.gene049217	MS.gene27827	-0.843945	1.03E-58	-1.69E-46
MS.gene049222	MS.gene27827	-0.808275	3.35E-50	-1.69E-46
MS.gene049267	MS.gene27827	0.816826	4.53E-52	-1.69E-46
MS.gene049320	MS.gene27827	-0.81254	4.03E-51	-1.69E-46
MS.gene049483	MS.gene27827	0.804669	1.93E-49	-1.69E-46
MS.gene049611	MS.gene27827	0.803311	3.70E-49	-1.69E-46
MS.gene049634	MS.gene27827	0.827874	1.23E-54	-1.69E-46
MS.gene050216	MS.gene27827	-0.826816	2.20E-54	-1.69E-46
MS.gene050353	MS.gene27827	0.820641	6.16E-53	-1.69E-46
MS.gene050354	MS.gene27827	0.815466	9.11E-52	-1.69E-46
MS.gene050380	MS.gene27827	0.875389	3.20E-68	-1.69E-46
MS.gene050381	MS.gene27827	0.876086	1.85E-68	-1.69E-46
MS.gene050612	MS.gene27827	-0.80053	1.38E-48	-1.69E-46
MS.gene050772	MS.gene27827	-0.804111	2.53E-49	-1.69E-46
MS.gene05079	MS.gene27827	0.804179	2.45E-49	-1.69E-46
MS.gene050809	MS.gene27827	0.832496	9.15E-56	-1.69E-46
MS.gene05104	MS.gene27827	0.812985	3.22E-51	-1.69E-46
MS.gene051127	MS.gene27827	0.819105	1.38E-52	-1.69E-46
MS.gene051858	MS.gene27827	-0.826269	2.98E-54	-1.69E-46
MS.gene052379	MS.gene27827	-0.821005	5.08E-53	-1.69E-46
MS.gene053018	MS.gene27827	-0.810216	1.29E-50	-1.69E-46
MS.gene053104	MS.gene27827	-0.81044	1.15E-50	-1.69E-46
MS.gene053420	MS.gene27827	0.836282	1.03E-56	-1.69E-46
MS.gene053488	MS.gene27827	0.837628	4.65E-57	-1.69E-46
MS.gene053561	MS.gene27827	0.881312	2.66E-70	-1.69E-46
MS.gene054003	MS.gene27827	-0.806833	6.79E-50	-1.69E-46
MS.gene054595	MS.gene27827	-0.802571	5.27E-49	-1.69E-46
MS.gene054616	MS.gene27827	0.828705	7.75E-55	-1.69E-46
MS.gene054642	MS.gene27827	-0.818465	1.93E-52	-1.69E-46
MS.gene054707	MS.gene27827	0.803094	4.11E-49	-1.69E-46
MS.gene054708	MS.gene27827	0.836981	6.80E-57	-1.69E-46
MS.gene055111	MS.gene27827	0.80671	7.21E-50	-1.69E-46
MS.gene055124	MS.gene27827	0.849826	2.52E-60	-1.69E-46
MS.gene055154	MS.gene27827	0.86275	4.06E-64	-1.69E-46
MS.gene055202	MS.gene27827	0.822675	2.09E-53	-1.69E-46
MS.gene055502	MS.gene27827	-0.811734	6.04E-51	-1.69E-46
MS.gene055722	MS.gene27827	-0.816716	4.79E-52	-1.69E-46
MS.gene05592	MS.gene27827	-0.817953	2.52E-52	-1.69E-46
MS.gene055959	MS.gene27827	0.809091	2.25E-50	-1.69E-46
MS.gene056313	MS.gene27827	0.82174	3.44E-53	-1.69E-46
MS.gene056422	MS.gene27827	-0.83454	2.83E-56	-1.69E-46
MS.gene056448	MS.gene27827	-0.823775	1.16E-53	-1.69E-46
MS.gene056657	MS.gene27827	-0.810867	9.31E-51	-1.69E-46
MS.gene056942	MS.gene27827	-0.819447	1.16E-52	-1.69E-46
MS.gene057129	MS.gene27827	-0.80158	8.42E-49	-1.69E-46
MS.gene057146	MS.gene27827	-0.802915	4.47E-49	-1.69E-46
MS.gene057926	MS.gene27827	-0.811526	6.70E-51	-1.69E-46
MS.gene058093	MS.gene27827	0.826907	2.10E-54	-1.69E-46
MS.gene058099	MS.gene27827	0.820949	5.23E-53	-1.69E-46
MS.gene058171	MS.gene27827	0.818044	2.41E-52	-1.69E-46
MS.gene058173	MS.gene27827	0.807262	5.51E-50	-1.69E-46
MS.gene058175	MS.gene27827	0.814683	1.36E-51	-1.69E-46
MS.gene058179	MS.gene27827	0.825624	4.24E-54	-1.69E-46
MS.gene058459	MS.gene27827	-0.806701	7.24E-50	-1.69E-46
MS.gene058840	MS.gene27827	0.999102	2.64E-290	-1.69E-46
MS.gene059037	MS.gene27827	0.835585	1.54E-56	-1.69E-46
MS.gene059038	MS.gene27827	0.814546	1.46E-51	-1.69E-46
MS.gene05913	MS.gene27827	-0.833736	4.49E-56	-1.69E-46
MS.gene059367	MS.gene27827	-0.804201	2.42E-49	-1.69E-46
MS.gene059536	MS.gene27827	-0.814684	1.36E-51	-1.69E-46
MS.gene059690	MS.gene27827	0.831745	1.40E-55	-1.69E-46
MS.gene059691	MS.gene27827	0.838288	3.14E-57	-1.69E-46
MS.gene059694	MS.gene27827	0.843585	1.28E-58	-1.69E-46
MS.gene059697	MS.gene27827	0.852731	3.81E-61	-1.69E-46
MS.gene059711	MS.gene27827	-0.805988	1.02E-49	-1.69E-46
MS.gene059902	MS.gene27827	-0.827496	1.52E-54	-1.69E-46
MS.gene059916	MS.gene27827	0.816031	6.82E-52	-1.69E-46
MS.gene059943	MS.gene27827	0.841198	5.50E-58	-1.69E-46
MS.gene059944	MS.gene27827	0.813573	2.39E-51	-1.69E-46
MS.gene060205	MS.gene27827	0.803696	3.08E-49	-1.69E-46
MS.gene060482	MS.gene27827	-0.830237	3.29E-55	-1.69E-46
MS.gene06074	MS.gene27827	0.881893	1.64E-70	-1.69E-46
MS.gene060804	MS.gene27827	-0.812438	4.24E-51	-1.69E-46
MS.gene060818	MS.gene27827	-0.837492	5.03E-57	-1.69E-46
MS.gene061041	MS.gene27827	-0.81536	9.62E-52	-1.69E-46
MS.gene061134	MS.gene27827	-0.818136	2.29E-52	-1.69E-46
MS.gene061200	MS.gene27827	-0.808955	2.40E-50	-1.69E-46

PPI:

Gene1	Gene2	Type
MS.gene073173	MS.gene27827	PPI

Query id	Subject id	identity %	alignment length	mismatches	gap openings	q. start	q. end	s. start	s. end	e-value	bit score
MS.gene27827.t1	MTR_8g087000	97.143	245	6	1	1	244	1	245	3.13e-178	489
MS.gene27827.t1	MTR_8g087000	96.735	245	6	2	1	244	1	244	1.11e-175	483
MS.gene27827.t1	MTR_8g087000	95.973	149	6	0	96	244	35	183	7.81e-105	301
MS.gene27827.t1	MTR_2g016770	53.000	200	71	6	39	227	4	191	2.77e-62	194
MS.gene27827.t1	MTR_2g016770	52.850	193	68	6	46	227	3	183	5.63e-61	191
MS.gene27827.t1	MTR_2g083870	52.404	208	69	7	42	226	47	247	3.26e-59	188
MS.gene27827.t1	MTR_2g032030	56.452	124	43	2	26	140	210	331	5.45e-38	137
MS.gene27827.t1	MTR_2g032030	56.452	124	43	2	26	140	210	331	7.09e-38	138
MS.gene27827.t1	MTR_7g109600	59.184	98	37	2	45	142	25	119	8.01e-35	125
MS.gene27827.t1	MTR_7g079040	54.128	109	34	2	33	141	127	219	1.90e-31	118
MS.gene27827.t1	MTR_4g127040	49.533	107	47	1	31	137	207	306	3.22e-29	112
MS.gene27827.t1	MTR_5g016610	50.485	103	42	2	33	135	165	258	3.66e-28	108
MS.gene27827.t1	MTR_8g028565	44.828	116	57	1	38	153	124	232	4.86e-28	109
MS.gene27827.t1	MTR_1g099600	44.531	128	57	3	49	163	145	271	4.95e-28	108
MS.gene27827.t1	MTR_4g094908	55.914	93	34	3	43	135	240	325	7.05e-28	108
MS.gene27827.t1	MTR_8g098945	58.904	73	30	0	77	149	130	202	2.06e-27	106
MS.gene27827.t1	MTR_1g009613	52.809	89	35	1	45	133	238	319	9.58e-27	105
MS.gene27827.t1	MTR_1g070455	68.333	60	19	0	75	134	292	351	2.32e-25	102
MS.gene27827.t1	MTR_2g024350	58.462	65	27	0	75	139	7	71	1.65e-23	95.1
MS.gene27827.t1	MTR_2g024380	59.677	62	25	0	75	136	250	311	5.89e-22	94.4
MS.gene27827.t1	MTR_3g108960	43.269	104	49	3	33	133	275	371	9.24e-22	93.2
MS.gene27827.t1	MTR_0117s0040	57.627	59	25	0	75	133	73	131	1.61e-21	90.1
MS.gene27827.t1	MTR_7g110720	58.462	65	27	0	76	140	216	280	4.29e-20	88.6
MS.gene27827.t1	MTR_7g110720	58.462	65	27	0	76	140	189	253	5.16e-20	88.2
MS.gene27827.t1	MTR_3g053330	53.521	71	32	1	66	136	242	311	2.06e-19	87.0
MS.gene27827.t1	MTR_2g023930	59.016	61	25	0	76	136	305	365	2.55e-19	87.0
MS.gene27827.t1	MTR_8g069935	39.048	105	63	1	74	177	329	433	5.26e-19	85.9
MS.gene27827.t1	MTR_2g088000	54.930	71	31	1	66	136	340	409	5.86e-19	85.9
MS.gene27827.t1	MTR_5g042920	53.030	66	30	1	77	142	321	385	7.10e-19	85.1
MS.gene27827.t1	MTR_5g042920	49.206	63	30	2	74	136	149	209	2.31e-13	69.3
MS.gene27827.t1	MTR_7g100510	53.521	71	32	1	77	147	362	431	1.02e-18	84.7
MS.gene27827.t1	MTR_7g100510	50.794	63	29	2	74	136	187	247	2.46e-14	72.0
MS.gene27827.t1	MTR_4g094588	58.065	62	25	1	77	138	179	239	1.06e-18	84.0
MS.gene27827.t1	MTR_4g094412	58.065	62	26	0	76	137	234	295	1.31e-18	84.7
MS.gene27827.t1	MTR_4g094412	58.065	62	26	0	76	137	243	304	1.31e-18	84.7
MS.gene27827.t1	MTR_7g109800	43.529	85	47	1	77	161	146	229	1.35e-18	83.2
MS.gene27827.t1	MTR_4g082580	51.515	66	31	1	77	142	279	343	3.66e-18	82.8
MS.gene27827.t1	MTR_4g049760	53.968	63	29	0	76	138	290	352	4.77e-18	83.2
MS.gene27827.t1	MTR_5g094430	48.485	66	33	1	77	142	253	317	6.79e-18	82.4
MS.gene27827.t1	MTR_5g091390	54.839	62	27	1	77	138	158	218	7.30e-18	81.3
MS.gene27827.t1	MTR_5g094430	48.485	66	33	1	77	142	231	295	7.46e-18	82.0
MS.gene27827.t1	MTR_7g062220	45.714	105	52	4	35	136	82	184	7.94e-18	81.3
MS.gene27827.t1	MTR_4g107970	54.839	62	28	0	76	137	255	316	8.88e-18	82.4
MS.gene27827.t1	MTR_4g107970	54.839	62	28	0	76	137	178	239	9.60e-18	82.4
MS.gene27827.t1	MTR_5g094430	48.485	66	33	1	77	142	365	429	1.10e-17	82.0
MS.gene27827.t1	MTR_2g045360	56.667	60	26	0	77	136	212	271	1.11e-17	81.6
MS.gene27827.t1	MTR_7g011820	50.000	66	32	1	77	142	411	475	1.32e-17	82.0
MS.gene27827.t1	MTR_7g011820	34.906	106	52	3	46	136	183	286	1.32e-12	67.0
MS.gene27827.t1	MTR_4g132430	55.738	61	27	0	76	136	127	187	1.48e-17	80.9
MS.gene27827.t1	MTR_4g132430	55.738	61	27	0	76	136	261	321	1.51e-17	81.6
MS.gene27827.t1	MTR_4g049790	50.794	63	31	0	76	138	312	374	1.60e-17	81.6
MS.gene27827.t1	MTR_7g009730	49.315	73	36	1	67	138	209	281	3.30e-17	80.9
MS.gene27827.t1	MTR_3g056100	50.794	63	30	1	77	139	416	477	4.26e-17	80.5
MS.gene27827.t1	MTR_1g086790	42.308	78	44	1	77	154	159	235	4.64e-17	79.3
MS.gene27827.t1	MTR_3g056100	50.794	63	30	1	77	139	403	464	4.64e-17	80.5
MS.gene27827.t1	MTR_3g056100	50.794	63	30	1	77	139	272	333	4.65e-17	80.1
MS.gene27827.t1	MTR_3g056100	50.794	63	30	1	77	139	259	320	4.66e-17	80.1
MS.gene27827.t1	MTR_1g013760	51.724	58	28	0	77	134	141	198	5.87e-17	78.6
MS.gene27827.t1	MTR_8g067635	52.381	63	30	0	77	139	350	412	6.64e-17	79.7
MS.gene27827.t1	MTR_3g106060	51.724	58	28	0	77	134	139	196	1.07e-16	77.8
MS.gene27827.t1	MTR_5g043880	37.391	115	63	3	45	156	98	206	2.28e-16	76.6
MS.gene27827.t1	MTR_3g009470	37.500	88	54	1	77	164	496	582	2.34e-16	78.2
MS.gene27827.t1	MTR_3g009470	36.522	115	58	4	65	172	269	375	1.99e-14	72.8
MS.gene27827.t1	MTR_3g031220	44.304	79	41	2	77	155	366	441	4.56e-16	77.4
MS.gene27827.t1	MTR_3g031220	38.710	93	53	3	77	167	199	289	6.49e-13	68.2
MS.gene27827.t1	MTR_4g007060	50.000	60	30	0	77	136	129	188	6.76e-16	75.5
MS.gene27827.t1	MTR_4g007060	50.000	60	30	0	77	136	163	222	7.47e-16	75.9
MS.gene27827.t1	MTR_2g105060	38.462	91	55	1	77	167	95	184	7.82e-16	74.7
MS.gene27827.t1	MTR_8g067650	50.794	63	31	0	77	139	340	402	9.31e-16	76.3
MS.gene27827.t1	MTR_2g105060	38.462	91	55	1	77	167	170	259	1.22e-15	75.1
MS.gene27827.t1	MTR_7g071120	40.698	86	44	2	77	156	325	409	1.38e-15	75.9
MS.gene27827.t1	MTR_7g071120	44.776	67	35	2	77	143	167	231	6.73e-11	62.0
MS.gene27827.t1	MTR_4g122530	42.857	70	39	1	77	146	209	277	1.56e-15	75.5
MS.gene27827.t1	MTR_6g053200	38.462	91	45	1	60	139	303	393	1.68e-15	75.9
MS.gene27827.t1	MTR_4g130900	53.968	63	28	1	77	139	360	421	2.18e-15	75.5
MS.gene27827.t1	MTR_7g080020	44.928	69	37	1	77	145	494	561	2.47e-15	75.5
MS.gene27827.t1	MTR_7g080020	51.613	62	28	2	77	138	281	340	7.44e-13	68.2
MS.gene27827.t1	MTR_8g092010	44.286	70	38	1	77	146	109	177	3.20e-15	72.0
MS.gene27827.t1	MTR_5g097490	51.562	64	30	1	76	139	252	314	3.35e-15	74.3
MS.gene27827.t1	MTR_4g013260	49.206	63	31	1	77	139	337	398	5.74e-15	73.9
MS.gene27827.t1	MTR_4g013260	46.667	60	31	1	77	136	185	243	3.50e-11	62.8
MS.gene27827.t1	MTR_8g099350	37.931	116	63	4	18	131	81	189	5.81e-15	73.6
MS.gene27827.t1	MTR_7g109600	61.702	47	18	0	96	142	7	53	7.95e-15	71.2
MS.gene27827.t1	MTR_3g095040	45.714	70	37	1	77	146	119	187	7.97e-15	71.2
MS.gene27827.t1	MTR_2g033820	46.774	62	32	1	77	138	204	264	1.15e-14	72.8
MS.gene27827.t1	MTR_5g067680	47.692	65	32	1	69	131	195	259	1.18e-14	72.8
MS.gene27827.t1	MTR_1g015140	52.632	57	26	1	77	133	103	158	1.40e-14	69.7
MS.gene27827.t1	MTR_3g090860	53.333	60	26	1	74	131	131	190	1.51e-14	72.4
MS.gene27827.t1	MTR_5g074400	45.714	70	37	1	77	146	421	489	1.59e-14	72.8
MS.gene27827.t1	MTR_5g074400	48.333	60	29	2	77	136	244	301	1.88e-11	63.9
MS.gene27827.t1	MTR_1g013790	46.667	60	32	0	77	136	102	161	1.79e-14	71.2
MS.gene27827.t1	MTR_7g080000	47.619	63	32	1	77	139	433	494	1.88e-14	72.8
MS.gene27827.t1	MTR_7g080000	54.839	62	26	2	77	138	235	294	3.07e-14	72.0
MS.gene27827.t1	MTR_7g028415	44.118	68	35	2	77	144	94	158	2.10e-14	69.3
MS.gene27827.t1	MTR_7g028710	44.118	68	35	2	77	144	94	158	2.10e-14	69.3
MS.gene27827.t1	MTR_3g009470	48.611	72	35	2	65	136	269	338	2.16e-14	72.4
MS.gene27827.t1	MTR_6g086555	49.206	63	30	2	76	137	206	267	3.16e-14	71.6
MS.gene27827.t1	MTR_3g104750	52.632	57	26	1	77	133	105	160	4.01e-14	68.6
MS.gene27827.t1	MTR_1g077780	46.970	66	34	1	77	142	63	127	4.97e-14	67.8
MS.gene27827.t1	MTR_7g117200	38.000	100	53	3	69	159	111	210	9.52e-14	70.1
MS.gene27827.t1	MTR_7g079010	49.123	57	28	1	77	133	142	197	1.43e-13	68.2
MS.gene27827.t1	MTR_4g047580	46.032	63	34	0	76	138	281	343	1.60e-13	69.7
MS.gene27827.t1	MTR_8g007270	34.188	117	68	3	18	134	104	211	2.52e-13	67.4
MS.gene27827.t1	MTR_8g027860	30.625	160	77	7	77	213	137	285	3.14e-13	68.6
MS.gene27827.t1	MTR_8g092140	48.276	58	29	1	77	134	161	217	4.46e-13	67.0
MS.gene27827.t1	MTR_3g031220	38.710	93	53	3	77	167	199	289	6.19e-13	67.8
MS.gene27827.t1	MTR_7g073430	33.813	139	73	3	34	160	87	218	7.83e-13	67.0
MS.gene27827.t1	MTR_3g095080	48.276	58	29	1	77	134	145	201	8.53e-13	65.9
MS.gene27827.t1	MTR_3g095080	48.276	58	29	1	77	134	169	225	9.33e-13	66.2
MS.gene27827.t1	MTR_1g078260	41.772	79	44	2	77	154	248	325	8.71e-12	64.7
MS.gene27827.t1	MTR_2g075610	34.426	122	64	3	56	170	4	116	3.18e-11	60.8
MS.gene27827.t1	MTR_7g073380	34.951	103	55	2	70	160	117	219	3.82e-11	62.0
MS.gene27827.t1	MTR_2g075750	35.417	96	51	2	77	170	29	115	6.96e-11	60.1

Query id	Subject id	identity %	alignment length	mismatches	gap openings	q. start	q. end	s. start	s. end	e-value	bit score
MS.gene27827.t1	AT1G29280	52.381	252	83	7	1	226	7	247	6.57e-75	228
MS.gene27827.t1	AT3G58710	42.308	260	110	6	1	229	1	251	7.41e-55	177
MS.gene27827.t1	AT3G58710	41.538	260	111	6	1	229	1	250	1.88e-53	174
MS.gene27827.t1	AT2G34830	65.625	96	31	1	45	140	186	279	1.54e-37	136
MS.gene27827.t1	AT2G34830	65.625	96	31	1	45	140	195	288	1.79e-37	136
MS.gene27827.t1	AT1G30650	64.583	96	32	1	45	140	188	281	7.35e-37	134
MS.gene27827.t1	AT4G01250	50.420	119	44	3	33	148	94	200	9.48e-31	115
MS.gene27827.t1	AT4G24240	52.577	97	39	1	45	141	257	346	3.09e-28	110
MS.gene27827.t1	AT2G23320	50.549	91	38	1	45	135	216	299	3.74e-28	109
MS.gene27827.t1	AT5G45050	57.576	99	29	3	45	141	1158	1245	1.99e-27	110
MS.gene27827.t1	AT5G45050	57.576	99	29	3	45	141	1130	1217	2.12e-27	110
MS.gene27827.t1	AT5G45050	52.586	116	40	4	30	141	1002	1106	2.51e-27	110
MS.gene27827.t1	AT5G52830	59.302	86	30	2	76	157	165	249	2.73e-27	107
MS.gene27827.t1	AT4G23550	59.259	81	31	1	76	154	140	220	2.90e-27	107
MS.gene27827.t1	AT4G31550	47.222	108	50	1	26	133	203	303	6.26e-27	106
MS.gene27827.t1	AT2G30590	71.186	59	17	0	75	133	312	370	6.01e-26	104
MS.gene27827.t1	AT2G24570	52.222	90	36	1	44	133	218	300	1.59e-25	102
MS.gene27827.t1	AT4G31550	50.562	89	37	1	45	133	221	302	4.72e-25	101
MS.gene27827.t1	AT5G28650	43.802	121	59	2	18	138	213	324	1.84e-24	99.8
MS.gene27827.t1	AT3G04670	42.400	125	63	2	16	138	207	324	4.91e-24	98.6
MS.gene27827.t1	AT5G46350	55.072	69	30	1	77	145	184	251	5.46e-20	87.4
MS.gene27827.t1	AT2G04880	52.000	75	35	1	76	150	283	356	6.81e-20	88.2
MS.gene27827.t1	AT4G04450	60.656	61	24	0	76	136	198	258	6.87e-20	88.2
MS.gene27827.t1	AT2G04880	52.000	75	35	1	76	150	307	380	7.26e-20	88.6
MS.gene27827.t1	AT4G04450	60.656	61	24	0	76	136	292	352	8.06e-20	88.2
MS.gene27827.t1	AT1G62300	59.016	61	25	0	76	136	312	372	1.58e-19	87.4
MS.gene27827.t1	AT1G68150	56.923	65	28	0	76	140	235	299	1.99e-19	86.7
MS.gene27827.t1	AT4G22070	59.016	61	25	0	76	136	297	357	2.47e-19	87.0
MS.gene27827.t1	AT4G22070	59.016	61	25	0	76	136	297	357	2.47e-19	87.0
MS.gene27827.t1	AT4G22070	59.016	61	25	0	76	136	297	357	2.47e-19	87.0
MS.gene27827.t1	AT4G22070	59.016	61	25	0	76	136	297	357	2.47e-19	87.0
MS.gene27827.t1	AT5G15130	56.061	66	29	0	76	141	227	292	2.48e-19	87.0
MS.gene27827.t1	AT5G15130	56.061	66	29	0	76	141	185	250	3.10e-19	86.7
MS.gene27827.t1	AT4G01720	48.148	81	42	0	56	136	219	299	1.32e-18	84.7
MS.gene27827.t1	AT4G18170	56.452	62	26	1	77	138	173	233	2.98e-18	82.4
MS.gene27827.t1	AT1G29860	56.667	60	25	1	77	136	137	195	5.99e-18	81.3
MS.gene27827.t1	AT5G26170	55.172	58	25	1	77	134	114	170	6.26e-18	79.0
MS.gene27827.t1	AT5G45260	51.250	80	34	2	65	139	1194	1273	6.55e-18	83.2
MS.gene27827.t1	AT5G49520	51.613	62	29	1	77	138	222	282	8.21e-18	82.0
MS.gene27827.t1	AT4G31800	51.667	60	29	0	77	136	112	171	1.42e-17	79.7
MS.gene27827.t1	AT4G31800	51.667	60	29	0	77	136	177	236	1.93e-17	80.1
MS.gene27827.t1	AT4G26640	46.479	71	37	1	77	147	206	275	1.95e-17	80.9
MS.gene27827.t1	AT4G26640	46.479	71	37	1	77	147	206	275	1.95e-17	80.9
MS.gene27827.t1	AT4G26640	46.479	71	37	1	77	147	206	275	1.95e-17	80.9
MS.gene27827.t1	AT4G26640	46.479	71	37	1	77	147	206	275	1.95e-17	80.9
MS.gene27827.t1	AT1G13960	53.333	60	27	1	77	136	257	315	2.56e-17	80.5
MS.gene27827.t1	AT1G13960	50.794	63	29	2	74	136	74	134	2.46e-14	72.0
MS.gene27827.t1	AT2G25000	42.857	91	48	2	68	155	95	184	2.89e-17	78.6
MS.gene27827.t1	AT2G25000	42.857	91	48	2	68	155	95	184	2.89e-17	78.6
MS.gene27827.t1	AT4G26640	46.479	71	37	1	77	147	310	379	2.93e-17	80.9
MS.gene27827.t1	AT4G26640	46.479	71	37	1	77	147	382	451	3.05e-17	80.9
MS.gene27827.t1	AT2G03340	48.485	66	33	1	77	142	416	480	3.14e-17	80.9
MS.gene27827.t1	AT2G03340	41.463	82	46	2	71	152	245	324	5.36e-14	71.2
MS.gene27827.t1	AT4G26640	46.479	71	37	1	77	147	342	411	3.31e-17	80.9
MS.gene27827.t1	AT1G13960	53.333	60	27	1	77	136	410	468	3.46e-17	80.5
MS.gene27827.t1	AT1G13960	50.794	63	29	2	74	136	227	287	3.75e-14	71.6
MS.gene27827.t1	AT1G18860	55.738	61	27	0	76	136	239	299	4.42e-17	80.5
MS.gene27827.t1	AT2G25000	42.857	91	48	2	68	155	117	206	5.40e-17	78.2
MS.gene27827.t1	AT4G30935	53.968	63	28	1	77	139	332	393	6.28e-17	79.7
MS.gene27827.t1	AT2G38470	42.222	90	47	3	77	163	363	450	8.33e-17	79.7
MS.gene27827.t1	AT2G38470	48.333	60	29	2	77	136	185	242	2.05e-11	63.5
MS.gene27827.t1	AT2G25000	42.857	91	48	2	68	155	138	227	8.61e-17	77.8
MS.gene27827.t1	AT2G40740	46.835	79	37	2	69	142	166	244	4.35e-16	76.3
MS.gene27827.t1	AT2G40740	46.835	79	37	2	69	142	175	253	5.53e-16	75.9
MS.gene27827.t1	AT2G47260	48.387	62	31	1	77	138	175	235	1.19e-15	75.5
MS.gene27827.t1	AT3G62340	52.459	61	28	1	77	137	119	178	1.62e-15	74.3
MS.gene27827.t1	AT1G69310	34.711	121	65	3	21	133	89	203	1.77e-15	74.3
MS.gene27827.t1	AT1G69310	34.711	121	65	3	21	133	89	203	1.77e-15	74.3
MS.gene27827.t1	AT1G69310	34.711	121	65	3	21	133	89	203	1.77e-15	74.3
MS.gene27827.t1	AT2G46400	33.566	143	83	3	18	157	55	188	2.44e-15	74.3
MS.gene27827.t1	AT5G13080	44.118	68	35	2	77	144	68	132	6.77e-15	70.1
MS.gene27827.t1	AT5G07100	47.143	70	36	1	77	146	142	210	9.73e-15	71.2
MS.gene27827.t1	AT5G07100	45.588	68	36	1	71	138	19	85	4.92e-12	63.9
MS.gene27827.t1	AT5G07100	47.143	70	36	1	77	146	142	210	9.73e-15	71.2
MS.gene27827.t1	AT5G07100	45.588	68	36	1	71	138	19	85	4.92e-12	63.9
MS.gene27827.t1	AT5G07100	47.143	70	36	1	77	146	142	210	9.73e-15	71.2
MS.gene27827.t1	AT5G07100	45.588	68	36	1	71	138	19	85	4.92e-12	63.9
MS.gene27827.t1	AT5G07100	47.143	70	36	1	77	146	142	210	9.73e-15	71.2
MS.gene27827.t1	AT5G07100	45.588	68	36	1	71	138	19	85	4.92e-12	63.9
MS.gene27827.t1	AT2G37260	56.140	57	24	1	77	133	350	405	1.08e-14	73.2
MS.gene27827.t1	AT2G37260	51.667	60	27	2	77	136	166	223	2.36e-12	66.2
MS.gene27827.t1	AT5G56270	49.206	63	31	1	77	139	488	549	1.16e-14	73.6
MS.gene27827.t1	AT5G56270	50.794	63	29	2	74	136	271	331	1.36e-12	67.4
MS.gene27827.t1	AT2G37260	56.140	57	24	1	77	133	270	325	1.17e-14	72.8
MS.gene27827.t1	AT2G37260	51.667	60	27	2	77	136	86	143	3.13e-12	65.9
MS.gene27827.t1	AT2G37260	56.140	57	24	1	77	133	268	323	1.17e-14	72.8
MS.gene27827.t1	AT2G37260	51.667	60	27	2	77	136	84	141	3.20e-12	65.9
MS.gene27827.t1	AT1G80840	45.000	60	33	0	77	136	147	206	1.84e-14	71.6
MS.gene27827.t1	AT5G07100	47.143	70	36	1	77	146	235	303	2.05e-14	71.6
MS.gene27827.t1	AT5G07100	45.588	68	36	1	71	138	112	178	1.35e-11	63.5
MS.gene27827.t1	AT3G01080	50.000	60	29	1	77	136	307	365	2.23e-14	72.4
MS.gene27827.t1	AT3G01080	48.485	66	32	2	74	139	165	228	9.23e-14	70.5
MS.gene27827.t1	AT3G01080	50.000	60	29	1	77	136	345	403	2.29e-14	72.4
MS.gene27827.t1	AT3G01080	48.485	66	32	2	74	139	203	266	8.71e-14	70.5
MS.gene27827.t1	AT1G69810	49.206	63	31	1	76	137	203	265	3.33e-14	71.6
MS.gene27827.t1	AT2G21900	48.333	60	30	1	77	136	110	168	4.49e-14	69.3
MS.gene27827.t1	AT1G69810	49.206	63	31	1	76	137	145	207	4.86e-14	70.9
MS.gene27827.t1	AT2G30250	48.387	62	31	1	77	138	329	389	7.42e-14	70.5
MS.gene27827.t1	AT3G01080	48.485	66	32	2	74	139	203	266	9.06e-14	70.1
MS.gene27827.t1	AT4G26440	50.794	63	29	2	74	136	176	236	1.23e-13	70.5
MS.gene27827.t1	AT4G26440	41.176	68	39	1	77	144	373	439	3.12e-13	68.9
MS.gene27827.t1	AT4G11070	41.000	100	51	3	34	131	73	166	1.29e-13	69.3
MS.gene27827.t1	AT4G11070	41.000	100	51	3	34	131	105	198	1.32e-13	69.3
MS.gene27827.t1	AT3G01970	46.552	58	30	1	77	134	66	122	1.39e-13	66.6
MS.gene27827.t1	AT1G64000	44.928	69	35	2	77	145	115	180	1.69e-13	67.4
MS.gene27827.t1	AT5G43290	50.000	68	33	1	66	133	104	170	1.98e-13	68.6
MS.gene27827.t1	AT4G23810	41.176	85	48	1	74	156	156	240	3.58e-13	68.2
MS.gene27827.t1	AT1G55600	43.548	62	34	1	75	136	306	366	4.74e-13	68.6
MS.gene27827.t1	AT3G56400	44.286	70	33	2	77	140	121	190	4.91e-13	67.8
MS.gene27827.t1	AT1G66550	27.835	194	121	7	36	217	67	253	6.75e-13	66.6
MS.gene27827.t1	AT2G44745	50.877	57	27	1	77	133	146	201	7.11e-13	66.2
MS.gene27827.t1	AT5G41570	47.368	57	29	1	77	133	99	154	1.04e-12	65.1
MS.gene27827.t1	AT1G66550	28.042	189	122	6	36	217	67	248	1.48e-12	65.9
MS.gene27827.t1	AT2G46130	47.368	57	29	1	77	133	31	86	1.54e-12	62.8
MS.gene27827.t1	AT4G39410	50.000	58	28	1	77	134	224	280	2.37e-12	65.9
MS.gene27827.t1	AT1G66560	32.911	158	95	5	68	217	94	248	2.39e-12	65.1
MS.gene27827.t1	AT5G24110	41.558	77	42	2	77	151	114	189	2.77e-12	65.5
MS.gene27827.t1	AT5G64810	47.368	57	29	1	77	133	111	166	6.60e-12	63.2
MS.gene27827.t1	AT4G12020	45.902	61	31	2	76	136	468	526	1.36e-11	64.7
MS.gene27827.t1	AT4G12020	45.902	61	31	2	76	136	468	526	1.36e-11	64.7
MS.gene27827.t1	AT4G12020	45.902	61	31	2	76	136	468	526	1.45e-11	64.3
MS.gene27827.t1	AT4G12020	45.902	61	31	2	76	136	468	526	1.50e-11	64.3
MS.gene27827.t1	AT4G12020	45.902	61	31	2	76	136	468	526	1.63e-11	64.3
MS.gene27827.t1	AT4G12020	45.902	61	31	2	76	136	468	526	1.63e-11	64.3
MS.gene27827.t1	AT4G12020	45.902	61	31	2	76	136	401	459	1.76e-11	64.3
MS.gene27827.t1	AT4G12020	45.902	61	31	2	76	136	468	526	1.76e-11	64.3
MS.gene27827.t1	AT4G12020	45.902	61	31	2	76	136	468	526	1.76e-11	64.3
MS.gene27827.t1	AT4G12020	45.902	61	31	2	76	136	468	526	1.77e-11	64.3
MS.gene27827.t1	AT4G12020	45.902	61	31	2	76	136	468	526	2.05e-11	63.9
MS.gene27827.t1	AT2G40750	36.842	95	44	3	77	169	153	233	2.06e-11	63.2
MS.gene27827.t1	AT5G01900	39.326	89	50	3	46	131	80	167	4.55e-11	61.6

Find 87 sgRNAs with CRISPR-Local

Find 113 sgRNAs with CRISPR-GE

CRISPR-Local

CRISPR-Local
sgRNA_sequence	on_target_score	Position	Region
CACAAAGTCATCAGCTATTC+TGG	0.225693	4.1:-13374305	MS.gene27827:CDS
CTTTCTACTTGTTTCCTTGC+TGG	0.265929	4.1:+13374514	None:intergenic
CCTCATGGATCAAGGCTAAA+AGG	0.300291	4.1:-13374858	MS.gene27827:CDS
ATCCATGAGGTTCCTTGATT+GGG	0.305299	4.1:+13374871	None:intergenic
TGCTGACCTTGGAGAGTTGC+CGG	0.311039	4.1:-13374203	MS.gene27827:CDS
GATCCATGAGGTTCCTTGAT+TGG	0.323279	4.1:+13374870	None:intergenic
GGGTTCGACCGGGGCTGGTT+CGG	0.336758	4.1:+13374390	None:intergenic
GGGATAAGGGGAACCTTTGA+TGG	0.344969	4.1:+13374779	None:intergenic
TCATGGGCATGGAGAAAATA+TGG	0.349799	4.1:-13374810	MS.gene27827:CDS
TTGGTCTTGGACGACGAGTT+GGG	0.371032	4.1:-13374346	MS.gene27827:CDS
TAGATACATACCTGGGATAA+GGG	0.383161	4.1:+13374766	None:intergenic
ATTTGCAGGCCACTTGGTCT+TGG	0.387001	4.1:-13374359	MS.gene27827:CDS
GACGACGAGTTGGGGTGGTT+GGG	0.391485	4.1:-13374337	MS.gene27827:CDS
GGACGACGAGTTGGGGTGGT+TGG	0.399879	4.1:-13374338	MS.gene27827:CDS
CGGAGTGTTCTACGGTGTTC+CGG	0.400890	4.1:-13374183	MS.gene27827:CDS
TCATCGGGTTCGACCGGGGC+TGG	0.415664	4.1:+13374385	None:intergenic
TCTTCCTCTTGGTGAGTATG+TGG	0.417393	4.1:+13375175	None:intergenic
CTTCTTCTTCATCTAAGAAA+AGG	0.422707	4.1:-13375081	MS.gene27827:intron
GGATGCACGACGGCGGTTAA+CGG	0.424783	4.1:-13374149	MS.gene27827:CDS
GGTGTTCCGGCATGGGTTGT+TGG	0.425026	4.1:-13374170	MS.gene27827:CDS
GTTCTACGGTGTTCCGGCAT+GGG	0.431598	4.1:-13374177	MS.gene27827:CDS
AATTTCTCATCGGGTTCGAC+CGG	0.432573	4.1:+13374379	None:intergenic
TGTTCTACGGTGTTCCGGCA+TGG	0.440211	4.1:-13374178	MS.gene27827:CDS
CTTAGATGAAGAAGAAGAGT+GGG	0.440432	4.1:+13375087	None:intergenic
TGGCCTGCAAATTTCTCATC+GGG	0.444805	4.1:+13374370	None:intergenic
ATAGATACATACCTGGGATA+AGG	0.445045	4.1:+13374765	None:intergenic
TATTCTGGAGAGTCAGATAA+TGG	0.451033	4.1:-13374290	MS.gene27827:CDS
ATACACCACCTTCAGATTCA+TGG	0.466621	4.1:-13374827	MS.gene27827:CDS
TAGGTTATGATGAGCATTGT+GGG	0.473501	4.1:+13374478	None:intergenic
GCAGGCGAGCCATACAGAAA+AGG	0.475140	4.1:-13374905	MS.gene27827:CDS
CGGTTAACGGCTCCATGGTG+TGG	0.482047	4.1:-13374136	MS.gene27827:CDS
CTTCCTCTTGGTGAGTATGT+GGG	0.486025	4.1:+13375176	None:intergenic
TCCACCTCATTTAACATCGA+TGG	0.489302	4.1:-13375121	MS.gene27827:CDS
ATTTCTCATCGGGTTCGACC+GGG	0.491991	4.1:+13374380	None:intergenic
GAACCCGATGAGAAATTTGC+AGG	0.498994	4.1:-13374373	MS.gene27827:CDS
CGACCACAACCATGCATGGC+CGG	0.500097	4.1:-13374449	MS.gene27827:CDS
CAGGCGAGCCATACAGAAAA+GGG	0.520309	4.1:-13374904	MS.gene27827:CDS
ATATGTCAGTGTCTTCCTCT+TGG	0.521357	4.1:+13375164	None:intergenic
ATGGTTGTGGTCGGAGGAGT+AGG	0.522047	4.1:+13374459	None:intergenic
AAACCGGCCATGCATGGTTG+TGG	0.522229	4.1:+13374446	None:intergenic
CTTGGTCTTGGACGACGAGT+TGG	0.523055	4.1:-13374347	MS.gene27827:CDS
TCAAGGAACCTCATGGATCA+AGG	0.523927	4.1:-13374866	MS.gene27827:CDS
GGATAAGGGGAACCTTTGAT+GGG	0.524871	4.1:+13374780	None:intergenic
CAAGAAAACCGAACCAGCCC+CGG	0.525073	4.1:-13374398	MS.gene27827:CDS
TACACCACCTTCAGATTCAT+GGG	0.529082	4.1:-13374826	MS.gene27827:CDS
AACTCATCCTCTTCCTTCAT+CGG	0.530929	4.1:+13374232	None:intergenic
TGAGAAATTTGCAGGCCACT+TGG	0.533764	4.1:-13374365	MS.gene27827:CDS
AGAGTTGCCGGAGTGTTCTA+CGG	0.541445	4.1:-13374191	MS.gene27827:CDS
ATGTTAAATGAGGTGGAAGA+AGG	0.543531	4.1:+13375127	None:intergenic
ACATGTACAGAGCGTACTAC+AGG	0.553074	4.1:-13374558	MS.gene27827:intron
CTCCATGCCCATGAATCTGA+AGG	0.553726	4.1:+13374819	None:intergenic
CCATGCATGGTTGTGGTCGG+AGG	0.558720	4.1:+13374453	None:intergenic
GGTGGTGCAAATCCCAATCA+AGG	0.559751	4.1:-13374883	MS.gene27827:CDS
GTGGCCTGCAAATTTCTCAT+CGG	0.563399	4.1:+13374369	None:intergenic
AACACTCCGGCAACTCTCCA+AGG	0.568073	4.1:+13374197	None:intergenic
CACCTTCAGATTCATGGGCA+TGG	0.568381	4.1:-13374821	MS.gene27827:CDS
ATCCCAATCAAGGAACCTCA+TGG	0.568792	4.1:-13374873	MS.gene27827:CDS
AGATACATACCTGGGATAAG+GGG	0.569504	4.1:+13374767	None:intergenic
GGTTAACGGCTCCATGGTGT+GGG	0.571388	4.1:-13374135	MS.gene27827:CDS
TCTTAGATGAAGAAGAAGAG+TGG	0.575037	4.1:+13375086	None:intergenic
GCCATCGATGTTAAATGAGG+TGG	0.577013	4.1:+13375120	None:intergenic
AAATGAGGTGGAAGAAGGAG+TGG	0.577175	4.1:+13375132	None:intergenic
TGGTCTTGGACGACGAGTTG+GGG	0.578175	4.1:-13374345	MS.gene27827:CDS
GACGGCGGTTAACGGCTCCA+TGG	0.581883	4.1:-13374141	MS.gene27827:CDS
GGCACCAATTTGTCAAGATG+TGG	0.584006	4.1:+13374111	None:intergenic
CGGCCATGCATGGTTGTGGT+CGG	0.586326	4.1:+13374450	None:intergenic
TCAAAGGTTCCCCTTATCCC+AGG	0.588131	4.1:-13374776	MS.gene27827:intron
CCTCCGACCACAACCATGCA+TGG	0.604364	4.1:-13374453	MS.gene27827:CDS
GTGCATCCAACAACCCATGC+CGG	0.607976	4.1:+13374164	None:intergenic
TACAGGTGTAGCAGTTGCAA+AGG	0.608307	4.1:-13374541	MS.gene27827:CDS
GTTGCAAAGGTTGTCCAGCA+AGG	0.619353	4.1:-13374528	MS.gene27827:CDS
TTTCTCATCGGGTTCGACCG+GGG	0.622876	4.1:+13374381	None:intergenic
CAAGATGTGGTCCCACACCA+TGG	0.624105	4.1:+13374124	None:intergenic
TCTTGGACGACGAGTTGGGG+TGG	0.624256	4.1:-13374342	MS.gene27827:CDS
TGAGCATTGTGGGGTCCACA+CGG	0.625449	4.1:+13374488	None:intergenic
GTAGGTTATGATGAGCATTG+TGG	0.629285	4.1:+13374477	None:intergenic
GGCAGAGTTTGATGCTGACA+TGG	0.638682	4.1:-13374269	MS.gene27827:CDS
AAACCCACATACTCACCAAG+AGG	0.655223	4.1:-13375179	MS.gene27827:CDS
CGGAACACCGTAGAACACTC+CGG	0.678431	4.1:+13374184	None:intergenic
ACTCGTCGTCCAAGACCAAG+TGG	0.678707	4.1:+13374350	None:intergenic
ATGGGTTGTTGGATGCACGA+CGG	0.688177	4.1:-13374159	MS.gene27827:CDS
TGAGCCATCGATGTTAAATG+AGG	0.693765	4.1:+13375117	None:intergenic
AGGTTATGATGAGCATTGTG+GGG	0.698729	4.1:+13374479	None:intergenic
GGTTGTTGGATGCACGACGG+CGG	0.704353	4.1:-13374156	MS.gene27827:CDS
GCGAGCCATACAGAAAAGGG+TGG	0.704599	4.1:-13374901	MS.gene27827:CDS
ACAAGTAGAAAGAAGCCGTG+TGG	0.704739	4.1:-13374503	MS.gene27827:CDS
CATGCCCATGAATCTGAAGG+TGG	0.710222	4.1:+13374822	None:intergenic

CRISPR-GE

badsite warning	sgRNA_sequence	Strand	Position	Region	GC_content
!!	CATTAGGAAATATAATTAAT+TGG	+	chr4.1:13374301-13374320	None:intergenic	15.0%
!!!	AAGTATATTTGGTAATTTTA+AGG	-	chr4.1:13374680-13374699	MS.gene27827:intron	15.0%
!!	AATTATGGTCATTAATCATT+AGG	+	chr4.1:13374317-13374336	None:intergenic	20.0%
!!	GGAAATATAATTAATTGGAT+TGG	+	chr4.1:13374296-13374315	None:intergenic	20.0%
!!	TTTGTATATATTGTTAAAGC+AGG	-	chr4.1:13374396-13374415	MS.gene27827:CDS	20.0%
!	ACATTTATAGATACATACCT+GGG	+	chr4.1:13374563-13374582	None:intergenic	25.0%
!	TACATTTATAGATACATACC+TGG	+	chr4.1:13374564-13374583	None:intergenic	25.0%
!	TAGATCATGACAAGTATATT+TGG	-	chr4.1:13374669-13374688	MS.gene27827:intron	25.0%
!!	ATTTTGTAACATCTCAAGAT+CGG	+	chr4.1:13374354-13374373	None:intergenic	25.0%
	AAGTAGAAGAAACTGAAAGT+AGG	-	chr4.1:13374712-13374731	MS.gene27827:intron	30.0%
	CTTCTTCTTCATCTAAGAAA+AGG	-	chr4.1:13374238-13374257	MS.gene27827:CDS	30.0%
!!!	CTTGTTGTAGTTTTTGAAAC+CGG	+	chr4.1:13374892-13374911	None:intergenic	30.0%
	ATAGATACATACCTGGGATA+AGG	+	chr4.1:13374557-13374576	None:intergenic	35.0%
	ATGTTAAATGAGGTGGAAGA+AGG	+	chr4.1:13374195-13374214	None:intergenic	35.0%
	CTTAGATGAAGAAGAAGAGT+GGG	+	chr4.1:13374235-13374254	None:intergenic	35.0%
	TAGATACATACCTGGGATAA+GGG	+	chr4.1:13374556-13374575	None:intergenic	35.0%
	TCTTAGATGAAGAAGAAGAG+TGG	+	chr4.1:13374236-13374255	None:intergenic	35.0%
!	GATTGAGTAGTGGGAAATTA+TGG	+	chr4.1:13374332-13374351	None:intergenic	35.0%
!	GTTTTGTCTGTGTGTGAATT+GGG	-	chr4.1:13374738-13374757	MS.gene27827:intron	35.0%
!	TAGGTTATGATGAGCATTGT+GGG	+	chr4.1:13374844-13374863	None:intergenic	35.0%
!	TATTCTGGAGAGTCAGATAA+TGG	-	chr4.1:13375029-13375048	MS.gene27827:intron	35.0%
!	TGTTTTGTCTGTGTGTGAAT+TGG	-	chr4.1:13374737-13374756	MS.gene27827:intron	35.0%
	AACTCATCCTCTTCCTTCAT+CGG	+	chr4.1:13375090-13375109	None:intergenic	40.0%
	AGATACATACCTGGGATAAG+GGG	+	chr4.1:13374555-13374574	None:intergenic	40.0%
	ATACACCACCTTCAGATTCA+TGG	-	chr4.1:13374492-13374511	MS.gene27827:CDS	40.0%
	ATATGTCAGTGTCTTCCTCT+TGG	+	chr4.1:13374158-13374177	None:intergenic	40.0%
	ATCCATGAGGTTCCTTGATT+GGG	+	chr4.1:13374451-13374470	None:intergenic	40.0%
	CACAAAGTCATCAGCTATTC+TGG	-	chr4.1:13375014-13375033	MS.gene27827:intron	40.0%
	CTTTCTACTTGTTTCCTTGC+TGG	+	chr4.1:13374808-13374827	None:intergenic	40.0%
	TACACCACCTTCAGATTCAT+GGG	-	chr4.1:13374493-13374512	MS.gene27827:CDS	40.0%
	TATGGCCAAAAACCCATCAA+AGG	-	chr4.1:13374527-13374546	MS.gene27827:CDS	40.0%
	TCAAGATCGGATTGAGTAGT+GGG	+	chr4.1:13374341-13374360	None:intergenic	40.0%
	TCATGGGCATGGAGAAAATA+TGG	-	chr4.1:13374509-13374528	MS.gene27827:CDS	40.0%
	TCCACCTCATTTAACATCGA+TGG	-	chr4.1:13374198-13374217	MS.gene27827:CDS	40.0%
	TGAGCCATCGATGTTAAATG+AGG	+	chr4.1:13374205-13374224	None:intergenic	40.0%
	TTCCTTCATCGGCAAAAACA+CGG	+	chr4.1:13375079-13375098	None:intergenic	40.0%
!	AGGTTATGATGAGCATTGTG+GGG	+	chr4.1:13374843-13374862	None:intergenic	40.0%
!	GTAGGTTATGATGAGCATTG+TGG	+	chr4.1:13374845-13374864	None:intergenic	40.0%
	AAACCCACATACTCACCAAG+AGG	-	chr4.1:13374140-13374159	MS.gene27827:CDS	45.0%
	AAATGAGGTGGAAGAAGGAG+TGG	+	chr4.1:13374190-13374209	None:intergenic	45.0%
	AATTTCTCATCGGGTTCGAC+CGG	+	chr4.1:13374943-13374962	None:intergenic	45.0%
	ACAAGTAGAAAGAAGCCGTG+TGG	-	chr4.1:13374816-13374835	MS.gene27827:CDS	45.0%
	ACATGTACAGAGCGTACTAC+AGG	-	chr4.1:13374761-13374780	MS.gene27827:intron	45.0%
	ATCCCAATCAAGGAACCTCA+TGG	-	chr4.1:13374446-13374465	MS.gene27827:CDS	45.0%
	CCTCATGGATCAAGGCTAAA+AGG	-	chr4.1:13374461-13374480	MS.gene27827:CDS	45.0%
	CTCAAGATCGGATTGAGTAG+TGG	+	chr4.1:13374342-13374361	None:intergenic	45.0%
	CTTCCTCTTGGTGAGTATGT+GGG	+	chr4.1:13374146-13374165	None:intergenic	45.0%
	GAACCCGATGAGAAATTTGC+AGG	-	chr4.1:13374946-13374965	MS.gene27827:intron	45.0%
	GATCCATGAGGTTCCTTGAT+TGG	+	chr4.1:13374452-13374471	None:intergenic	45.0%
	GCCATCGATGTTAAATGAGG+TGG	+	chr4.1:13374202-13374221	None:intergenic	45.0%
	GGATAAGGGGAACCTTTGAT+GGG	+	chr4.1:13374542-13374561	None:intergenic	45.0%
	GTGGCCTGCAAATTTCTCAT+CGG	+	chr4.1:13374953-13374972	None:intergenic	45.0%
	TACAGGTGTAGCAGTTGCAA+AGG	-	chr4.1:13374778-13374797	MS.gene27827:CDS	45.0%
	TCAAGGAACCTCATGGATCA+AGG	-	chr4.1:13374453-13374472	MS.gene27827:CDS	45.0%
	TCTTCCTCTTGGTGAGTATG+TGG	+	chr4.1:13374147-13374166	None:intergenic	45.0%
	TGAGAAATTTGCAGGCCACT+TGG	-	chr4.1:13374954-13374973	MS.gene27827:intron	45.0%
	TGGCCTGCAAATTTCTCATC+GGG	+	chr4.1:13374952-13374971	None:intergenic	45.0%
!	GTTTTTGCCGATGAAGGAAG+AGG	-	chr4.1:13375080-13375099	MS.gene27827:intron	45.0%
!	TTGCACCACCCTTTTCTGTA+TGG	+	chr4.1:13374426-13374445	None:intergenic	45.0%
!!!	CCTTTTAGCCTTGATCCATG+AGG	+	chr4.1:13374464-13374483	None:intergenic	45.0%
!!!	GAGTTGCTTTTTGCTGACCT+TGG	-	chr4.1:13375105-13375124	MS.gene27827:CDS	45.0%
!!!	GGGAACCTTTGATGGGTTTT+TGG	+	chr4.1:13374535-13374554	None:intergenic	45.0%
!!!	TTTTTGAAACCGGCCATGCA+TGG	+	chr4.1:13374882-13374901	None:intergenic	45.0%
	ATTTCTCATCGGGTTCGACC+GGG	+	chr4.1:13374942-13374961	None:intergenic	50.0%
	ATTTGCAGGCCACTTGGTCT+TGG	-	chr4.1:13374960-13374979	MS.gene27827:intron	50.0%
	CACCTTCAGATTCATGGGCA+TGG	-	chr4.1:13374498-13374517	MS.gene27827:CDS	50.0%
	CAGGCGAGCCATACAGAAAA+GGG	-	chr4.1:13374415-13374434	MS.gene27827:CDS	50.0%
	CATGCCCATGAATCTGAAGG+TGG	+	chr4.1:13374500-13374519	None:intergenic	50.0%
	CTCCATGCCCATGAATCTGA+AGG	+	chr4.1:13374503-13374522	None:intergenic	50.0%
	GGCAGAGTTTGATGCTGACA+TGG	-	chr4.1:13375050-13375069	MS.gene27827:intron	50.0%
	GGGATAAGGGGAACCTTTGA+TGG	+	chr4.1:13374543-13374562	None:intergenic	50.0%
	GGTGGTGCAAATCCCAATCA+AGG	-	chr4.1:13374436-13374455	MS.gene27827:CDS	50.0%
	GTTGCAAAGGTTGTCCAGCA+AGG	-	chr4.1:13374791-13374810	MS.gene27827:CDS	50.0%
	TCAAAGGTTCCCCTTATCCC+AGG	-	chr4.1:13374543-13374562	MS.gene27827:CDS	50.0%
!	AGAGTTGCCGGAGTGTTCTA+CGG	-	chr4.1:13375128-13375147	MS.gene27827:CDS	50.0%
!	ATGGGTTGTTGGATGCACGA+CGG	-	chr4.1:13375160-13375179	MS.gene27827:CDS	50.0%
!!	GTCCGTGTTTTTGCCGATGA+AGG	-	chr4.1:13375074-13375093	MS.gene27827:intron	50.0%
!!	TTGGTCTTGGACGACGAGTT+GGG	-	chr4.1:13374973-13374992	MS.gene27827:intron	50.0%
!!!	GGCTGGTTCGGTTTTCTTGA+GGG	+	chr4.1:13374920-13374939	None:intergenic	50.0%
	AAACCGGCCATGCATGGTTG+TGG	+	chr4.1:13374876-13374895	None:intergenic	55.0%
	AACACTCCGGCAACTCTCCA+AGG	+	chr4.1:13375125-13375144	None:intergenic	55.0%
	ACTCGTCGTCCAAGACCAAG+TGG	+	chr4.1:13374972-13374991	None:intergenic	55.0%
	ATGGTTGTGGTCGGAGGAGT+AGG	+	chr4.1:13374863-13374882	None:intergenic	55.0%
	CAAGAAAACCGAACCAGCCC+CGG	-	chr4.1:13374921-13374940	MS.gene27827:intron	55.0%
	CAAGATGTGGTCCCACACCA+TGG	+	chr4.1:13375198-13375217	None:intergenic	55.0%
	CGGAACACCGTAGAACACTC+CGG	+	chr4.1:13375138-13375157	None:intergenic	55.0%
	GCAGGCGAGCCATACAGAAA+AGG	-	chr4.1:13374414-13374433	MS.gene27827:CDS	55.0%
	GCGAGCCATACAGAAAAGGG+TGG	-	chr4.1:13374418-13374437	MS.gene27827:CDS	55.0%
	GGTTAACGGCTCCATGGTGT+GGG	-	chr4.1:13375184-13375203	MS.gene27827:CDS	55.0%
	GTGCATCCAACAACCCATGC+CGG	+	chr4.1:13375158-13375177	None:intergenic	55.0%
	GTTCTACGGTGTTCCGGCAT+GGG	-	chr4.1:13375142-13375161	MS.gene27827:CDS	55.0%
	TGCTGACCTTGGAGAGTTGC+CGG	-	chr4.1:13375116-13375135	MS.gene27827:CDS	55.0%
	TGTTCTACGGTGTTCCGGCA+TGG	-	chr4.1:13375141-13375160	MS.gene27827:CDS	55.0%
	TTTCTCATCGGGTTCGACCG+GGG	+	chr4.1:13374941-13374960	None:intergenic	55.0%
!	CGGAGTGTTCTACGGTGTTC+CGG	-	chr4.1:13375136-13375155	MS.gene27827:CDS	55.0%
!	TGAGCATTGTGGGGTCCACA+CGG	+	chr4.1:13374834-13374853	None:intergenic	55.0%
!	TGGTCTTGGACGACGAGTTG+GGG	-	chr4.1:13374974-13374993	MS.gene27827:intron	55.0%
!!	CTTGGTCTTGGACGACGAGT+TGG	-	chr4.1:13374972-13374991	MS.gene27827:intron	55.0%
!!!	GGGCTGGTTCGGTTTTCTTG+AGG	+	chr4.1:13374921-13374940	None:intergenic	55.0%
	CCATGCATGGTTGTGGTCGG+AGG	+	chr4.1:13374869-13374888	None:intergenic	60.0%
	CCTCCGACCACAACCATGCA+TGG	-	chr4.1:13374866-13374885	MS.gene27827:CDS	60.0%
	CGACCACAACCATGCATGGC+CGG	-	chr4.1:13374870-13374889	MS.gene27827:CDS	60.0%
	CGGCCATGCATGGTTGTGGT+CGG	+	chr4.1:13374872-13374891	None:intergenic	60.0%
	CGGTTAACGGCTCCATGGTG+TGG	-	chr4.1:13375183-13375202	MS.gene27827:CDS	60.0%
	GGATGCACGACGGCGGTTAA+CGG	-	chr4.1:13375170-13375189	MS.gene27827:CDS	60.0%
	GGTTGTTGGATGCACGACGG+CGG	-	chr4.1:13375163-13375182	MS.gene27827:CDS	60.0%
!	GACGACGAGTTGGGGTGGTT+GGG	-	chr4.1:13374982-13375001	MS.gene27827:intron	60.0%
!	GGTGTTCCGGCATGGGTTGT+TGG	-	chr4.1:13375149-13375168	MS.gene27827:CDS	60.0%
!	TCTTGGACGACGAGTTGGGG+TGG	-	chr4.1:13374977-13374996	MS.gene27827:intron	60.0%
	GACGGCGGTTAACGGCTCCA+TGG	-	chr4.1:13375178-13375197	MS.gene27827:CDS	65.0%
!	GGACGACGAGTTGGGGTGGT+TGG	-	chr4.1:13374981-13375000	MS.gene27827:intron	65.0%
	TCATCGGGTTCGACCGGGGC+TGG	+	chr4.1:13374937-13374956	None:intergenic	70.0%
!!	GGGTTCGACCGGGGCTGGTT+CGG	+	chr4.1:13374932-13374951	None:intergenic	70.0%

Chromosome	Type	Strat	End	Strand	Name
chr4.1	gene	13374123	13375218	13374123	ID=MS.gene27827
chr4.1	mRNA	13374123	13375218	13374123	ID=MS.gene27827.t1;Parent=MS.gene27827
chr4.1	exon	13375082	13375218	13375082	ID=MS.gene27827.t1.exon1;Parent=MS.gene27827.t1
chr4.1	CDS	13375082	13375218	13375082	ID=cds.MS.gene27827.t1;Parent=MS.gene27827.t1
chr4.1	exon	13374777	13374926	13374777	ID=MS.gene27827.t1.exon2;Parent=MS.gene27827.t1
chr4.1	CDS	13374777	13374926	13374777	ID=cds.MS.gene27827.t1;Parent=MS.gene27827.t1
chr4.1	exon	13374123	13374570	13374123	ID=MS.gene27827.t1.exon3;Parent=MS.gene27827.t1
chr4.1	CDS	13374123	13374570	13374123	ID=cds.MS.gene27827.t1;Parent=MS.gene27827.t1

Gene Sequence

>MS.gene27827

ATGAAAAGAAAATTCAAAAACCCACATACTCACCAAGAGGAAGACACTGACATATCTCAAGATTCCACTCCTTCTTCCACCTCATTTAACATCGATGGCTCAGTCACTTCCCACTCTTCTTCTTCATCTAAGAAAAGGTTAGTACACACACTTATACTCTAATTACACATCCAATCCAATTAATTATATTTCCTAATGATTAATGACCATAATTTCCCACTACTCAATCCGATCTTGAGATGTTACAAAATTAAAAATAATAATCTGAATTGTTTTGTATATATTGTTAAAGCAGGCGAGCCATACAGAAAAGGGTGGTGCAAATCCCAATCAAGGAACCTCATGGATCAAGGCTAAAAGGAGAGAGTAATACACCACCTTCAGATTCATGGGCATGGAGAAAATATGGCCAAAAACCCATCAAAGGTTCCCCTTATCCCAGGTATGTATCTATAAATGTAATCTAATGTAATGTAGCAACTAATTAAATATACTGATATAGTCATGTAAAATAAAAATAAATCATTTTATTGCATCTTATATGTTTAGATCATGACAAGTATATTTGGTAATTTTAAGGTTTGTGTGAAAGTAGAAGAAACTGAAAGTAGGTTTGTTTTGTCTGTGTGTGAATTGGGACATGTACAGAGCGTACTACAGGTGTAGCAGTTGCAAAGGTTGTCCAGCAAGGAAACAAGTAGAAAGAAGCCGTGTGGACCCCACAATGCTCATCATAACCTACTCCTCCGACCACAACCATGCATGGCCGGTTTCAAAAACTACAACAAGACTCTCCCTCAAGAAAACCGAACCAGCCCCGGTCGAACCCGATGAGAAATTTGCAGGCCACTTGGTCTTGGACGACGAGTTGGGGTGGTTGGGAGAGATAGACACAAAGTCATCAGCTATTCTGGAGAGTCAGATAATGGCAGAGTTTGATGCTGACATGGCGTCCGTGTTTTTGCCGATGAAGGAAGAGGATGAGTTGCTTTTTGCTGACCTTGGAGAGTTGCCGGAGTGTTCTACGGTGTTCCGGCATGGGTTGTTGGATGCACGACGGCGGTTAACGGCTCCATGGTGTGGGACCACATCTTGA

Protein sequence

>MS.gene27827.t1

MKRKFKNPHTHQEEDTDISQDSTPSSTSFNIDGSVTSHSSSSSKKSRRAIQKRVVQIPIKEPHGSRLKGESNTPPSDSWAWRKYGQKPIKGSPYPRAYYRCSSCKGCPARKQVERSRVDPTMLIITYSSDHNHAWPVSKTTTRLSLKKTEPAPVEPDEKFAGHLVLDDELGWLGEIDTKSSAILESQIMAEFDADMASVFLPMKEEDELLFADLGELPECSTVFRHGLLDARRRLTAPWCGTTS